AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0450890


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450890 MtrunA17_Chr3g0095421 98.365 367 5 1 1 367 1 366 0.0 736
Msa0450890 MtrunA17_Chr3g0127491 40.979 327 179 7 34 355 34 351 4.24e-78 244
Msa0450890 MtrunA17_Chr7g0221791 33.333 336 181 12 38 357 6 314 1.01e-34 130
Msa0450890 MtrunA17_Chr7g0222171 30.612 343 182 11 38 357 6 315 6.10e-33 125
Msa0450890 MtrunA17_Chr7g0274061 31.024 332 187 11 38 351 13 320 1.66e-31 122
Msa0450890 MtrunA17_Chr7g0274071 30.675 326 188 12 39 351 16 316 4.80e-29 115
Msa0450890 MtrunA17_Chr7g0222121 30.894 369 180 13 38 357 6 348 1.17e-28 114
Msa0450890 MtrunA17_Chr1g0204651 29.664 327 191 11 38 349 7 309 5.74e-28 112
Msa0450890 MtrunA17_Chr7g0274041 28.659 328 193 12 38 349 9 311 1.04e-23 100
Msa0450890 MtrunA17_Chr2g0321131 25.737 373 224 16 17 360 33 381 3.12e-22 97.1
Msa0450890 MtrunA17_Chr8g0380261 25.627 359 203 15 45 356 48 389 1.26e-20 92.4
Msa0450890 MtrunA17_Chr1g0167421 24.370 357 217 10 16 332 41 384 1.44e-18 86.7
Msa0450890 MtrunA17_Chr1g0169691 28.617 311 191 10 41 337 6 299 1.09e-17 83.2
Msa0450890 MtrunA17_Chr7g0274081 31.429 175 104 5 187 354 4 169 3.01e-17 79.3
Msa0450890 MtrunA17_Chr4g0018921 25.153 326 173 12 46 352 12 285 2.43e-16 79.0
Msa0450890 MtrunA17_Chr1g0173621 25.914 301 166 10 84 363 45 309 7.72e-16 77.4
Msa0450890 MtrunA17_Chr7g0239701 26.549 226 123 8 145 355 94 291 8.57e-14 71.6
Msa0450890 MtrunA17_Chr5g0447951 26.140 329 159 13 43 345 15 285 1.29e-12 67.8
Msa0450890 MtrunA17_Chr5g0447961 26.140 329 159 13 43 345 15 285 1.29e-12 67.8
Msa0450890 MtrunA17_Chr5g0447941 26.140 329 159 13 43 345 15 285 1.37e-12 67.8
Msa0450890 MtrunA17_Chr3g0121001 25.000 308 168 10 78 360 39 308 2.33e-12 67.0
Msa0450890 MtrunA17_Chr7g0221771 43.210 81 45 1 278 357 8 88 4.52e-12 62.4
Msa0450890 MtrunA17_Chr6g0479981 26.117 291 162 12 80 353 38 292 2.04e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0450890 AT1G06690.1 75.575 348 84 1 21 367 30 377 0.0 556
Msa0450890 AT5G53580.1 42.378 328 163 8 37 353 38 350 1.65e-76 240
Msa0450890 AT1G60750.1 32.000 325 177 10 38 353 10 299 1.38e-30 119
Msa0450890 AT1G60710.1 30.769 338 180 12 38 353 9 314 4.84e-29 115
Msa0450890 AT1G60730.1 30.564 337 182 11 38 353 9 314 6.30e-29 115
Msa0450890 AT1G60680.1 30.699 329 193 9 38 353 9 315 2.53e-28 113
Msa0450890 AT1G10810.1 31.307 329 188 11 38 352 9 313 7.50e-28 112
Msa0450890 AT1G60730.3 29.132 357 181 12 38 353 9 334 7.79e-28 112
Msa0450890 AT1G60690.1 30.861 337 181 12 38 353 9 314 1.83e-27 111
Msa0450890 AT2G27680.1 25.600 375 220 17 18 360 24 371 7.13e-23 99.0
Msa0450890 AT1G10810.3 33.891 239 136 8 128 352 31 261 2.34e-20 90.5
Msa0450890 AT1G04690.1 28.664 307 186 12 41 332 6 294 1.44e-18 85.9
Msa0450890 AT1G04420.1 24.294 354 213 11 19 332 41 379 8.73e-18 84.7
Msa0450890 AT1G60680.2 30.043 233 133 7 38 262 9 219 4.59e-17 80.1
Msa0450890 AT1G10810.2 30.435 230 131 7 38 260 9 216 1.06e-16 79.3
Msa0450890 AT2G21260.1 24.251 334 178 13 44 352 7 290 1.45e-14 73.9
Msa0450890 AT2G37760.5 25.352 284 153 11 80 344 30 273 2.32e-13 70.5
Msa0450890 AT2G37760.4 25.352 284 153 11 80 344 30 273 2.38e-13 70.1
Msa0450890 AT2G37760.3 25.352 284 153 11 80 344 30 273 2.38e-13 70.1
Msa0450890 AT2G37760.2 25.704 284 152 11 80 344 30 273 3.17e-13 70.1
Msa0450890 AT2G37760.1 25.704 284 152 11 80 344 30 273 3.17e-13 70.1
Msa0450890 AT2G21260.2 25.316 237 129 9 140 352 10 222 6.56e-13 68.2
Msa0450890 AT5G62420.1 25.333 300 166 13 72 352 26 286 1.27e-12 68.6
Msa0450890 AT2G37760.6 25.926 216 116 8 145 344 40 227 6.76e-11 62.8
Msa0450890 AT2G37760.7 25.926 216 116 8 145 344 40 227 6.76e-11 62.8

Find 103 sgRNAs with CRISPR-Local

Find 263 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCGACACAGCCGAAGTTTA+TGG 0.136762 3_3:-37329754 Msa0450890:CDS
TGTACCTTTGTTAGGAATTC+TGG 0.171436 3_3:+37327345 None:intergenic
TATAACTTTACAAATGATTT+AGG 0.209980 3_3:+37326786 None:intergenic
TCGAAAATTAAGCCTGTTAT+TGG 0.217835 3_3:-37326874 Msa0450890:CDS
AGTTGAAGATAAGTTGAAAT+TGG 0.220838 3_3:-37330411 Msa0450890:CDS
TAAACTACAGCCTCATTTAT+AGG 0.233447 3_3:-37328464 Msa0450890:CDS
TAGAAGAGTTTCTGAATTTA+CGG 0.235858 3_3:+37329630 None:intergenic
TCTTAAGCAGGTGTTCTTAC+TGG 0.244612 3_3:-37327420 Msa0450890:intron
AGACAAAACTTTATTGAATT+AGG 0.256226 3_3:-37326396 Msa0450890:three_prime_UTR
