AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0912110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0912110 MtrunA17_Chr6g0465161 80.255 471 26 6 2 439 274 710 0.0 719
Msa0912110 MtrunA17_Chr7g0230671 30.829 386 174 8 2 339 286 626 5.28e-51 183
Msa0912110 MtrunA17_Chr1g0169361 29.287 519 223 18 2 439 329 784 1.31e-48 177
Msa0912110 MtrunA17_Chr4g0012061 30.808 396 177 11 2 345 298 648 5.20e-48 175
Msa0912110 MtrunA17_Chr3g0136721 28.726 369 165 9 3 306 280 615 3.74e-34 135
Msa0912110 MtrunA17_Chr1g0148121 28.620 297 139 5 1 256 277 541 6.44e-33 131
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0912110 AT1G71810.1 54.661 472 136 9 2 439 265 692 5.46e-159 465
Msa0912110 AT1G79600.1 33.051 354 153 6 2 314 293 603 7.63e-51 183
Msa0912110 AT3G24190.1 30.068 439 187 14 2 356 337 739 2.59e-47 174
Msa0912110 AT5G24970.3 30.239 377 157 11 3 306 282 625 1.33e-35 140
Msa0912110 AT5G24970.1 30.239 377 157 11 3 306 279 622 1.46e-35 139
Msa0912110 AT5G24970.2 30.239 377 157 11 3 306 321 664 2.46e-35 139
Msa0912110 AT4G31390.3 30.640 297 133 4 1 256 114 378 1.19e-34 135
Msa0912110 AT4G31390.1 30.640 297 133 4 1 256 313 577 8.41e-34 134
Msa0912110 AT4G31390.2 31.274 259 105 4 39 256 326 552 4.78e-30 123
Msa0912110 AT3G07700.3 29.319 191 79 5 2 169 335 492 2.92e-14 75.5
Msa0912110 AT3G07700.1 29.319 191 79 5 2 169 335 492 3.11e-14 75.5
Msa0912110 AT3G07700.2 29.319 191 79 5 2 169 335 492 3.11e-14 75.5
Msa0912110 AT3G07700.4 29.319 191 79 5 2 169 335 492 3.11e-14 75.5

Find 186 sgRNAs with CRISPR-Local

Find 658 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCTTGTAAATCGTGATTT+TGG 0.195023 6_2:-19964873 Msa0912110:CDS
CGCCTTATGCTATTGCTATC+AGG 0.198889 6_2:-19962879 Msa0912110:CDS
ATATCTTCTTCGGTCATTAA+AGG 0.212242 6_2:+19962924 None:intergenic
ATGATAGCTTGAGATGTTTC+AGG 0.214882 6_2:-19971707 Msa0912110:intron
TACTAAGGTCTTATCTGTTT+TGG 0.221799 6_2:+19963360 None:intergenic
CCCTCAGCTTAGATCTTCTT+TGG 0.222220 6_2:-19963959 Msa0912110:CDS
CCTGTTGCTGCTGCTTCTCT+TGG 0.226552 6_2:-19968923 Msa0912110:five_prime_UTR
AAGAAGATATAGTCAATTTA+AGG 0.232775 6_2:-19962911 Msa0912110:CDS
TGGAGAAATGGAAGTTATTA+TGG 0.243042 6_2:+19972336 None:intergenic
TTTGGAGAATCTTCTTTATA+AGG 0.244527 6_2:-19963941 Msa0912110:intron
GATGGCAAATTAGCTTATTT+AGG 0.253896 6_2:-19965623 Msa0912110:intron
TTAGGTATAAATTCAAGTTT+AGG 0.308935 6_2:-19964191 Msa0912110:intron
TGCACTTGGGCTTGCTTCCT+TGG 0.320437 6_2:-19962991 Msa0912110:CDS
CCGAGTACAGTATTTGATTC+TGG 0.326284 6_2:+19962319 None:intergenic
AAAATTGAATACTGATCTTC+AGG 0.330649 6_2:-19968638 Msa0912110:intron
AATAAATAGAGAATGCAATT+TGG 0.337819 6_2:-19961741 Msa0912110:three_prime_UTR
GCGAAGACGGTTAGAGGAAT+TGG 0.339272 6_2:+19972161 None:intergenic
AACCAATGCATACCCGAAAA+AGG 0.340165 6_2:+19967724 None:intergenic
AAAGCAACTTCTGTGGAAAA+TGG 0.340590 6_2:+19969010 None:intergenic
TCACACTGTTAGCCGTCTAA+TGG 0.348279 6_2:-19961843 Msa0912110:three_prime_UTR
GTTCAAACTGGAATCGCGTT+TGG 0.350909 6_2:-19971946 Msa0912110:five_prime_UTR
ATCGCGTTTGGGAAGTGGTT+TGG 0.352457 6_2:-19971934 Msa0912110:five_prime_UTR
GCTACGGACTTTGTCACTCT+TGG 0.357692 6_2:-19964843 Msa0912110:CDS
TTGGAGATGGAGAAGTTAGT+TGG 0.358662 6_2:+19972180 None:intergenic
GACTCGTTTACGGCAAAGTC+AGG 0.358723 6_2:-19972078 Msa0912110:five_prime_UTR
TGTCTGTAGCCTTGCTGTAC+TGG 0.361463 6_2:-19964070 Msa0912110:CDS
GGAAGCGGTGGTGGTGCATT+TGG 0.365254 6_2:+19972116 None:intergenic
TTGGGAAGTGGTTTGGATTG+AGG 0.367601 6_2:-19971927 Msa0912110:five_prime_UTR
AATAATTGCTGCTGGGATTC+CGG 0.377025 6_2:+19962084 None:intergenic
CACACCCTGGAAATCTTCTT+AGG 0.378467 6_2:-19965652 Msa0912110:CDS
TGGAGATGGAGAAGTTAGTT+GGG 0.385087 6_2:+19972181 None:intergenic
GAGGGAAATGAGAGAGAAGT+TGG 0.387401 6_2:+19972213 None:intergenic
TAAATTGACTATATCTTCTT+CGG 0.387717 6_2:+19962914 None:intergenic
AACTCTAGAAGATATATCTA+AGG 0.389848 6_2:-19965021 Msa0912110:intron
ATTTCAATTGCCAGCTAACT+TGG 0.391080 6_2:-19962064 Msa0912110:CDS
GATGTCCTAAGAAGATTTCC+AGG 0.391118 6_2:+19965647 None:intergenic
TCGAGCGGATGAGATGTTTC+AGG 0.394314 6_2:-19971884 Msa0912110:five_prime_UTR
TTTCCGCTTCCGACGCGCTT+AGG 0.395233 6_2:+19972043 None:intergenic
TCACCTGTCATGCCAAAATC+TGG 0.395360 6_2:+19964939 None:intergenic
TGAAGAAGGTGGTTATGGTT+GGG 0.397769 6_2:+19972311 None:intergenic
CTACGGACTTTGTCACTCTT+GGG 0.399542 6_2:-19964842 Msa0912110:intron
ACGGCGGCGAAGACGGTTAG+AGG 0.400648 6_2:+19972155 None:intergenic
TATGGTTGGGATTGGAGAAA+TGG 0.400742 6_2:+19972324 None:intergenic
CGAGTCATCGTTACCGGAGA+TGG 0.404690 6_2:+19972095 None:intergenic
CGGTAACGATGACTCGTTTA+CGG 0.408728 6_2:-19972088 Msa0912110:five_prime_UTR
CGTAAACGAGTCATCGTTAC+CGG 0.409038 6_2:+19972089 None:intergenic
CATGCAATGGTATCAAGTTC+AGG 0.409292 6_2:-19966885 Msa0912110:intron
TGCTGCTGCTTCTCTTGGGC+AGG 0.409753 6_2:-19968918 Msa0912110:intron
TGAAGGCGCAGATTCGAAAA+TGG 0.411353 6_2:-19963326 Msa0912110:CDS
CTGTTGCTGCTGCTTCTCTT+GGG 0.413397 6_2:-19968922 Msa0912110:five_prime_UTR
CTGGAATCGCGTTTGGGAAG+TGG 0.416715 6_2:-19971939 Msa0912110:five_prime_UTR
CACACTGTTAGCCGTCTAAT+GGG 0.419126 6_2:-19961842 Msa0912110:three_prime_UTR
CCAAGAGAAGCAGCAGCAAC+AGG 0.422729 6_2:+19968923 None:intergenic
TGAGATGAAGAAGGTGGTTA+TGG 0.425745 6_2:+19972306 None:intergenic
CTGTCCTGTTCTGCGAAGCC+TGG 0.426035 6_2:+19968759 None:intergenic
TGCAGAGCTAAGGAAGATAT+TGG 0.431754 6_2:-19970450 Msa0912110:five_prime_UTR
TTCAGATGGTATCTTTACTA+AGG 0.432126 6_2:+19963345 None:intergenic
GAAGCAGCAGCAACAGGCTC+AGG 0.438424 6_2:+19968929 None:intergenic
GATTGTTGTTGTAAGGAGAT+TGG 0.439463 6_2:-19971968 Msa0912110:five_prime_UTR
CTACCCAAGACTTTGTAGTC+TGG 0.439954 6_2:+19964024 None:intergenic
GAACACCGATTGTTGTTGTA+AGG 0.440017 6_2:-19971975 Msa0912110:five_prime_UTR
TCTGTGGACAGGAACTTATA+TGG 0.440276 6_2:-19966311 Msa0912110:intron
CAAGCCAGGCTTCGCAGAAC+AGG 0.441419 6_2:-19968763 Msa0912110:five_prime_UTR
CTGCTGCGAGAACTATCAAA+AGG 0.443736 6_2:-19962020 Msa0912110:CDS
GTAAGGAGATTGGTTCAAAC+TGG 0.444300 6_2:-19971958 Msa0912110:five_prime_UTR
TTCAAACTGGAATCGCGTTT+GGG 0.445466 6_2:-19971945 Msa0912110:five_prime_UTR
ACCGGAGATGGAAGCGGTGG+TGG 0.448581 6_2:+19972107 None:intergenic
AAGGTGGTTATGGTTGGGAT+TGG 0.451442 6_2:+19972316 None:intergenic
TTCAATCAACTTCTTGAGTG+TGG 0.451469 6_2:-19965692 Msa0912110:CDS
ACAGCTTCTTTCTCTGCAGT+TGG 0.454041 6_2:+19964723 None:intergenic
GAGTTAGAATCCTCTCCATT+TGG 0.454405 6_2:-19961767 Msa0912110:three_prime_UTR
TTTCTGTTAGTGTAAAAGAA+AGG 0.455354 6_2:+19963290 None:intergenic
TAACCCAGACTACAAAGTCT+TGG 0.462363 6_2:-19964028 Msa0912110:CDS
AACTGTTGAACCAAGTTAGC+TGG 0.464113 6_2:+19962054 None:intergenic
ACCACCACCGCTTCCATCTC+CGG 0.464835 6_2:-19972108 Msa0912110:five_prime_UTR
AACCCAGACTACAAAGTCTT+GGG 0.469360 6_2:-19964027 Msa0912110:CDS
GCAATTGAAATAATTGCTGC+TGG 0.469883 6_2:+19962076 None:intergenic
TACAGTATTTGATTCTGGTC+GGG 0.473562 6_2:+19962324 None:intergenic
AGGTGATTGCAAAACATTTG+AGG 0.473616 6_2:-19961938 Msa0912110:three_prime_UTR
GCTGGGCTGGCTAGGAGAGC+AGG 0.475414 6_2:-19968661 Msa0912110:five_prime_UTR
TACCCAAGACTTTGTAGTCT+GGG 0.475638 6_2:+19964025 None:intergenic
GTACTGGAAGGAATTGCAAT+TGG 0.483601 6_2:-19964054 Msa0912110:CDS
CAAAATCTGGCCAAAACGTA+GGG 0.486756 6_2:+19964952 None:intergenic
ACAAGAACTTGGTTTGTCCT+TGG 0.490549 6_2:-19968975 Msa0912110:five_prime_UTR
TTGGTGTTGTTGTTGAAATG+AGG 0.494406 6_2:+19972232 None:intergenic
AACAGGAAGAATGTCTTGAA+TGG 0.494577 6_2:+19962263 None:intergenic
AGGAAGATATTGGTGGAACT+TGG 0.495469 6_2:-19970440 Msa0912110:five_prime_UTR
GCTGTTACAAAGGCTTTGAC+AGG 0.495486 6_2:-19964705 Msa0912110:intron
ACGGTTAGAGGAATTGGAGA+TGG 0.498793 6_2:+19972167 None:intergenic
GCTTCTTTCTCTGCAGTTGG+TGG 0.500011 6_2:+19964726 None:intergenic
GCCTTATGCTATTGCTATCA+GGG 0.500679 6_2:-19962878 Msa0912110:CDS
GGCATATATCAAAATTGCTC+AGG 0.501314 6_2:-19969909 Msa0912110:five_prime_UTR
AACATGATTGAACAAGAACT+TGG 0.501877 6_2:-19968986 Msa0912110:five_prime_UTR
TCAATCAACTTCTTGAGTGT+GGG 0.503138 6_2:-19965691 Msa0912110:CDS
GATATTGGTGGAACTTGGTC+CGG 0.507286 6_2:-19970435 Msa0912110:intron
AGCGGTGGTGGTGCATTTGG+CGG 0.507481 6_2:+19972119 None:intergenic
TCAGGAATGACGGAAAGAAC+AGG 0.508934 6_2:+19962246 None:intergenic
AATCATAGGTTTATCAAGCC+AGG 0.509593 6_2:-19968777 Msa0912110:intron
CGACCTAAGCGCGTCGGAAG+CGG 0.512254 6_2:-19972046 Msa0912110:five_prime_UTR
CTAAGAAGATTTCCAGGGTG+TGG 0.512895 6_2:+19965653 None:intergenic
AATCTCCTTACAACAACAAT+CGG 0.513410 6_2:+19971970 None:intergenic
CAGGCTTCGCAGAACAGGAC+AGG 0.514638 6_2:-19968758 Msa0912110:five_prime_UTR
TTCGAATCTGCGCCTTCAGA+TGG 0.516060 6_2:+19963331 None:intergenic
GATAGTTCTCGCAGCAGCGC+GGG 0.517491 6_2:+19962026 None:intergenic
GAAATTGCAGCTTGAACACC+TGG 0.518786 6_2:+19968712 None:intergenic
AGGTTAGAGCTGCAGAGCTA+AGG 0.520960 6_2:-19970460 Msa0912110:five_prime_UTR
TAACTATTGTTCCCATTAGA+CGG 0.523527 6_2:+19961831 None:intergenic
TTGAATACAGGCTTGAATGC+AGG 0.523603 6_2:-19966929 Msa0912110:intron
TCTTGCAGCAGCTGTTTCCA+AGG 0.528924 6_2:+19962974 None:intergenic
