AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1224820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224820 MtrunA17_Chr8g0380531 95.870 460 19 0 1 460 1 460 0.0 896
Msa1224820 MtrunA17_Chr6g0464841 48.802 459 229 3 2 459 3 456 1.82e-160 461
Msa1224820 MtrunA17_Chr6g0464881 48.578 457 229 3 2 457 3 454 2.78e-159 458
Msa1224820 MtrunA17_Chr6g0464871 48.366 459 231 3 2 459 15 468 8.28e-157 452
Msa1224820 MtrunA17_Chr6g0464861 48.253 458 230 3 3 459 4 455 1.65e-155 449
Msa1224820 MtrunA17_Chr5g0414331 46.272 456 236 3 6 460 9 456 2.03e-151 439
Msa1224820 MtrunA17_Chr6g0464921 47.277 459 236 4 1 457 1 455 7.90e-150 434
Msa1224820 MtrunA17_Chr5g0414321 45.770 461 235 5 1 457 2 451 3.54e-148 430
Msa1224820 MtrunA17_Chr7g0250001 45.796 452 237 3 7 457 3 447 1.48e-147 429
Msa1224820 MtrunA17_Chr7g0249981 46.358 453 235 3 6 457 21 466 7.53e-147 428
Msa1224820 MtrunA17_Chr7g0249931 44.737 456 240 7 6 457 36 483 8.08e-133 392
Msa1224820 MtrunA17_Chr8g0377921 40.987 466 247 15 10 455 4 461 6.66e-105 320
Msa1224820 MtrunA17_Chr3g0121991 38.947 475 255 13 10 457 79 545 7.40e-101 312
Msa1224820 MtrunA17_Chr3g0098111 37.395 476 263 12 7 458 6 470 1.26e-99 306
Msa1224820 MtrunA17_Chr1g0207981 36.975 476 258 9 9 457 12 472 1.14e-98 304
Msa1224820 MtrunA17_Chr4g0053501 36.461 469 272 9 5 457 6 464 3.19e-98 303
Msa1224820 MtrunA17_Chr8g0377941 38.559 472 249 13 10 457 7 461 2.35e-95 295
Msa1224820 MtrunA17_Chr1g0207861 36.632 475 268 11 7 458 5 469 1.49e-94 294
Msa1224820 MtrunA17_Chr3g0122001 37.924 472 264 11 10 457 486 952 4.19e-93 301
Msa1224820 MtrunA17_Chr3g0122001 38.055 473 263 13 10 457 6 473 2.98e-92 299
Msa1224820 MtrunA17_Chr4g0053321 35.622 466 274 9 8 457 24 479 2.58e-88 278
Msa1224820 MtrunA17_Chr1g0207971 34.194 465 280 9 7 459 5 455 9.63e-88 275
Msa1224820 MtrunA17_Chr1g0161351 35.565 478 283 10 1 459 28 499 2.86e-87 275
Msa1224820 MtrunA17_Chr5g0393591 33.191 470 245 11 10 459 17 437 5.13e-85 268
Msa1224820 MtrunA17_Chr8g0365811 34.310 478 285 11 3 458 488 958 9.76e-84 277
Msa1224820 MtrunA17_Chr8g0365811 35.010 477 279 12 7 458 6 476 2.47e-81 270
Msa1224820 MtrunA17_Chr7g0250021 42.138 318 178 4 6 321 8 321 3.46e-83 259
Msa1224820 MtrunA17_Chr1g0207951 33.333 474 285 8 3 459 113 572 4.83e-83 277
Msa1224820 MtrunA17_Chr1g0207951 34.591 477 283 11 2 459 644 1110 2.18e-82 275
Msa1224820 MtrunA17_Chr5g0401721 34.526 475 274 15 9 457 7 470 5.02e-83 264
Msa1224820 MtrunA17_Chr1g0207831 32.484 471 286 12 9 459 7 465 1.94e-80 257
Msa1224820 MtrunA17_Chr1g0207931 32.704 477 237 12 4 459 86 499 3.49e-78 252
Msa1224820 MtrunA17_Chr7g0249961 48.117 239 120 2 220 457 24 259 1.20e-74 235
Msa1224820 MtrunA17_Chr3g0092641 34.375 480 270 16 10 457 12 478 7.34e-74 240
Msa1224820 MtrunA17_Chr5g0426431 33.191 467 269 14 10 445 12 466 2.77e-71 233
Msa1224820 MtrunA17_Chr6g0454341 31.656 477 288 15 10 457 10 477 5.22e-68 224
Msa1224820 MtrunA17_Chr2g0278711 31.950 482 278 15 10 457 11 476 1.51e-67 223
Msa1224820 MtrunA17_Chr3g0078841 31.601 481 283 18 10 457 10 477 9.69e-66 219
Msa1224820 MtrunA17_Chr4g0050341 32.720 489 279 13 7 458 16 491 2.92e-65 218
Msa1224820 MtrunA17_Chr5g0412111 32.627 472 285 15 10 460 5 464 4.14e-65 216
Msa1224820 MtrunA17_Chr3g0112761 33.475 472 266 20 4 454 2 446 6.96e-65 216
Msa1224820 MtrunA17_Chr6g0454191 30.754 491 295 15 1 457 1 480 1.36e-64 216
Msa1224820 MtrunA17_Chr7g0218791 30.851 470 277 11 10 459 5 446 1.65e-64 214
Msa1224820 MtrunA17_Chr5g0412131 33.881 487 278 19 1 460 3 472 6.84e-64 214
Msa1224820 MtrunA17_Chr7g0217881 32.473 465 284 14 10 457 10 461 7.92e-64 213
Msa1224820 MtrunA17_Chr3g0118711 29.854 479 294 14 10 457 13 480 1.42e-63 213
Msa1224820 MtrunA17_Chr8g0336331 30.722 485 290 16 4 457 7 476 2.38e-63 212
Msa1224820 MtrunA17_Chr8g0359821 30.042 476 297 12 10 457 10 477 5.61e-63 211
Msa1224820 MtrunA17_Chr3g0118671 29.072 485 296 14 9 459 5 475 1.06e-61 208
Msa1224820 MtrunA17_Chr5g0412101 32.990 485 284 17 2 460 4 473 1.07e-61 208
Msa1224820 MtrunA17_Chr6g0454301 30.398 477 294 13 10 457 263 730 1.11e-61 213
Msa1224820 MtrunA17_Chr6g0454301 35.922 206 122 4 255 456 29 228 1.39e-35 140
Msa1224820 MtrunA17_Chr6g0454331 29.508 488 294 14 7 457 4 478 2.01e-61 207
Msa1224820 MtrunA17_Chr3g0106231 32.059 471 266 15 10 460 18 454 4.35e-61 206
Msa1224820 MtrunA17_Chr5g0431441 30.769 468 284 14 10 457 18 465 7.07e-61 206
Msa1224820 MtrunA17_Chr6g0454401 30.061 489 283 17 10 457 10 480 1.20e-59 202
Msa1224820 MtrunA17_Chr3g0118691 29.167 480 296 14 10 457 15 482 1.59e-59 202
Msa1224820 MtrunA17_Chr3g0118771 28.660 485 300 15 6 457 17 488 3.74e-59 201
Msa1224820 MtrunA17_Chr6g0454321 30.323 465 282 13 10 443 10 463 4.39e-59 205
Msa1224820 MtrunA17_Chr3g0118701 28.898 481 296 15 10 457 15 482 1.08e-58 200
Msa1224820 MtrunA17_Chr6g0454141 29.796 490 282 16 10 457 10 479 1.44e-58 200
Msa1224820 MtrunA17_Chr6g0454151 30.769 494 285 19 1 457 4 477 1.87e-58 199
Msa1224820 MtrunA17_Chr7g0218831 30.323 465 272 13 10 455 6 437 4.57e-58 197
Msa1224820 MtrunA17_Chr6g0453961 30.165 484 289 16 10 457 19 489 6.80e-58 198
Msa1224820 MtrunA17_Chr3g0112771 31.579 475 283 16 1 457 1 451 1.23e-57 197
Msa1224820 MtrunA17_Chr6g0452771 30.123 488 283 13 10 457 10 479 2.47e-57 196
Msa1224820 MtrunA17_Chr7g0218811 28.947 456 291 8 10 455 15 447 4.43e-57 195
Msa1224820 MtrunA17_Chr6g0454361 29.124 491 284 15 10 457 11 480 5.93e-57 196
Msa1224820 MtrunA17_Chr6g0454291 30.247 486 291 15 7 457 4 476 1.06e-56 195
Msa1224820 MtrunA17_Chr6g0454181 29.012 486 291 14 10 457 10 479 1.83e-56 194
Msa1224820 MtrunA17_Chr6g0454201 30.021 483 290 14 10 457 11 480 2.07e-56 194
Msa1224820 MtrunA17_Chr7g0243631 30.444 496 279 17 9 458 12 487 2.47e-56 194
Msa1224820 MtrunA17_Chr5g0423981 29.638 469 275 15 10 457 10 444 2.94e-56 193
Msa1224820 MtrunA17_Chr7g0243681 29.159 511 278 18 1 458 1 480 7.53e-56 193
Msa1224820 MtrunA17_Chr5g0431361 27.837 467 293 11 10 457 12 453 1.14e-55 191
Msa1224820 MtrunA17_Chr3g0118661 28.512 484 299 17 6 456 9 478 3.23e-55 191
Msa1224820 MtrunA17_Chr4g0032331 31.290 473 263 16 10 454 8 446 6.43e-55 189
Msa1224820 MtrunA17_Chr6g0454211 29.814 483 291 15 10 457 297 766 6.83e-55 195
Msa1224820 MtrunA17_Chr6g0454211 30.583 206 112 5 167 371 61 236 3.94e-18 87.4
Msa1224820 MtrunA17_Chr7g0218841 30.501 459 278 13 10 454 6 437 8.48e-55 189
Msa1224820 MtrunA17_Chr6g0454261 28.485 495 297 15 1 457 4 479 9.13e-55 190
Msa1224820 MtrunA17_Chr6g0454351 29.835 486 270 19 10 457 12 464 3.82e-54 187
Msa1224820 MtrunA17_Chr7g0218821 27.872 470 295 11 10 458 5 451 6.48e-54 186
Msa1224820 MtrunA17_Chr5g0431401 27.451 459 302 10 10 457 10 448 8.23e-54 186
Msa1224820 MtrunA17_Chr7g0243931 30.060 499 294 15 1 458 7 491 8.75e-54 187
Msa1224820 MtrunA17_Chr7g0232401 28.986 483 297 14 6 458 2 468 3.46e-53 185
Msa1224820 MtrunA17_Chr6g0454131 29.545 484 290 18 10 457 10 478 3.95e-53 185
Msa1224820 MtrunA17_Chr6g0453951 28.067 481 302 15 10 457 57 526 5.77e-53 186
Msa1224820 MtrunA17_Chr5g0448551 29.742 427 272 11 11 425 8 418 7.75e-53 184
Msa1224820 MtrunA17_Chr6g0454121 27.557 479 306 14 10 457 10 478 1.74e-52 184
Msa1224820 MtrunA17_Chr7g0275511 29.979 487 262 14 11 451 16 469 6.20e-52 182
Msa1224820 MtrunA17_Chr8g0366391 28.776 490 302 17 3 458 2 478 6.63e-52 182
Msa1224820 MtrunA17_Chr3g0118751 28.512 477 274 15 10 457 6 444 7.59e-52 181
Msa1224820 MtrunA17_Chr4g0044511 28.747 487 298 16 5 458 35 505 3.32e-51 181
Msa1224820 MtrunA17_Chr7g0243771 29.719 498 280 17 7 458 3 476 4.03e-51 180
Msa1224820 MtrunA17_Chr7g0243951 30.297 505 284 19 1 458 1 484 4.25e-51 180
Msa1224820 MtrunA17_Chr5g0432731 36.641 262 149 6 202 457 46 296 1.83e-50 173
Msa1224820 MtrunA17_Chr7g0265141 30.754 504 274 17 5 456 4 484 1.85e-50 178
Msa1224820 MtrunA17_Chr8g0347281 29.916 478 274 13 11 454 19 469 2.09e-50 178
Msa1224820 MtrunA17_Chr7g0243871 29.341 501 280 18 3 458 2 473 2.41e-50 178
Msa1224820 MtrunA17_Chr4g0060511 28.231 503 296 18 3 458 4 488 5.95e-50 177
Msa1224820 MtrunA17_Chr7g0243761 28.921 491 275 14 3 458 4 455 3.79e-49 174
Msa1224820 MtrunA17_Chr8g0373301 30.242 496 271 18 1 454 1 463 4.74e-49 174
Msa1224820 MtrunA17_Chr7g0243861 29.600 500 290 15 3 458 7 488 5.04e-49 174
Msa1224820 MtrunA17_Chr5g0419771 29.821 503 290 19 1 457 27 512 5.35e-49 175
Msa1224820 MtrunA17_Chr5g0431371 25.974 462 305 10 10 457 10 448 8.67e-49 173
Msa1224820 MtrunA17_Chr6g0449931 29.536 474 280 14 7 446 3 456 9.29e-49 173
Msa1224820 MtrunA17_Chr7g0243801 29.032 496 290 17 5 458 2 477 1.10e-48 174
Msa1224820 MtrunA17_Chr5g0401851 29.637 496 299 15 1 458 1 484 1.22e-48 173