AGGATTTCACCTTGAGCTAT+TGG 0.277879 3_3:+37328375 None:intergenic
AGAAAAGTTGTACCTTTGTT+AGG 0.288849 3_3:+37327337 None:intergenic
TGGAATTGGAGCTTGGTCTT+GGG 0.303830 3_3:-37330360 Msa0450890:CDS
CTGAAGAAGATCACTGAAAT+AGG 0.304108 3_3:-37327235 Msa0450890:CDS
AAATTGCATTCATAGTAAAT+TGG 0.305786 3_3:-37326743 Msa0450890:three_prime_UTR
TGACCCATCGACACTGAAAT+TGG 0.329657 3_3:+37326530 None:intergenic
GCAACTTCAACTTCAACATT+TGG 0.331638 3_3:+37329488 None:intergenic
TCAACTGGAAAGCCAATAAC+AGG 0.332654 3_3:+37326862 None:intergenic
GAACAAGCTGAAGAATTTAA+AGG 0.335134 3_3:-37326952 Msa0450890:CDS
GTAAATTCAGAAACTCTTCT+AGG 0.336089 3_3:-37329628 Msa0450890:CDS
GGTAGCTGAGCTACGAAGTT+TGG 0.341379 3_3:-37326899 Msa0450890:CDS
TTTGTTAGGTATCACTAAAC+TGG 0.342680 3_3:-37327023 Msa0450890:intron
CCTTCATTTCCCCATATTCC+AGG 0.350979 3_3:+37329266 None:intergenic
TTGGAATTGGAGCTTGGTCT+TGG 0.353357 3_3:-37330361 Msa0450890:CDS
TATAGGGTCCCTGAAGAAAA+TGG 0.367229 3_3:-37328447 Msa0450890:CDS
CTTGGGGTGATACTACTTAC+TGG 0.369955 3_3:-37330343 Msa0450890:CDS
AAGGTGTCAACAATTGGAAT+TGG 0.373397 3_3:-37330374 Msa0450890:CDS
CTAGGTGATGCTGTTCAAAA+AGG 0.374039 3_3:-37329103 Msa0450890:CDS
GTTGAAGATAAGTTGAAATT+GGG 0.392585 3_3:-37330410 Msa0450890:CDS
GATTTGAAGGTGTCAACAAT+TGG 0.398533 3_3:-37330380 Msa0450890:CDS
ACATAATTATCTTGTGGGTT+AGG 0.400873 3_3:-37326468 Msa0450890:three_prime_UTR
CCATGGTAGTGCAGCAAACT+TGG 0.402133 3_3:+37329463 None:intergenic
AAACTACATAATTATCTTGT+GGG 0.403962 3_3:-37326473 Msa0450890:three_prime_UTR
AACTTCGGCTGTGTCGATAA+AGG 0.414516 3_3:+37329759 None:intergenic
GGAAATGTTGTACCAATTCC+TGG 0.415471 3_3:-37326988 Msa0450890:CDS
GAAGAATTTAAAGGTGCATT+GGG 0.420507 3_3:-37326943 Msa0450890:CDS
ACTCCACGAAATCCTCCATC+TGG 0.425582 3_3:-37327390 Msa0450890:CDS
TGGATCTGTATCAGCTTCAT+TGG 0.427317 3_3:-37329373 Msa0450890:intron
ACAGCCGAAGTTTATGGCTC+TGG 0.428679 3_3:-37329748 Msa0450890:CDS
TCAGGGTATATTGATGGTCT+AGG 0.431833 3_3:-37329121 Msa0450890:intron
GTTGGTGTTTCAAACTATAG+TGG 0.441212 3_3:-37329067 Msa0450890:intron
TGAAGAATTTAAAGGTGCAT+TGG 0.443008 3_3:-37326944 Msa0450890:CDS
AAACTACAGCCTCATTTATA+GGG 0.445249 3_3:-37328463 Msa0450890:CDS
AGTAAAAGCTGTTGCTTCAG+AGG 0.449040 3_3:-37330453 Msa0450890:CDS
GCATTCAATACAAGTATTGA+TGG 0.449691 3_3:-37329790 Msa0450890:CDS
GCTGCACTACCATGGAGATT+AGG 0.454709 3_3:-37329455 Msa0450890:CDS
GCGCGCTTAGAACACTTTCA+CGG 0.470958 3_3:+37329432 None:intergenic
CTTCAGGGACCCTATAAATG+AGG 0.477573 3_3:+37328454 None:intergenic
TTTACTTGATTTGAAGCCAA+TGG 0.478431 3_3:+37328483 None:intergenic
AAGTCATTTCGAGTCGATCA+AGG 0.479301 3_3:+37329399 None:intergenic
CCATTGAGAATGAAAATTGA+TGG 0.480703 3_3:+37330531 None:intergenic
TATTAAAGAACGAAAACAAA+AGG 0.484819 3_3:-37329513 Msa0450890:CDS
CATTCAATACAAGTATTGAT+GGG 0.489245 3_3:-37329789 Msa0450890:CDS
CAGCCGAAGTTTATGGCTCT+GGG 0.491385 3_3:-37329747 Msa0450890:CDS
ATTGGGTGGTTCTGATTTGA+AGG 0.491620 3_3:-37330393 Msa0450890:CDS
ATTACCAATTTCAGTGTCGA+TGG 0.492854 3_3:-37326534 Msa0450890:three_prime_UTR
AATTATCTTGTGGGTTAGGA+AGG 0.499853 3_3:-37326464 Msa0450890:three_prime_UTR
TTTACAAATGATTTAGGAGG+GGG 0.500903 3_3:+37326792 None:intergenic
AAGAAAACCTGTGATGAACT+TGG 0.503115 3_3:-37328420 Msa0450890:CDS
CAACAATTGGAATTGGAGCT+TGG 0.503149 3_3:-37330367 Msa0450890:CDS
TCACTATACATACAAGAATA+CGG 0.506190 3_3:+37326498 None:intergenic
GGCCCAGATGGAGGATTTCG+TGG 0.511209 3_3:+37327387 None:intergenic
AATTTAAAGGTGCATTGGGA+TGG 0.518745 3_3:-37326939 Msa0450890:CDS
AAAACTACATAATTATCTTG+TGG 0.519984 3_3:-37326474 Msa0450890:three_prime_UTR
GGAATTGGAGCTTGGTCTTG+GGG 0.521019 3_3:-37330359 Msa0450890:CDS
TCAGTGATCTTCTTCAGCAG+TGG 0.532128 3_3:+37327241 None:intergenic
AACTTTACAAATGATTTAGG+AGG 0.532241 3_3:+37326789 None:intergenic
GAAGATAAGTTGAAATTGGG+TGG 0.540548 3_3:-37330407 Msa0450890:CDS
ACTTTACAAATGATTTAGGA+GGG 0.540756 3_3:+37326790 None:intergenic
TTAGGTATCACTAAACTGGC+TGG 0.543245 3_3:-37327019 Msa0450890:intron
AAAGGACTTGTAAAGGCTGT+TGG 0.543851 3_3:-37329085 Msa0450890:CDS
GTAAAAGCTGTTGCTTCAGA+GGG 0.548941 3_3:-37330452 Msa0450890:CDS
TGTAATCCCAAGTTCATCAC+AGG 0.550263 3_3:+37328413 None:intergenic
CCTGGAATATGGGGAAATGA+AGG 0.551989 3_3:-37329266 Msa0450890:intron
GAATAAAGTGCTTATCTACA+TGG 0.557281 3_3:-37326678 Msa0450890:three_prime_UTR
GTACAATAAAACTTCTACAC+AGG 0.557929 3_3:-37327206 Msa0450890:intron
TTACCAATTTCAGTGTCGAT+GGG 0.559065 3_3:-37326533 Msa0450890:three_prime_UTR