ACAGGCTTGAATGCAGGAGA+TGG 0.537881 6_2:-19966923 Msa0912110:intron
CTCTGAGAAAATTTCAGCCA+AGG 0.538341 6_2:+19968958 None:intergenic
TGCAGGCAGTTGTCGATGAG+TGG 0.539064 6_2:-19967755 Msa0912110:intron
GCAAGGTCCTTGTCATGGAA+TGG 0.539892 6_2:-19966238 Msa0912110:CDS
CCCCTGATAGCAATAGCATA+AGG 0.541950 6_2:+19962877 None:intergenic
AGATTCGAAAATGGTTATGA+AGG 0.542153 6_2:-19963317 Msa0912110:CDS
ATGTAGGGTTTAGATGCACT+TGG 0.550374 6_2:-19963005 Msa0912110:intron
ATGAAGAAGGTGGTTATGGT+TGG 0.550628 6_2:+19972310 None:intergenic
CCAGAATCAAATACTGTACT+CGG 0.551398 6_2:-19962319 Msa0912110:CDS
CCTTGTCATGGAATGGATTG+AGG 0.554585 6_2:-19966231 Msa0912110:intron
TAGATTTACCTCAGGAATGA+CGG 0.561552 6_2:+19962236 None:intergenic
AACGCAAGATCAAAATGTCA+AGG 0.562150 6_2:+19968689 None:intergenic
ATGAGAGCTCCCTCTACTCT+CGG 0.566002 6_2:+19961795 None:intergenic
AACTCGCAAGGTCCTTGTCA+TGG 0.566536 6_2:-19966243 Msa0912110:CDS
CCAAAGAAGATCTAAGCTGA+GGG 0.567593 6_2:+19963959 None:intergenic
CATGTTGAAAGCAACTTCTG+TGG 0.571892 6_2:+19969003 None:intergenic
ATCGTTACCGGAGATGGAAG+CGG 0.573382 6_2:+19972101 None:intergenic
AACGACGACGGCGGCGAAGA+CGG 0.573464 6_2:+19972148 None:intergenic
ACTTCTCACTTGTTATCCGA+AGG 0.577116 6_2:-19964158 Msa0912110:intron
TAAGAAGATTTCCAGGGTGT+GGG 0.577245 6_2:+19965654 None:intergenic
GTACAGTATTTGATTCTGGT+CGG 0.577930 6_2:+19962323 None:intergenic
GCAGGCAGTTGTCGATGAGT+GGG 0.578173 6_2:-19967754 Msa0912110:intron
ATAACAAGTGAGAAGTATGA+AGG 0.579938 6_2:+19964165 None:intergenic
ACGCAAGATCAAAATGTCAA+GGG 0.580070 6_2:+19968690 None:intergenic
TACAATAATGAAGCATGCAA+TGG 0.580321 6_2:-19966898 Msa0912110:CDS
GTGTACTCTGTGTACATCAA+AGG 0.581508 6_2:+19966266 None:intergenic
TATCATGCAGACCCACACCC+TGG 0.585654 6_2:-19965665 Msa0912110:CDS
TTCAAACAAGAATTGCGTGA+TGG 0.588415 6_2:-19964915 Msa0912110:CDS
TGTTCTTTCCGTCATTCCTG+AGG 0.588868 6_2:-19962244 Msa0912110:intron
CCAAAATCTGGCCAAAACGT+AGG 0.590824 6_2:+19964951 None:intergenic
CAATTGAAATAATTGCTGCT+GGG 0.591793 6_2:+19962077 None:intergenic
TGCTGCGAGAACTATCAAAA+GGG 0.593150 6_2:-19962019 Msa0912110:CDS
ACTAATTGACCGAGAGTAGA+GGG 0.594538 6_2:-19961804 Msa0912110:three_prime_UTR
CAATAGCATAAGGCGTTGGA+AGG 0.595659 6_2:+19962887 None:intergenic
TGTAGGGTTTAGATGCACTT+GGG 0.596142 6_2:-19963004 Msa0912110:intron
TTTGAATGAGATGAAGAAGG+TGG 0.596838 6_2:+19972300 None:intergenic
AATCTTCTTAGGACATCTGA+TGG 0.602700 6_2:-19965641 Msa0912110:CDS
TCTTGGGTAGTACTTACCCA+TGG 0.603506 6_2:-19964011 Msa0912110:CDS
TCTAGAAGATATATCTAAGG+AGG 0.603874 6_2:-19965018 Msa0912110:intron
AACTAATTGACCGAGAGTAG+AGG 0.605531 6_2:-19961805 Msa0912110:three_prime_UTR
AGAGAAAGAAGCTGTTACAA+AGG 0.607470 6_2:-19964715 Msa0912110:CDS
ATATGGTTCTATACAAGATG+TGG 0.611017 6_2:-19966294 Msa0912110:CDS
AATTGTTCAAGAATTTGCCA+AGG 0.611754 6_2:-19963155 Msa0912110:intron
TGTAGCCTTGCTGTACTGGA+AGG 0.614360 6_2:-19964066 Msa0912110:CDS
TCCAAAGAAGATCTAAGCTG+AGG 0.616907 6_2:+19963958 None:intergenic
ATAGCAATAGCATAAGGCGT+TGG 0.618335 6_2:+19962883 None:intergenic
AATTGCTGCTGGGATTCCGG+TGG 0.620635 6_2:+19962087 None:intergenic
GAAAAGAAGAAATTACTGAA+AGG 0.620679 6_2:+19962948 None:intergenic
ATGTAAATTTCAGCTCCCAC+CGG 0.623839 6_2:-19962103 Msa0912110:intron
CCTCAATCCATTCCATGACA+AGG 0.624850 6_2:+19966231 None:intergenic
TGGTTCTATACAAGATGTGG+TGG 0.625881 6_2:-19966291 Msa0912110:CDS
AGAGCTAAGGAAGATATTGG+TGG 0.628817 6_2:-19970447 Msa0912110:five_prime_UTR
CTGTCAGCAAAGACTCAAGT+CGG 0.630172 6_2:+19963736 None:intergenic
ACTTGAGTCTTTGCTGACAG+AGG 0.630712 6_2:-19963733 Msa0912110:intron
AAATTTGAATGAGATGAAGA+AGG 0.635416 6_2:+19972297 None:intergenic
CCTTATGCTATTGCTATCAG+GGG 0.636422 6_2:-19962877 Msa0912110:CDS
TGTTGCAGGGTGGATTTGTG+AGG 0.637741 6_2:-19963183 Msa0912110:intron
CAATTCCTTCCAGTACAGCA+AGG 0.639134 6_2:+19964061 None:intergenic
TTAGTAAAGATACCATCTGA+AGG 0.640093 6_2:-19963343 Msa0912110:CDS
ATTGCTGCTGGGATTCCGGT+GGG 0.640904 6_2:+19962088 None:intergenic
AAATCTGGCCAAAACGTAGG+GGG 0.651968 6_2:+19964954 None:intergenic
CGGAGTAGCAACGACGACGG+CGG 0.652374 6_2:+19972139 None:intergenic
CACAGAGTACACAACTCGCA+AGG 0.664553 6_2:-19966255 Msa0912110:CDS
AATGTCATAGGGAGAGACAA+AGG 0.665794 6_2:-19962352 Msa0912110:intron
CTTATTCGACCTAAGCGCGT+CGG 0.670702 6_2:-19972052 Msa0912110:five_prime_UTR
ACTCGTTTACGGCAAAGTCA+GGG 0.671099 6_2:-19972077 Msa0912110:five_prime_UTR
TGATAGTTCTCGCAGCAGCG+CGG 0.673188 6_2:+19962025 None:intergenic
GTTACCGGAGATGGAAGCGG+TGG 0.673970 6_2:+19972104 None:intergenic
AACAGTGTGACTGAAAACAT+AGG 0.680608 6_2:+19961856 None:intergenic
AAAATCTGGCCAAAACGTAG+GGG 0.683974 6_2:+19964953 None:intergenic
ATGTCCTAAGAAGATTTCCA+GGG 0.685364 6_2:+19965648 None:intergenic
AGCTCATTTAGATACGATGG+TGG 0.687240 6_2:+19969058 None:intergenic
GCTGTTAAAGTACAAAGACC+AGG 0.687316 6_2:-19968730 Msa0912110:five_prime_UTR
GAGAGCTCATTTAGATACGA+TGG 0.691745 6_2:+19969055 None:intergenic
TGGCGGAGTAGCAACGACGA+CGG 0.706486 6_2:+19972136 None:intergenic
CAAAGAAGATCTAAGCTGAG+GGG 0.721571 6_2:+19963960 None:intergenic
GAATCAAATACTGTACTCGG+AGG 0.741867 6_2:-19962316 Msa0912110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTATTTTTTTTTT+AGG - chr6_2:19968596-19968615 Msa0912110:intron 0.0%
!!! AAAAAATATATTTTAGTTTG+CGG + chr6_2:19964085-19964104 None:intergenic 10.0%
!!! AAAAAATTACAAATACTTTT+AGG + chr6_2:19964684-19964703 None:intergenic 10.0%
!!! AATTGTATTTTTATTTGATT+AGG - chr6_2:19966807-19966826 Msa0912110:intron 10.0%
!!! TTAAATTTGATAACTTAAAA+TGG + chr6_2:19969248-19969267 None:intergenic 10.0%
!! TGTTTATCTAAACAATTATT+TGG - chr6_2:19963060-19963079 Msa0912110:intron 15.0%
!!! ACATGACATATTTAAAATTT+TGG + chr6_2:19963821-19963840 None:intergenic 15.0%
!! TGAATTTGTAACATTTAATT+GGG - chr6_2:19963840-19963859 Msa0912110:intron 15.0%
!!! AAAAATATATTTTAGTTTGC+GGG + chr6_2:19964084-19964103 None:intergenic 15.0%
!! TACAAATAAATCAAAACTTA+CGG + chr6_2:19964176-19964195 None:intergenic 15.0%
!! AACATTTGTAATAAAAAACA+TGG + chr6_2:19964389-19964408 None:intergenic 15.0%
!! AATACAAATATTTGGAAATA+TGG + chr6_2:19964618-19964637 None:intergenic 15.0%
!!! AGATTTGAAATACAAATATT+TGG + chr6_2:19964626-19964645 None:intergenic 15.0%
!!! ACTTTTAGGTATATTTATTT+AGG + chr6_2:19964670-19964689 None:intergenic 15.0%
!! CATATTTAAATAAATGACAA+AGG + chr6_2:19964770-19964789 None:intergenic 15.0%
!! TTAAAACTCAATTAAAGATT+TGG + chr6_2:19964798-19964817 None:intergenic 15.0%
!!! TTCCAATTTTATTTTTTTGT+AGG - chr6_2:19964955-19964974 Msa0912110:CDS 15.0%
!! ATCCTACAAAAAAATAAAAT+TGG + chr6_2:19964960-19964979 None:intergenic 15.0%
!!! ATTTTTCGATAAATTAGATT+GGG + chr6_2:19966421-19966440 None:intergenic 15.0%
!!! TATTTTTCGATAAATTAGAT+TGG + chr6_2:19966422-19966441 None:intergenic 15.0%
!! AATTGTAATTGCAAAAAAAA+TGG + chr6_2:19966791-19966810 None:intergenic 15.0%
!! AAGAACAATAATATAAGAAT+GGG + chr6_2:19966860-19966879 None:intergenic 15.0%
!! AAAGAACAATAATATAAGAA+TGG + chr6_2:19966861-19966880 None:intergenic 15.0%
!! ATCACAATACTTAATAAATT+TGG - chr6_2:19967375-19967394 Msa0912110:intron 15.0%
!!! GATATTTTCTAATAATTACA+GGG + chr6_2:19967958-19967977 None:intergenic 15.0%
!!! TGATATTTTCTAATAATTAC+AGG + chr6_2:19967959-19967978 None:intergenic 15.0%
!! AAAGAAAATGTAAGATATAA+TGG + chr6_2:19968112-19968131 None:intergenic 15.0%
!! TATAGTTGTAACTATAAAAT+TGG + chr6_2:19969421-19969440 None:intergenic 15.0%
!! CTGATACATTAAATATATAA+TGG - chr6_2:19969602-19969621 Msa0912110:intron 15.0%
!!! CTTTTTCTCTTATTTTTTTT+AGG - chr6_2:19969835-19969854 Msa0912110:intron 15.0%
!! AATTAGAAAGAAAAGATATA+TGG + chr6_2:19970189-19970208 None:intergenic 15.0%
!!! ATTAATCTTTTTTATTTCCT+TGG - chr6_2:19970610-19970629 Msa0912110:intron 15.0%
!! AGATATTAAAATAAATACCT+TGG + chr6_2:19970909-19970928 None:intergenic 15.0%
!!! TATTGATTGATTTTTCTTTT+AGG - chr6_2:19971274-19971293 Msa0912110:intron 15.0%
!!! ATTGATTGATTTTTCTTTTA+GGG - chr6_2:19971275-19971294 Msa0912110:intron 15.0%
!!! TTTTAATTTGAAACAGTTTT+AGG + chr6_2:19971387-19971406 None:intergenic 15.0%
!!! TTTTTTTGAAGAAACTAAAA+TGG + chr6_2:19972164-19972183 None:intergenic 15.0%
!! TCATAAAAATGCTTATGAAT+AGG + chr6_2:19963008-19963027 None:intergenic 20.0%
!! AAAACAACTTACAGATTATA+CGG - chr6_2:19963382-19963401 Msa0912110:intron 20.0%
!!! TACGGAAATAAGAATTTTTT+AGG - chr6_2:19963400-19963419 Msa0912110:intron 20.0%
!!! TAGGTGTTATTTTATATCTT+AGG - chr6_2:19963696-19963715 Msa0912110:intron 20.0%
!! GTGAATTTGTAACATTTAAT+TGG - chr6_2:19963839-19963858 Msa0912110:intron 20.0%
!!! TTGCTACTTAAAATTCAAAA+GGG + chr6_2:19963884-19963903 None:intergenic 20.0%
!!! TTTGCTACTTAAAATTCAAA+AGG + chr6_2:19963885-19963904 None:intergenic 20.0%
!! ATAATAGTTTAGATTCTTAG+TGG - chr6_2:19964039-19964058 Msa0912110:CDS 20.0%
!!! CTATTTCTTTTCTTTGTTTT+TGG - chr6_2:19964216-19964235 Msa0912110:intron 20.0%
!!! GTAATTTTTTTTATCTGATC+TGG - chr6_2:19964694-19964713 Msa0912110:intron 20.0%
!!! GATCATGTCAATTTAATTTT+TGG - chr6_2:19964907-19964926 Msa0912110:CDS 20.0%