Msa1224820 MtrunA17_Chr5g0431421 27.015 459 304 11 10 457 10 448 2.13e-48 172
Msa1224820 MtrunA17_Chr7g0232391 27.651 481 300 12 6 456 2 464 2.73e-48 172
Msa1224820 MtrunA17_Chr8g0361371 30.060 499 272 19 1 454 1 467 6.66e-48 171
Msa1224820 MtrunA17_Chr4g0044501 28.689 488 304 15 1 457 1 475 1.30e-47 171
Msa1224820 MtrunA17_Chr7g0232331 28.024 496 286 15 6 459 2 468 1.31e-47 170
Msa1224820 MtrunA17_Chr7g0232411 27.292 480 303 10 6 456 2 464 1.49e-47 170
Msa1224820 MtrunA17_Chr8g0334851 28.903 474 285 12 7 446 3 458 1.88e-47 170
Msa1224820 MtrunA17_Chr8g0347271 29.019 479 277 13 11 454 20 470 2.09e-47 170
Msa1224820 MtrunA17_Chr4g0014061 28.921 491 289 19 5 457 4 472 7.03e-47 168
Msa1224820 MtrunA17_Chr5g0426401 34.122 296 172 9 150 436 7 288 8.71e-47 164
Msa1224820 MtrunA17_Chr3g0106251 39.245 265 141 8 202 460 46 296 1.62e-46 163
Msa1224820 MtrunA17_Chr4g0066151 26.908 498 298 16 1 458 9 480 2.44e-46 167
Msa1224820 MtrunA17_Chr4g0066221 28.543 494 289 20 9 459 10 482 2.92e-46 167
Msa1224820 MtrunA17_Chr4g0044521 28.306 484 291 16 5 455 4 464 3.26e-46 166
Msa1224820 MtrunA17_Chr7g0265101 29.124 491 298 17 9 459 8 488 6.57e-46 166
Msa1224820 MtrunA17_Chr7g0232341 27.122 483 305 12 6 458 2 467 7.75e-46 165
Msa1224820 MtrunA17_Chr6g0462551 35.764 288 169 8 167 446 174 453 1.40e-45 165
Msa1224820 MtrunA17_Chr7g0243781 28.858 499 288 19 3 458 2 476 1.99e-45 164
Msa1224820 MtrunA17_Chr8g0336651 29.424 486 288 13 4 454 775 1240 2.10e-45 169
Msa1224820 MtrunA17_Chr8g0336651 27.743 483 288 14 8 454 4 461 9.27e-42 159
Msa1224820 MtrunA17_Chr8g0336651 34.074 270 141 7 192 454 532 771 5.87e-35 139
Msa1224820 MtrunA17_Chr8g0336741 28.601 486 284 14 6 454 9 468 3.75e-45 164
Msa1224820 MtrunA17_Chr8g0336691 29.039 489 284 15 4 454 913 1376 7.36e-45 168
Msa1224820 MtrunA17_Chr8g0336691 27.917 480 293 14 8 454 11 470 8.05e-43 162
Msa1224820 MtrunA17_Chr8g0336691 29.053 475 274 15 4 454 474 909 3.14e-42 160
Msa1224820 MtrunA17_Chr6g0463891 28.367 490 308 14 3 458 5 485 1.12e-44 163
Msa1224820 MtrunA17_Chr8g0339451 29.046 482 278 17 13 453 1 459 1.33e-44 162
Msa1224820 MtrunA17_Chr4g0066131 25.859 495 307 13 2 459 5 476 1.39e-44 162
Msa1224820 MtrunA17_Chr3g0118721 31.419 296 182 8 173 457 4 289 1.56e-44 157
Msa1224820 MtrunA17_Chr4g0072761 27.152 453 290 13 9 446 14 441 1.97e-44 161
Msa1224820 MtrunA17_Chr4g0072771 26.840 462 299 11 9 454 24 462 2.24e-44 161
Msa1224820 MtrunA17_Chr6g0462571 27.021 470 285 17 11 446 5 450 3.39e-44 161
Msa1224820 MtrunA17_Chr7g0265051 28.942 501 284 22 9 459 8 486 7.29e-44 160
Msa1224820 MtrunA17_Chr2g0294931 27.835 485 307 16 9 460 10 484 7.55e-44 160
Msa1224820 MtrunA17_Chr5g0429711 29.158 487 276 18 10 460 11 464 1.10e-43 159
Msa1224820 MtrunA17_Chr1g0153451 26.458 480 297 12 8 454 4 460 2.00e-43 159
Msa1224820 MtrunA17_Chr1g0179901 28.516 512 286 20 1 457 7 493 2.67e-43 159
Msa1224820 MtrunA17_Chr8g0339631 27.366 486 302 16 6 458 2 469 3.03e-43 158
Msa1224820 MtrunA17_Chr4g0066201 27.178 482 298 17 9 459 17 476 4.15e-43 158
Msa1224820 MtrunA17_Chr5g0429681 37.586 290 139 12 186 455 230 497 4.64e-43 158
Msa1224820 MtrunA17_Chr8g0335141 28.041 485 287 16 11 458 10 469 5.04e-43 158
Msa1224820 MtrunA17_Chr8g0339461 28.000 500 282 17 6 457 2 471 6.13e-43 157
Msa1224820 MtrunA17_Chr5g0416741 27.812 489 310 15 3 458 6 484 6.17e-43 158
Msa1224820 MtrunA17_Chr8g0334831 29.719 498 267 18 11 454 7 475 9.82e-43 157
Msa1224820 MtrunA17_Chr7g0265041 28.803 493 291 19 10 457 11 488 1.03e-42 157
Msa1224820 MtrunA17_Chr6g0486251 28.511 470 278 17 11 445 7 453 2.58e-42 155
Msa1224820 MtrunA17_Chr6g0486201 28.511 470 278 17 11 445 7 453 2.58e-42 155
Msa1224820 MtrunA17_Chr7g0235051 28.803 493 273 20 1 456 1 452 2.61e-42 155
Msa1224820 MtrunA17_Chr6g0454251 29.798 396 238 14 10 372 7 395 3.53e-42 154
Msa1224820 MtrunA17_Chr5g0419761 27.823 496 301 22 5 457 4 485 4.03e-42 155
Msa1224820 MtrunA17_Chr7g0275681 29.545 484 290 19 10 457 12 480 4.35e-42 155
Msa1224820 MtrunA17_Chr6g0454271 31.142 289 185 7 175 457 6 286 6.04e-42 150
Msa1224820 MtrunA17_Chr7g0243851 28.750 480 283 17 1 458 1 443 6.60e-42 154
Msa1224820 MtrunA17_Chr4g0066261 27.254 488 296 13 13 459 14 483 6.98e-42 155
Msa1224820 MtrunA17_Chr8g0336731 28.661 478 282 13 12 454 34 487 7.22e-42 155
Msa1224820 MtrunA17_Chr8g0335161 26.971 482 297 16 10 457 6 466 1.03e-41 154
Msa1224820 MtrunA17_Chr6g0462531 26.778 478 307 12 11 460 5 467 1.62e-41 154
Msa1224820 MtrunA17_Chr1g0159551 26.623 462 303 12 15 459 19 461 6.29e-41 152
Msa1224820 MtrunA17_Chr5g0440421 26.962 497 319 14 1 457 1 493 7.05e-41 152
Msa1224820 MtrunA17_Chr8g0374971 26.016 492 303 14 9 459 11 482 7.72e-41 152
Msa1224820 MtrunA17_Chr7g0232311 27.515 487 293 13 1 454 1 460 8.72e-41 151
Msa1224820 MtrunA17_Chr6g0463851 26.572 493 294 20 13 459 14 484 1.15e-40 152
Msa1224820 MtrunA17_Chr4g0066281 26.559 497 293 18 1 459 6 468 2.82e-40 150
Msa1224820 MtrunA17_Chr5g0428081 27.368 475 310 14 13 459 14 481 4.83e-40 150
Msa1224820 MtrunA17_Chr6g0459311 27.331 472 281 17 11 445 14 460 9.78e-40 149
Msa1224820 MtrunA17_Chr6g0454221 36.408 206 121 4 255 456 30 229 9.78e-40 145
Msa1224820 MtrunA17_Chr6g0463861 27.066 484 294 16 13 459 14 475 1.30e-39 149
Msa1224820 MtrunA17_Chr3g0079731 26.453 499 302 13 1 455 1 478 1.50e-39 149
Msa1224820 MtrunA17_Chr2g0294921 26.694 487 308 17 9 459 159 632 1.97e-39 150
Msa1224820 MtrunA17_Chr5g0416821 26.585 489 305 16 3 458 7 474 5.66e-39 147
Msa1224820 MtrunA17_Chr6g0462521 31.861 317 176 9 146 446 147 439 5.68e-39 146
Msa1224820 MtrunA17_Chr8g0374901 27.530 494 283 18 13 459 15 480 6.91e-39 147
Msa1224820 MtrunA17_Chr1g0173121 26.582 474 299 15 11 459 15 464 1.01e-38 146
Msa1224820 MtrunA17_Chr5g0431431 31.235 413 206 14 1 409 1 339 1.58e-38 143
Msa1224820 MtrunA17_Chr8g0374931 25.207 484 309 16 14 459 15 483 2.98e-38 145
Msa1224820 MtrunA17_Chr5g0410941 26.337 486 307 15 9 459 22 491 3.72e-38 145
Msa1224820 MtrunA17_Chr6g0462541 30.530 321 185 10 145 446 151 452 4.13e-38 144
Msa1224820 MtrunA17_Chr8g0374941 26.829 492 293 18 13 460 952 1420 4.39e-38 148
Msa1224820 MtrunA17_Chr8g0374941 26.134 463 291 13 13 439 479 926 6.26e-32 129
Msa1224820 MtrunA17_Chr8g0374941 26.059 472 282 19 13 440 14 462 1.36e-31 129
Msa1224820 MtrunA17_Chr4g0011051 27.565 497 295 17 9 457 8 487 6.53e-38 144
Msa1224820 MtrunA17_Chr4g0044481 28.702 439 250 14 10 423 27 427 6.61e-38 143
Msa1224820 MtrunA17_Chr8g0350881 26.543 486 310 15 9 460 11 483 9.73e-38 144
Msa1224820 MtrunA17_Chr8g0382021 24.742 485 292 15 15 459 39 490 1.62e-37 143
Msa1224820 MtrunA17_Chr8g0334861 30.133 375 211 10 113 456 108 462 1.83e-37 142
Msa1224820 MtrunA17_Chr5g0420801 26.639 488 294 15 6 459 3 460 2.03e-37 142
Msa1224820 MtrunA17_Chr6g0454171 30.675 326 179 13 142 457 21 309 4.74e-37 138
Msa1224820 MtrunA17_Chr7g0265151 27.328 494 308 18 3 457 2 483 5.58e-37 141
Msa1224820 MtrunA17_Chr5g0442561 26.069 491 293 14 10 455 5 470 7.43e-37 141
Msa1224820 MtrunA17_Chr7g0243711 33.840 263 153 6 211 458 61 317 7.96e-37 137
Msa1224820 MtrunA17_Chr8g0361411 25.482 467 308 15 10 457 8 453 8.64e-37 140
Msa1224820 MtrunA17_Chr4g0042931 27.198 489 287 20 9 458 6 464 1.60e-36 140
Msa1224820 MtrunA17_Chr4g0066171 24.580 476 317 13 9 459 20 478 1.02e-35 138
Msa1224820 MtrunA17_Chr8g0339601 32.075 318 169 9 165 453 27 326 1.29e-35 134
Msa1224820 MtrunA17_Chr8g0355221 25.451 499 298 18 9 458 14 487 2.56e-35 137
Msa1224820 MtrunA17_Chr7g0265111 27.655 499 300 16 7 460 36 518 5.88e-35 136
Msa1224820 MtrunA17_Chr5g0442601 25.641 507 289 17 5 455 399 873 1.69e-34 137
Msa1224820 MtrunA17_Chr5g0442601 25.329 304 153 8 111 383 62 322 4.78e-16 80.9
Msa1224820 MtrunA17_Chr8g0370941 24.851 503 289 15 10 451 8 482 2.13e-34 134
Msa1224820 MtrunA17_Chr4g0042891 32.484 314 171 13 167 458 172 466 2.64e-34 134
Msa1224820 MtrunA17_Chr5g0442521 24.797 492 299 14 11 455 6 473 3.12e-34 134
Msa1224820 MtrunA17_Chr7g0241781 26.998 463 283 16 3 451 2 423 3.93e-34 132
Msa1224820 MtrunA17_Chr1g0165701 26.423 492 299 19 9 458 14 484 8.69e-34 132
Msa1224820 MtrunA17_Chr2g0329111 27.291 502 303 19 1 460 1 482 1.07e-33 132
Msa1224820 MtrunA17_Chr5g0442541 26.465 495 279 16 10 455 5 463 1.07e-33 132
Msa1224820 MtrunA17_Chr7g0218311 23.984 492 312 15 9 459 15 485 1.34e-33 132
Msa1224820 MtrunA17_Chr7g0241801 26.608 451 256 18 3 429 2 401 2.94e-33 130
Msa1224820 MtrunA17_Chr2g0307961 25.667 487 306 16 3 457 6 468 3.74e-33 130
Msa1224820 MtrunA17_Chr5g0442491 25.451 499 286 16 11 455 6 472 4.60e-33 130