CTAAACTGGCTGGTAGCTCA+AGG 0.571830 3_3:-37327009 Msa0450890:CDS
CATTGAGAATGAAAATTGAT+GGG 0.572653 3_3:+37330532 None:intergenic
CCAAGTTTGCTGCACTACCA+TGG 0.572726 3_3:-37329463 Msa0450890:CDS
ATATGCAATCTTGTGTAACA+AGG 0.576565 3_3:+37330649 None:intergenic
ATTCAGAAACTCTTCTAGGA+AGG 0.586726 3_3:-37329624 Msa0450890:intron
ATGGAAATTGACTAATGAAG+AGG 0.590977 3_3:-37326920 Msa0450890:CDS
ATTCTACCTCGAGGCCCAGA+TGG 0.592694 3_3:+37327375 None:intergenic
CTTTACAAATGATTTAGGAG+GGG 0.594574 3_3:+37326791 None:intergenic
CACCCCAGAGCCATAAACTT+CGG 0.595883 3_3:+37329744 None:intergenic
AGTCATTTCGAGTCGATCAA+GGG 0.598999 3_3:+37329400 None:intergenic
CAAGAAGAGAGGTATTCCAT+TGG 0.599396 3_3:-37328499 Msa0450890:CDS
CTACCTCGAGGCCCAGATGG+AGG 0.606001 3_3:+37327378 None:intergenic
CTCCACGAAATCCTCCATCT+GGG 0.608199 3_3:-37327389 Msa0450890:CDS
ATTCAATACAAGTATTGATG+GGG 0.611038 3_3:-37329788 Msa0450890:CDS
TACTCCAGAATTCCTAACAA+AGG 0.612031 3_3:-37327349 Msa0450890:intron
AGAAAACCTGTGATGAACTT+GGG 0.616494 3_3:-37328419 Msa0450890:CDS
CTTTCACGGCCTAATCTCCA+TGG 0.617396 3_3:+37329446 None:intergenic
GCATATTCACCAATAGCTCA+AGG 0.621156 3_3:-37328384 Msa0450890:intron
TCGACTCGAAATGACTTCTG+TGG 0.632893 3_3:-37329393 Msa0450890:CDS
TATGCACAGCTCAAGAAGAG+AGG 0.633807 3_3:-37328510 Msa0450890:CDS
TATGCAATCTTGTGTAACAA+GGG 0.660322 3_3:+37330650 None:intergenic
TTCAATACAAGTATTGATGG+GGG 0.677730 3_3:-37329787 Msa0450890:CDS
AATCCTCCATCTGGGCCTCG+AGG 0.680321 3_3:-37327381 Msa0450890:CDS
ATGGCTCTTCATATAAACAG+TGG 0.684583 3_3:-37330512 Msa0450890:CDS
AGTGATGAAGAAGTTGTATG+TGG 0.687872 3_3:+37330610 None:intergenic
GGAGTATAAATTCTACCTCG+AGG 0.694742 3_3:+37327366 None:intergenic
AGCCGAAGTTTATGGCTCTG+GGG 0.711177 3_3:-37329746 Msa0450890:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAGTTCAATTAATTAAAT+TGG + chr3_3:37327757-37327776 None:intergenic 10.0%
!! GTAATAATAATAATAATAAG+GGG - chr3_3:37328872-37328891 Msa0450890:intron 10.0%
!! AATTAATGTATTTAGTTATT+TGG - chr3_3:37328912-37328931 Msa0450890:intron 10.0%
!!! AAGTAAAAACAAATCAATTT+TGG - chr3_3:37326735-37326754 Msa0450890:three_prime_UTR 15.0%
!! ATTAATTAAATTGGTACATT+TGG + chr3_3:37327748-37327767 None:intergenic 15.0%
!! TTTCTGTTTAAATAGAAAAA+AGG + chr3_3:37328437-37328456 None:intergenic 15.0%
!! TTTAAAAAATTAGTTATGCA+GGG + chr3_3:37328744-37328763 None:intergenic 15.0%
!!! TTTTAAAAAATTAGTTATGC+AGG + chr3_3:37328745-37328764 None:intergenic 15.0%
!! TATAACTTTACAAATGATTT+AGG + chr3_3:37330201-37330220 None:intergenic 15.0%
!!! GTAATTTCATGTTATTTTAT+TGG + chr3_3:37330664-37330683 None:intergenic 15.0%
!! TTTCAAATTATTAACAGTGT+TGG + chr3_3:37326823-37326842 None:intergenic 20.0%
!!! CTTTCTAAGATATCAATTAT+AGG - chr3_3:37327006-37327025 Msa0450890:CDS 20.0%
!! GAACCATGATTAAATTTAAA+TGG + chr3_3:37327061-37327080 None:intergenic 20.0%
!! TATTAAAGAACGAAAACAAA+AGG - chr3_3:37327471-37327490 Msa0450890:intron 20.0%
!! TAAAAACAATATCAATCACT+AGG + chr3_3:37327653-37327672 None:intergenic 20.0%
!! AGTTAATTAGAGTTTAGATT+GGG - chr3_3:37328034-37328053 Msa0450890:intron 20.0%
!!! TGTACCATAATAATTTGTTA+TGG - chr3_3:37328373-37328392 Msa0450890:intron 20.0%
!! AGTACCATAACAAATTATTA+TGG + chr3_3:37328380-37328399 None:intergenic 20.0%
!! AAATAGAAAAAAGGAATGTT+AGG + chr3_3:37328428-37328447 None:intergenic 20.0%
!!! AGTATTTTTCTTTTAATACG+TGG + chr3_3:37328650-37328669 None:intergenic 20.0%
!! AAGGTAGGTATTTATAAAAA+GGG + chr3_3:37328681-37328700 None:intergenic 20.0%
!! AAAGGTAGGTATTTATAAAA+AGG + chr3_3:37328682-37328701 None:intergenic 20.0%
!! TTTATAAATACCTACCTTTA+AGG - chr3_3:37328683-37328702 Msa0450890:intron 20.0%
!! TAAGACATTATTAACATTAC+CGG + chr3_3:37328820-37328839 None:intergenic 20.0%
!! AGTTTAATTATAATCATGGA+GGG - chr3_3:37329251-37329270 Msa0450890:intron 20.0%
!! AAGTAATCATAAACTATTGT+CGG - chr3_3:37329289-37329308 Msa0450890:intron 20.0%
!!! TTTTTGTCTTAAAGAATTTG+AGG - chr3_3:37329342-37329361 Msa0450890:intron 20.0%
!!! TGATTTTGCATAAATTTTTG+CGG + chr3_3:37329541-37329560 None:intergenic 20.0%
!! ACAAAATAAATAAACACTTG+AGG + chr3_3:37329715-37329734 None:intergenic 20.0%
!!! CAAATTTTCAGTTTATATCA+TGG + chr3_3:37329823-37329842 None:intergenic 20.0%
!! AAATTGCATTCATAGTAAAT+TGG - chr3_3:37330241-37330260 Msa0450890:intron 20.0%
!! CTTAATGAAAAGAACAAAAA+TGG + chr3_3:37330339-37330358 None:intergenic 20.0%
!!! TTTTTGTTCTTTTCATTAAG+TGG - chr3_3:37330339-37330358 Msa0450890:CDS 20.0%