!! ACTATTAGAAAGGAAAAAAA+CGG + chr6_2:19965793-19965812 None:intergenic 20.0%
!! CAAATTAAATCCTATGAATT+AGG + chr6_2:19965881-19965900 None:intergenic 20.0%
!! TTTAATTGTCTTAGAAATTG+TGG - chr6_2:19966068-19966087 Msa0912110:intron 20.0%
!!! ATGTTATTTTTTTACTTCGT+TGG - chr6_2:19966111-19966130 Msa0912110:intron 20.0%
!!! TTTTTCGATAAATTAGATTG+GGG + chr6_2:19966420-19966439 None:intergenic 20.0%
!! GAAAAATAAAGTGAATGTAT+GGG - chr6_2:19966434-19966453 Msa0912110:intron 20.0%
!! AAAAATAAAGTGAATGTATG+GGG - chr6_2:19966435-19966454 Msa0912110:intron 20.0%
!! ACATACATTATGAATAGTTA+CGG + chr6_2:19966527-19966546 None:intergenic 20.0%
!! AACTATTCATAATGTATGTT+TGG - chr6_2:19966528-19966547 Msa0912110:intron 20.0%
!! TGATGTTATAACATTTCTAA+AGG + chr6_2:19967316-19967335 None:intergenic 20.0%
!!! GAGAGAATTGATTTATATTT+CGG - chr6_2:19967452-19967471 Msa0912110:intron 20.0%
!!! TTACTGTATTTTTGCAATTA+TGG - chr6_2:19967858-19967877 Msa0912110:intron 20.0%
!! AATAATCTTCCAAATTGATA+CGG - chr6_2:19968057-19968076 Msa0912110:intron 20.0%
!!! AATTCTTAGTTTTTGCATAA+TGG - chr6_2:19968272-19968291 Msa0912110:intron 20.0%
!!! GTATTTTATCTTATTATCCT+TGG - chr6_2:19968495-19968514 Msa0912110:intron 20.0%
!!! TTTGAAGTTTTCTTTTTATC+TGG - chr6_2:19968815-19968834 Msa0912110:intron 20.0%
!!! TGGGTATTTATGTTTATTTT+TGG - chr6_2:19969221-19969240 Msa0912110:intron 20.0%
!! GTTATTACATTATTGTGTTT+AGG - chr6_2:19969361-19969380 Msa0912110:intron 20.0%
!!! GAATTCTAAAATACTGTTTT+TGG - chr6_2:19969385-19969404 Msa0912110:intron 20.0%
!!! AGAACTTTCAAATATTTTGT+AGG + chr6_2:19969633-19969652 None:intergenic 20.0%
!! TATATTCATATATTGACAAC+AGG - chr6_2:19969796-19969815 Msa0912110:intron 20.0%
!!! TTAGGTATAAATTCAAGTTT+AGG - chr6_2:19969853-19969872 Msa0912110:intron 20.0%
!! AAAAGACAAAAGAAAGAATA+GGG + chr6_2:19970383-19970402 None:intergenic 20.0%
!! TAAAAGACAAAAGAAAGAAT+AGG + chr6_2:19970384-19970403 None:intergenic 20.0%
!!! AAAAGCATCTAAATTGTTAA+TGG + chr6_2:19970796-19970815 None:intergenic 20.0%
!! TAAATTGACTATATCTTCTT+CGG + chr6_2:19971133-19971152 None:intergenic 20.0%
!! AAGAAGATATAGTCAATTTA+AGG - chr6_2:19971133-19971152 Msa0912110:intron 20.0%
!! AGTTTACATTATGATTATAG+TGG + chr6_2:19971426-19971445 None:intergenic 20.0%
!!! TCTCTATTTATTTTACCAAA+TGG + chr6_2:19972295-19972314 None:intergenic 20.0%
!! AATAAATAGAGAATGCAATT+TGG - chr6_2:19972303-19972322 Msa0912110:five_prime_UTR 20.0%
! AAATTTGAATGAGATGAAGA+AGG + chr6_2:19961750-19961769 None:intergenic 25.0%
!! TCATTTATTCTTGAGTTTTG+TGG - chr6_2:19962382-19962401 Msa0912110:intron 25.0%
! GAAGAGATTATGAAAATAAG+CGG + chr6_2:19962918-19962937 None:intergenic 25.0%
!! TTTTCATAATTTCTCCAAGA+TGG - chr6_2:19963186-19963205 Msa0912110:intron 25.0%
!! GGCTTATGAAAAAAACTTTT+AGG - chr6_2:19963207-19963226 Msa0912110:intron 25.0%
!!! AGAATTTTTTAGGCATTTGA+TGG - chr6_2:19963410-19963429 Msa0912110:intron 25.0%
! ACGGAAAATTAAATGTTTGA+AGG + chr6_2:19963515-19963534 None:intergenic 25.0%
!!! GCTGGTTATTTTATAATTGT+TGG - chr6_2:19963640-19963659 Msa0912110:intron 25.0%
! ATAAAATAACACCTAGTTTG+AGG + chr6_2:19963691-19963710 None:intergenic 25.0%
! TATATCTTAGGATTGAGTTA+TGG - chr6_2:19963708-19963727 Msa0912110:intron 25.0%
! ATTGAGTTATGGTAATTGAT+AGG - chr6_2:19963719-19963738 Msa0912110:intron 25.0%
! TTGAGTTATGGTAATTGATA+GGG - chr6_2:19963720-19963739 Msa0912110:intron 25.0%
!!! AAAAGGGATTTCTGAAATTT+TGG + chr6_2:19963868-19963887 None:intergenic 25.0%
! AAAGTTACATGAACCTAAAA+GGG + chr6_2:19963911-19963930 None:intergenic 25.0%
! AAAAGTTACATGAACCTAAA+AGG + chr6_2:19963912-19963931 None:intergenic 25.0%
!! TTATTTTCACTATCCTTGTT+TGG - chr6_2:19963939-19963958 Msa0912110:intron 25.0%
! ACTAAGAACATTATAGATAC+TGG - chr6_2:19964007-19964026 Msa0912110:CDS 25.0%
! TAGTCTAGTTAGTATTATTC+TGG - chr6_2:19964408-19964427 Msa0912110:intron 25.0%
!! AAAGGAAAACTGATAATGAT+AGG + chr6_2:19964522-19964541 None:intergenic 25.0%
!! TATCATTATCAGTTTTCCTT+TGG - chr6_2:19964521-19964540 Msa0912110:intron 25.0%
!! AATTGAATCTGGTTGATATT+AGG - chr6_2:19964722-19964741 Msa0912110:CDS 25.0%
!! ATTGAATCTGGTTGATATTA+GGG - chr6_2:19964723-19964742 Msa0912110:CDS 25.0%
! TAAATGTTCATATGCTGTTA+AGG - chr6_2:19964815-19964834 Msa0912110:intron 25.0%
! AAATGTTCATATGCTGTTAA+GGG - chr6_2:19964816-19964835 Msa0912110:intron 25.0%
! AAAATTGAATACTGATCTTC+AGG - chr6_2:19965406-19965425 Msa0912110:intron 25.0%
!!! TAAGATTGCTTTTAGAATTC+AGG - chr6_2:19965453-19965472 Msa0912110:intron 25.0%
!!! AAGATTGCTTTTAGAATTCA+GGG - chr6_2:19965454-19965473 Msa0912110:intron 25.0%
! TATTAGAAAGGAAAAAAACG+GGG + chr6_2:19965791-19965810 None:intergenic 25.0%
! CTATTAGAAAGGAAAAAAAC+GGG + chr6_2:19965792-19965811 None:intergenic 25.0%
! AGTTTAAGCTTACAGAAATT+AGG - chr6_2:19965852-19965871 Msa0912110:intron 25.0%
! GTTTAAGCTTACAGAAATTA+GGG - chr6_2:19965853-19965872 Msa0912110:intron 25.0%
! TTTAAGCTTACAGAAATTAG+GGG - chr6_2:19965854-19965873 Msa0912110:intron 25.0%
!! GATATTTGTGAAGATGTTTT+AGG - chr6_2:19966013-19966032 Msa0912110:intron 25.0%
! AATAACATACACATGTATCT+AGG + chr6_2:19966099-19966118 None:intergenic 25.0%
!! GATATGAAGATTAATGGATA+TGG + chr6_2:19966188-19966207 None:intergenic 25.0%
! CAGATAGATATGAAGATTAA+TGG + chr6_2:19966194-19966213 None:intergenic 25.0%
! CGAAAAATAAAGTGAATGTA+TGG - chr6_2:19966433-19966452 Msa0912110:intron 25.0%
!! ATAATGTATGTTTGGTTTCA+TGG - chr6_2:19966536-19966555 Msa0912110:intron 25.0%
! AGTTTAGTGAAAAAGAATGA+TGG - chr6_2:19966669-19966688 Msa0912110:intron 25.0%
! GTTTAGTGAAAAAGAATGAT+GGG - chr6_2:19966670-19966689 Msa0912110:intron 25.0%
!! TTTTCTGAGTAAAACTGATT+CGG + chr6_2:19966940-19966959 None:intergenic 25.0%
! TAGAAACTGAAATTGAATAC+AGG - chr6_2:19967103-19967122 Msa0912110:intron 25.0%
! GTATTGTGATTTAATCAATG+AGG + chr6_2:19967365-19967384 None:intergenic 25.0%
!! TTTTCCCAAATTTATCCTTT+AGG - chr6_2:19967428-19967447 Msa0912110:intron 25.0%
!! TCCACTAGTTATAGATATTT+TGG - chr6_2:19967507-19967526 Msa0912110:intron 25.0%
! TCCAAAATATCTATAACTAG+TGG + chr6_2:19967511-19967530 None:intergenic 25.0%
! TACATTTGAAAATGTGAAAG+AGG - chr6_2:19967546-19967565 Msa0912110:intron 25.0%
!!! TTTTTCTAGCCTCTTTTTAT+AGG + chr6_2:19967573-19967592 None:intergenic 25.0%
!! AGTCTTATATTTATGGACAA+AGG - chr6_2:19967601-19967620 Msa0912110:intron 25.0%
! AAATCTGAATCTCTAGTTAT+GGG + chr6_2:19967643-19967662 None:intergenic 25.0%
!! AACAAGAAATGCTAATTTGT+TGG - chr6_2:19967690-19967709 Msa0912110:intron 25.0%
!!! ACAAGAAATGCTAATTTGTT+GGG - chr6_2:19967691-19967710 Msa0912110:intron 25.0%
! GCAAAAATACAGTAATCAAA+CGG + chr6_2:19967853-19967872 None:intergenic 25.0%
! ATGAACAGTGAATTTATCTA+GGG + chr6_2:19967908-19967927 None:intergenic 25.0%
!!! AATTTGGAAGATTATTTCTG+GGG + chr6_2:19968053-19968072 None:intergenic 25.0%
!! CAATTTGGAAGATTATTTCT+GGG + chr6_2:19968054-19968073 None:intergenic 25.0%
! TCAATTTGGAAGATTATTTC+TGG + chr6_2:19968055-19968074 None:intergenic 25.0%
!! TGTAAGATATAATGGAATGT+AGG + chr6_2:19968104-19968123 None:intergenic 25.0%
!! AAGTTTACTATTGCTATTGT+AGG - chr6_2:19968168-19968187 Msa0912110:intron 25.0%
!! AGTTTACTATTGCTATTGTA+GGG - chr6_2:19968169-19968188 Msa0912110:intron 25.0%
! GAAATAAACAAAATAAGAGC+AGG + chr6_2:19968300-19968319 None:intergenic 25.0%
!! TTTATTTCCTGATAATGACT+AGG - chr6_2:19968312-19968331 Msa0912110:intron 25.0%
! AAATACGAATTAGCAAACAT+CGG + chr6_2:19968481-19968500 None:intergenic 25.0%
!!! CATATATTTGACTTGTTTTG+AGG - chr6_2:19968551-19968570 Msa0912110:intron 25.0%
! GTTTATCATTTCTTGATATG+TGG - chr6_2:19968653-19968672 Msa0912110:five_prime_UTR 25.0%
! AAAGAAAACTTCAAAACACT+GGG + chr6_2:19968810-19968829 None:intergenic 25.0%
! AAAAGAAAACTTCAAAACAC+TGG + chr6_2:19968811-19968830 None:intergenic 25.0%
!! GTTTTCTTTTTATCTGGTAA+TGG - chr6_2:19968821-19968840 Msa0912110:intron 25.0%
!!! TTTTTATCTGGTAATGGTTT+GGG - chr6_2:19968827-19968846 Msa0912110:intron 25.0%
! ACACAATTTATGCATTTGTT+TGG - chr6_2:19968877-19968896 Msa0912110:intron 25.0%
! GAACAAACCAAACATAAATT+AGG + chr6_2:19968969-19968988 None:intergenic 25.0%
!! AACTCTAGAAGATATATCTA+AGG - chr6_2:19969023-19969042 Msa0912110:five_prime_UTR 25.0%
!! TTAACATTTTCGATGCTATA+AGG - chr6_2:19969264-19969283 Msa0912110:intron 25.0%
!!! TGTCTGCTTTTTAATTTATC+AGG - chr6_2:19969289-19969308 Msa0912110:intron 25.0%
! TAACAAATAAACCTCAAGAA+CGG + chr6_2:19969463-19969482 None:intergenic 25.0%
! ATTTGAAAGTTCTTTCTGTT+TGG - chr6_2:19969640-19969659 Msa0912110:intron 25.0%
! AATTACTTTCCCTAATAAAG+AGG + chr6_2:19969729-19969748 None:intergenic 25.0%
! TTTATTAGGGAAAGTAATTC+TGG - chr6_2:19969730-19969749 Msa0912110:intron 25.0%
! ATAAATAAGCAATAAGCCTT+TGG + chr6_2:19969776-19969795 None:intergenic 25.0%
!! ACATTAAATTAAGCCTTGTA+TGG + chr6_2:19969921-19969940 None:intergenic 25.0%
! TTTGGAGAATCTTCTTTATA+AGG - chr6_2:19970103-19970122 Msa0912110:intron 25.0%
! CTTCTTTATAAGGTAAACAT+AGG - chr6_2:19970113-19970132 Msa0912110:intron 25.0%
! GATAATTAGATTTGACAATG+AGG + chr6_2:19970214-19970233 None:intergenic 25.0%
! AAAGACAAAAGAAAGAATAG+GGG + chr6_2:19970382-19970401 None:intergenic 25.0%