Msa1224820 MtrunA17_Chr8g0369341 24.798 496 303 15 6 459 3 470 4.72e-33 130
Msa1224820 MtrunA17_Chr5g0403641 31.646 316 173 8 164 450 194 495 5.83e-33 130
Msa1224820 MtrunA17_Chr5g0448521 25.410 488 279 16 9 446 4 456 1.55e-32 129
Msa1224820 MtrunA17_Chr1g0207881 41.844 141 80 1 321 459 246 386 2.84e-32 127
Msa1224820 MtrunA17_Chr1g0207881 29.032 279 161 8 9 276 7 259 3.92e-27 112
Msa1224820 MtrunA17_Chr8g0355011 26.287 369 199 10 110 457 45 361 3.58e-32 126
Msa1224820 MtrunA17_Chr1g0153461 33.810 210 124 3 264 458 4 213 6.42e-32 121
Msa1224820 MtrunA17_Chr8g0336251 27.902 491 282 18 8 458 5 463 7.63e-32 127
Msa1224820 MtrunA17_Chr8g0336321 28.138 494 277 19 8 458 5 463 1.31e-31 126
Msa1224820 MtrunA17_Chr5g0442581 24.847 491 303 15 10 455 5 474 1.44e-31 127
Msa1224820 MtrunA17_Chr8g0339441 35.096 208 117 4 264 453 218 425 4.15e-31 124
Msa1224820 MtrunA17_Chr6g0454371 36.416 173 100 4 289 457 4 170 9.32e-31 117
Msa1224820 MtrunA17_Chr2g0294941 27.374 358 218 13 113 440 17 362 1.81e-30 121
Msa1224820 MtrunA17_Chr5g0409591 25.466 483 272 16 8 430 2 456 2.31e-30 122
Msa1224820 MtrunA17_Chr7g0243911 34.146 205 124 4 257 453 15 216 3.50e-30 117
Msa1224820 MtrunA17_Chr7g0243611 37.736 212 118 7 209 409 80 288 1.59e-29 117
Msa1224820 MtrunA17_Chr7g0231631 32.384 281 151 11 196 458 1 260 1.14e-28 114
Msa1224820 MtrunA17_Chr2g0302961 24.395 496 302 17 7 459 2 467 1.68e-28 117
Msa1224820 MtrunA17_Chr2g0302991 24.898 490 304 17 7 459 2 464 6.75e-28 115
Msa1224820 MtrunA17_Chr5g0442511 25.257 487 285 17 10 458 49 494 8.63e-28 115
Msa1224820 MtrunA17_Chr6g0482061 24.138 493 307 18 10 458 11 480 2.40e-27 114
Msa1224820 MtrunA17_Chr3g0079711 34.783 184 102 4 290 455 3 186 3.56e-27 107
Msa1224820 MtrunA17_Chr8g0367221 26.008 496 300 20 1 459 1281 1746 3.98e-27 115
Msa1224820 MtrunA17_Chr8g0367221 24.262 474 285 20 5 437 7 447 8.66e-26 111
Msa1224820 MtrunA17_Chr8g0367221 26.496 468 283 20 5 437 793 1234 4.96e-25 108
Msa1224820 MtrunA17_Chr7g0243811 27.981 411 234 18 22 399 1 382 8.81e-27 111
Msa1224820 MtrunA17_Chr4g0029131 24.477 478 279 17 2 438 4 440 1.76e-26 112
Msa1224820 MtrunA17_Chr8g0336261 39.850 133 70 4 289 417 4 130 2.98e-26 103
Msa1224820 MtrunA17_Chr7g0232351 26.238 404 233 15 6 371 2 378 7.88e-26 108
Msa1224820 MtrunA17_Chr4g0040711 25.499 451 301 15 6 437 4 438 2.35e-25 108
Msa1224820 MtrunA17_Chr5g0427571 32.707 266 163 8 202 458 39 297 4.68e-25 104
Msa1224820 MtrunA17_Chr2g0278721 22.944 462 296 13 2 431 7 440 1.30e-24 107
Msa1224820 MtrunA17_Chr2g0278721 23.656 465 300 15 1 431 508 951 2.65e-23 103
Msa1224820 MtrunA17_Chr6g0466831 24.153 472 325 14 2 459 10 462 1.99e-24 105
Msa1224820 MtrunA17_Chr2g0302851 22.889 450 304 12 2 430 8 435 6.83e-24 103
Msa1224820 MtrunA17_Chr4g0069611 23.465 456 280 14 9 430 14 434 1.54e-23 102
Msa1224820 MtrunA17_Chr8g0337381 38.211 123 72 2 332 453 2 121 2.08e-23 95.5
Msa1224820 MtrunA17_Chr6g0454231 28.629 248 131 7 202 446 2 206 3.17e-23 102
Msa1224820 MtrunA17_Chr6g0454231 25.217 230 147 6 10 216 250 477 6.26e-11 64.3
Msa1224820 MtrunA17_Chr6g0466841 24.379 443 306 13 2 430 10 437 8.60e-23 100
Msa1224820 MtrunA17_Chr4g0040691 25.054 459 293 15 6 437 4 438 1.34e-22 100
Msa1224820 MtrunA17_Chr1g0207911 25.926 243 166 4 9 240 7 246 1.52e-22 96.7
Msa1224820 MtrunA17_Chr2g0278741 22.944 462 294 15 3 431 90 522 9.53e-22 98.2
Msa1224820 MtrunA17_Chr1g0196851 24.094 469 281 18 9 438 48 480 1.15e-21 97.4
Msa1224820 MtrunA17_Chr2g0283041 23.395 483 298 17 10 457 7 452 1.64e-21 96.7
Msa1224820 MtrunA17_Chr2g0319801 25.764 458 289 17 7 437 5 438 2.29e-21 96.3
Msa1224820 MtrunA17_Chr6g0464091 23.230 452 295 14 9 431 17 445 7.14e-21 95.1
Msa1224820 MtrunA17_Chr8g0377911 37.681 138 77 4 11 144 8 140 7.82e-20 86.3
Msa1224820 MtrunA17_Chr2g0319761 24.217 479 288 19 9 448 7 449 7.99e-20 91.7
Msa1224820 MtrunA17_Chr8g0357361 39.259 135 79 3 264 396 118 251 9.87e-20 89.0
Msa1224820 MtrunA17_Chr7g0249971 45.238 84 42 1 6 89 7 86 1.22e-19 84.7
Msa1224820 MtrunA17_Chr2g0319731 26.022 465 279 19 7 437 22 455 3.91e-19 89.7
Msa1224820 MtrunA17_Chr4g0029151 31.016 187 112 6 266 438 265 448 4.10e-19 89.7
Msa1224820 MtrunA17_Chr4g0066141 31.210 157 97 3 313 458 196 352 1.30e-18 87.0
Msa1224820 MtrunA17_Chr3g0092031 30.539 167 113 3 266 430 6 171 3.96e-18 82.8
Msa1224820 MtrunA17_Chr2g0319791 31.797 217 126 8 229 437 236 438 7.97e-18 85.5
Msa1224820 MtrunA17_Chr4g0039881 26.957 230 157 6 205 430 189 411 2.64e-17 84.0
Msa1224820 MtrunA17_Chr2g0319751 24.153 472 279 18 9 439 484 917 3.21e-17 84.7
Msa1224820 MtrunA17_Chr6g0453981 32.620 187 112 7 150 329 48 227 6.10e-17 80.1
Msa1224820 MtrunA17_Chr6g0453941 25.000 308 161 11 10 309 11 256 5.87e-15 75.1
Msa1224820 MtrunA17_Chr5g0426411 30.061 163 102 6 4 157 6 165 1.84e-14 71.2
Msa1224820 MtrunA17_Chr5g0442501 25.806 310 202 10 11 307 6 300 1.47e-13 71.2
Msa1224820 MtrunA17_Chr8g0336271 26.721 247 146 11 4 224 7 244 2.25e-13 70.5
Msa1224820 MtrunA17_Chr7g0243731 42.308 78 44 1 325 401 1 78 3.01e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1224820 AT2G43840.2 52.643 454 197 7 10 458 7 447 1.33e-170 487
Msa1224820 AT2G43840.1 52.423 454 198 7 10 458 7 447 1.37e-169 484
Msa1224820 AT2G43820.1 50.972 463 206 8 1 458 1 447 1.18e-165 474
Msa1224820 AT2G31790.1 44.124 451 241 4 10 454 8 453 1.61e-135 398
Msa1224820 AT1G05675.1 44.346 451 240 5 10 455 6 450 8.04e-133 391
Msa1224820 AT1G05680.1 44.105 458 231 7 10 455 6 450 3.76e-132 389
Msa1224820 AT2G31750.2 43.871 465 242 9 5 460 3 457 9.97e-123 367
Msa1224820 AT2G31750.1 43.750 464 242 9 5 459 3 456 1.63e-122 365
Msa1224820 AT1G24100.1 40.347 461 253 10 10 459 11 460 9.29e-111 335
Msa1224820 AT4G15480.1 34.188 468 282 8 9 457 18 478 1.91e-104 320
Msa1224820 AT3G21560.1 36.501 463 277 8 10 457 12 472 3.56e-103 317
Msa1224820 AT4G15490.1 35.714 476 269 14 6 457 4 466 1.12e-100 310
Msa1224820 AT4G15550.1 35.992 489 242 14 10 456 13 472 6.06e-94 292
Msa1224820 AT4G15500.1 34.335 466 290 9 3 457 2 462 3.56e-93 290
Msa1224820 AT1G05560.1 35.470 468 261 10 10 457 5 451 9.16e-93 289
Msa1224820 AT1G05560.2 35.158 475 267 10 3 457 48 501 1.46e-92 290
Msa1224820 AT1G05530.1 36.364 462 268 9 10 457 5 454 3.95e-91 284
Msa1224820 AT4G14090.1 37.310 461 256 12 10 456 13 454 1.24e-89 280
Msa1224820 AT2G23260.1 33.548 465 289 10 1 457 1 453 5.74e-85 268
Msa1224820 AT2G23250.1 34.071 452 274 10 13 457 1 435 1.52e-82 261
Msa1224820 AT1G22360.1 32.851 484 281 15 6 457 6 477 9.11e-78 250
Msa1224820 AT1G22400.1 32.919 483 283 16 6 457 9 481 3.67e-76 246
Msa1224820 AT1G22380.1 32.917 480 278 17 10 457 13 480 2.37e-71 234
Msa1224820 AT1G22360.2 31.875 480 279 14 6 457 6 465 3.51e-70 230
Msa1224820 AT1G22340.1 31.799 478 287 12 10 457 13 481 4.40e-69 228
Msa1224820 AT1G78270.1 31.098 492 292 14 1 457 1 480 1.55e-64 216
Msa1224820 AT2G36970.1 28.926 484 305 12 1 458 1 471 4.83e-64 215
Msa1224820 AT1G22370.2 33.124 477 276 18 10 457 13 475 6.33e-64 214
Msa1224820 AT5G59590.1 30.126 478 284 13 1 457 1 449 3.44e-62 209
Msa1224820 AT5G38010.1 30.169 474 293 13 1 457 1 453 2.28e-59 201
Msa1224820 AT3G02100.1 29.158 487 280 14 4 458 7 460 6.06e-59 201
Msa1224820 AT3G46670.1 31.950 482 268 15 3 458 2 449 8.98e-59 200
Msa1224820 AT5G59580.1 30.704 469 276 14 10 458 9 448 1.06e-58 200
Msa1224820 AT2G30140.2 31.489 470 268 18 10 457 13 450 2.27e-58 199
Msa1224820 AT3G46660.1 30.252 476 286 12 3 458 7 456 4.53e-58 198
Msa1224820 AT2G30140.1 31.210 471 269 18 10 457 13 451 7.52e-58 197
Msa1224820 AT2G15480.1 27.992 493 306 14 1 457 1 480 9.63e-58 198
Msa1224820 AT2G28080.1 27.922 462 303 10 14 457 22 471 2.49e-57 197
Msa1224820 AT2G15490.3 28.099 484 301 14 9 457 6 477 1.54e-56 195
Msa1224820 AT2G15490.1 28.131 487 300 14 9 457 6 480 1.53e-55 192
Msa1224820 AT2G15480.2 27.634 503 305 16 1 457 1 490 5.42e-55 191
Msa1224820 AT2G30150.2 27.505 469 294 12 10 459 13 454 6.05e-55 190
Msa1224820 AT5G38040.1 31.646 474 282 14 1 457 1 449 1.14e-53 186
Msa1224820 AT2G30150.1 27.312 465 292 12 14 459 1 438 2.45e-53 185
Msa1224820 AT5G05870.1 29.412 476 289 13 5 457 3 454 9.17e-53 184
Msa1224820 AT5G14860.1 29.116 498 287 16 6 460 4 478 3.08e-52 183
Msa1224820 AT5G17050.1 28.238 471 289 12 10 457 12 456 4.39e-52 182
Msa1224820 AT5G05880.1 29.873 472 282 16 5 455 3 446 8.17e-52 181
Msa1224820 AT3G46650.1 28.821 458 291 14 1 453 1 428 4.72e-51 179
Msa1224820 AT1G10400.1 27.158 475 302 13 9 457 6 462 3.40e-50 177
Msa1224820 AT4G34138.1 30.612 490 282 19 7 457 8 478 1.71e-49 176
Msa1224820 AT1G01420.1 30.021 473 282 15 10 452 8 461 2.12e-49 176