!! AAAACTACATAATTATCTTG+TGG - chr3_3:37330510-37330529 Msa0450890:CDS 20.0%
!! AAACTACATAATTATCTTGT+GGG - chr3_3:37330511-37330530 Msa0450890:CDS 20.0%
!! AGACAAAACTTTATTGAATT+AGG - chr3_3:37330588-37330607 Msa0450890:five_prime_UTR 20.0%
! CATTGAGAATGAAAATTGAT+GGG + chr3_3:37326455-37326474 None:intergenic 25.0%
!! AGTTGAAGATAAGTTGAAAT+TGG - chr3_3:37326573-37326592 Msa0450890:intron 25.0%
!! GTTGAAGATAAGTTGAAATT+GGG - chr3_3:37326574-37326593 Msa0450890:intron 25.0%
! TTCAGTGTAATTATAAGTGT+TGG - chr3_3:37326856-37326875 Msa0450890:CDS 25.0%
! TTTAAGAGAAAAGGCAAATT+TGG - chr3_3:37327034-37327053 Msa0450890:intron 25.0%
! GGACCATTTAAATTTAATCA+TGG - chr3_3:37327055-37327074 Msa0450890:intron 25.0%
!! CATTTTCTAATTTCTACTCA+AGG - chr3_3:37327095-37327114 Msa0450890:intron 25.0%
!! CCTATCTAAAATTACCATAA+GGG + chr3_3:37327153-37327172 None:intergenic 25.0%
!! TCCTATCTAAAATTACCATA+AGG + chr3_3:37327154-37327173 None:intergenic 25.0%
!!! CATTCAATACAAGTATTGAT+GGG - chr3_3:37327195-37327214 Msa0450890:intron 25.0%
!!! ATTCAATACAAGTATTGATG+GGG - chr3_3:37327196-37327215 Msa0450890:intron 25.0%
! TAGAAGAGTTTCTGAATTTA+CGG + chr3_3:37327357-37327376 None:intergenic 25.0%
! AGACTCTCAATATAATGTAT+CGG + chr3_3:37327974-37327993 None:intergenic 25.0%
! GAGTTAATTAGAGTTTAGAT+TGG - chr3_3:37328033-37328052 Msa0450890:intron 25.0%
!! AAGTTTTCTTCTCATTCTTA+AGG - chr3_3:37328151-37328170 Msa0450890:intron 25.0%
!! CTATTTTCTCAAACTACTAT+TGG - chr3_3:37328244-37328263 Msa0450890:intron 25.0%
! GTATTTATAAAAAGGGATAG+AGG + chr3_3:37328674-37328693 None:intergenic 25.0%
! AGCAATATTCTAGATATTTC+CGG - chr3_3:37328798-37328817 Msa0450890:intron 25.0%
! GTTACTAAATATAACTACCA+TGG - chr3_3:37329031-37329050 Msa0450890:intron 25.0%
! TACCATGGTTAATATATATC+TGG - chr3_3:37329046-37329065 Msa0450890:intron 25.0%
! AATTAGTTGATTGTCAGATA+CGG - chr3_3:37329220-37329239 Msa0450890:intron 25.0%
! TCGGAGTTTAATTATAATCA+TGG - chr3_3:37329247-37329266 Msa0450890:intron 25.0%
! GAGTTTAATTATAATCATGG+AGG - chr3_3:37329250-37329269 Msa0450890:intron 25.0%
!! TGTTTTGTAGTGTATAAACT+CGG + chr3_3:37329403-37329422 None:intergenic 25.0%
! ACAAGTATCATTTGAAAACA+AGG + chr3_3:37329913-37329932 None:intergenic 25.0%
!!! AAGAATCAGTTTGTTTTCAA+GGG + chr3_3:37329943-37329962 None:intergenic 25.0%
!!! AAAGAATCAGTTTGTTTTCA+AGG + chr3_3:37329944-37329963 None:intergenic 25.0%
!! AAACAAACTGATTCTTTGTT+AGG - chr3_3:37329947-37329966 Msa0450890:intron 25.0%
! ACTTTACAAATGATTTAGGA+GGG + chr3_3:37330197-37330216 None:intergenic 25.0%
! AACTTTACAAATGATTTAGG+AGG + chr3_3:37330198-37330217 None:intergenic 25.0%
! TCACTATACATACAAGAATA+CGG + chr3_3:37330489-37330508 None:intergenic 25.0%
TATGCAATCTTGTGTAACAA+GGG + chr3_3:37326337-37326356 None:intergenic 30.0%
ATATGCAATCTTGTGTAACA+AGG + chr3_3:37326338-37326357 None:intergenic 30.0%
CCATTGAGAATGAAAATTGA+TGG + chr3_3:37326456-37326475 None:intergenic 30.0%
! CCATCAATTTTCATTCTCAA+TGG - chr3_3:37326453-37326472 Msa0450890:three_prime_UTR 30.0%
! CTTACTGGAACAATTTTCAA+TGG - chr3_3:37326656-37326675 Msa0450890:three_prime_UTR 30.0%
! TGGAACAATTTTCAATGGAA+TGG - chr3_3:37326661-37326680 Msa0450890:three_prime_UTR 30.0%
TATGTGCAATGCAACTTATA+AGG + chr3_3:37326713-37326732 None:intergenic 30.0%
! TAGAAATTCCTACCTTTTGA+TGG - chr3_3:37326949-37326968 Msa0450890:CDS 30.0%
! AGAAATTCCTACCTTTTGAT+GGG - chr3_3:37326950-37326969 Msa0450890:CDS 30.0%
!! TAGGTAGCTTTTAAGAGAAA+AGG - chr3_3:37327025-37327044 Msa0450890:intron 30.0%
! CCCTTATGGTAATTTTAGAT+AGG - chr3_3:37327150-37327169 Msa0450890:intron 30.0%
!! GCATTCAATACAAGTATTGA+TGG - chr3_3:37327194-37327213 Msa0450890:intron 30.0%
!! TTCAATACAAGTATTGATGG+GGG - chr3_3:37327197-37327216 Msa0450890:intron 30.0%
!!! CTCTTTTTTAAGCTTGCTTT+CGG - chr3_3:37327329-37327348 Msa0450890:intron 30.0%
GTAAATTCAGAAACTCTTCT+AGG - chr3_3:37327356-37327375 Msa0450890:CDS 30.0%
! GAAGGTAAAGCTTACATTTT+TGG - chr3_3:37327378-37327397 Msa0450890:CDS 30.0%
GCATTTGCAGTTATTAATCA+AGG - chr3_3:37327409-37327428 Msa0450890:CDS 30.0%
!! TCACCAATGAATTGTTTTTC+AGG - chr3_3:37327845-37327864 Msa0450890:intron 30.0%
!! CACCAATGAATTGTTTTTCA+GGG - chr3_3:37327846-37327865 Msa0450890:intron 30.0%
TACCCTGAAAAACAATTCAT+TGG + chr3_3:37327851-37327870 None:intergenic 30.0%
!!! TGTTTTTCAGGGTATATTGA+TGG - chr3_3:37327857-37327876 Msa0450890:intron 30.0%