! TTTCTGTTAGTGTAAAAGAA+AGG + chr6_2:19970757-19970776 None:intergenic 25.0%
!! TTCTTTTACACTAACAGAAA+AGG - chr6_2:19970757-19970776 Msa0912110:intron 25.0%
! AAACTAGAAATGAAGAAAGA+AGG + chr6_2:19970982-19971001 None:intergenic 25.0%
! GAAAAGAAGAAATTACTGAA+AGG + chr6_2:19971099-19971118 None:intergenic 25.0%
! AATATAACAATGCAGAGATA+TGG + chr6_2:19971244-19971263 None:intergenic 25.0%
! ATGAAACATGAAACGATAAT+TGG - chr6_2:19971623-19971642 Msa0912110:intron 25.0%
!!! ATTTTTTTTGCTTCTCACTA+AGG - chr6_2:19972086-19972105 Msa0912110:five_prime_UTR 25.0%
!!! ATTTATTTTACCAAATGGAG+AGG + chr6_2:19972290-19972309 None:intergenic 25.0%
TGGAGAAATGGAAGTTATTA+TGG + chr6_2:19961711-19961730 None:intergenic 30.0%
! GTCGCATTTTATAAGGTTTT+GGG + chr6_2:19961791-19961810 None:intergenic 30.0%
! AGTCGCATTTTATAAGGTTT+TGG + chr6_2:19961792-19961811 None:intergenic 30.0%
TTAGTTGGGATGAAAAAAGA+GGG + chr6_2:19961852-19961871 None:intergenic 30.0%
AATCTCCTTACAACAACAAT+CGG + chr6_2:19962077-19962096 None:intergenic 30.0%
!!! TGATTTTTCGAGTTTTGTGA+TGG - chr6_2:19962206-19962225 Msa0912110:intron 30.0%
! TGAGATGTTTCAGGTATTAT+TGG - chr6_2:19962346-19962365 Msa0912110:intron 30.0%
!! TTTATTCTTGAGTTTTGTGG+TGG - chr6_2:19962385-19962404 Msa0912110:intron 30.0%
TTAGGAGAACTTATGGTATT+AGG - chr6_2:19962489-19962508 Msa0912110:intron 30.0%
! CTAATGTTCATAAGCTTTTC+AGG - chr6_2:19962519-19962538 Msa0912110:intron 30.0%
CGTAAGTGCTTATCATAAAA+GGG + chr6_2:19962630-19962649 None:intergenic 30.0%
ATGATCTGATGATATGTTTG+AGG - chr6_2:19962705-19962724 Msa0912110:intron 30.0%
!!! TTTTCTGCTACTCTAGTTTT+TGG - chr6_2:19962748-19962767 Msa0912110:intron 30.0%
! GCTTATTTGAGTTTATCTAG+TGG - chr6_2:19963087-19963106 Msa0912110:intron 30.0%
!!! GTTTTTTTCATAAGCCATCT+TGG + chr6_2:19963203-19963222 None:intergenic 30.0%
AAGCTGTTTATCCAAACATT+CGG - chr6_2:19963304-19963323 Msa0912110:CDS 30.0%
!! ATGATTTGTTTCTGTTAGCA+TGG - chr6_2:19963435-19963454 Msa0912110:intron 30.0%
! TCAGTTCTTTTCATTGCAAA+CGG + chr6_2:19963534-19963553 None:intergenic 30.0%
! AAGTAGCAAATTTCCCTTTT+AGG - chr6_2:19963895-19963914 Msa0912110:intron 30.0%
AAAGTTGTATGCATCAGTAA+TGG + chr6_2:19964109-19964128 None:intergenic 30.0%
TATTTGTGATTCTTCCTGTA+TGG - chr6_2:19964240-19964259 Msa0912110:intron 30.0%
TGATGAAATGAAAACCATAC+AGG + chr6_2:19964257-19964276 None:intergenic 30.0%
! TAACTTGGGTTTTTATCGAA+TGG + chr6_2:19964336-19964355 None:intergenic 30.0%
TAAAAACCCAAGTTATGAAG+AGG - chr6_2:19964341-19964360 Msa0912110:intron 30.0%
AAAAACCCAAGTTATGAAGA+GGG - chr6_2:19964342-19964361 Msa0912110:intron 30.0%
TCTAGTTAGTATTATTCTGG+CGG - chr6_2:19964411-19964430 Msa0912110:intron 30.0%
ATCTGGTAGTTAATTGAATC+TGG - chr6_2:19964711-19964730 Msa0912110:CDS 30.0%
CATTTGAGCATAACATGTAA+AGG + chr6_2:19964862-19964881 None:intergenic 30.0%
AACATGATTGAACAAGAACT+TGG - chr6_2:19965058-19965077 Msa0912110:intron 30.0%
GCTAGAAAAATACACCAATA+AGG + chr6_2:19965165-19965184 None:intergenic 30.0%
! AACTTTTGTCTCTGAATCAT+AGG - chr6_2:19965253-19965272 Msa0912110:intron 30.0%
!! CATTTTGATCTTGCGTTTTA+TGG - chr6_2:19965361-19965380 Msa0912110:intron 30.0%
! TTATCATTGCTGTTGAAGTT+AGG - chr6_2:19965496-19965515 Msa0912110:intron 30.0%
! TATCATTGCTGTTGAAGTTA+GGG - chr6_2:19965497-19965516 Msa0912110:intron 30.0%
!! GTTAGGGATTTTTGGATAAA+AGG - chr6_2:19965513-19965532 Msa0912110:intron 30.0%
AACCTCTTGTGTAAAAAACA+GGG - chr6_2:19965681-19965700 Msa0912110:CDS 30.0%
ATTAGAAAGGAAAAAAACGG+GGG + chr6_2:19965790-19965809 None:intergenic 30.0%
CATTGGTACAACTATTAGAA+AGG + chr6_2:19965803-19965822 None:intergenic 30.0%
!! TTGTACCAATGTTTTTCAAC+TGG - chr6_2:19965812-19965831 Msa0912110:intron 30.0%
TTAAGCTTACAGAAATTAGG+GGG - chr6_2:19965855-19965874 Msa0912110:intron 30.0%
TCAACTATATTCCATCGTAT+AGG - chr6_2:19965939-19965958 Msa0912110:intron 30.0%
ATTGTCTTAGAAATTGTGGT+TGG - chr6_2:19966072-19966091 Msa0912110:intron 30.0%
TTGTCTTAGAAATTGTGGTT+GGG - chr6_2:19966073-19966092 Msa0912110:intron 30.0%
!! GTGTGTTCTTTTATTTATGC+AGG - chr6_2:19966272-19966291 Msa0912110:CDS 30.0%
CTAGTGTTTACATGATTGAT+TGG - chr6_2:19966370-19966389 Msa0912110:intron 30.0%
CATTCGATAAATTTCTGATC+CGG + chr6_2:19966738-19966757 None:intergenic 30.0%
! AACAGACTAATTTGCATCAA+TGG + chr6_2:19966900-19966919 None:intergenic 30.0%
TACAATAATGAAGCATGCAA+TGG - chr6_2:19967146-19967165 Msa0912110:intron 30.0%
CTCTCCTAAAGGATAAATTT+GGG + chr6_2:19967435-19967454 None:intergenic 30.0%
TCTCTCCTAAAGGATAAATT+TGG + chr6_2:19967436-19967455 None:intergenic 30.0%
AAATCAATTCTCTCTCCTAA+AGG + chr6_2:19967446-19967465 None:intergenic 30.0%
TTGATTGCTAGTTACAGAAA+AGG - chr6_2:19967481-19967500 Msa0912110:intron 30.0%
CCATAAATATAAGACTCTTG+AGG + chr6_2:19967597-19967616 None:intergenic 30.0%
! CCTCAAGAGTCTTATATTTA+TGG - chr6_2:19967594-19967613 Msa0912110:intron 30.0%
CAAATCTGAATCTCTAGTTA+TGG + chr6_2:19967644-19967663 None:intergenic 30.0%
GCATTATTATTCGTTATCTG+TGG - chr6_2:19967717-19967736 Msa0912110:intron 30.0%
! ATATGGTTCTATACAAGATG+TGG - chr6_2:19967750-19967769 Msa0912110:five_prime_UTR 30.0%
TACAGTAATCAAACGGTAAA+TGG + chr6_2:19967846-19967865 None:intergenic 30.0%
GATGAACAGTGAATTTATCT+AGG + chr6_2:19967909-19967928 None:intergenic 30.0%
!! TATTACACAGTTGTTTCTCT+AGG + chr6_2:19968027-19968046 None:intergenic 30.0%
!! CAGAGAGCATAATTTTTAAC+AGG + chr6_2:19968141-19968160 None:intergenic 30.0%
! GTTTACTATTGCTATTGTAG+GGG - chr6_2:19968170-19968189 Msa0912110:intron 30.0%
! GATGGCAAATTAGCTTATTT+AGG - chr6_2:19968421-19968440 Msa0912110:intron 30.0%
AATACGAATTAGCAAACATC+GGG + chr6_2:19968480-19968499 None:intergenic 30.0%
! ATCCTTGGCATTTATTCTTT+TGG - chr6_2:19968510-19968529 Msa0912110:intron 30.0%
TATTATGCATTGCTCTAGTT+TGG - chr6_2:19968756-19968775 Msa0912110:five_prime_UTR 30.0%
!!! CTTTTTATCTGGTAATGGTT+TGG - chr6_2:19968826-19968845 Msa0912110:intron 30.0%
GAATGCTCACATTATGAAAT+AGG - chr6_2:19968917-19968936 Msa0912110:intron 30.0%
TAGACAGCCTAATTTATGTT+TGG - chr6_2:19968959-19968978 Msa0912110:five_prime_UTR 30.0%
TCTAGAAGATATATCTAAGG+AGG - chr6_2:19969026-19969045 Msa0912110:five_prime_UTR 30.0%
! CATCTTGTAAATCGTGATTT+TGG - chr6_2:19969171-19969190 Msa0912110:intron 30.0%
TTACTTGCATTGAACTTTGT+AGG - chr6_2:19969489-19969508 Msa0912110:intron 30.0%
! ATAACAAGTGAGAAGTATGA+AGG + chr6_2:19969882-19969901 None:intergenic 30.0%
AAGACAAAAGAAAGAATAGG+GGG + chr6_2:19970381-19970400 None:intergenic 30.0%
ATGAGCAATTTAAGCTTCAT+TGG - chr6_2:19970553-19970572 Msa0912110:intron 30.0%
!! CTTTAAAACCTGTCCTAATA+AGG - chr6_2:19970640-19970659 Msa0912110:intron 30.0%
!! TACTAAGGTCTTATCTGTTT+TGG + chr6_2:19970687-19970706 None:intergenic 30.0%
TTCAGATGGTATCTTTACTA+AGG + chr6_2:19970702-19970721 None:intergenic 30.0%
TTAGTAAAGATACCATCTGA+AGG - chr6_2:19970701-19970720 Msa0912110:intron 30.0%
AGATTCGAAAATGGTTATGA+AGG - chr6_2:19970727-19970746 Msa0912110:intron 30.0%
CTTTCATGATAATTGTTGCA+GGG - chr6_2:19970848-19970867 Msa0912110:intron 30.0%
AATTGTTCAAGAATTTGCCA+AGG - chr6_2:19970889-19970908 Msa0912110:intron 30.0%
AAGAAAGAAGGATCTAATGA+AGG + chr6_2:19970970-19970989 None:intergenic 30.0%
!! AGCAAATTTTAACACTCAGA+GGG + chr6_2:19971009-19971028 None:intergenic 30.0%
!! AAGCAAATTTTAACACTCAG+AGG + chr6_2:19971010-19971029 None:intergenic 30.0%
TTTGCTTTCAATCCAAATGT+AGG - chr6_2:19971023-19971042 Msa0912110:intron 30.0%
TTGCTTTCAATCCAAATGTA+GGG - chr6_2:19971024-19971043 Msa0912110:intron 30.0%
ATATCTTCTTCGGTCATTAA+AGG + chr6_2:19971123-19971142 None:intergenic 30.0%
! ATTGAAGTCTTCTTTTCTTC+TGG + chr6_2:19971193-19971212 None:intergenic 30.0%
TCATGTAAGTACCATATTTC+CGG + chr6_2:19971302-19971321 None:intergenic 30.0%
! ACTAACTTTTACCCAAAACA+AGG - chr6_2:19971354-19971373 Msa0912110:intron 30.0%
! CTAACTTTTACCCAAAACAA+GGG - chr6_2:19971355-19971374 Msa0912110:intron 30.0%
!!! TAGGATTTTTCCCTTGTTTT+GGG + chr6_2:19971368-19971387 None:intergenic 30.0%
!! TTAGGATTTTTCCCTTGTTT+TGG + chr6_2:19971369-19971388 None:intergenic 30.0%
!! TGTAAACTTCTAAAGCTTCT+AGG - chr6_2:19971438-19971457 Msa0912110:intron 30.0%
ACTCATAAACACATTGCAAT+GGG + chr6_2:19971557-19971576 None:intergenic 30.0%
TACTCATAAACACATTGCAA+TGG + chr6_2:19971558-19971577 None:intergenic 30.0%
ATGTGAAATTGCTTATGACT+TGG + chr6_2:19971884-19971903 None:intergenic 30.0%
CAATTGAAATAATTGCTGCT+GGG + chr6_2:19971970-19971989 None:intergenic 30.0%
!!! AAAAGGGTGTTTTTGTGATA+TGG - chr6_2:19972041-19972060 Msa0912110:five_prime_UTR 30.0%
! TTTTTGTGATATGGATGTAC+TGG - chr6_2:19972050-19972069 Msa0912110:five_prime_UTR 30.0%
TAACTATTGTTCCCATTAGA+CGG + chr6_2:19972216-19972235 None:intergenic 30.0%
TTTGAATGAGATGAAGAAGG+TGG + chr6_2:19961747-19961766 None:intergenic 35.0%
! ATGAGGAGTCGCATTTTATA+AGG + chr6_2:19961798-19961817 None:intergenic 35.0%
!! TTGGTGTTGTTGTTGAAATG+AGG + chr6_2:19961815-19961834 None:intergenic 35.0%
GTTAGTTGGGATGAAAAAAG+AGG + chr6_2:19961853-19961872 None:intergenic 35.0%
! GATTGTTGTTGTAAGGAGAT+TGG - chr6_2:19962076-19962095 Msa0912110:CDS 35.0%