Msa1224820 AT1G01420.2 30.021 473 282 15 10 452 11 464 2.16e-49 176
Msa1224820 AT3G46680.1 28.692 474 289 17 1 455 4 447 3.09e-49 174
Msa1224820 AT3G46700.1 28.723 470 295 12 3 458 2 445 3.32e-49 174
Msa1224820 AT5G05860.1 28.719 484 278 15 3 457 2 447 6.18e-49 174
Msa1224820 AT2G16890.2 29.106 481 292 14 10 460 9 470 1.20e-48 174
Msa1224820 AT5G17040.1 26.652 454 312 7 10 459 5 441 1.60e-48 172
Msa1224820 AT3G46690.1 28.000 475 295 14 3 457 2 449 2.54e-48 172
Msa1224820 AT4G34131.1 29.630 486 290 18 9 457 9 479 3.05e-48 172
Msa1224820 AT3G11340.1 27.195 467 301 14 1 454 1 441 1.22e-47 170
Msa1224820 AT2G26480.1 28.017 464 292 13 10 457 8 445 1.33e-47 170
Msa1224820 AT4G01070.1 26.804 485 297 13 1 451 1 461 3.55e-46 167
Msa1224820 AT5G05900.1 29.053 475 281 16 5 455 3 445 4.32e-46 166
Msa1224820 AT1G30530.1 28.166 458 287 12 16 457 19 450 4.63e-46 166
Msa1224820 AT2G36800.1 28.974 497 299 18 2 457 4 487 4.36e-45 164
Msa1224820 AT1G22370.1 34.983 303 174 9 167 457 14 305 1.18e-44 158
Msa1224820 AT2G36750.1 28.776 490 293 19 9 457 9 483 1.38e-44 163
Msa1224820 AT3G46720.1 28.842 475 284 15 3 458 2 441 3.25e-44 161
Msa1224820 AT5G17030.1 25.216 464 311 11 10 457 12 455 1.17e-43 159
Msa1224820 AT2G36770.1 28.138 494 292 17 9 457 13 488 2.63e-43 159
Msa1224820 AT3G16520.3 31.339 351 214 11 111 446 113 451 2.88e-43 159
Msa1224820 AT3G16520.2 31.871 342 206 11 111 437 113 442 3.63e-43 158
Msa1224820 AT3G16520.1 31.871 342 206 11 111 437 113 442 3.63e-43 158
Msa1224820 AT3G55700.1 28.361 476 296 14 1 457 1 450 6.82e-43 157
Msa1224820 AT4G34135.1 27.743 483 304 13 9 457 10 481 1.29e-42 157
Msa1224820 AT3G50740.1 28.367 490 294 15 5 456 2 472 2.91e-42 156
Msa1224820 AT3G55710.1 30.228 483 282 22 1 457 1 454 5.04e-42 155
Msa1224820 AT5G05890.1 27.349 479 289 13 5 455 3 450 1.58e-41 154
Msa1224820 AT5G26310.1 28.279 488 287 20 10 459 7 469 1.82e-41 154
Msa1224820 AT3G22250.1 28.054 442 276 13 11 426 9 434 2.04e-41 154
Msa1224820 AT1G01390.1 27.883 477 298 14 5 452 3 462 3.22e-41 153
Msa1224820 AT1G01390.2 27.883 477 298 14 5 452 20 479 3.51e-41 154
Msa1224820 AT2G36760.1 26.471 476 309 11 9 450 13 481 4.14e-41 153
Msa1224820 AT3G21790.1 27.613 507 284 18 9 460 3 481 4.16e-41 153
Msa1224820 AT5G17040.2 30.479 292 189 4 169 459 61 339 5.10e-41 149
Msa1224820 AT2G29740.1 29.209 493 288 19 5 457 3 474 7.04e-41 152
Msa1224820 AT2G36790.1 29.774 487 293 18 9 457 12 487 7.09e-41 152
Msa1224820 AT2G16890.3 28.966 435 261 13 10 415 9 424 1.44e-40 150
Msa1224820 AT5G66690.1 28.016 489 287 17 10 459 7 469 1.56e-40 151
Msa1224820 AT1G73880.1 25.261 479 317 15 2 457 6 466 1.70e-40 151
Msa1224820 AT2G36780.1 27.755 490 301 17 8 457 12 488 3.86e-40 150
Msa1224820 AT5G03490.1 27.941 476 287 19 10 459 19 464 1.43e-39 149
Msa1224820 AT3G53160.1 29.006 493 289 22 9 457 7 482 2.00e-39 149
Msa1224820 AT3G53150.1 27.290 513 293 18 5 457 17 509 2.95e-39 149
Msa1224820 AT3G21800.1 26.316 494 297 15 11 459 6 477 9.17e-38 144
Msa1224820 AT4G15280.2 26.680 506 291 20 3 457 29 505 1.04e-37 144
Msa1224820 AT4G15280.1 27.000 500 285 20 9 457 3 473 1.79e-37 143
Msa1224820 AT1G07250.1 28.542 487 289 17 10 457 6 472 1.80e-37 143
Msa1224820 AT1G07260.1 28.247 485 298 16 7 457 3 471 2.57e-37 142
Msa1224820 AT3G21750.1 25.971 489 299 13 9 457 3 468 8.47e-37 141
Msa1224820 AT4G36770.1 26.205 477 276 13 9 441 3 447 3.44e-36 139
Msa1224820 AT3G21760.1 26.400 500 301 15 9 460 3 483 8.63e-36 138
Msa1224820 AT2G29730.1 26.050 476 310 14 8 457 3 462 1.41e-34 135
Msa1224820 AT4G15260.1 34.155 284 149 10 198 457 85 354 5.03e-34 131
Msa1224820 AT3G21780.1 27.105 487 296 19 9 457 3 468 1.25e-33 132
Msa1224820 AT4G27570.1 26.452 465 301 16 9 458 6 444 1.79e-33 131
Msa1224820 AT4G27560.1 25.957 470 297 16 9 458 6 444 7.67e-33 130
Msa1224820 AT2G18570.1 26.946 501 272 20 10 456 5 465 1.32e-32 129
Msa1224820 AT2G29710.1 27.673 477 295 18 11 457 6 462 2.66e-32 128
Msa1224820 AT2G18560.1 30.961 281 153 9 201 456 111 375 3.00e-32 127
Msa1224820 AT1G06000.1 26.483 472 275 18 10 457 10 433 3.58e-32 127
Msa1224820 AT5G49690.1 26.569 478 303 18 1 459 1 449 4.22e-32 127
Msa1224820 AT3G29630.1 24.625 467 309 18 7 458 3 441 1.55e-30 123
Msa1224820 AT5G54010.1 26.891 476 292 21 7 459 3 445 3.93e-30 122
Msa1224820 AT1G51210.1 27.517 447 276 20 4 431 14 431 4.35e-30 122
Msa1224820 AT1G07240.1 29.195 298 179 8 179 457 191 475 8.03e-30 121
Msa1224820 AT2G29750.1 26.931 505 283 22 5 457 3 473 9.56e-30 121
Msa1224820 AT5G12890.1 25.000 500 311 17 1 456 1 480 1.81e-29 120
Msa1224820 AT2G23210.1 30.403 273 168 9 10 274 10 268 2.47e-28 114
Msa1224820 AT5G53990.1 24.786 468 304 15 7 458 3 438 4.38e-28 116
Msa1224820 AT3G29630.2 26.134 463 281 19 7 458 3 415 1.32e-27 114
Msa1224820 AT5G37950.1 28.532 361 230 10 25 373 1 345 1.99e-27 112
Msa1224820 AT2G22590.1 26.144 459 281 17 6 431 11 444 2.22e-27 114
Msa1224820 AT5G37950.2 28.412 359 227 10 25 373 1 339 2.54e-27 112
Msa1224820 AT5G54060.1 26.195 481 301 21 5 457 8 462 3.59e-27 114
Msa1224820 AT5G65550.1 24.342 456 281 18 9 429 8 434 3.59e-27 114
Msa1224820 AT1G50580.1 23.810 462 309 14 6 451 2 436 4.41e-27 113
Msa1224820 AT1G64910.1 23.932 468 315 17 8 459 4 446 5.59e-27 113
Msa1224820 AT2G22930.1 22.678 463 320 13 8 459 4 439 6.94e-27 112
Msa1224820 AT1G64920.1 24.034 466 308 17 9 455 5 443 3.09e-25 108
Msa1224820 AT4G09500.2 22.629 464 319 14 9 460 5 440 2.41e-23 102
Msa1224820 AT4G01070.2 27.134 328 196 11 1 309 1 304 5.18e-21 94.4
Msa1224820 AT4G09500.1 22.560 461 298 15 9 460 5 415 1.25e-19 91.3
Msa1224820 AT4G34135.2 25.153 326 209 9 9 309 10 325 5.25e-19 88.2

Find 115 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAATGATATCTGCTTTA+TGG 0.101976 8_1:+89911807 None:intergenic
AATGAGTTCCTTCAAATTCT+TGG 0.176613 8_1:+89912132 None:intergenic
GAAATAGCATTAGGATTATT+AGG 0.226331 8_1:-89910844 Msa1224820:CDS
ACTAATGTTAATATGTATTA+TGG 0.235132 8_1:-89910337 Msa1224820:three_prime_UTR
CTTATGGGTAATCCCTAATA+TGG 0.251252 8_1:-89910806 Msa1224820:CDS
GAAGTGGTTCAAATTTCTTA+TGG 0.275041 8_1:-89910822 Msa1224820:CDS
GTTGGCCCAATTGTCAATAT+TGG 0.291942 8_1:+89911036 None:intergenic
TACTCCCTTGTCCAAGTAAA+AGG 0.292888 8_1:+89911005 None:intergenic
AATATTGGAGTCCTTGGATT+TGG 0.299741 8_1:-89910285 Msa1224820:three_prime_UTR
CAATAGGTGATGAGTCTAAT+TGG 0.307848 8_1:+89910950 None:intergenic
TCCTAGTAAGTCAAATTCTT+TGG 0.311601 8_1:+89912033 None:intergenic
GGAAGCCCTGGCATAGAAAT+TGG 0.312817 8_1:+89911923 None:intergenic
ACACTTGAAGCATTGTGTTT+AGG 0.320691 8_1:-89910643 Msa1224820:CDS
AATTTAGAGAACTGAATATA+TGG 0.325289 8_1:+89912471 None:intergenic
ATACATATTAACATTAGTTT+AGG 0.330674 8_1:+89910342 None:intergenic
AAATCATTGTCTTTGTCATT+TGG 0.332954 8_1:+89910982 None:intergenic
GTATTTGTTTCAATTAATAT+TGG 0.341588 8_1:-89910300 Msa1224820:three_prime_UTR
CTTGTGCTTGTATCAATAAT+AGG 0.352941 8_1:-89912442 Msa1224820:five_prime_UTR
TCAGCTATTTATGTATCATT+TGG 0.358377 8_1:-89910901 Msa1224820:CDS
TGATTGGAGATGCATGGTTT+TGG 0.361111 8_1:+89912270 None:intergenic
CTTCAAATTCTTGGAGCCTA+TGG 0.363594 8_1:+89912141 None:intergenic
TCAATTAATATTGGAGTCCT+TGG 0.374516 8_1:-89910291 Msa1224820:three_prime_UTR
AAGTGGTTCAAATTTCTTAT+GGG 0.377984 8_1:-89910821 Msa1224820:CDS
TCATATACTACACAATCTAT+AGG 0.379795 8_1:+89912085 None:intergenic
AAGAGATTGAGAGTTGCATT+AGG 0.380560 8_1:-89910501 Msa1224820:CDS
GTTCTATCTAACAAAGCTAT+TGG 0.386677 8_1:-89910697 Msa1224820:CDS
GAAATTGGCATTGAAGATAT+AGG 0.387888 8_1:+89911938 None:intergenic
GAAATGAGTTCAAGTGGAAA+AGG 0.388516 8_1:-89910751 Msa1224820:CDS
ATCAATAATAGGAAAGGAAA+TGG 0.391481 8_1:-89912431 Msa1224820:exon
GAAAAGGGTTGGTAGTGAAT+TGG 0.401038 8_1:-89910735 Msa1224820:CDS
TTTGAATTCAGCCAATCAAT+AGG 0.404156 8_1:+89910934 None:intergenic
TCCAAAACCCATTGAAGAAA+AGG 0.404165 8_1:+89912061 None:intergenic
CTATGTCCAATATTGACAAT+TGG 0.407942 8_1:-89911042 Msa1224820:CDS
TGAAAATTAATGCTAAGAAA+TGG 0.408124 8_1:-89910447 Msa1224820:CDS
TAGACTCATCACCTATTGAT+TGG 0.418457 8_1:-89910945 Msa1224820:CDS
TGCTAAGAAATGGAGAGAAT+TGG 0.423410 8_1:-89910437 Msa1224820:CDS
AGAGTTAAGGTAAATGAGAA+TGG 0.425016 8_1:-89910538 Msa1224820:CDS
ACATAAATAGCTGACCCTTC+AGG 0.426164 8_1:+89910910 None:intergenic
CAAATGAAGGAAATAGCATT+AGG 0.428452 8_1:-89910853 Msa1224820:CDS
CATATACTACACAATCTATA+GGG 0.430640 8_1:+89912086 None:intergenic
AGCAAACGTTTGAGCACAAA+AGG 0.432736 8_1:-89912328 Msa1224820:CDS
TATGTCCAATATTGACAATT+GGG 0.442133 8_1:-89911041 Msa1224820:CDS
CCTTCCTTTGTTTATGACCC+TGG 0.449807 8_1:-89911878 Msa1224820:CDS
CGTTTGCTGAATTGAAGCAT+TGG 0.459472 8_1:+89912343 None:intergenic
AGAACTGAATATATGGTTTG+AGG 0.462913 8_1:+89912478 None:intergenic