TGTTCAAAAAGGACTTGTAA+AGG - chr3_3:37327892-37327911 Msa0450890:intron 30.0%
TACACAACAGGTAATAATCA+TGG + chr3_3:37327948-37327967 None:intergenic 30.0%
! TTTACTTGATTTGAAGCCAA+TGG + chr3_3:37328504-37328523 None:intergenic 30.0%
TAAACTACAGCCTCATTTAT+AGG - chr3_3:37328520-37328539 Msa0450890:CDS 30.0%
AAACTACAGCCTCATTTATA+GGG - chr3_3:37328521-37328540 Msa0450890:CDS 30.0%
!!! CGTGGTTTTGAATAGTAAAA+AGG + chr3_3:37328632-37328651 None:intergenic 30.0%
!! TACCTTTAAGGTGAATAAGT+GGG - chr3_3:37328695-37328714 Msa0450890:intron 30.0%
TGGAAGATTGCTTATATTTC+AGG - chr3_3:37328932-37328951 Msa0450890:intron 30.0%
GGAAGATTGCTTATATTTCA+GGG - chr3_3:37328933-37328952 Msa0450890:intron 30.0%
AGTAACAAATCTCAGTGTTA+TGG + chr3_3:37329017-37329036 None:intergenic 30.0%
GACCAGATATATATTAACCA+TGG + chr3_3:37329051-37329070 None:intergenic 30.0%
CATACGCACTTGATATTTAA+TGG - chr3_3:37329089-37329108 Msa0450890:CDS 30.0%
CATTAGCACTTGATACTTAA+TGG - chr3_3:37329115-37329134 Msa0450890:CDS 30.0%
TACTACAAAAACCTGGAAAA+TGG + chr3_3:37329156-37329175 None:intergenic 30.0%
! TCCAGGTTTTTGTAGTATTT+AGG - chr3_3:37329159-37329178 Msa0450890:intron 30.0%
ACCTAAATACTACAAAAACC+TGG + chr3_3:37329163-37329182 None:intergenic 30.0%
ATTAGTTGATTGTCAGATAC+GGG - chr3_3:37329221-37329240 Msa0450890:intron 30.0%
!! TAAACTATTGTCGGTTTGTT+TGG - chr3_3:37329298-37329317 Msa0450890:intron 30.0%
!! AAACTATTGTCGGTTTGTTT+GGG - chr3_3:37329299-37329318 Msa0450890:intron 30.0%
GCAAAATCATTATCTTAAGC+AGG - chr3_3:37329552-37329571 Msa0450890:intron 30.0%
AGAAAAGTTGTACCTTTGTT+AGG + chr3_3:37329650-37329669 None:intergenic 30.0%
TGAATTATACCGATAGTACT+TGG - chr3_3:37329687-37329706 Msa0450890:intron 30.0%
GTACAATAAAACTTCTACAC+AGG - chr3_3:37329778-37329797 Msa0450890:CDS 30.0%
GTTCACTATATTGTTAAAGC+AGG + chr3_3:37329872-37329891 None:intergenic 30.0%
TTTGTTAGGTATCACTAAAC+TGG - chr3_3:37329961-37329980 Msa0450890:intron 30.0%
GAACAAGCTGAAGAATTTAA+AGG - chr3_3:37330032-37330051 Msa0450890:intron 30.0%
! TGAAGAATTTAAAGGTGCAT+TGG - chr3_3:37330040-37330059 Msa0450890:intron 30.0%
! GAAGAATTTAAAGGTGCATT+GGG - chr3_3:37330041-37330060 Msa0450890:intron 30.0%
ATGGAAATTGACTAATGAAG+AGG - chr3_3:37330064-37330083 Msa0450890:intron 30.0%
TCGAAAATTAAGCCTGTTAT+TGG - chr3_3:37330110-37330129 Msa0450890:intron 30.0%
!! ATGTTTCAGAGTTTTTCAAC+TGG + chr3_3:37330140-37330159 None:intergenic 30.0%
!! AGTTGAAAAACTCTGAAACA+TGG - chr3_3:37330139-37330158 Msa0450890:intron 30.0%
TTTACAAATGATTTAGGAGG+GGG + chr3_3:37330195-37330214 None:intergenic 30.0%
CTTTACAAATGATTTAGGAG+GGG + chr3_3:37330196-37330215 None:intergenic 30.0%
! GAATAAAGTGCTTATCTACA+TGG - chr3_3:37330306-37330325 Msa0450890:intron 30.0%
CTTCTGATTAAAGATGTGAT+CGG - chr3_3:37330405-37330424 Msa0450890:CDS 30.0%
ACATAATTATCTTGTGGGTT+AGG - chr3_3:37330516-37330535 Msa0450890:exon 30.0%
!! AAGTTTTGTCTGCATATCAT+TGG + chr3_3:37330579-37330598 None:intergenic 30.0%
AGTGATGAAGAAGTTGTATG+TGG + chr3_3:37326377-37326396 None:intergenic 35.0%
ATGGCTCTTCATATAAACAG+TGG - chr3_3:37326472-37326491 Msa0450890:three_prime_UTR 35.0%
!! AGTGGTTGTTTTACTGTGAT+GGG - chr3_3:37326490-37326509 Msa0450890:three_prime_UTR 35.0%
! GAAGATAAGTTGAAATTGGG+TGG - chr3_3:37326577-37326596 Msa0450890:intron 35.0%
!! GATTTGAAGGTGTCAACAAT+TGG - chr3_3:37326604-37326623 Msa0450890:intron 35.0%
! AAGGTGTCAACAATTGGAAT+TGG - chr3_3:37326610-37326629 Msa0450890:intron 35.0%
!! TATAAGTGTTGGTGTAGTGT+CGG - chr3_3:37326867-37326886 Msa0450890:CDS 35.0%
TATGAATCATGGACACTCAT+CGG + chr3_3:37326923-37326942 None:intergenic 35.0%
TTCTACACAGCTATGAATCA+TGG + chr3_3:37326934-37326953 None:intergenic 35.0%
AACTTCCTTATCCCATCAAA+AGG + chr3_3:37326964-37326983 None:intergenic 35.0%
TCATCAATCTACTTCCCTTA+TGG - chr3_3:37327136-37327155 Msa0450890:intron 35.0%
! ATTCAGAAACTCTTCTAGGA+AGG - chr3_3:37327360-37327379 Msa0450890:CDS 35.0%
GCAACTTCAACTTCAACATT+TGG + chr3_3:37327499-37327518 None:intergenic 35.0%
! GTTGGTGTTTCAAACTATAG+TGG - chr3_3:37327917-37327936 Msa0450890:intron 35.0%
TATTGAGAGTCTTACGAGAT+AGG - chr3_3:37327982-37328001 Msa0450890:intron 35.0%
TTACGAGATAGGATTCAGTT+AGG - chr3_3:37327993-37328012 Msa0450890:intron 35.0%
TTAGAGTTTAGATTGGGAGT+TGG - chr3_3:37328040-37328059 Msa0450890:intron 35.0%
TCTCAAACTACTATTGGTGT+CGG - chr3_3:37328250-37328269 Msa0450890:intron 35.0%
! TCTTCACACCATTTTCTTCA+GGG + chr3_3:37328548-37328567 None:intergenic 35.0%