ATGATAGCTTGAGATGTTTC+AGG - chr6_2:19962337-19962356 Msa0912110:CDS 35.0%
AAACACTTGTGACACTCTTT+AGG - chr6_2:19962471-19962490 Msa0912110:intron 35.0%
! ACACTCTTTAGGAGAACTTA+TGG - chr6_2:19962482-19962501 Msa0912110:intron 35.0%
GCGTAAGTGCTTATCATAAA+AGG + chr6_2:19962631-19962650 None:intergenic 35.0%
ATGATAAGCACTTACGCAAT+AGG - chr6_2:19962634-19962653 Msa0912110:intron 35.0%
! TGATGATATGTTTGAGGTAG+AGG - chr6_2:19962711-19962730 Msa0912110:intron 35.0%
TCTTAAGTTCTCCGAATGTT+TGG + chr6_2:19963318-19963337 None:intergenic 35.0%
GACATGTTCATAAGCTCTTT+AGG - chr6_2:19963349-19963368 Msa0912110:CDS 35.0%
TAACAAATCACTGCTTTCGT+AGG + chr6_2:19963476-19963495 None:intergenic 35.0%
! TCACTCACCTTTTTACTGTT+CGG - chr6_2:19963555-19963574 Msa0912110:intron 35.0%
TGCAAAACCGAACAGTAAAA+AGG + chr6_2:19963565-19963584 None:intergenic 35.0%
! TTTTTACTGTTCGGTTTTGC+AGG - chr6_2:19963564-19963583 Msa0912110:intron 35.0%
ATGTACTCTATCCTCAAACT+AGG - chr6_2:19963677-19963696 Msa0912110:intron 35.0%
! TATCCTTGTTTGGTTTAGTG+AGG - chr6_2:19963949-19963968 Msa0912110:CDS 35.0%
AATCCTCACTAAACCAAACA+AGG + chr6_2:19963955-19963974 None:intergenic 35.0%
GATGCATACAACTTTATTGC+AGG - chr6_2:19964114-19964133 Msa0912110:intron 35.0%
GGCATATATCAAAATTGCTC+AGG - chr6_2:19964135-19964154 Msa0912110:intron 35.0%
AGTGTCTGATATCTCAGAAT+GGG + chr6_2:19964303-19964322 None:intergenic 35.0%
TTCTTCCCTCTTCATAACTT+GGG + chr6_2:19964350-19964369 None:intergenic 35.0%
AACATGGTACTTCAGTAGAT+TGG + chr6_2:19964373-19964392 None:intergenic 35.0%
! TTTGGAGCACACTTTAAGAA+GGG - chr6_2:19964539-19964558 Msa0912110:intron 35.0%
AAAGCAACTTCTGTGGAAAA+TGG + chr6_2:19965037-19965056 None:intergenic 35.0%
!!! GTTCATACTTTTGGCCTTAT+TGG - chr6_2:19965148-19965167 Msa0912110:intron 35.0%
AATCATAGGTTTATCAAGCC+AGG - chr6_2:19965267-19965286 Msa0912110:intron 35.0%
ACGCAAGATCAAAATGTCAA+GGG + chr6_2:19965357-19965376 None:intergenic 35.0%
AACGCAAGATCAAAATGTCA+AGG + chr6_2:19965358-19965377 None:intergenic 35.0%
AGGGTATGTTAACAGCAAAA+TGG - chr6_2:19965473-19965492 Msa0912110:intron 35.0%
! CTGTTGAAGTTAGGGATTTT+TGG - chr6_2:19965505-19965524 Msa0912110:intron 35.0%
!! TTACACAAGAGGTTGTTTTC+AGG + chr6_2:19965675-19965694 None:intergenic 35.0%
CAACCTCTTGTGTAAAAAAC+AGG - chr6_2:19965680-19965699 Msa0912110:CDS 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr6_2:19965686-19965705 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr6_2:19965686-19965705 Msa0912110:CDS 35.0%
CATACAATTCACCAAATGGT+GGG - chr6_2:19965712-19965731 Msa0912110:CDS 35.0%
TTAGAAAGGAAAAAAACGGG+GGG + chr6_2:19965789-19965808 None:intergenic 35.0%
GTCATCCAGTTGAAAAACAT+TGG + chr6_2:19965820-19965839 None:intergenic 35.0%
CAACGAAAATACCTATACGA+TGG + chr6_2:19965953-19965972 None:intergenic 35.0%
CTCAACAAAGTGATGTGATA+TGG + chr6_2:19966253-19966272 None:intergenic 35.0%
!!! ATCATGGTCTTCTTGTTTTC+TGG - chr6_2:19966472-19966491 Msa0912110:intron 35.0%
!!! TCATGGTCTTCTTGTTTTCT+GGG - chr6_2:19966473-19966492 Msa0912110:intron 35.0%
!! AAACTCAGAAGTACTAGTCA+AGG - chr6_2:19966572-19966591 Msa0912110:intron 35.0%
AGTGAATAACTTCTTGTGTC+CGG - chr6_2:19966716-19966735 Msa0912110:intron 35.0%
AAACTGCTGAAGAAAAAGAG+AGG + chr6_2:19966980-19966999 None:intergenic 35.0%
! TTTGAAGTTCTGTCCTTGAA+AGG - chr6_2:19967208-19967227 Msa0912110:intron 35.0%
AAAACAGGTTCAACCTTTCA+AGG + chr6_2:19967224-19967243 None:intergenic 35.0%
TTTCAAAGTTGTACCACGTA+TGG - chr6_2:19967241-19967260 Msa0912110:intron 35.0%
GAAAGAGGTCCTATAAAAAG+AGG - chr6_2:19967561-19967580 Msa0912110:intron 35.0%
ATTATTCGTTATCTGTGGAC+AGG - chr6_2:19967722-19967741 Msa0912110:intron 35.0%
!! TCTAGGGTATTGAATCTATG+TGG + chr6_2:19967892-19967911 None:intergenic 35.0%
TGTAGGATATAGACCCAAAA+AGG + chr6_2:19968087-19968106 None:intergenic 35.0%
GAGAAAGTTGTCAGAAGTAA+AGG - chr6_2:19968192-19968211 Msa0912110:intron 35.0%
AAAGGATCTTTACCTGATTG+AGG - chr6_2:19968210-19968229 Msa0912110:intron 35.0%
TTTCAAAGATGACCTCAATC+AGG + chr6_2:19968225-19968244 None:intergenic 35.0%
! TTTCCTGATAATGACTAGGT+AGG - chr6_2:19968316-19968335 Msa0912110:intron 35.0%
TTCAATCAACTTCTTGAGTG+TGG - chr6_2:19968352-19968371 Msa0912110:intron 35.0%
TCAATCAACTTCTTGAGTGT+GGG - chr6_2:19968353-19968372 Msa0912110:intron 35.0%
ATGTCCTAAGAAGATTTCCA+GGG + chr6_2:19968399-19968418 None:intergenic 35.0%
AATCTTCTTAGGACATCTGA+TGG - chr6_2:19968403-19968422 Msa0912110:intron 35.0%
ATACGAATTAGCAAACATCG+GGG + chr6_2:19968479-19968498 None:intergenic 35.0%
AGCCAAAAGAATAAATGCCA+AGG + chr6_2:19968515-19968534 None:intergenic 35.0%
!! ATTTGTTTGGTGCAAACAGT+TGG - chr6_2:19968890-19968909 Msa0912110:intron 35.0%
TTCAAACAAGAATTGCGTGA+TGG - chr6_2:19969129-19969148 Msa0912110:intron 35.0%
!! AAATCGTGATTTTGGTGCAT+TGG - chr6_2:19969179-19969198 Msa0912110:intron 35.0%
AGAGAAAGAAGCTGTTACAA+AGG - chr6_2:19969329-19969348 Msa0912110:intron 35.0%
!! TTCCAAAATGCTGTTTCCAA+AGG - chr6_2:19969516-19969535 Msa0912110:intron 35.0%
GCTGTATGTGAAATACAACA+TGG - chr6_2:19969674-19969693 Msa0912110:intron 35.0%
AGCAATCCAACCTCTTTATT+AGG - chr6_2:19969716-19969735 Msa0912110:intron 35.0%
GCAATCCAACCTCTTTATTA+GGG - chr6_2:19969717-19969736 Msa0912110:intron 35.0%
ACTTTCCCTAATAAAGAGGT+TGG + chr6_2:19969725-19969744 None:intergenic 35.0%
! AGTAATTCTGGAAATAGCCA+TGG - chr6_2:19969742-19969761 Msa0912110:intron 35.0%
! GTAATTCTGGAAATAGCCAT+GGG - chr6_2:19969743-19969762 Msa0912110:intron 35.0%
CTGGTAAGGATTTCAATACA+GGG + chr6_2:19970142-19970161 None:intergenic 35.0%
ACTGGTAAGGATTTCAATAC+AGG + chr6_2:19970143-19970162 None:intergenic 35.0%
AGAATCAAGATTTCATGCAC+TGG + chr6_2:19970161-19970180 None:intergenic 35.0%
! GATGACATACCTCTTTTGTT+AGG - chr6_2:19970266-19970285 Msa0912110:intron 35.0%
! ACATACCTCTTTTGTTAGGA+TGG - chr6_2:19970270-19970289 Msa0912110:intron 35.0%
AAACACCATCCTAACAAAAG+AGG + chr6_2:19970278-19970297 None:intergenic 35.0%
! CAGAAAGTGGCTTTACAATT+GGG + chr6_2:19970527-19970546 None:intergenic 35.0%
! ACAGAAAGTGGCTTTACAAT+TGG + chr6_2:19970528-19970547 None:intergenic 35.0%
TGCTCATTTCAAACAGAAAG+TGG + chr6_2:19970540-19970559 None:intergenic 35.0%
!!! GGTTTTAAAGAAGATAGCCA+AGG + chr6_2:19970630-19970649 None:intergenic 35.0%
TCATGAAACCTTATTAGGAC+AGG + chr6_2:19970651-19970670 None:intergenic 35.0%
GACTGTCATGAAACCTTATT+AGG + chr6_2:19970656-19970675 None:intergenic 35.0%
CCTGCAACAATTATCATGAA+AGG + chr6_2:19970850-19970869 None:intergenic 35.0%
CCTTTCATGATAATTGTTGC+AGG - chr6_2:19970847-19970866 Msa0912110:intron 35.0%
!! GCAAATTTTAACACTCAGAG+GGG + chr6_2:19971008-19971027 None:intergenic 35.0%
!!! TTGATTTTTCTTTTAGGGCC+CGG - chr6_2:19971280-19971299 Msa0912110:intron 35.0%
CATGTAAGTACCATATTTCC+GGG + chr6_2:19971301-19971320 None:intergenic 35.0%
!! ACTTCTAAAGCTTCTAGGAA+AGG - chr6_2:19971443-19971462 Msa0912110:intron 35.0%
GAAAGGCAGTAAAAACTTCA+GGG - chr6_2:19971460-19971479 Msa0912110:intron 35.0%
CTCATAAACACATTGCAATG+GGG + chr6_2:19971556-19971575 None:intergenic 35.0%
CAGCTGTAGTAATCTAATAG+TGG - chr6_2:19971579-19971598 Msa0912110:intron 35.0%
TACAGTATTTGATTCTGGTC+GGG + chr6_2:19971723-19971742 None:intergenic 35.0%
GTACAGTATTTGATTCTGGT+CGG + chr6_2:19971724-19971743 None:intergenic 35.0%
CCAGAATCAAATACTGTACT+CGG - chr6_2:19971725-19971744 Msa0912110:five_prime_UTR 35.0%
AACAGGAAGAATGTCTTGAA+TGG + chr6_2:19971784-19971803 None:intergenic 35.0%
TAGATTTACCTCAGGAATGA+CGG + chr6_2:19971811-19971830 None:intergenic 35.0%
CAAATGCTTAGATTTACCTC+AGG + chr6_2:19971819-19971838 None:intergenic 35.0%
GTCATAAGCAATTTCACATC+TGG - chr6_2:19971885-19971904 Msa0912110:five_prime_UTR 35.0%
GCAATTGAAATAATTGCTGC+TGG + chr6_2:19971971-19971990 None:intergenic 35.0%
ATTTCAATTGCCAGCTAACT+TGG - chr6_2:19971980-19971999 Msa0912110:five_prime_UTR 35.0%
AGGTGATTGCAAAACATTTG+AGG - chr6_2:19972106-19972125 Msa0912110:five_prime_UTR 35.0%
AACAGTGTGACTGAAAACAT+AGG + chr6_2:19972191-19972210 None:intergenic 35.0%
TATGGTTGGGATTGGAGAAA+TGG + chr6_2:19961723-19961742 None:intergenic 40.0%
TGAAGAAGGTGGTTATGGTT+GGG + chr6_2:19961736-19961755 None:intergenic 40.0%
ATGAAGAAGGTGGTTATGGT+TGG + chr6_2:19961737-19961756 None:intergenic 40.0%
TGAGATGAAGAAGGTGGTTA+TGG + chr6_2:19961741-19961760 None:intergenic 40.0%
TGGAGATGGAGAAGTTAGTT+GGG + chr6_2:19961866-19961885 None:intergenic 40.0%
TTGGAGATGGAGAAGTTAGT+TGG + chr6_2:19961867-19961886 None:intergenic 40.0%
! GAACACCGATTGTTGTTGTA+AGG - chr6_2:19962069-19962088 Msa0912110:CDS 40.0%
! GTAAGGAGATTGGTTCAAAC+TGG - chr6_2:19962086-19962105 Msa0912110:CDS 40.0%
TTCAAACTGGAATCGCGTTT+GGG - chr6_2:19962099-19962118 Msa0912110:intron 40.0%
!! TGATAAGCGTTTTGATCGAG+CGG - chr6_2:19962145-19962164 Msa0912110:intron 40.0%
ACGCAATAGGCTACAAGATA+AGG - chr6_2:19962647-19962666 Msa0912110:intron 40.0%
GACACTGTTTGTGACAACAT+AGG - chr6_2:19962858-19962877 Msa0912110:CDS 40.0%
!! GTGGCATAAGTTTTGTGAGA+CGG - chr6_2:19963106-19963125 Msa0912110:intron 40.0%
!! TTGTTTCTGTTAGCATGGAG+AGG - chr6_2:19963440-19963459 Msa0912110:intron 40.0%