CAATTTGACTTCATATCTGA+TGG 0.466660 8_1:-89912226 Msa1224820:CDS
GTTTGCTGAATTGAAGCATT+GGG 0.469700 8_1:+89912344 None:intergenic
TTGAAGGTAAGGATGATGAT+TGG 0.473871 8_1:+89912254 None:intergenic
AAGTCAAATTGAAGGGTTGA+AGG 0.475531 8_1:+89912238 None:intergenic
ATGTGACCTTGACTTGGGTA+TGG 0.475859 8_1:+89912370 None:intergenic
TTATGTATCATTTGGAAGCA+TGG 0.479963 8_1:-89910893 Msa1224820:CDS
GGGTTTATGTGACCTTGACT+TGG 0.481353 8_1:+89912364 None:intergenic
TCAATGCCAATTTCTATGCC+AGG 0.483097 8_1:-89911929 Msa1224820:CDS
CAGATATGAAGTCAAATTGA+AGG 0.488866 8_1:+89912230 None:intergenic
AAATTGAAGGGTTGAAGGTA+AGG 0.491787 8_1:+89912243 None:intergenic
ATTGAAGAAATGAGTTCAAG+TGG 0.492000 8_1:-89910757 Msa1224820:CDS
CTGGTCTTCTAGCTTGTAGA+AGG 0.493156 8_1:+89911778 None:intergenic
CTTCTACAAGCTAGAAGACC+AGG 0.493515 8_1:-89911777 Msa1224820:intron
GGTTGCTTTCTAACACATAG+TGG 0.494765 8_1:-89910676 Msa1224820:CDS
GCATTAGGATTATTAGGAAG+TGG 0.500366 8_1:-89910838 Msa1224820:CDS
GAAGCACCACCACTGACATA+AGG 0.502363 8_1:+89910238 None:intergenic
CATAGGCTCCAAGAATTTGA+AGG 0.504127 8_1:-89912140 Msa1224820:CDS
GTTGAGGATGTGTGGAAAGT+GGG 0.506952 8_1:-89910565 Msa1224820:CDS
GAAAGTGGGAATGAGAGTTA+AGG 0.512272 8_1:-89910551 Msa1224820:CDS
TAGTAAGCAGGATAGAAGCC+AGG 0.514306 8_1:+89911860 None:intergenic
GCCAAAGAATTTGACTTACT+AGG 0.518520 8_1:-89912034 Msa1224820:CDS
CTATCCTGCTTACTATGAGA+TGG 0.519933 8_1:-89911852 Msa1224820:CDS
TGTTGAGGATGTGTGGAAAG+TGG 0.525190 8_1:-89910566 Msa1224820:CDS
CCAAAACCCATTGAAGAAAA+GGG 0.527692 8_1:+89912062 None:intergenic
AAATGAGTTCAAGTGGAAAA+GGG 0.528479 8_1:-89910750 Msa1224820:CDS
AAAGTGATGGAAAATGACAT+TGG 0.536596 8_1:-89910478 Msa1224820:CDS
ATTGTGTTTAGGAGTGCCTA+TGG 0.537967 8_1:-89910632 Msa1224820:CDS
GAGTTAAGGTAAATGAGAAT+GGG 0.543847 8_1:-89910537 Msa1224820:CDS
AGATCAAGCAAAGGAAGCCC+TGG 0.546518 8_1:+89911911 None:intergenic
CCAGGGTCATAAACAAAGGA+AGG 0.547762 8_1:+89911878 None:intergenic
ATGTATTATTATGTTTACCA+TGG 0.551919 8_1:-89911974 Msa1224820:CDS
GGTTTATGTGACCTTGACTT+GGG 0.551938 8_1:+89912365 None:intergenic
ATATCTGATGGCTATGATGA+AGG 0.556777 8_1:-89912214 Msa1224820:CDS
CCCTTGTCCAAGTAAAAGGA+TGG 0.556992 8_1:+89911009 None:intergenic
CAATGCCAATTTCTATGCCA+GGG 0.557141 8_1:-89911928 Msa1224820:CDS
CTATCTCACATGAAAACCAT+AGG 0.561539 8_1:-89912157 Msa1224820:CDS
GCTTTCTAACACATAGTGGA+TGG 0.561712 8_1:-89910672 Msa1224820:CDS
CAAAATATGTTGAGGATGTG+TGG 0.562683 8_1:-89910573 Msa1224820:CDS
TAGGAAGCTTTAAAAGTCCA+TGG 0.564480 8_1:+89911957 None:intergenic
ATAACCATCTCATAGTAAGC+AGG 0.564645 8_1:+89911848 None:intergenic
CTTTAGCATAGAGCAAATGA+AGG 0.565909 8_1:-89910866 Msa1224820:CDS
AATTTGTAAATGAGCTGAAG+AGG 0.570594 8_1:-89910366 Msa1224820:CDS
AAGTAAAAGGATGGAACTGT+TGG 0.582183 8_1:+89911018 None:intergenic
CAGGGTCATAAACAAAGGAA+GGG 0.583374 8_1:+89911879 None:intergenic
AGTAAGCAGGATAGAAGCCA+GGG 0.586536 8_1:+89911861 None:intergenic
TTGAGGTGATAATGAATGCA+TGG 0.591573 8_1:+89912495 None:intergenic
ATGGTTCCATACCCAAGTCA+AGG 0.598862 8_1:-89912376 Msa1224820:CDS
GCTTGTATCAATAATAGGAA+AGG 0.601076 8_1:-89912437 Msa1224820:five_prime_UTR
TGGCTGAATTCAAAGCCTGA+AGG 0.601191 8_1:-89910925 Msa1224820:CDS
CACTGTGGTATTGCAACCAT+AGG 0.601959 8_1:+89910616 None:intergenic
AGTGAATTGGATACCACAGT+TGG 0.602235 8_1:-89910722 Msa1224820:CDS
TTATTGATACAAGCACAAGT+TGG 0.606580 8_1:+89912446 None:intergenic
GAAGGTGGCTTTGCTCAAGT+TGG 0.608792 8_1:-89912196 Msa1224820:CDS
TCTCATACAATCCAAATCCA+AGG 0.610873 8_1:+89910274 None:intergenic
AGATATGAAGTCAAATTGAA+GGG 0.612280 8_1:+89912231 None:intergenic
GGATGATGATTGGAGATGCA+TGG 0.615276 8_1:+89912264 None:intergenic
AGGGTCATAAACAAAGGAAG+GGG 0.619189 8_1:+89911880 None:intergenic
GCTATAGAAGCAGTAAGTCA+TGG 0.620556 8_1:-89910415 Msa1224820:CDS
GAGTTCAAGTGGAAAAGGGT+TGG 0.622029 8_1:-89910746 Msa1224820:CDS
GGCTGAATTCAAAGCCTGAA+GGG 0.623236 8_1:-89910924 Msa1224820:CDS
TTAGATAGAACTTCCAACTG+TGG 0.627701 8_1:+89910709 None:intergenic
GAAGCCAGGGTCATAAACAA+AGG 0.633076 8_1:+89911874 None:intergenic
GAGTTGCATTAGGAAAGTGA+TGG 0.636211 8_1:-89910491 Msa1224820:CDS
TTTGAATGCAAAATATGTTG+AGG 0.643170 8_1:-89910581 Msa1224820:CDS
TCTGATGGCTATGATGAAGG+TGG 0.677720 8_1:-89912211 Msa1224820:CDS
AAAAGGAGTTAACGTCACAA+TGG 0.689260 8_1:-89912311 Msa1224820:CDS
GTATCTTTGAGATCAAGCAA+AGG 0.699284 8_1:+89911902 None:intergenic
ATAGAAGCAGTAAGTCATGG+TGG 0.738041 8_1:-89910412 Msa1224820:CDS
AAAGGTTGATCAGTCCACTG+TGG 0.777400 8_1:+89910601 None:intergenic
CTATGGTTGCAATACCACAG+TGG 0.814711 8_1:-89910615 Msa1224820:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAACAATAAATAG+AGG - chr8_1:89911092-89911111 Msa1224820:intron 10.0%
!! AAAAATAAACAATAAATAGA+GGG - chr8_1:89911093-89911112 Msa1224820:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG - chr8_1:89911241-89911260 Msa1224820:intron 10.0%
!! TAAAAATAAACAATAAATAG+AGG - chr8_1:89911092-89911111 Msa1224820:intron 10.0%
!! AAAAATAAACAATAAATAGA+GGG - chr8_1:89911093-89911112 Msa1224820:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG - chr8_1:89911241-89911260 Msa1224820:intron 10.0%
!! AAATAACTTCAAACATAATA+AGG + chr8_1:89910970-89910989 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG + chr8_1:89911270-89911289 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG + chr8_1:89911386-89911405 None:intergenic 15.0%
!!! TATTGATATAAACTGAATTT+TGG - chr8_1:89911548-89911567 Msa1224820:intron 15.0%
!!! ATACATATTAACATTAGTTT+AGG + chr8_1:89912353-89912372 None:intergenic 15.0%
!! ACTAATGTTAATATGTATTA+TGG - chr8_1:89912355-89912374 Msa1224820:CDS 15.0%
!! GTATTTGTTTCAATTAATAT+TGG - chr8_1:89912392-89912411 Msa1224820:CDS 15.0%
!! AAATAACTTCAAACATAATA+AGG + chr8_1:89910970-89910989 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG + chr8_1:89911270-89911289 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG + chr8_1:89911386-89911405 None:intergenic 15.0%
!!! TATTGATATAAACTGAATTT+TGG - chr8_1:89911548-89911567 Msa1224820:intron 15.0%
!!! ATACATATTAACATTAGTTT+AGG + chr8_1:89912353-89912372 None:intergenic 15.0%
!! ACTAATGTTAATATGTATTA+TGG - chr8_1:89912355-89912374 Msa1224820:CDS 15.0%
!! GTATTTGTTTCAATTAATAT+TGG - chr8_1:89912392-89912411 Msa1224820:CDS 15.0%
!! AATTTAGAGAACTGAATATA+TGG + chr8_1:89910224-89910243 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG - chr8_1:89910718-89910737 Msa1224820:CDS 20.0%
!! ACATAATAAGGAATATAAAG+AGG + chr8_1:89910958-89910977 None:intergenic 20.0%
!!! TTTGTTTCTTACGAAAAAAT+CGG + chr8_1:89911164-89911183 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG + chr8_1:89911271-89911290 None:intergenic 20.0%
!! ATTAAAAGTAAGTAAGTTAG+TGG + chr8_1:89911293-89911312 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG + chr8_1:89911431-89911450 None:intergenic 20.0%
!!! ACCTCATATTTTAATTAATG+TGG - chr8_1:89911497-89911516 Msa1224820:intron 20.0%
!! ACCACATTAATTAAAATATG+AGG + chr8_1:89911501-89911520 None:intergenic 20.0%
!! TTCCATATGAATGATATATA+AGG - chr8_1:89911607-89911626 Msa1224820:intron 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG + chr8_1:89911901-89911920 None:intergenic 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG + chr8_1:89911902-89911921 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG - chr8_1:89912245-89912264 Msa1224820:CDS 20.0%
!! AATTTAGAGAACTGAATATA+TGG + chr8_1:89910224-89910243 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG - chr8_1:89910718-89910737 Msa1224820:CDS 20.0%
!! ACATAATAAGGAATATAAAG+AGG + chr8_1:89910958-89910977 None:intergenic 20.0%
!!! TTTGTTTCTTACGAAAAAAT+CGG + chr8_1:89911164-89911183 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG + chr8_1:89911271-89911290 None:intergenic 20.0%
!! ATTAAAAGTAAGTAAGTTAG+TGG + chr8_1:89911293-89911312 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG + chr8_1:89911431-89911450 None:intergenic 20.0%
!!! ACCTCATATTTTAATTAATG+TGG - chr8_1:89911497-89911516 Msa1224820:intron 20.0%
!! ACCACATTAATTAAAATATG+AGG + chr8_1:89911501-89911520 None:intergenic 20.0%
!! TTCCATATGAATGATATATA+AGG - chr8_1:89911607-89911626 Msa1224820:intron 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG + chr8_1:89911901-89911920 None:intergenic 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG + chr8_1:89911902-89911921 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG - chr8_1:89912245-89912264 Msa1224820:CDS 20.0%
! ATCAATAATAGGAAAGGAAA+TGG - chr8_1:89910261-89910280 Msa1224820:three_prime_UTR 25.0%
!!! TAGTAGTATGCATGTTTTAA+TGG - chr8_1:89910297-89910316 Msa1224820:three_prime_UTR 25.0%