! TTCTTCACACCATTTTCTTC+AGG + chr3_3:37328549-37328568 None:intergenic 35.0%
AAGAAAACCTGTGATGAACT+TGG - chr3_3:37328564-37328583 Msa0450890:intron 35.0%
AGAAAACCTGTGATGAACTT+GGG - chr3_3:37328565-37328584 Msa0450890:intron 35.0%
CACTTATTCACCTTAAAGGT+AGG + chr3_3:37328696-37328715 None:intergenic 35.0%
!! CTACCTTTAAGGTGAATAAG+TGG - chr3_3:37328694-37328713 Msa0450890:intron 35.0%
AACCCACTTATTCACCTTAA+AGG + chr3_3:37328700-37328719 None:intergenic 35.0%
AATTAGTTATGCAGGGTATG+AGG + chr3_3:37328737-37328756 None:intergenic 35.0%
AGGGACTTATAATTAGAGAC+AGG - chr3_3:37328978-37328997 Msa0450890:intron 35.0%
TATCAAGTGCGTATGTTTCA+TGG + chr3_3:37329084-37329103 None:intergenic 35.0%
! TTGTTTGGGAGAGTTTTTGT+AGG - chr3_3:37329313-37329332 Msa0450890:intron 35.0%
! TGTTTGGGAGAGTTTTTGTA+GGG - chr3_3:37329314-37329333 Msa0450890:intron 35.0%
ATGGAGTTGGAATTCGTTAT+GGG + chr3_3:37329486-37329505 None:intergenic 35.0%
AATGGAGTTGGAATTCGTTA+TGG + chr3_3:37329487-37329506 None:intergenic 35.0%
ACAACTTTCATGAATGGAGT+TGG + chr3_3:37329499-37329518 None:intergenic 35.0%
GTATGCACAACTTTCATGAA+TGG + chr3_3:37329505-37329524 None:intergenic 35.0%
TACTCCAGAATTCCTAACAA+AGG - chr3_3:37329635-37329654 Msa0450890:CDS 35.0%
TGTACCTTTGTTAGGAATTC+TGG + chr3_3:37329642-37329661 None:intergenic 35.0%
CTGAAGAAGATCACTGAAAT+AGG - chr3_3:37329749-37329768 Msa0450890:CDS 35.0%
! AATTTAAAGGTGCATTGGGA+TGG - chr3_3:37330045-37330064 Msa0450890:intron 35.0%
! ATTACCAATTTCAGTGTCGA+TGG - chr3_3:37330450-37330469 Msa0450890:CDS 35.0%
!! TTACCAATTTCAGTGTCGAT+GGG - chr3_3:37330451-37330470 Msa0450890:CDS 35.0%
!! AATTATCTTGTGGGTTAGGA+AGG - chr3_3:37330520-37330539 Msa0450890:exon 35.0%
!! CAGTGGTTGTTTTACTGTGA+TGG - chr3_3:37326489-37326508 Msa0450890:three_prime_UTR 40.0%
! AGTAAAAGCTGTTGCTTCAG+AGG - chr3_3:37326531-37326550 Msa0450890:three_prime_UTR 40.0%
! GTAAAAGCTGTTGCTTCAGA+GGG - chr3_3:37326532-37326551 Msa0450890:three_prime_UTR 40.0%
!! ATTGGGTGGTTCTGATTTGA+AGG - chr3_3:37326591-37326610 Msa0450890:intron 40.0%
CAACAATTGGAATTGGAGCT+TGG - chr3_3:37326617-37326636 Msa0450890:intron 40.0%
! TCCTACCTTTTGATGGGATA+AGG - chr3_3:37326956-37326975 Msa0450890:CDS 40.0%
TCCTTATCCCATCAAAAGGT+AGG + chr3_3:37326960-37326979 None:intergenic 40.0%
! AGTCATTTCGAGTCGATCAA+GGG + chr3_3:37327587-37327606 None:intergenic 40.0%
! AAGTCATTTCGAGTCGATCA+AGG + chr3_3:37327588-37327607 None:intergenic 40.0%
TGGATCTGTATCAGCTTCAT+TGG - chr3_3:37327611-37327630 Msa0450890:intron 40.0%
!! AAGTAACGCGCTTGTTTTTC+AGG - chr3_3:37327695-37327714 Msa0450890:intron 40.0%
!!! TGTTTTTCAGGCCTGGAATA+TGG - chr3_3:37327707-37327726 Msa0450890:intron 40.0%
!!! GTTTTTCAGGCCTGGAATAT+GGG - chr3_3:37327708-37327727 Msa0450890:intron 40.0%
!!! TTTTTCAGGCCTGGAATATG+GGG - chr3_3:37327709-37327728 Msa0450890:intron 40.0%
! TCAGGGTATATTGATGGTCT+AGG - chr3_3:37327863-37327882 Msa0450890:intron 40.0%
CTAGGTGATGCTGTTCAAAA+AGG - chr3_3:37327881-37327900 Msa0450890:intron 40.0%
AAAGGACTTGTAAAGGCTGT+TGG - chr3_3:37327899-37327918 Msa0450890:intron 40.0%
! ATGTATCGGTACTACACAAC+AGG + chr3_3:37327960-37327979 None:intergenic 40.0%
ATGCCTTATCTCGGTAAACT+GGG + chr3_3:37328179-37328198 None:intergenic 40.0%
AATGCCTTATCTCGGTAAAC+TGG + chr3_3:37328180-37328199 None:intergenic 40.0%
AATCACAAGTGTTTGTGCGT+CGG + chr3_3:37328212-37328231 None:intergenic 40.0%
GGTTCATAGATCATCTGTCT+TGG - chr3_3:37328309-37328328 Msa0450890:intron 40.0%
!! CAAGAAGAGAGGTATTCCAT+TGG - chr3_3:37328485-37328504 Msa0450890:CDS 40.0%
TATAGGGTCCCTGAAGAAAA+TGG - chr3_3:37328537-37328556 Msa0450890:intron 40.0%
TGTAATCCCAAGTTCATCAC+AGG + chr3_3:37328574-37328593 None:intergenic 40.0%
GCATATTCACCAATAGCTCA+AGG - chr3_3:37328600-37328619 Msa0450890:intron 40.0%
AGGATTTCACCTTGAGCTAT+TGG + chr3_3:37328612-37328631 None:intergenic 40.0%
!! AGGTGAATAAGTGGGTTGTT+CGG - chr3_3:37328703-37328722 Msa0450890:intron 40.0%
! CGATTGAGAATCCATTTTCC+AGG - chr3_3:37329142-37329161 Msa0450890:intron 40.0%
GATTGTCAGATACGGGAATT+CGG - chr3_3:37329228-37329247 Msa0450890:intron 40.0%
! GTTTGGGAGAGTTTTTGTAG+GGG - chr3_3:37329315-37329334 Msa0450890:intron 40.0%
GGAATTCGTTATGGGCATAT+GGG + chr3_3:37329478-37329497 None:intergenic 40.0%
TGGAATTCGTTATGGGCATA+TGG + chr3_3:37329479-37329498 None:intergenic 40.0%
TCTTAAGCAGGTGTTCTTAC+TGG - chr3_3:37329564-37329583 Msa0450890:intron 40.0%
GGAGTATAAATTCTACCTCG+AGG + chr3_3:37329621-37329640 None:intergenic 40.0%
