AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0702560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0702560 MtrunA17_Chr8g0380531 96.087 460 18 0 1 460 1 460 0.0 898
Msa0702560 MtrunA17_Chr6g0464881 48.796 457 228 3 2 457 3 454 3.51e-160 461
Msa0702560 MtrunA17_Chr6g0464841 48.584 459 230 3 2 459 3 456 1.10e-159 459
Msa0702560 MtrunA17_Chr6g0464871 48.366 459 231 3 2 459 15 468 2.43e-156 451
Msa0702560 MtrunA17_Chr6g0464861 48.253 458 230 3 3 459 4 455 9.89e-156 449
Msa0702560 MtrunA17_Chr5g0414331 46.272 456 236 3 6 460 9 456 5.29e-151 437
Msa0702560 MtrunA17_Chr6g0464921 47.277 459 236 4 1 457 1 455 1.35e-150 436
Msa0702560 MtrunA17_Chr7g0250001 45.796 452 237 3 7 457 3 447 7.40e-148 429
Msa0702560 MtrunA17_Chr5g0414321 45.770 461 235 5 1 457 2 451 9.64e-148 429
Msa0702560 MtrunA17_Chr7g0249981 46.358 453 235 3 6 457 21 466 5.61e-147 428
Msa0702560 MtrunA17_Chr7g0249931 44.737 456 240 7 6 457 36 483 2.24e-132 391
Msa0702560 MtrunA17_Chr8g0377921 40.987 466 247 15 10 455 4 461 5.03e-105 320
Msa0702560 MtrunA17_Chr3g0121991 38.947 475 255 13 10 457 79 545 2.11e-101 313
Msa0702560 MtrunA17_Chr3g0098111 37.395 476 263 12 7 458 6 470 5.49e-100 308
Msa0702560 MtrunA17_Chr4g0053501 36.674 469 271 9 5 457 6 464 5.59e-99 305
Msa0702560 MtrunA17_Chr1g0207981 37.259 467 269 8 9 457 12 472 9.18e-99 304
Msa0702560 MtrunA17_Chr8g0377941 38.559 472 249 13 10 457 7 461 1.01e-95 296
Msa0702560 MtrunA17_Chr1g0207861 36.421 475 269 11 7 458 5 469 6.30e-95 295
Msa0702560 MtrunA17_Chr3g0122001 38.136 472 263 11 10 457 486 952 4.84e-94 304
Msa0702560 MtrunA17_Chr3g0122001 38.055 473 263 13 10 457 6 473 1.31e-92 300
Msa0702560 MtrunA17_Chr4g0053321 35.837 466 273 9 8 457 24 479 3.61e-89 280
Msa0702560 MtrunA17_Chr1g0207971 34.194 465 280 9 7 459 5 455 6.55e-88 276
Msa0702560 MtrunA17_Chr1g0161351 35.565 478 283 10 1 459 28 499 1.32e-87 276
Msa0702560 MtrunA17_Chr5g0393591 33.191 470 245 11 10 459 17 437 1.21e-84 267
Msa0702560 MtrunA17_Chr8g0365811 34.519 478 284 11 3 458 488 958 1.59e-84 279
Msa0702560 MtrunA17_Chr8g0365811 35.220 477 278 12 7 458 6 476 3.73e-82 273
Msa0702560 MtrunA17_Chr5g0401721 34.737 475 273 15 9 457 7 470 6.38e-84 266
Msa0702560 MtrunA17_Chr1g0207951 34.591 477 283 11 2 459 644 1110 1.26e-82 276
Msa0702560 MtrunA17_Chr1g0207951 33.333 474 285 8 3 459 113 572 1.27e-82 276
Msa0702560 MtrunA17_Chr7g0250021 41.824 318 179 4 6 321 8 321 1.74e-82 257
Msa0702560 MtrunA17_Chr1g0207831 32.484 471 286 12 9 459 7 465 1.98e-80 257
Msa0702560 MtrunA17_Chr1g0207931 32.704 477 237 12 4 459 86 499 1.57e-78 253
Msa0702560 MtrunA17_Chr7g0249961 48.117 239 120 2 220 457 24 259 1.20e-74 235
Msa0702560 MtrunA17_Chr3g0092641 34.375 480 270 16 10 457 12 478 2.14e-74 241
Msa0702560 MtrunA17_Chr5g0426431 33.191 467 269 14 10 445 12 466 9.21e-72 234
Msa0702560 MtrunA17_Chr6g0454341 31.866 477 287 15 10 457 10 477 1.14e-68 226
Msa0702560 MtrunA17_Chr2g0278711 31.667 480 282 14 10 457 11 476 8.82e-68 224
Msa0702560 MtrunA17_Chr3g0078841 31.601 481 283 18 10 457 10 477 4.83e-66 219
Msa0702560 MtrunA17_Chr4g0050341 32.720 489 279 13 7 458 16 491 1.26e-65 219
Msa0702560 MtrunA17_Chr5g0412111 32.627 472 285 15 10 460 5 464 2.22e-65 217
Msa0702560 MtrunA17_Chr3g0112761 33.475 472 266 20 4 454 2 446 1.67e-64 215
Msa0702560 MtrunA17_Chr7g0218791 30.851 470 277 11 10 459 5 446 1.77e-64 214
Msa0702560 MtrunA17_Chr7g0217881 32.473 465 284 14 10 457 10 461 3.04e-64 214