! AGATATGAAGTCAAATTGAA+GGG + chr8_1:89910464-89910483 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG + chr8_1:89910609-89910628 None:intergenic 25.0%
! TCATATACTACACAATCTAT+AGG + chr8_1:89910610-89910629 None:intergenic 25.0%
! TAATAAGGAATATAAAGAGG+AGG + chr8_1:89910955-89910974 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG + chr8_1:89911045-89911064 None:intergenic 25.0%
! AATAAACAATAAATAGAGGG+TGG - chr8_1:89911096-89911115 Msa1224820:intron 25.0%
!! GGACAAATTTTTAAATGTGT+TGG + chr8_1:89911344-89911363 None:intergenic 25.0%
!!! GGTCATTTTTATAAGAAACA+TGG + chr8_1:89911365-89911384 None:intergenic 25.0%
! CATATACATATAAATGGTCA+CGG + chr8_1:89911425-89911444 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG + chr8_1:89911612-89911631 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG - chr8_1:89911610-89911629 Msa1224820:intron 25.0%
! TATGTCCAATATTGACAATT+GGG - chr8_1:89911651-89911670 Msa1224820:intron 25.0%
! AAATCATTGTCTTTGTCATT+TGG + chr8_1:89911713-89911732 None:intergenic 25.0%
! TCAGCTATTTATGTATCATT+TGG - chr8_1:89911791-89911810 Msa1224820:CDS 25.0%
! GAAATAGCATTAGGATTATT+AGG - chr8_1:89911848-89911867 Msa1224820:CDS 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG - chr8_1:89911871-89911890 Msa1224820:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG + chr8_1:89912112-89912131 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG - chr8_1:89912111-89912130 Msa1224820:CDS 25.0%
!! TATTATTTTCCTTATGTCAG+TGG - chr8_1:89912445-89912464 Msa1224820:five_prime_UTR 25.0%
! ATCAATAATAGGAAAGGAAA+TGG - chr8_1:89910261-89910280 Msa1224820:three_prime_UTR 25.0%
!!! TAGTAGTATGCATGTTTTAA+TGG - chr8_1:89910297-89910316 Msa1224820:three_prime_UTR 25.0%
! AGATATGAAGTCAAATTGAA+GGG + chr8_1:89910464-89910483 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG + chr8_1:89910609-89910628 None:intergenic 25.0%
! TCATATACTACACAATCTAT+AGG + chr8_1:89910610-89910629 None:intergenic 25.0%
! TAATAAGGAATATAAAGAGG+AGG + chr8_1:89910955-89910974 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG + chr8_1:89911045-89911064 None:intergenic 25.0%
! AATAAACAATAAATAGAGGG+TGG - chr8_1:89911096-89911115 Msa1224820:intron 25.0%
!! GGACAAATTTTTAAATGTGT+TGG + chr8_1:89911344-89911363 None:intergenic 25.0%
!!! GGTCATTTTTATAAGAAACA+TGG + chr8_1:89911365-89911384 None:intergenic 25.0%
! CATATACATATAAATGGTCA+CGG + chr8_1:89911425-89911444 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG + chr8_1:89911612-89911631 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG - chr8_1:89911610-89911629 Msa1224820:intron 25.0%
! TATGTCCAATATTGACAATT+GGG - chr8_1:89911651-89911670 Msa1224820:intron 25.0%
! AAATCATTGTCTTTGTCATT+TGG + chr8_1:89911713-89911732 None:intergenic 25.0%
! TCAGCTATTTATGTATCATT+TGG - chr8_1:89911791-89911810 Msa1224820:CDS 25.0%
! GAAATAGCATTAGGATTATT+AGG - chr8_1:89911848-89911867 Msa1224820:CDS 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG - chr8_1:89911871-89911890 Msa1224820:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG + chr8_1:89912112-89912131 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG - chr8_1:89912111-89912130 Msa1224820:CDS 25.0%
!! TATTATTTTCCTTATGTCAG+TGG - chr8_1:89912445-89912464 Msa1224820:five_prime_UTR 25.0%
!!! AATGAATGCATGGTTTTGTA+CGG + chr8_1:89910190-89910209 None:intergenic 30.0%
AGAACTGAATATATGGTTTG+AGG + chr8_1:89910217-89910236 None:intergenic 30.0%
TTATTGATACAAGCACAAGT+TGG + chr8_1:89910249-89910268 None:intergenic 30.0%
CTTGTGCTTGTATCAATAAT+AGG - chr8_1:89910250-89910269 Msa1224820:three_prime_UTR 30.0%
GCTTGTATCAATAATAGGAA+AGG - chr8_1:89910255-89910274 Msa1224820:three_prime_UTR 30.0%
CAGATATGAAGTCAAATTGA+AGG + chr8_1:89910465-89910484 None:intergenic 30.0%
! CAATTTGACTTCATATCTGA+TGG - chr8_1:89910466-89910485 Msa1224820:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG + chr8_1:89910563-89910582 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG - chr8_1:89910623-89910642 Msa1224820:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG - chr8_1:89910624-89910643 Msa1224820:CDS 30.0%
TCCTAGTAAGTCAAATTCTT+TGG + chr8_1:89910662-89910681 None:intergenic 30.0%
! GAAATTGGCATTGAAGATAT+AGG + chr8_1:89910757-89910776 None:intergenic 30.0%
CAAGAATGATATCTGCTTTA+TGG + chr8_1:89910888-89910907 None:intergenic 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG + chr8_1:89911205-89911224 None:intergenic 30.0%
TACATGATTCTGTTATGTGA+TGG + chr8_1:89911467-89911486 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG - chr8_1:89911559-89911578 Msa1224820:intron 30.0%
ATGAATGATATATAAGGTGG+TGG - chr8_1:89911613-89911632 Msa1224820:intron 30.0%
CTATGTCCAATATTGACAAT+TGG - chr8_1:89911650-89911669 Msa1224820:intron 30.0%
TTTGAATTCAGCCAATCAAT+AGG + chr8_1:89911761-89911780 None:intergenic 30.0%
TTATGTATCATTTGGAAGCA+TGG - chr8_1:89911799-89911818 Msa1224820:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG - chr8_1:89911839-89911858 Msa1224820:CDS 30.0%
GAAGTGGTTCAAATTTCTTA+TGG - chr8_1:89911870-89911889 Msa1224820:CDS 30.0%
ATTGAAGAAATGAGTTCAAG+TGG - chr8_1:89911935-89911954 Msa1224820:CDS 30.0%
AAATGAGTTCAAGTGGAAAA+GGG - chr8_1:89911942-89911961 Msa1224820:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG - chr8_1:89911995-89912014 Msa1224820:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG - chr8_1:89912154-89912173 Msa1224820:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG - chr8_1:89912155-89912174 Msa1224820:CDS 30.0%
! AAAGTGATGGAAAATGACAT+TGG - chr8_1:89912214-89912233 Msa1224820:CDS 30.0%
AATTTGTAAATGAGCTGAAG+AGG - chr8_1:89912326-89912345 Msa1224820:CDS 30.0%
TCAATTAATATTGGAGTCCT+TGG - chr8_1:89912401-89912420 Msa1224820:CDS 30.0%
!!! AATGAATGCATGGTTTTGTA+CGG + chr8_1:89910190-89910209 None:intergenic 30.0%
AGAACTGAATATATGGTTTG+AGG + chr8_1:89910217-89910236 None:intergenic 30.0%
TTATTGATACAAGCACAAGT+TGG + chr8_1:89910249-89910268 None:intergenic 30.0%
CTTGTGCTTGTATCAATAAT+AGG - chr8_1:89910250-89910269 Msa1224820:three_prime_UTR 30.0%
GCTTGTATCAATAATAGGAA+AGG - chr8_1:89910255-89910274 Msa1224820:three_prime_UTR 30.0%
CAGATATGAAGTCAAATTGA+AGG + chr8_1:89910465-89910484 None:intergenic 30.0%
! CAATTTGACTTCATATCTGA+TGG - chr8_1:89910466-89910485 Msa1224820:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG + chr8_1:89910563-89910582 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG - chr8_1:89910623-89910642 Msa1224820:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG - chr8_1:89910624-89910643 Msa1224820:CDS 30.0%
TCCTAGTAAGTCAAATTCTT+TGG + chr8_1:89910662-89910681 None:intergenic 30.0%
! GAAATTGGCATTGAAGATAT+AGG + chr8_1:89910757-89910776 None:intergenic 30.0%
CAAGAATGATATCTGCTTTA+TGG + chr8_1:89910888-89910907 None:intergenic 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG + chr8_1:89911205-89911224 None:intergenic 30.0%
TACATGATTCTGTTATGTGA+TGG + chr8_1:89911467-89911486 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG - chr8_1:89911559-89911578 Msa1224820:intron 30.0%
ATGAATGATATATAAGGTGG+TGG - chr8_1:89911613-89911632 Msa1224820:intron 30.0%
CTATGTCCAATATTGACAAT+TGG - chr8_1:89911650-89911669 Msa1224820:intron 30.0%
TTTGAATTCAGCCAATCAAT+AGG + chr8_1:89911761-89911780 None:intergenic 30.0%
TTATGTATCATTTGGAAGCA+TGG - chr8_1:89911799-89911818 Msa1224820:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG - chr8_1:89911839-89911858 Msa1224820:CDS 30.0%
GAAGTGGTTCAAATTTCTTA+TGG - chr8_1:89911870-89911889 Msa1224820:CDS 30.0%
ATTGAAGAAATGAGTTCAAG+TGG - chr8_1:89911935-89911954 Msa1224820:CDS 30.0%
AAATGAGTTCAAGTGGAAAA+GGG - chr8_1:89911942-89911961 Msa1224820:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG - chr8_1:89911995-89912014 Msa1224820:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG - chr8_1:89912154-89912173 Msa1224820:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG - chr8_1:89912155-89912174 Msa1224820:CDS 30.0%
! AAAGTGATGGAAAATGACAT+TGG - chr8_1:89912214-89912233 Msa1224820:CDS 30.0%
AATTTGTAAATGAGCTGAAG+AGG - chr8_1:89912326-89912345 Msa1224820:CDS 30.0%
TCAATTAATATTGGAGTCCT+TGG - chr8_1:89912401-89912420 Msa1224820:CDS 30.0%
! TTGAGGTGATAATGAATGCA+TGG + chr8_1:89910200-89910219 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG + chr8_1:89910351-89910370 None:intergenic 35.0%
AAAAGGAGTTAACGTCACAA+TGG - chr8_1:89910381-89910400 Msa1224820:CDS 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG + chr8_1:89910413-89910432 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG + chr8_1:89910441-89910460 None:intergenic 35.0%