CTTGAGGAACCAAGTACTAT+CGG + chr3_3:37329699-37329718 None:intergenic 40.0%
TTAGGTATCACTAAACTGGC+TGG - chr3_3:37329965-37329984 Msa0450890:intron 40.0%
GGAAATGTTGTACCAATTCC+TGG - chr3_3:37329996-37330015 Msa0450890:intron 40.0%
TCAACTGGAAAGCCAATAAC+AGG + chr3_3:37330125-37330144 None:intergenic 40.0%
! CTTTTGCATTCGTGGTTGAA+AGG + chr3_3:37330635-37330654 None:intergenic 40.0%
TTGGAATTGGAGCTTGGTCT+TGG - chr3_3:37326623-37326642 Msa0450890:intron 45.0%
! TGGAATTGGAGCTTGGTCTT+GGG - chr3_3:37326624-37326643 Msa0450890:intron 45.0%
CTTGGGGTGATACTACTTAC+TGG - chr3_3:37326641-37326660 Msa0450890:intron 45.0%
TACTGTGTAGCTATGAAGCG+CGG - chr3_3:37326769-37326788 Msa0450890:three_prime_UTR 45.0%
! TCATCGGATTAGACGTGTTC+TGG + chr3_3:37326907-37326926 None:intergenic 45.0%
! AACTTCGGCTGTGTCGATAA+AGG + chr3_3:37327228-37327247 None:intergenic 45.0%
ATCGACACAGCCGAAGTTTA+TGG - chr3_3:37327230-37327249 Msa0450890:CDS 45.0%
! TCGACTCGAAATGACTTCTG+TGG - chr3_3:37327591-37327610 Msa0450890:intron 45.0%
CCTTCATTTCCCCATATTCC+AGG + chr3_3:37327721-37327740 None:intergenic 45.0%
CCTGGAATATGGGGAAATGA+AGG - chr3_3:37327718-37327737 Msa0450890:intron 45.0%
GTTCCCAGTTTACCGAGATA+AGG - chr3_3:37328173-37328192 Msa0450890:intron 45.0%
CACTCGGAAATGCCTTATCT+CGG + chr3_3:37328188-37328207 None:intergenic 45.0%
CACCAACAAATCACTGACAC+CGG + chr3_3:37328290-37328309 None:intergenic 45.0%
TATGCACAGCTCAAGAAGAG+AGG - chr3_3:37328474-37328493 Msa0450890:CDS 45.0%
CTTCAGGGACCCTATAAATG+AGG + chr3_3:37328533-37328552 None:intergenic 45.0%
!! GGTGAATAAGTGGGTTGTTC+GGG - chr3_3:37328704-37328723 Msa0450890:intron 45.0%
!! GTGAATAAGTGGGTTGTTCG+GGG - chr3_3:37328705-37328724 Msa0450890:intron 45.0%
GTGCGTATGTTTCATGGAAG+AGG + chr3_3:37329078-37329097 None:intergenic 45.0%
TCAGTGATCTTCTTCAGCAG+TGG + chr3_3:37329746-37329765 None:intergenic 45.0%
!!! GCTGTTTTAGCACCAGGAAT+TGG + chr3_3:37330011-37330030 None:intergenic 45.0%
!!! TGTTCTGCTGTTTTAGCACC+AGG + chr3_3:37330017-37330036 None:intergenic 45.0%
TGACCCATCGACACTGAAAT+TGG + chr3_3:37330457-37330476 None:intergenic 45.0%
! GGAAGCAACTTTTGCATTCG+TGG + chr3_3:37330643-37330662 None:intergenic 45.0%
!!! TTATTATTTTTTTAGAAAAT+AGG + chr3_3:37326423-37326442 None:intergenic 5.0%
!! TAATTATTTAATATAGTAAA+TGG - chr3_3:37327773-37327792 Msa0450890:intron 5.0%
!! TAGTAATAATAATAATAATA+AGG - chr3_3:37328870-37328889 Msa0450890:intron 5.0%
!! AGTAATAATAATAATAATAA+GGG - chr3_3:37328871-37328890 Msa0450890:intron 5.0%
!!! TTTTTTTTTTTTTTTTTGAA+AGG - chr3_3:37328958-37328977 Msa0450890:intron 5.0%
!!! TTTTTTTTTTTTTTTTGAAA+GGG - chr3_3:37328959-37328978 Msa0450890:intron 5.0%
!! GGAATTGGAGCTTGGTCTTG+GGG - chr3_3:37326625-37326644 Msa0450890:intron 50.0%
GTAGCTATGAAGCGCGGATA+CGG - chr3_3:37326775-37326794 Msa0450890:three_prime_UTR 50.0%
ACAGCCGAAGTTTATGGCTC+TGG - chr3_3:37327236-37327255 Msa0450890:CDS 50.0%
CAGCCGAAGTTTATGGCTCT+GGG - chr3_3:37327237-37327256 Msa0450890:CDS 50.0%
! AGCCGAAGTTTATGGCTCTG+GGG - chr3_3:37327238-37327257 Msa0450890:CDS 50.0%
CACCCCAGAGCCATAAACTT+CGG + chr3_3:37327243-37327262 None:intergenic 50.0%
! CCATGGTAGTGCAGCAAACT+TGG + chr3_3:37327524-37327543 None:intergenic 50.0%
!! CCAAGTTTGCTGCACTACCA+TGG - chr3_3:37327521-37327540 Msa0450890:intron 50.0%
GCTGCACTACCATGGAGATT+AGG - chr3_3:37327529-37327548 Msa0450890:intron 50.0%
CTTTCACGGCCTAATCTCCA+TGG + chr3_3:37327541-37327560 None:intergenic 50.0%
GCGCGCTTAGAACACTTTCA+CGG + chr3_3:37327555-37327574 None:intergenic 50.0%
! GTCCGGTGTCAGTGATTTGT+TGG - chr3_3:37328285-37328304 Msa0450890:intron 50.0%
!! CGGTGTCAGTGATTTGTTGG+TGG - chr3_3:37328288-37328307 Msa0450890:intron 50.0%
! TGGGAGAGTTTTTGTAGGGG+AGG - chr3_3:37329318-37329337 Msa0450890:intron 50.0%
! GGGAGAGTTTTTGTAGGGGA+GGG - chr3_3:37329319-37329338 Msa0450890:intron 50.0%
ACTCCACGAAATCCTCCATC+TGG - chr3_3:37329594-37329613 Msa0450890:intron 50.0%
CTCCACGAAATCCTCCATCT+GGG - chr3_3:37329595-37329614 Msa0450890:intron 50.0%
CTAAACTGGCTGGTAGCTCA+AGG - chr3_3:37329975-37329994 Msa0450890:intron 50.0%
GGTAGCTGAGCTACGAAGTT+TGG - chr3_3:37330085-37330104 Msa0450890:intron 50.0%
!! GTGTAGTGTCGGTGTCAGAC+AGG - chr3_3:37326878-37326897 Msa0450890:CDS 55.0%
!!! ACGCGCTTGTTTTTCAGGCC+TGG - chr3_3:37327700-37327719 Msa0450890:intron 55.0%
GTGTTTGTGCGTCGGACACT+CGG + chr3_3:37328204-37328223 None:intergenic 55.0%