TGCAGAGCTAAGGAAGATAT+TGG - chr6_2:19963594-19963613 Msa0912110:intron 40.0%
AGAGCTAAGGAAGATATTGG+TGG - chr6_2:19963597-19963616 Msa0912110:intron 40.0%
AGGAAGATATTGGTGGAACT+TGG - chr6_2:19963604-19963623 Msa0912110:intron 40.0%
AAATAACCAGCGTGACATAC+CGG + chr6_2:19963631-19963650 None:intergenic 40.0%
AGTCTGTGACATATCTGAGA+TGG + chr6_2:19963760-19963779 None:intergenic 40.0%
GTGTCTGATATCTCAGAATG+GGG + chr6_2:19964302-19964321 None:intergenic 40.0%
CAGTGTCTGATATCTCAGAA+TGG + chr6_2:19964304-19964323 None:intergenic 40.0%
GTTCTTCCCTCTTCATAACT+TGG + chr6_2:19964351-19964370 None:intergenic 40.0%
CTTCTTAAAGTGTGCTCCAA+AGG + chr6_2:19964540-19964559 None:intergenic 40.0%
!! CTTTGGAGCACACTTTAAGA+AGG - chr6_2:19964538-19964557 Msa0912110:intron 40.0%
! TTGGAGCACACTTTAAGAAG+GGG - chr6_2:19964540-19964559 Msa0912110:intron 40.0%
AGCTCATTTAGATACGATGG+TGG + chr6_2:19964989-19965008 None:intergenic 40.0%
GAGAGCTCATTTAGATACGA+TGG + chr6_2:19964992-19965011 None:intergenic 40.0%
CATGTTGAAAGCAACTTCTG+TGG + chr6_2:19965044-19965063 None:intergenic 40.0%
!! ACAAGAACTTGGTTTGTCCT+TGG - chr6_2:19965069-19965088 Msa0912110:intron 40.0%
! CTCTGAGAAAATTTCAGCCA+AGG + chr6_2:19965089-19965108 None:intergenic 40.0%
GCTGTTAAAGTACAAAGACC+AGG - chr6_2:19965314-19965333 Msa0912110:intron 40.0%
! TTGATCTTGCGTTTTATGGC+TGG - chr6_2:19965365-19965384 Msa0912110:intron 40.0%
! TGATCTTGCGTTTTATGGCT+GGG - chr6_2:19965366-19965385 Msa0912110:intron 40.0%
ATTCTAATAGTTGCCACCGA+AGG - chr6_2:19965589-19965608 Msa0912110:intron 40.0%
TTCTAATAGTTGCCACCGAA+GGG - chr6_2:19965590-19965609 Msa0912110:intron 40.0%
GTTGTTGTCATGTGACTGAA+AGG - chr6_2:19965635-19965654 Msa0912110:CDS 40.0%
GCTGCATACAATTCACCAAA+TGG - chr6_2:19965708-19965727 Msa0912110:CDS 40.0%
GCATACAATTCACCAAATGG+TGG - chr6_2:19965711-19965730 Msa0912110:CDS 40.0%
TAGAAAGGAAAAAAACGGGG+GGG + chr6_2:19965788-19965807 None:intergenic 40.0%
AATTAGGGGGCCTAATTCAT+AGG - chr6_2:19965868-19965887 Msa0912110:intron 40.0%
AACCAATGCATACCCGAAAA+AGG + chr6_2:19966323-19966342 None:intergenic 40.0%
ATGTATGGGGTGATAGTATG+TGG - chr6_2:19966448-19966467 Msa0912110:intron 40.0%
TGTATGGGGTGATAGTATGT+GGG - chr6_2:19966449-19966468 Msa0912110:intron 40.0%
!! AGAAGTACTAGTCAAGGACA+AGG - chr6_2:19966578-19966597 Msa0912110:intron 40.0%
GAATTAGTTGTGCTTCTGTC+AGG - chr6_2:19966757-19966776 Msa0912110:intron 40.0%
AGAAAAAGAGAGGAGAGAGA+GGG + chr6_2:19966970-19966989 None:intergenic 40.0%
AAGAAAAAGAGAGGAGAGAG+AGG + chr6_2:19966971-19966990 None:intergenic 40.0%
TTGAATACAGGCTTGAATGC+AGG - chr6_2:19967115-19967134 Msa0912110:intron 40.0%
CATGCAATGGTATCAAGTTC+AGG - chr6_2:19967159-19967178 Msa0912110:intron 40.0%
CAGGTAAGTGCATGCTATTA+AGG - chr6_2:19967178-19967197 Msa0912110:intron 40.0%
! CGTGGTACAACTTTGAAAAC+AGG + chr6_2:19967239-19967258 None:intergenic 40.0%
! TTCTAAAGGATCAGAGAGCA+GGG + chr6_2:19967302-19967321 None:intergenic 40.0%
! TTTCTAAAGGATCAGAGAGC+AGG + chr6_2:19967303-19967322 None:intergenic 40.0%
ATCAATGAGGTCCTATAACG+AGG + chr6_2:19967352-19967371 None:intergenic 40.0%
TCTGTGGACAGGAACTTATA+TGG - chr6_2:19967733-19967752 Msa0912110:intron 40.0%
! TGGTTCTATACAAGATGTGG+TGG - chr6_2:19967753-19967772 Msa0912110:five_prime_UTR 40.0%
GTGTACTCTGTGTACATCAA+AGG + chr6_2:19967781-19967800 None:intergenic 40.0%
AAATTCACTGTTCATCCCAG+TGG - chr6_2:19967913-19967932 Msa0912110:intron 40.0%
!! GTTCTAGCTCACAACATTAC+AGG + chr6_2:19967992-19968011 None:intergenic 40.0%
ACTCCTACCTAGTCATTATC+AGG + chr6_2:19968322-19968341 None:intergenic 40.0%
TAAGAAGATTTCCAGGGTGT+GGG + chr6_2:19968393-19968412 None:intergenic 40.0%
GATGTCCTAAGAAGATTTCC+AGG + chr6_2:19968400-19968419 None:intergenic 40.0%
ATTAGCAAACATCGGGGATT+TGG + chr6_2:19968473-19968492 None:intergenic 40.0%
GACACAAATGAACAGTGCAT+TGG - chr6_2:19968778-19968797 Msa0912110:intron 40.0%
!! ATCTGGTAATGGTTTGGGTA+AGG - chr6_2:19968832-19968851 Msa0912110:intron 40.0%
!! TCTGGTAATGGTTTGGGTAA+GGG - chr6_2:19968833-19968852 Msa0912110:intron 40.0%
! AAACAATTCCCCCTACGTTT+TGG - chr6_2:19969082-19969101 Msa0912110:intron 40.0%
AAAATCTGGCCAAAACGTAG+GGG + chr6_2:19969094-19969113 None:intergenic 40.0%
CAAAATCTGGCCAAAACGTA+GGG + chr6_2:19969095-19969114 None:intergenic 40.0%
!!! TGATTTTGGTGCATTGGCTA+CGG - chr6_2:19969185-19969204 Msa0912110:intron 40.0%
CAAATAAACCTCAAGAACGG+AGG + chr6_2:19969460-19969479 None:intergenic 40.0%
!! CTCCTTTGGAAACAGCATTT+TGG + chr6_2:19969521-19969540 None:intergenic 40.0%
GCTGATATTACGAACTCCTT+TGG + chr6_2:19969535-19969554 None:intergenic 40.0%
GGAGTTCGTAATATCAGCTT+TGG - chr6_2:19969537-19969556 Msa0912110:intron 40.0%
AAGAGGTTGGATTGCTATGT+AGG + chr6_2:19969712-19969731 None:intergenic 40.0%
!! ACTTCTCACTTGTTATCCGA+AGG - chr6_2:19969886-19969905 Msa0912110:intron 40.0%
TGTATGGAAAGCTCTACCTT+CGG + chr6_2:19969905-19969924 None:intergenic 40.0%
AAGGTAGAGCTTTCCATACA+AGG - chr6_2:19969905-19969924 Msa0912110:five_prime_UTR 40.0%
GTACTGGAAGGAATTGCAAT+TGG - chr6_2:19969990-19970009 Msa0912110:intron 40.0%
TAACCCAGACTACAAAGTCT+TGG - chr6_2:19970016-19970035 Msa0912110:intron 40.0%
AACCCAGACTACAAAGTCTT+GGG - chr6_2:19970017-19970036 Msa0912110:intron 40.0%
TACCCAAGACTTTGTAGTCT+GGG + chr6_2:19970022-19970041 None:intergenic 40.0%
CAAAGAAGATCTAAGCTGAG+GGG + chr6_2:19970087-19970106 None:intergenic 40.0%
CCAAAGAAGATCTAAGCTGA+GGG + chr6_2:19970088-19970107 None:intergenic 40.0%
TCCAAAGAAGATCTAAGCTG+AGG + chr6_2:19970089-19970108 None:intergenic 40.0%
! CAAGATTTCATGCACTGGTA+AGG + chr6_2:19970156-19970175 None:intergenic 40.0%
CATTGACATAAACCAGTCTG+AGG + chr6_2:19970476-19970495 None:intergenic 40.0%
!! CTCAGACTGGTTTATGTCAA+TGG - chr6_2:19970474-19970493 Msa0912110:intron 40.0%
!!! AGGTCTTATCTGTTTTGGCA+CGG + chr6_2:19970682-19970701 None:intergenic 40.0%
TCATGATAATTGTTGCAGGG+TGG - chr6_2:19970851-19970870 Msa0912110:intron 40.0%
GTGCATCTAAACCCTACATT+TGG + chr6_2:19971038-19971057 None:intergenic 40.0%
ATGTAGGGTTTAGATGCACT+TGG - chr6_2:19971039-19971058 Msa0912110:intron 40.0%
TGTAGGGTTTAGATGCACTT+GGG - chr6_2:19971040-19971059 Msa0912110:intron 40.0%
ATAGCAATAGCATAAGGCGT+TGG + chr6_2:19971164-19971183 None:intergenic 40.0%
GCCTTATGCTATTGCTATCA+GGG - chr6_2:19971166-19971185 Msa0912110:intron 40.0%
CCTTATGCTATTGCTATCAG+GGG - chr6_2:19971167-19971186 Msa0912110:intron 40.0%
GGAAAGGCAGTAAAAACTTC+AGG - chr6_2:19971459-19971478 Msa0912110:intron 40.0%
ACTACATTGCTACACTGCAT+AGG - chr6_2:19971518-19971537 Msa0912110:intron 40.0%
CCGAGTACAGTATTTGATTC+TGG + chr6_2:19971728-19971747 None:intergenic 40.0%
GAATCAAATACTGTACTCGG+AGG - chr6_2:19971728-19971747 Msa0912110:five_prime_UTR 40.0%
!! GGTTGTTTTGTCAGTGTTAG+TGG + chr6_2:19971863-19971882 None:intergenic 40.0%
ATGTAAATTTCAGCTCCCAC+CGG - chr6_2:19971941-19971960 Msa0912110:five_prime_UTR 40.0%
AATAATTGCTGCTGGGATTC+CGG + chr6_2:19971963-19971982 None:intergenic 40.0%
AACTGTTGAACCAAGTTAGC+TGG + chr6_2:19971993-19972012 None:intergenic 40.0%
TGCTGCGAGAACTATCAAAA+GGG - chr6_2:19972025-19972044 Msa0912110:five_prime_UTR 40.0%
AACTAATTGACCGAGAGTAG+AGG - chr6_2:19972239-19972258 Msa0912110:five_prime_UTR 40.0%
ACTAATTGACCGAGAGTAGA+GGG - chr6_2:19972240-19972259 Msa0912110:five_prime_UTR 40.0%
GAGTTAGAATCCTCTCCATT+TGG - chr6_2:19972277-19972296 Msa0912110:five_prime_UTR 40.0%
AAGGTGGTTATGGTTGGGAT+TGG + chr6_2:19961731-19961750 None:intergenic 45.0%
GAGGGAAATGAGAGAGAAGT+TGG + chr6_2:19961834-19961853 None:intergenic 45.0%
ACGGTTAGAGGAATTGGAGA+TGG + chr6_2:19961880-19961899 None:intergenic 45.0%
CGTAAACGAGTCATCGTTAC+CGG + chr6_2:19961958-19961977 None:intergenic 45.0%
CGGTAACGATGACTCGTTTA+CGG - chr6_2:19961956-19961975 Msa0912110:three_prime_UTR 45.0%
ACTCGTTTACGGCAAAGTCA+GGG - chr6_2:19961967-19961986 Msa0912110:three_prime_UTR 45.0%
GTTCAAACTGGAATCGCGTT+TGG - chr6_2:19962098-19962117 Msa0912110:intron 45.0%
! TTGGGAAGTGGTTTGGATTG+AGG - chr6_2:19962117-19962136 Msa0912110:intron 45.0%
GATATTGGTGGAACTTGGTC+CGG - chr6_2:19963609-19963628 Msa0912110:intron 45.0%
ATCTCAGAATGGGGTTCCTA+CGG + chr6_2:19964293-19964312 None:intergenic 45.0%
TGAAGGAGTAAGTAGGTTCG+GGG + chr6_2:19964448-19964467 None:intergenic 45.0%
GTGAAGGAGTAAGTAGGTTC+GGG + chr6_2:19964449-19964468 None:intergenic 45.0%
GGTGAAGGAGTAAGTAGGTT+CGG + chr6_2:19964450-19964469 None:intergenic 45.0%
! TGAGGTTGGTTAGATGGTTG+GGG + chr6_2:19964471-19964490 None:intergenic 45.0%
! GTGAGGTTGGTTAGATGGTT+GGG + chr6_2:19964472-19964491 None:intergenic 45.0%
GAAGTAGTATGTGAGACGCT+TGG + chr6_2:19964494-19964513 None:intergenic 45.0%
! ATATGCTGTTAAGGGCTAGC+AGG - chr6_2:19964824-19964843 Msa0912110:intron 45.0%
! CTTGGGCAGGTTCATACTTT+TGG - chr6_2:19965139-19965158 Msa0912110:intron 45.0%
GAAATTGCAGCTTGAACACC+TGG + chr6_2:19965335-19965354 None:intergenic 45.0%
TCTAATAGTTGCCACCGAAG+GGG - chr6_2:19965591-19965610 Msa0912110:intron 45.0%
GTCATGTGACTGAAAGGTCA+CGG - chr6_2:19965641-19965660 Msa0912110:CDS 45.0%
TCATGTGACTGAAAGGTCAC+GGG - chr6_2:19965642-19965661 Msa0912110:CDS 45.0%