AAATTGAAGGGTTGAAGGTA+AGG + chr8_1:89910452-89910471 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG + chr8_1:89910457-89910476 None:intergenic 35.0%
ATATCTGATGGCTATGATGA+AGG - chr8_1:89910478-89910497 Msa1224820:CDS 35.0%
CTATCTCACATGAAAACCAT+AGG - chr8_1:89910535-89910554 Msa1224820:CDS 35.0%
CCAAAACCCATTGAAGAAAA+GGG + chr8_1:89910633-89910652 None:intergenic 35.0%
TCCAAAACCCATTGAAGAAA+AGG + chr8_1:89910634-89910653 None:intergenic 35.0%
! GCCAAAGAATTTGACTTACT+AGG - chr8_1:89910658-89910677 Msa1224820:CDS 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG + chr8_1:89910738-89910757 None:intergenic 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG + chr8_1:89910793-89910812 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG + chr8_1:89910847-89910866 None:intergenic 35.0%
TAAGGAATATAAAGAGGAGG+AGG + chr8_1:89910952-89910971 None:intergenic 35.0%
TCATCAATTCCATAGACCTA+TGG - chr8_1:89910992-89911011 Msa1224820:CDS 35.0%
ACTAATCTTCCATAGGTCTA+TGG + chr8_1:89911004-89911023 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG - chr8_1:89911003-89911022 Msa1224820:CDS 35.0%
TAGACCTATGGAAGATTAGT+GGG - chr8_1:89911004-89911023 Msa1224820:CDS 35.0%
GTTTCTTACGAAAAAATCGG+AGG + chr8_1:89911161-89911180 None:intergenic 35.0%
AAGTAAAAGGATGGAACTGT+TGG + chr8_1:89911677-89911696 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG - chr8_1:89911676-89911695 Msa1224820:intron 35.0%
CAATAGGTGATGAGTCTAAT+TGG + chr8_1:89911745-89911764 None:intergenic 35.0%
TAGACTCATCACCTATTGAT+TGG - chr8_1:89911747-89911766 Msa1224820:intron 35.0%
CTTTAGCATAGAGCAAATGA+AGG - chr8_1:89911826-89911845 Msa1224820:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG - chr8_1:89911854-89911873 Msa1224820:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG - chr8_1:89911886-89911905 Msa1224820:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG - chr8_1:89911941-89911960 Msa1224820:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG + chr8_1:89911986-89912005 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG - chr8_1:89912049-89912068 Msa1224820:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG - chr8_1:89912119-89912138 Msa1224820:CDS 35.0%
AAGAGATTGAGAGTTGCATT+AGG - chr8_1:89912191-89912210 Msa1224820:CDS 35.0%
TGCTAAGAAATGGAGAGAAT+TGG - chr8_1:89912255-89912274 Msa1224820:CDS 35.0%
AATATTGGAGTCCTTGGATT+TGG - chr8_1:89912407-89912426 Msa1224820:CDS 35.0%
TCTCATACAATCCAAATCCA+AGG + chr8_1:89912421-89912440 None:intergenic 35.0%
! TATTTTCCTTATGTCAGTGG+TGG - chr8_1:89912448-89912467 Msa1224820:five_prime_UTR 35.0%
! TTGAGGTGATAATGAATGCA+TGG + chr8_1:89910200-89910219 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG + chr8_1:89910351-89910370 None:intergenic 35.0%
AAAAGGAGTTAACGTCACAA+TGG - chr8_1:89910381-89910400 Msa1224820:CDS 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG + chr8_1:89910413-89910432 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG + chr8_1:89910441-89910460 None:intergenic 35.0%
AAATTGAAGGGTTGAAGGTA+AGG + chr8_1:89910452-89910471 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG + chr8_1:89910457-89910476 None:intergenic 35.0%
ATATCTGATGGCTATGATGA+AGG - chr8_1:89910478-89910497 Msa1224820:CDS 35.0%
CTATCTCACATGAAAACCAT+AGG - chr8_1:89910535-89910554 Msa1224820:CDS 35.0%
CCAAAACCCATTGAAGAAAA+GGG + chr8_1:89910633-89910652 None:intergenic 35.0%
TCCAAAACCCATTGAAGAAA+AGG + chr8_1:89910634-89910653 None:intergenic 35.0%
! GCCAAAGAATTTGACTTACT+AGG - chr8_1:89910658-89910677 Msa1224820:CDS 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG + chr8_1:89910738-89910757 None:intergenic 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG + chr8_1:89910793-89910812 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG + chr8_1:89910847-89910866 None:intergenic 35.0%
TAAGGAATATAAAGAGGAGG+AGG + chr8_1:89910952-89910971 None:intergenic 35.0%
TCATCAATTCCATAGACCTA+TGG - chr8_1:89910992-89911011 Msa1224820:CDS 35.0%
ACTAATCTTCCATAGGTCTA+TGG + chr8_1:89911004-89911023 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG - chr8_1:89911003-89911022 Msa1224820:CDS 35.0%
TAGACCTATGGAAGATTAGT+GGG - chr8_1:89911004-89911023 Msa1224820:CDS 35.0%
GTTTCTTACGAAAAAATCGG+AGG + chr8_1:89911161-89911180 None:intergenic 35.0%
AAGTAAAAGGATGGAACTGT+TGG + chr8_1:89911677-89911696 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG - chr8_1:89911676-89911695 Msa1224820:intron 35.0%
CAATAGGTGATGAGTCTAAT+TGG + chr8_1:89911745-89911764 None:intergenic 35.0%
TAGACTCATCACCTATTGAT+TGG - chr8_1:89911747-89911766 Msa1224820:intron 35.0%
CTTTAGCATAGAGCAAATGA+AGG - chr8_1:89911826-89911845 Msa1224820:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG - chr8_1:89911854-89911873 Msa1224820:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG - chr8_1:89911886-89911905 Msa1224820:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG - chr8_1:89911941-89911960 Msa1224820:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG + chr8_1:89911986-89912005 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG - chr8_1:89912049-89912068 Msa1224820:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG - chr8_1:89912119-89912138 Msa1224820:CDS 35.0%
AAGAGATTGAGAGTTGCATT+AGG - chr8_1:89912191-89912210 Msa1224820:CDS 35.0%
TGCTAAGAAATGGAGAGAAT+TGG - chr8_1:89912255-89912274 Msa1224820:CDS 35.0%
AATATTGGAGTCCTTGGATT+TGG - chr8_1:89912407-89912426 Msa1224820:CDS 35.0%
TCTCATACAATCCAAATCCA+AGG + chr8_1:89912421-89912440 None:intergenic 35.0%
! TATTTTCCTTATGTCAGTGG+TGG - chr8_1:89912448-89912467 Msa1224820:five_prime_UTR 35.0%
GGTTTATGTGACCTTGACTT+GGG + chr8_1:89910330-89910349 None:intergenic 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG + chr8_1:89910352-89910371 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG - chr8_1:89910364-89910383 Msa1224820:CDS 40.0%
! TGATTGGAGATGCATGGTTT+TGG + chr8_1:89910425-89910444 None:intergenic 40.0%
CTTCAAATTCTTGGAGCCTA+TGG + chr8_1:89910554-89910573 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG - chr8_1:89910552-89910571 Msa1224820:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG - chr8_1:89910630-89910649 Msa1224820:CDS 40.0%
TCAATGCCAATTTCTATGCC+AGG - chr8_1:89910763-89910782 Msa1224820:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG - chr8_1:89910764-89910783 Msa1224820:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG + chr8_1:89910815-89910834 None:intergenic 40.0%
CAGGGTCATAAACAAAGGAA+GGG + chr8_1:89910816-89910835 None:intergenic 40.0%
CTATCCTGCTTACTATGAGA+TGG - chr8_1:89910840-89910859 Msa1224820:CDS 40.0%
GTTGGCCCAATTGTCAATAT+TGG + chr8_1:89911659-89911678 None:intergenic 40.0%
! TCCATCCTTTTACTTGGACA+AGG - chr8_1:89911682-89911701 Msa1224820:intron 40.0%
! CCATCCTTTTACTTGGACAA+GGG - chr8_1:89911683-89911702 Msa1224820:intron 40.0%
TACTCCCTTGTCCAAGTAAA+AGG + chr8_1:89911690-89911709 None:intergenic 40.0%
ACATAAATAGCTGACCCTTC+AGG + chr8_1:89911785-89911804 None:intergenic 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG - chr8_1:89911957-89911976 Msa1224820:CDS 40.0%
AGTGAATTGGATACCACAGT+TGG - chr8_1:89911970-89911989 Msa1224820:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG - chr8_1:89912016-89912035 Msa1224820:CDS 40.0%
! GCTTTCTAACACATAGTGGA+TGG - chr8_1:89912020-89912039 Msa1224820:CDS 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG - chr8_1:89912060-89912079 Msa1224820:CDS 40.0%
GAAAGTGGGAATGAGAGTTA+AGG - chr8_1:89912141-89912160 Msa1224820:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG - chr8_1:89912201-89912220 Msa1224820:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG - chr8_1:89912277-89912296 Msa1224820:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG - chr8_1:89912280-89912299 Msa1224820:CDS 40.0%
GGTTTATGTGACCTTGACTT+GGG + chr8_1:89910330-89910349 None:intergenic 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG + chr8_1:89910352-89910371 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG - chr8_1:89910364-89910383 Msa1224820:CDS 40.0%
! TGATTGGAGATGCATGGTTT+TGG + chr8_1:89910425-89910444 None:intergenic 40.0%
CTTCAAATTCTTGGAGCCTA+TGG + chr8_1:89910554-89910573 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG - chr8_1:89910552-89910571 Msa1224820:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG - chr8_1:89910630-89910649 Msa1224820:CDS 40.0%
TCAATGCCAATTTCTATGCC+AGG - chr8_1:89910763-89910782 Msa1224820:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG - chr8_1:89910764-89910783 Msa1224820:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG + chr8_1:89910815-89910834 None:intergenic 40.0%