!! GTCGGTGTCATTGTCGTGTC+CGG - chr3_3:37328268-37328287 Msa0450890:intron 55.0%
ATTCTACCTCGAGGCCCAGA+TGG + chr3_3:37329612-37329631 None:intergenic 55.0%
GGCCCAGATGGAGGATTTCG+TGG + chr3_3:37329600-37329619 None:intergenic 60.0%
AATCCTCCATCTGGGCCTCG+AGG - chr3_3:37329603-37329622 Msa0450890:intron 60.0%
CTACCTCGAGGCCCAGATGG+AGG + chr3_3:37329609-37329628 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 37326323 37330683 37326323 ID=Msa0450890;Name=Msa0450890
chr3_3 mRNA 37326323 37330683 37326323 ID=Msa0450890-mRNA-1;Parent=Msa0450890;Name=Msa0450890-mRNA-1;_AED=0.07;_eAED=0.07;_QI=149|1|1|1|0.9|0.81|11|459|367
chr3_3 exon 37326323 37326582 37326323 ID=Msa0450890-mRNA-1:exon:6785;Parent=Msa0450890-mRNA-1
chr3_3 exon 37326653 37327037 37326653 ID=Msa0450890-mRNA-1:exon:6784;Parent=Msa0450890-mRNA-1
chr3_3 exon 37327207 37327269 37327207 ID=Msa0450890-mRNA-1:exon:6783;Parent=Msa0450890-mRNA-1
chr3_3 exon 37327350 37327432 37327350 ID=Msa0450890-mRNA-1:exon:6782;Parent=Msa0450890-mRNA-1
chr3_3 exon 37328385 37328552 37328385 ID=Msa0450890-mRNA-1:exon:6781;Parent=Msa0450890-mRNA-1
chr3_3 exon 37329068 37329139 37329068 ID=Msa0450890-mRNA-1:exon:6780;Parent=Msa0450890-mRNA-1
chr3_3 exon 37329267 37329289 37329267 ID=Msa0450890-mRNA-1:exon:6779;Parent=Msa0450890-mRNA-1
chr3_3 exon 37329374 37329538 37329374 ID=Msa0450890-mRNA-1:exon:6778;Parent=Msa0450890-mRNA-1
chr3_3 exon 37329625 37329665 37329625 ID=Msa0450890-mRNA-1:exon:6777;Parent=Msa0450890-mRNA-1
chr3_3 exon 37329747 37329838 37329747 ID=Msa0450890-mRNA-1:exon:6776;Parent=Msa0450890-mRNA-1
chr3_3 exon 37330324 37330683 37330324 ID=Msa0450890-mRNA-1:exon:6775;Parent=Msa0450890-mRNA-1
chr3_3 five_prime_UTR 37330535 37330683 37330535 ID=Msa0450890-mRNA-1:five_prime_utr;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37330324 37330534 37330324 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37329747 37329838 37329747 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37329625 37329665 37329625 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37329374 37329538 37329374 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37329267 37329289 37329267 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37329068 37329139 37329068 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37328385 37328552 37328385 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37327350 37327432 37327350 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37327207 37327269 37327207 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 CDS 37326852 37327037 37326852 ID=Msa0450890-mRNA-1:cds;Parent=Msa0450890-mRNA-1
chr3_3 three_prime_UTR 37326653 37326851 37326653 ID=Msa0450890-mRNA-1:three_prime_utr;Parent=Msa0450890-mRNA-1
chr3_3 three_prime_UTR 37326323 37326582 37326323 ID=Msa0450890-mRNA-1:three_prime_utr;Parent=Msa0450890-mRNA-1
Gene Sequence

>Msa0450890

ATGGCTCTTCATATAAACAGTGGTTGTTTTACTGTGATGGGTCACTGTAGAGTTCAAAGAGTAAAAGCTGTTGCTTCAGAGGGTTCTTCTGCTAATGTTACAGTTGAAGATAAGTTGAAATTGGGTGGTTCTGATTTGAAGGTGTCAACAATTGGAATTGGAGCTTGGTCTTGGGGTGATACTACTTACTGGAACAATTTTCAATGGAATGATAGGAATGAGAAAGCTGCTAGAGATGCATTCAATACAAGTATTGATGGGGGTCTAACCTTTATCGACACAGCCGAAGTTTATGGCTCTGGGCTTGCTTTCGGAGCCGTAAATTCAGAAACTCTTCTAGGAAGATTTATTAAAGAACGAAAACAAAAGGATCCAAATGTTGAAGTTGAAGTTGCTACCAAGTTTGCTGCACTACCATGGAGATTAGGCCGTGAAAGTGTTCTAAGCGCGCTTAAAGATTCCCTTGATCGACTCGAAATGACTTCTGTGGATCTGTATCAGCTTCATTGGCCTGGAATATGGGGAAATGAAGGGTATATTGATGGTCTAGGTGATGCTGTTCAAAAAGGACTTGTAAAGGCTGTTGGTGTTTCAAACTATAGTGAAAAACGACTACGCGAAGCATATGCACAGCTCAAGAAGAGAGGTATTCCATTGGCTTCAAATCAAGTAAACTACAGCCTCATTTATAGGGTCCCTGAAGAAAATGGTGTGAAGAAAACCTGTGATGAACTTGGGATTACATTGATTGCATATTCACCAATAGCTCAAGGTGTTCTTACTGGAAAGTATACTCCACGAAATCCTCCATCTGGGCCTCGAGGTAGAATTTATACTCCAGAATTCCTAACAAAGCTTCAACCACTGCTGAAGAAGATCACTGAAATAGGAGAGAAGTACAATAAAACTTCTACACAGGTATCACTAAACTGGCTGGTAGCTCAAGGAAATGTTGTACCAATTCCTGGTGCTAAAACAGCAGAACAAGCTGAAGAATTTAAAGGTGCATTGGGATGGAAATTGACTAATGAAGAGGTAGCTGAGCTACGAAGTTTGGCGTCGAAAATTAAGCCTGTTATTGGCTTTCCAGTTGAAAAACTCTGA

Protein sequence

>Msa0450890

MALHINSGCFTVMGHCRVQRVKAVASEGSSANVTVEDKLKLGGSDLKVSTIGIGAWSWGDTTYWNNFQWNDRNEKAARDAFNTSIDGGLTFIDTAEVYGSGLAFGAVNSETLLGRFIKERKQKDPNVEVEVATKFAALPWRLGRESVLSALKDSLDRLEMTSVDLYQLHWPGIWGNEGYIDGLGDAVQKGLVKAVGVSNYSEKRLREAYAQLKKRGIPLASNQVNYSLIYRVPEENGVKKTCDELGITLIAYSPIAQGVLTGKYTPRNPPSGPRGRIYTPEFLTKLQPLLKKITEIGEKYNKTSTQVSLNWLVAQGNVVPIPGAKTAEQAEEFKGALGWKLTNEEVAELRSLASKIKPVIGFPVEKL*