AGAAAGGAAAAAAACGGGGG+GGG + chr6_2:19965787-19965806 None:intergenic 45.0%
!! GGCATGAGTGTTGATGAGAT+AGG + chr6_2:19966167-19966186 None:intergenic 45.0%
! AGTGGGCATCAAGCCTTTTT+CGG - chr6_2:19966307-19966326 Msa0912110:intron 45.0%
!!! AGCCTTTTTCGGGTATGCAT+TGG - chr6_2:19966318-19966337 Msa0912110:intron 45.0%
GGTGATAGTATGTGGGATCA+TGG - chr6_2:19966456-19966475 Msa0912110:intron 45.0%
AAAAAGAGAGGAGAGAGAGG+GGG + chr6_2:19966968-19966987 None:intergenic 45.0%
GAAAAAGAGAGGAGAGAGAG+GGG + chr6_2:19966969-19966988 None:intergenic 45.0%
TACCACGTATGGTCTGAAAG+TGG - chr6_2:19967252-19967271 Msa0912110:intron 45.0%
ATCCACTTTCAGACCATACG+TGG + chr6_2:19967257-19967276 None:intergenic 45.0%
CCTCAATCCATTCCATGACA+AGG + chr6_2:19967816-19967835 None:intergenic 45.0%
!! CCTTGTCATGGAATGGATTG+AGG - chr6_2:19967813-19967832 Msa0912110:intron 45.0%
CCATCTCATGTATTGCCACT+GGG + chr6_2:19967931-19967950 None:intergenic 45.0%
TCCATCTCATGTATTGCCAC+TGG + chr6_2:19967932-19967951 None:intergenic 45.0%
GTGGCAATACATGAGATGGA+CGG - chr6_2:19967932-19967951 Msa0912110:intron 45.0%
CTAGCTCACAACATTACAGG+AGG + chr6_2:19967989-19968008 None:intergenic 45.0%
! AAAGGCACGCCGTATCAATT+TGG + chr6_2:19968069-19968088 None:intergenic 45.0%
! ATTGATACGGCGTGCCTTTT+TGG - chr6_2:19968070-19968089 Msa0912110:intron 45.0%
! TTGATACGGCGTGCCTTTTT+GGG - chr6_2:19968071-19968090 Msa0912110:intron 45.0%
CTAAGAAGATTTCCAGGGTG+TGG + chr6_2:19968394-19968413 None:intergenic 45.0%
CACACCCTGGAAATCTTCTT+AGG - chr6_2:19968392-19968411 Msa0912110:intron 45.0%
!! CTGGTAATGGTTTGGGTAAG+GGG - chr6_2:19968834-19968853 Msa0912110:intron 45.0%
! TTTGGTGCAAACAGTTGGAG+TGG - chr6_2:19968895-19968914 Msa0912110:intron 45.0%
AAATCTGGCCAAAACGTAGG+GGG + chr6_2:19969093-19969112 None:intergenic 45.0%
CCAAAATCTGGCCAAAACGT+AGG + chr6_2:19969096-19969115 None:intergenic 45.0%
!! CCTACGTTTTGGCCAGATTT+TGG - chr6_2:19969093-19969112 Msa0912110:intron 45.0%
TCACCTGTCATGCCAAAATC+TGG + chr6_2:19969108-19969127 None:intergenic 45.0%
CTACGGACTTTGTCACTCTT+GGG - chr6_2:19969202-19969221 Msa0912110:intron 45.0%
ACAGCTTCTTTCTCTGCAGT+TGG + chr6_2:19969324-19969343 None:intergenic 45.0%
! GCTGTTACAAAGGCTTTGAC+AGG - chr6_2:19969339-19969358 Msa0912110:intron 45.0%
TTAGCATTCCTCCGTTCTTG+AGG - chr6_2:19969449-19969468 Msa0912110:intron 45.0%
!! TATCAGCTTTGGAGACCTTC+TGG - chr6_2:19969548-19969567 Msa0912110:intron 45.0%
!! ATCAGCTTTGGAGACCTTCT+GGG - chr6_2:19969549-19969568 Msa0912110:intron 45.0%
TTGTTCCTAAGTCTCCCAGA+AGG + chr6_2:19969566-19969585 None:intergenic 45.0%
GTATCAGCGAAGAGCTTACA+TGG + chr6_2:19969589-19969608 None:intergenic 45.0%
CAATTCCTTCCAGTACAGCA+AGG + chr6_2:19969986-19970005 None:intergenic 45.0%
CTACCCAAGACTTTGTAGTC+TGG + chr6_2:19970023-19970042 None:intergenic 45.0%
TCTTGGGTAGTACTTACCCA+TGG - chr6_2:19970033-19970052 Msa0912110:intron 45.0%
!! GCACTTTTCTGGCAATCCAT+GGG + chr6_2:19970052-19970071 None:intergenic 45.0%
!! AGCACTTTTCTGGCAATCCA+TGG + chr6_2:19970053-19970072 None:intergenic 45.0%
! GCTGTCAGTAAGCACTTTTC+TGG + chr6_2:19970063-19970082 None:intergenic 45.0%
CCCTCAGCTTAGATCTTCTT+TGG - chr6_2:19970085-19970104 Msa0912110:intron 45.0%
CTGTCAGCAAAGACTCAAGT+CGG + chr6_2:19970311-19970330 None:intergenic 45.0%
ACTTGAGTCTTTGCTGACAG+AGG - chr6_2:19970311-19970330 Msa0912110:intron 45.0%
GAGGATGAAAATCGAGTCTG+AGG + chr6_2:19970457-19970476 None:intergenic 45.0%
! CTCGATTTTCATCCTCAGAC+TGG - chr6_2:19970461-19970480 Msa0912110:five_prime_UTR 45.0%
! TGAAGGCGCAGATTCGAAAA+TGG - chr6_2:19970718-19970737 Msa0912110:intron 45.0%
!! CAATAGCATAAGGCGTTGGA+AGG + chr6_2:19971160-19971179 None:intergenic 45.0%
CGCCTTATGCTATTGCTATC+AGG - chr6_2:19971165-19971184 Msa0912110:intron 45.0%
CCCCTGATAGCAATAGCATA+AGG + chr6_2:19971170-19971189 None:intergenic 45.0%
!!! TCTTTTAGGGCCCGGAAATA+TGG - chr6_2:19971288-19971307 Msa0912110:intron 45.0%
CAGTGTAGCAATGTAGTCTG+TGG + chr6_2:19971515-19971534 None:intergenic 45.0%
! TCAGGAATGACGGAAAGAAC+AGG + chr6_2:19971801-19971820 None:intergenic 45.0%
TGTTCTTTCCGTCATTCCTG+AGG - chr6_2:19971800-19971819 Msa0912110:intron 45.0%
CTGCTGCGAGAACTATCAAA+AGG - chr6_2:19972024-19972043 Msa0912110:five_prime_UTR 45.0%
TCACACTGTTAGCCGTCTAA+TGG - chr6_2:19972201-19972220 Msa0912110:five_prime_UTR 45.0%
CACACTGTTAGCCGTCTAAT+GGG - chr6_2:19972202-19972221 Msa0912110:five_prime_UTR 45.0%
!!! ATTCTTTATATTTTATTTTT+AGG - chr6_2:19966637-19966656 Msa0912110:intron 5.0%
GCGAAGACGGTTAGAGGAAT+TGG + chr6_2:19961886-19961905 None:intergenic 50.0%
ATCGTTACCGGAGATGGAAG+CGG + chr6_2:19961946-19961965 None:intergenic 50.0%
GACTCGTTTACGGCAAAGTC+AGG - chr6_2:19961966-19961985 Msa0912110:three_prime_UTR 50.0%
CTTATTCGACCTAAGCGCGT+CGG - chr6_2:19961992-19962011 Msa0912110:exon 50.0%
ATCGCGTTTGGGAAGTGGTT+TGG - chr6_2:19962110-19962129 Msa0912110:intron 50.0%
TCGAGCGGATGAGATGTTTC+AGG - chr6_2:19962160-19962179 Msa0912110:intron 50.0%
AGGTTAGAGCTGCAGAGCTA+AGG - chr6_2:19963584-19963603 Msa0912110:intron 50.0%
TCATATGTCAGCGCTTCCGT+AGG - chr6_2:19964274-19964293 Msa0912110:intron 50.0%
GTTGGGGTGAAGGAGTAAGT+AGG + chr6_2:19964455-19964474 None:intergenic 50.0%
TGGTTAGATGGTTGGGGTGA+AGG + chr6_2:19964465-19964484 None:intergenic 50.0%
! GGTGAGGTTGGTTAGATGGT+TGG + chr6_2:19964473-19964492 None:intergenic 50.0%
! GCTTGGTGAGGTTGGTTAGA+TGG + chr6_2:19964477-19964496 None:intergenic 50.0%
! AGTATGTGAGACGCTTGGTG+AGG + chr6_2:19964489-19964508 None:intergenic 50.0%
! TTAAGGGCTAGCAGGTGGTT+TGG - chr6_2:19964832-19964851 Msa0912110:intron 50.0%
! CTGTTGCTGCTGCTTCTCTT+GGG - chr6_2:19965122-19965141 Msa0912110:intron 50.0%
CTAATAGTTGCCACCGAAGG+GGG - chr6_2:19965592-19965611 Msa0912110:intron 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr6_2:19965620-19965639 None:intergenic 50.0%
ACAAAGCTCCGTGATACCCA+GGG + chr6_2:19965751-19965770 None:intergenic 50.0%
! TATCACGGAGCTTTGTGCAC+CGG - chr6_2:19965755-19965774 Msa0912110:intron 50.0%
AAAGGAAAAAAACGGGGGGG+GGG + chr6_2:19965785-19965804 None:intergenic 50.0%
GAAAGGAAAAAAACGGGGGG+GGG + chr6_2:19965786-19965805 None:intergenic 50.0%
! GTGGGCATCAAGCCTTTTTC+GGG - chr6_2:19966308-19966327 Msa0912110:intron 50.0%
ACAGGCTTGAATGCAGGAGA+TGG - chr6_2:19967121-19967140 Msa0912110:intron 50.0%
CTACCTCCATGCCTCGTTAT+AGG - chr6_2:19967338-19967357 Msa0912110:intron 50.0%
TGAGGTCCTATAACGAGGCA+TGG + chr6_2:19967347-19967366 None:intergenic 50.0%
CACAGAGTACACAACTCGCA+AGG - chr6_2:19967789-19967808 Msa0912110:intron 50.0%
AACTCGCAAGGTCCTTGTCA+TGG - chr6_2:19967801-19967820 Msa0912110:intron 50.0%
GCAAGGTCCTTGTCATGGAA+TGG - chr6_2:19967806-19967825 Msa0912110:intron 50.0%
CCCAGTGGCAATACATGAGA+TGG - chr6_2:19967928-19967947 Msa0912110:intron 50.0%
!! TGGCCAGATTTTGGCATGAC+AGG - chr6_2:19969102-19969121 Msa0912110:intron 50.0%
GCTACGGACTTTGTCACTCT+TGG - chr6_2:19969201-19969220 Msa0912110:intron 50.0%
GCTTCTTTCTCTGCAGTTGG+TGG + chr6_2:19969321-19969340 None:intergenic 50.0%
! TTCTGGAAATAGCCATGGGC+AGG - chr6_2:19969747-19969766 Msa0912110:intron 50.0%
! TGTCTGTAGCCTTGCTGTAC+TGG - chr6_2:19969974-19969993 Msa0912110:intron 50.0%
! TGTAGCCTTGCTGTACTGGA+AGG - chr6_2:19969978-19969997 Msa0912110:intron 50.0%
TTCGAATCTGCGCCTTCAGA+TGG + chr6_2:19970716-19970735 None:intergenic 50.0%
! TGTTGCAGGGTGGATTTGTG+AGG - chr6_2:19970861-19970880 Msa0912110:intron 50.0%
! TCTTGCAGCAGCTGTTTCCA+AGG + chr6_2:19971073-19971092 None:intergenic 50.0%
ATGAGAGCTCCCTCTACTCT+CGG + chr6_2:19972252-19972271 None:intergenic 50.0%
CGAGTCATCGTTACCGGAGA+TGG + chr6_2:19961952-19961971 None:intergenic 55.0%
CTGGAATCGCGTTTGGGAAG+TGG - chr6_2:19962105-19962124 Msa0912110:intron 55.0%
! TGTGAGACGCTTGGTGAGGT+TGG + chr6_2:19964485-19964504 None:intergenic 55.0%
! TGCTGTTAAGGGCTAGCAGG+TGG - chr6_2:19964827-19964846 Msa0912110:intron 55.0%
CCAAGAGAAGCAGCAGCAAC+AGG + chr6_2:19965124-19965143 None:intergenic 55.0%
! CCTGTTGCTGCTGCTTCTCT+TGG - chr6_2:19965121-19965140 Msa0912110:intron 55.0%
! CTTGCGTTTTATGGCTGGGC+TGG - chr6_2:19965370-19965389 Msa0912110:intron 55.0%
!!! GTTTTATGGCTGGGCTGGCT+AGG - chr6_2:19965375-19965394 Msa0912110:intron 55.0%
GATACCCAGGGTTCGGGAAA+GGG + chr6_2:19965739-19965758 None:intergenic 55.0%
TGATACCCAGGGTTCGGGAA+AGG + chr6_2:19965740-19965759 None:intergenic 55.0%
TTCCCGAACCCTGGGTATCA+CGG - chr6_2:19965740-19965759 Msa0912110:intron 55.0%
CACAAAGCTCCGTGATACCC+AGG + chr6_2:19965752-19965771 None:intergenic 55.0%
! ATCACGGAGCTTTGTGCACC+GGG - chr6_2:19965756-19965775 Msa0912110:intron 55.0%
TGCAGGCAGTTGTCGATGAG+TGG - chr6_2:19966289-19966308 Msa0912110:CDS 55.0%
GCAGGCAGTTGTCGATGAGT+GGG - chr6_2:19966290-19966309 Msa0912110:CDS 55.0%
GGTCCTATAACGAGGCATGG+AGG + chr6_2:19967344-19967363 None:intergenic 55.0%
TATCATGCAGACCCACACCC+TGG - chr6_2:19968379-19968398 Msa0912110:intron 55.0%
! GGAGACCTTCTGGGAGACTT+AGG - chr6_2:19969558-19969577 Msa0912110:intron 55.0%
! TGCACTTGGGCTTGCTTCCT+TGG - chr6_2:19971053-19971072 Msa0912110:intron 55.0%
ATTGCTGCTGGGATTCCGGT+GGG + chr6_2:19971959-19971978 None:intergenic 55.0%