CAGGGTCATAAACAAAGGAA+GGG + chr8_1:89910816-89910835 None:intergenic 40.0%
CTATCCTGCTTACTATGAGA+TGG - chr8_1:89910840-89910859 Msa1224820:CDS 40.0%
GTTGGCCCAATTGTCAATAT+TGG + chr8_1:89911659-89911678 None:intergenic 40.0%
! TCCATCCTTTTACTTGGACA+AGG - chr8_1:89911682-89911701 Msa1224820:intron 40.0%
! CCATCCTTTTACTTGGACAA+GGG - chr8_1:89911683-89911702 Msa1224820:intron 40.0%
TACTCCCTTGTCCAAGTAAA+AGG + chr8_1:89911690-89911709 None:intergenic 40.0%
ACATAAATAGCTGACCCTTC+AGG + chr8_1:89911785-89911804 None:intergenic 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG - chr8_1:89911957-89911976 Msa1224820:CDS 40.0%
AGTGAATTGGATACCACAGT+TGG - chr8_1:89911970-89911989 Msa1224820:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG - chr8_1:89912016-89912035 Msa1224820:CDS 40.0%
! GCTTTCTAACACATAGTGGA+TGG - chr8_1:89912020-89912039 Msa1224820:CDS 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG - chr8_1:89912060-89912079 Msa1224820:CDS 40.0%
GAAAGTGGGAATGAGAGTTA+AGG - chr8_1:89912141-89912160 Msa1224820:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG - chr8_1:89912201-89912220 Msa1224820:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG - chr8_1:89912277-89912296 Msa1224820:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG - chr8_1:89912280-89912299 Msa1224820:CDS 40.0%
ATGGTTCCATACCCAAGTCA+AGG - chr8_1:89910316-89910335 Msa1224820:three_prime_UTR 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG + chr8_1:89910325-89910344 None:intergenic 45.0%
GGGTTTATGTGACCTTGACT+TGG + chr8_1:89910331-89910350 None:intergenic 45.0%
GGATGATGATTGGAGATGCA+TGG + chr8_1:89910431-89910450 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG - chr8_1:89910481-89910500 Msa1224820:CDS 45.0%
CCAGGGTCATAAACAAAGGA+AGG + chr8_1:89910817-89910836 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG - chr8_1:89910814-89910833 Msa1224820:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG + chr8_1:89910821-89910840 None:intergenic 45.0%
AGTAAGCAGGATAGAAGCCA+GGG + chr8_1:89910834-89910853 None:intergenic 45.0%
TAGTAAGCAGGATAGAAGCC+AGG + chr8_1:89910835-89910854 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG + chr8_1:89910917-89910936 None:intergenic 45.0%
CTTCTACAAGCTAGAAGACC+AGG - chr8_1:89910915-89910934 Msa1224820:CDS 45.0%
GAGGAGGTGAGTAAAAAACC+TGG + chr8_1:89910936-89910955 None:intergenic 45.0%
GTGTCCCACTAATCTTCCAT+AGG + chr8_1:89911011-89911030 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG + chr8_1:89911686-89911705 None:intergenic 45.0%
TGGCTGAATTCAAAGCCTGA+AGG - chr8_1:89911767-89911786 Msa1224820:intron 45.0%
GGCTGAATTCAAAGCCTGAA+GGG - chr8_1:89911768-89911787 Msa1224820:intron 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG - chr8_1:89911946-89911965 Msa1224820:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG + chr8_1:89912079-89912098 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG - chr8_1:89912077-89912096 Msa1224820:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG + chr8_1:89912094-89912113 None:intergenic 45.0%
TGTTGAGGATGTGTGGAAAG+TGG - chr8_1:89912126-89912145 Msa1224820:CDS 45.0%
GTTGAGGATGTGTGGAAAGT+GGG - chr8_1:89912127-89912146 Msa1224820:CDS 45.0%
CACACACTCAAACACCAAAC+AGG - chr8_1:89912513-89912532 Msa1224820:five_prime_UTR 45.0%
ATGGTTCCATACCCAAGTCA+AGG - chr8_1:89910316-89910335 Msa1224820:three_prime_UTR 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG + chr8_1:89910325-89910344 None:intergenic 45.0%
GGGTTTATGTGACCTTGACT+TGG + chr8_1:89910331-89910350 None:intergenic 45.0%
GGATGATGATTGGAGATGCA+TGG + chr8_1:89910431-89910450 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG - chr8_1:89910481-89910500 Msa1224820:CDS 45.0%
CCAGGGTCATAAACAAAGGA+AGG + chr8_1:89910817-89910836 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG - chr8_1:89910814-89910833 Msa1224820:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG + chr8_1:89910821-89910840 None:intergenic 45.0%
AGTAAGCAGGATAGAAGCCA+GGG + chr8_1:89910834-89910853 None:intergenic 45.0%
TAGTAAGCAGGATAGAAGCC+AGG + chr8_1:89910835-89910854 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG + chr8_1:89910917-89910936 None:intergenic 45.0%
CTTCTACAAGCTAGAAGACC+AGG - chr8_1:89910915-89910934 Msa1224820:CDS 45.0%
GAGGAGGTGAGTAAAAAACC+TGG + chr8_1:89910936-89910955 None:intergenic 45.0%
GTGTCCCACTAATCTTCCAT+AGG + chr8_1:89911011-89911030 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG + chr8_1:89911686-89911705 None:intergenic 45.0%
TGGCTGAATTCAAAGCCTGA+AGG - chr8_1:89911767-89911786 Msa1224820:intron 45.0%
GGCTGAATTCAAAGCCTGAA+GGG - chr8_1:89911768-89911787 Msa1224820:intron 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG - chr8_1:89911946-89911965 Msa1224820:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG + chr8_1:89912079-89912098 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG - chr8_1:89912077-89912096 Msa1224820:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG + chr8_1:89912094-89912113 None:intergenic 45.0%
TGTTGAGGATGTGTGGAAAG+TGG - chr8_1:89912126-89912145 Msa1224820:CDS 45.0%
GTTGAGGATGTGTGGAAAGT+GGG - chr8_1:89912127-89912146 Msa1224820:CDS 45.0%
! GAAGGTGGCTTTGCTCAAGT+TGG - chr8_1:89910496-89910515 Msa1224820:CDS 50.0%
GGAAGCCCTGGCATAGAAAT+TGG + chr8_1:89910772-89910791 None:intergenic 50.0%
AGATCAAGCAAAGGAAGCCC+TGG + chr8_1:89910784-89910803 None:intergenic 50.0%
! GAAGCACCACCACTGACATA+AGG + chr8_1:89912457-89912476 None:intergenic 50.0%
! GAAGGTGGCTTTGCTCAAGT+TGG - chr8_1:89910496-89910515 Msa1224820:CDS 50.0%
GGAAGCCCTGGCATAGAAAT+TGG + chr8_1:89910772-89910791 None:intergenic 50.0%
AGATCAAGCAAAGGAAGCCC+TGG + chr8_1:89910784-89910803 None:intergenic 50.0%
! GAAGCACCACCACTGACATA+AGG + chr8_1:89912457-89912476 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 89910182 89912532 89910182 ID=Msa1224820;Name=Msa1224820
chr8_1 mRNA 89910182 89912532 89910182 ID=Msa1224820-mRNA-1;Parent=Msa1224820;Name=Msa1224820-mRNA-1;_AED=0.05;_eAED=0.05;_QI=98|1|1|1|1|1|2|178|460
chr8_1 exon 89910182 89911085 89910182 ID=Msa1224820-mRNA-1:exon:32655;Parent=Msa1224820-mRNA-1
chr8_1 exon 89911778 89912532 89911778 ID=Msa1224820-mRNA-1:exon:32654;Parent=Msa1224820-mRNA-1
chr8_1 five_prime_UTR 89912435 89912532 89912435 ID=Msa1224820-mRNA-1:five_prime_utr;Parent=Msa1224820-mRNA-1
chr8_1 CDS 89911778 89912434 89911778 ID=Msa1224820-mRNA-1:cds;Parent=Msa1224820-mRNA-1
chr8_1 CDS 89910360 89911085 89910360 ID=Msa1224820-mRNA-1:cds;Parent=Msa1224820-mRNA-1
chr8_1 three_prime_UTR 89910182 89910359 89910182 ID=Msa1224820-mRNA-1:three_prime_utr;Parent=Msa1224820-mRNA-1
Gene Sequence

>Msa1224820

ATGGAAGAGAGAAAGAGTAGTAGTATGCATGTTTTAATGGTTCCATACCCAAGTCAAGGTCACATAAACCCAATGCTTCAATTCAGCAAACGTTTGAGCACAAAAGGAGTTAACGTCACAATGGTCACAACCATTTTCATCTCCAAAACCATGCATCTCCAATCATCATCCTTACCTTCAACCCTTCAATTTGACTTCATATCTGATGGCTATGATGAAGGTGGCTTTGCTCAAGTTGGCAACATATCAATCTATCTATCTCACATGAAAACCATAGGCTCCAAGAATTTGAAGGAACTCATTCAAAAACATAATGTTTCTGATCACCCTATAGATTGTGTAGTATATGACCCTTTTCTTCAATGGGTTTTGGATGTAGCCAAAGAATTTGACTTACTAGGAGCTGCTTTTTTCACTCAAATGTGTGCTGTCAATTACATGTATTATTATGTTTACCATGGACTTTTAAAGCTTCCTATATCTTCAATGCCAATTTCTATGCCAGGGCTTCCTTTGCTTGATCTCAAAGATACCCCTTCCTTTGTTTATGACCCTGGCTTCTATCCTGCTTACTATGAGATGGTTATGAATCAATATTCTAACATCCATAAAGCAGATATCATTCTTGTCAATTCCTTCTACAAGCTAGAAGACCAGGTGGTGGATTCTATGTCAAAGCTATGTCCAATATTGACAATTGGGCCAACAGTTCCATCCTTTTACTTGGACAAGGGAGTACCAAATGACAAAGACAATGATTTGAATCTCTTCCAATTAGACTCATCACCTATTGATTGGCTGAATTCAAAGCCTGAAGGGTCAGCTATTTATGTATCATTTGGAAGCATGGTATGCTTTAGCATAGAGCAAATGAAGGAAATAGCATTAGGATTATTAGGAAGTGGTTCAAATTTCTTATGGGTAATCCCTAATATGGAGAAAAAGAATATCTCAAAAGAGTTGATTGAAGAAATGAGTTCAAGTGGAAAAGGGTTGGTAGTGAATTGGATACCACAGTTGGAAGTTCTATCTAACAAAGCTATTGGTTGCTTTCTAACACATAGTGGATGGAATTCAACACTTGAAGCATTGTGTTTAGGAGTGCCTATGGTTGCAATACCACAGTGGACTGATCAACCTTTGAATGCAAAATATGTTGAGGATGTGTGGAAAGTGGGAATGAGAGTTAAGGTAAATGAGAATGGGATTGTGACAAAAGAAGAGATTGAGAGTTGCATTAGGAAAGTGATGGAAAATGACATTGGAAGAGAAATGAAAATTAATGCTAAGAAATGGAGAGAATTGGCTATAGAAGCAGTAAGTCATGGTGGCACTTCAGATAACAACATCAATGAATTTGTAAATGAGCTGAAGAGGTCCTAA
Protein sequence

>Msa1224820

MEERKSSSMHVLMVPYPSQGHINPMLQFSKRLSTKGVNVTMVTTIFISKTMHLQSSSLPSTLQFDFISDGYDEGGFAQVGNISIYLSHMKTIGSKNLKELIQKHNVSDHPIDCVVYDPFLQWVLDVAKEFDLLGAAFFTQMCAVNYMYYYVYHGLLKLPISSMPISMPGLPLLDLKDTPSFVYDPGFYPAYYEMVMNQYSNIHKADIILVNSFYKLEDQVVDSMSKLCPILTIGPTVPSFYLDKGVPNDKDNDLNLFQLDSSPIDWLNSKPEGSAIYVSFGSMVCFSIEQMKEIALGLLGSGSNFLWVIPNMEKKNISKELIEEMSSSGKGLVVNWIPQLEVLSNKAIGCFLTHSGWNSTLEALCLGVPMVAIPQWTDQPLNAKYVEDVWKVGMRVKVNENGIVTKEEIESCIRKVMENDIGREMKINAKKWRELAIEAVSHGGTSDNNINEFVNELKRS*