AATTGCTGCTGGGATTCCGG+TGG + chr6_2:19971960-19971979 None:intergenic 55.0%
TGATAGTTCTCGCAGCAGCG+CGG + chr6_2:19972022-19972041 None:intergenic 55.0%
TGGCGGAGTAGCAACGACGA+CGG + chr6_2:19961911-19961930 None:intergenic 60.0%
! AGCGGTGGTGGTGCATTTGG+CGG + chr6_2:19961928-19961947 None:intergenic 60.0%
! GGAAGCGGTGGTGGTGCATT+TGG + chr6_2:19961931-19961950 None:intergenic 60.0%
ACCACCACCGCTTCCATCTC+CGG - chr6_2:19961936-19961955 Msa0912110:three_prime_UTR 60.0%
GTTACCGGAGATGGAAGCGG+TGG + chr6_2:19961943-19961962 None:intergenic 60.0%
TTTCCGCTTCCGACGCGCTT+AGG + chr6_2:19962004-19962023 None:intergenic 60.0%
CTTGGTCCGGTATGTCACGC+TGG - chr6_2:19963622-19963641 Msa0912110:intron 60.0%
GAAGCAGCAGCAACAGGCTC+AGG + chr6_2:19965118-19965137 None:intergenic 60.0%
! TGCTGCTGCTTCTCTTGGGC+AGG - chr6_2:19965126-19965145 Msa0912110:intron 60.0%
CAAGCCAGGCTTCGCAGAAC+AGG - chr6_2:19965281-19965300 Msa0912110:intron 60.0%
CTGTCCTGTTCTGCGAAGCC+TGG + chr6_2:19965288-19965307 None:intergenic 60.0%
CAGGCTTCGCAGAACAGGAC+AGG - chr6_2:19965286-19965305 Msa0912110:intron 60.0%
TTGCGCCAAGGTTCCCCCTT+CGG + chr6_2:19965608-19965627 None:intergenic 60.0%
AAGGGGGAACCTTGGCGCAA+CGG - chr6_2:19965608-19965627 Msa0912110:intron 60.0%
CGGGAAAGGGTCCCACCATT+TGG + chr6_2:19965726-19965745 None:intergenic 60.0%
CTCCGTGATACCCAGGGTTC+GGG + chr6_2:19965745-19965764 None:intergenic 60.0%
GCTCCGTGATACCCAGGGTT+CGG + chr6_2:19965746-19965765 None:intergenic 60.0%
AGCCATGGGCAGGACACCAA+AGG - chr6_2:19969757-19969776 Msa0912110:intron 60.0%
!! AGCCTTTGGTGTCCTGCCCA+TGG + chr6_2:19969762-19969781 None:intergenic 60.0%
GATAGTTCTCGCAGCAGCGC+GGG + chr6_2:19972021-19972040 None:intergenic 60.0%
ACGGCGGCGAAGACGGTTAG+AGG + chr6_2:19961892-19961911 None:intergenic 65.0%
AACGACGACGGCGGCGAAGA+CGG + chr6_2:19961899-19961918 None:intergenic 65.0%
CGGAGTAGCAACGACGACGG+CGG + chr6_2:19961908-19961927 None:intergenic 65.0%
ACCGGAGATGGAAGCGGTGG+TGG + chr6_2:19961940-19961959 None:intergenic 65.0%
CGACCTAAGCGCGTCGGAAG+CGG - chr6_2:19961998-19962017 Msa0912110:exon 65.0%
TGCCACCGAAGGGGGAACCT+TGG - chr6_2:19965600-19965619 Msa0912110:intron 65.0%
TGGGACCCTTTCCCGAACCC+TGG - chr6_2:19965731-19965750 Msa0912110:intron 65.0%
GGGACCCTTTCCCGAACCCT+GGG - chr6_2:19965732-19965751 Msa0912110:intron 65.0%
!! GCTGGGCTGGCTAGGAGAGC+AGG - chr6_2:19965383-19965402 Msa0912110:intron 70.0%
CGCCAAGGTTCCCCCTTCGG+TGG + chr6_2:19965605-19965624 None:intergenic 70.0%
AAAACGGGGGGGGGGCAGCC+CGG + chr6_2:19965777-19965796 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 19961699 19972367 19961699 ID=Msa0912110;Name=Msa0912110
chr6_2 mRNA 19961699 19972367 19961699 ID=Msa0912110-mRNA-1;Parent=Msa0912110;Name=Msa0912110-mRNA-1;_AED=0.19;_eAED=0.19;_QI=1058|0.63|0.78|0.86|0.86|0.82|23|309|439
chr6_2 exon 19961699 19962112 19961699 ID=Msa0912110-mRNA-1:exon:4094;Parent=Msa0912110-mRNA-1
chr6_2 exon 19962245 19962364 19962245 ID=Msa0912110-mRNA-1:exon:4093;Parent=Msa0912110-mRNA-1
chr6_2 exon 19962851 19963021 19962851 ID=Msa0912110-mRNA-1:exon:4092;Parent=Msa0912110-mRNA-1
chr6_2 exon 19963107 19963112 19963107 ID=Msa0912110-mRNA-1:exon:4091;Parent=Msa0912110-mRNA-1
chr6_2 exon 19963156 19963197 19963156 ID=Msa0912110-mRNA-1:exon:4090;Parent=Msa0912110-mRNA-1
chr6_2 exon 19963288 19963392 19963288 ID=Msa0912110-mRNA-1:exon:4089;Parent=Msa0912110-mRNA-1
chr6_2 exon 19963734 19963778 19963734 ID=Msa0912110-mRNA-1:exon:4088;Parent=Msa0912110-mRNA-1
chr6_2 exon 19963942 19964099 19963942 ID=Msa0912110-mRNA-1:exon:4087;Parent=Msa0912110-mRNA-1
chr6_2 exon 19964159 19964209 19964159 ID=Msa0912110-mRNA-1:exon:4086;Parent=Msa0912110-mRNA-1
chr6_2 exon 19964243 19964248 19964243 ID=Msa0912110-mRNA-1:exon:4085;Parent=Msa0912110-mRNA-1
chr6_2 exon 19964706 19964755 19964706 ID=Msa0912110-mRNA-1:exon:4084;Parent=Msa0912110-mRNA-1
chr6_2 exon 19964843 19965035 19964843 ID=Msa0912110-mRNA-1:exon:4083;Parent=Msa0912110-mRNA-1
chr6_2 exon 19965431 19965448 19965431 ID=Msa0912110-mRNA-1:exon:4082;Parent=Msa0912110-mRNA-1
chr6_2 exon 19965624 19965732 19965624 ID=Msa0912110-mRNA-1:exon:4081;Parent=Msa0912110-mRNA-1
chr6_2 exon 19966232 19966322 19966232 ID=Msa0912110-mRNA-1:exon:4080;Parent=Msa0912110-mRNA-1
chr6_2 exon 19966886 19966941 19966886 ID=Msa0912110-mRNA-1:exon:4079;Parent=Msa0912110-mRNA-1
chr6_2 exon 19967737 19967772 19967737 ID=Msa0912110-mRNA-1:exon:4078;Parent=Msa0912110-mRNA-1
chr6_2 exon 19968639 19968791 19968639 ID=Msa0912110-mRNA-1:exon:4077;Parent=Msa0912110-mRNA-1
chr6_2 exon 19968919 19969089 19968919 ID=Msa0912110-mRNA-1:exon:4076;Parent=Msa0912110-mRNA-1
chr6_2 exon 19969892 19969930 19969892 ID=Msa0912110-mRNA-1:exon:4075;Parent=Msa0912110-mRNA-1
chr6_2 exon 19970436 19970480 19970436 ID=Msa0912110-mRNA-1:exon:4074;Parent=Msa0912110-mRNA-1
chr6_2 exon 19971708 19971760 19971708 ID=Msa0912110-mRNA-1:exon:4073;Parent=Msa0912110-mRNA-1
chr6_2 exon 19971813 19972367 19971813 ID=Msa0912110-mRNA-1:exon:4072;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19971813 19972367 19971813 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19971708 19971760 19971708 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19970436 19970480 19970436 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19969892 19969930 19969892 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19968919 19969089 19968919 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19968639 19968791 19968639 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19967737 19967772 19967737 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 five_prime_UTR 19966936 19966941 19966936 ID=Msa0912110-mRNA-1:five_prime_utr;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19966886 19966935 19966886 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19966232 19966322 19966232 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19965624 19965732 19965624 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19965431 19965448 19965431 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19964843 19965035 19964843 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19964706 19964755 19964706 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19964243 19964248 19964243 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19964159 19964209 19964159 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19963942 19964099 19963942 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19963734 19963778 19963734 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19963288 19963392 19963288 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19963156 19963197 19963156 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19963107 19963112 19963107 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19962851 19963021 19962851 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19962245 19962364 19962245 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 CDS 19962008 19962112 19962008 ID=Msa0912110-mRNA-1:cds;Parent=Msa0912110-mRNA-1
chr6_2 three_prime_UTR 19961699 19962007 19961699 ID=Msa0912110-mRNA-1:three_prime_utr;Parent=Msa0912110-mRNA-1
Gene Sequence

>Msa0912110

ATGCAGGAGATGGACTACAATAATGAAGCATGCAATGGTATCAAGTTCAGGAACTTATATGGTTCTATACAAGATGTGGTGGTTCCTTTGATGTACACAGAGTACACAACTCGCAAGGTCCTTGTCATGGAATGGATTGAGGTAGGAGTTTACTGCTCATTCAATCAACTTCTTGAGTGTGGGTTCTATCATGCAGACCCACACCCTGGAAATCTTCTTAGGACATCTGATGGCAAATTAGCTTATTTAGGTGAAAGATTGAGATTAAAAGATATATCTAAGGAGGTAAAGAAATCAATAAAATATACATACTTTTCTAAAACAATTCCCCCTACGTTTTGGCCAGATTTTGGCATGACAGGTGAATTCAAACAAGAATTGCGTGATGGATTCATTGAAGCTTGTTTACATCTTGTAAATCGTGATTTTGGTGCATTGGCTACGGACTTTGTCACTCTTGGGCTTCTTCCACCAACTGCAGAGAAAGAAGCTGTTACAAAGGCTTTGACAGGTGAGAGTATAAATTCAAGTTTAGGATACCTTCATACTTCTCACTTGTTATCCGAAGAATATTCTGTCTGTAGCCTTGCTGTACTGGAAGGAATTGCAATTGGCTTTAACCCAGACTACAAAGTCTTGGGTAGTACTTACCCATGGATTGCCAGAAAAGTGCTTACTGACAGCTCCCCTCAGCTTAGATCTTCTTTGGAGAATCTTCTTTATAAGGATGGTGTTTTCGATATAGACCGACTTGAGTCTTTGCTGACAGAGTCTCTCCGTGCCAAAACAGATAAGACCTTAGTAAAGATACCATCTGAAGGCGCAGATTCGAAAATGGTTATGAAGGAAATCCTTTCTTTTACACTAACAGAAAAGGGTGGATTTGTGAGGAAAATAATTGTTCAAGAATTTGCCAAGTTTAACGGTTTAGATGCACTTGGGCTTGCTTCCTTGGAAACAGCTGCTGCAAGAGTTCCTTTCAGTAATTTCTTCTTTTCACCTTTAATGACCGAAGAAGATATAGTCAATTTAAGGACCTTCCAACGCCTTATGCTATTGCTATCAGGGGCCAGAAGAAAAGAAGACTTCAATATTGGAGAGACAAAGGCTAGTCCCGACCAGAATCAAATACTGTACTCGGAGGAGCTGTCGCTAGTTTTAAATCAATTTGACTCCATTCAAGACATTCTTCCTGTTCTTTCCGTCATTCCTGAGCTCCCACCGGAATCCCAGCAGCAATTATTTCAATTGCCAGCTAACTTGGTTCAACAGTTAATATCCCGCGCTGCTGCGAGAACTATCAAAAGGGTGTTTTTGTGA
Protein sequence

>Msa0912110

MQEMDYNNEACNGIKFRNLYGSIQDVVVPLMYTEYTTRKVLVMEWIEVGVYCSFNQLLECGFYHADPHPGNLLRTSDGKLAYLGERLRLKDISKEVKKSIKYTYFSKTIPPTFWPDFGMTGEFKQELRDGFIEACLHLVNRDFGALATDFVTLGLLPPTAEKEAVTKALTGESINSSLGYLHTSHLLSEEYSVCSLAVLEGIAIGFNPDYKVLGSTYPWIARKVLTDSSPQLRSSLENLLYKDGVFDIDRLESLLTESLRAKTDKTLVKIPSEGADSKMVMKEILSFTLTEKGGFVRKIIVQEFAKFNGLDALGLASLETAAARVPFSNFFFSPLMTEEDIVNLRTFQRLMLLLSGARRKEDFNIGETKASPDQNQILYSEELSLVLNQFDSIQDILPVLSVIPELPPESQQQLFQLPANLVQQLISRAAARTIKRVFL*