Msa0702560 MtrunA17_Chr6g0454191 30.754 491 295 15 1 457 1 480 3.39e-64 214
Msa0702560 MtrunA17_Chr3g0118711 29.854 479 294 14 10 457 13 480 8.23e-64 214
Msa0702560 MtrunA17_Chr8g0336331 30.722 485 290 16 4 457 7 476 1.38e-63 213
Msa0702560 MtrunA17_Chr5g0412131 33.881 487 278 19 1 460 3 472 1.62e-63 213
Msa0702560 MtrunA17_Chr8g0359821 30.042 476 297 12 10 457 10 477 1.78e-63 213
Msa0702560 MtrunA17_Chr5g0412101 33.608 485 281 17 2 460 4 473 1.64e-62 210
Msa0702560 MtrunA17_Chr3g0118671 29.278 485 295 14 9 459 5 475 2.15e-62 210
Msa0702560 MtrunA17_Chr6g0454301 30.398 477 294 13 10 457 263 730 4.47e-62 214
Msa0702560 MtrunA17_Chr6g0454301 35.922 206 122 4 255 456 29 228 1.60e-35 139
Msa0702560 MtrunA17_Chr6g0454331 29.508 488 294 14 7 457 4 478 1.35e-61 208
Msa0702560 MtrunA17_Chr3g0106231 32.059 471 266 15 10 460 18 454 2.39e-61 207
Msa0702560 MtrunA17_Chr5g0431441 30.769 468 284 14 10 457 18 465 3.32e-61 206
Msa0702560 MtrunA17_Chr3g0118771 28.866 485 299 15 6 457 17 488 6.19e-60 204
Msa0702560 MtrunA17_Chr6g0454401 30.061 489 283 17 10 457 10 480 6.53e-60 203
Msa0702560 MtrunA17_Chr3g0118691 29.167 480 296 14 10 457 15 482 8.78e-60 203
Msa0702560 MtrunA17_Chr6g0454321 30.323 465 282 13 10 443 10 463 1.64e-59 206
Msa0702560 MtrunA17_Chr6g0454141 29.796 490 282 16 10 457 10 479 5.23e-59 201
Msa0702560 MtrunA17_Chr3g0118701 28.898 481 296 15 10 457 15 482 7.18e-59 201
Msa0702560 MtrunA17_Chr7g0218831 30.323 465 272 13 10 455 6 437 1.82e-58 198
Msa0702560 MtrunA17_Chr6g0454151 30.584 497 282 20 1 457 4 477 3.12e-58 199
Msa0702560 MtrunA17_Chr6g0453961 30.165 484 289 16 10 457 19 489 3.49e-58 199
Msa0702560 MtrunA17_Chr6g0452771 30.123 488 283 13 10 457 10 479 1.39e-57 197
Msa0702560 MtrunA17_Chr3g0112771 31.579 475 283 16 1 457 1 451 1.65e-57 196
Msa0702560 MtrunA17_Chr7g0218811 28.947 456 291 8 10 455 15 447 2.02e-57 196
Msa0702560 MtrunA17_Chr6g0454361 29.124 491 284 15 10 457 11 480 2.77e-57 196
Msa0702560 MtrunA17_Chr6g0454291 30.247 486 291 15 7 457 4 476 8.33e-57 195
Msa0702560 MtrunA17_Chr6g0454181 29.012 486 291 14 10 457 10 479 1.02e-56 195
Msa0702560 MtrunA17_Chr6g0454201 30.021 483 290 14 10 457 11 480 1.08e-56 195
Msa0702560 MtrunA17_Chr7g0243631 30.943 488 287 15 9 458 12 487 1.13e-56 195
Msa0702560 MtrunA17_Chr5g0423981 29.638 469 275 15 10 457 10 444 1.38e-56 194
Msa0702560 MtrunA17_Chr5g0431361 27.837 467 293 11 10 457 12 453 5.66e-56 192
Msa0702560 MtrunA17_Chr7g0243681 29.960 504 283 19 1 458 1 480 1.19e-55 192
Msa0702560 MtrunA17_Chr3g0118661 28.274 481 304 15 6 456 9 478 2.82e-55 191
Msa0702560 MtrunA17_Chr6g0454211 29.814 483 291 15 10 457 297 766 4.10e-55 196
Msa0702560 MtrunA17_Chr6g0454211 30.583 206 112 5 167 371 61 236 3.57e-18 87.4
Msa0702560 MtrunA17_Chr6g0454261 28.485 495 297 15 1 457 4 479 5.96e-55 190
Msa0702560 MtrunA17_Chr7g0218841 30.501 459 278 13 10 454 6 437 7.03e-55 189
Msa0702560 MtrunA17_Chr4g0032331 31.435 474 261 17 10 454 8 446 1.42e-54 188
Msa0702560 MtrunA17_Chr6g0454351 29.835 486 270 19 10 457 12 464 2.09e-54 188
Msa0702560 MtrunA17_Chr7g0218821 28.753 473 287 13 10 458 5 451 2.88e-54 187
Msa0702560 MtrunA17_Chr6g0454131 29.545 484 290 18 10 457 10 478 1.36e-53 186
Msa0702560 MtrunA17_Chr6g0453951 28.067 481 302 15 10 457 57 526 1.64e-53 187
Msa0702560 MtrunA17_Chr7g0243931 30.060 499 294 15 1 458 7 491 2.57e-53 186
Msa0702560 MtrunA17_Chr5g0431401 28.105 459 299 11 10 457 10 448 2.93e-53 185
Msa0702560 MtrunA17_Chr5g0448551 29.742 427 272 11 11 425 8 418 3.48e-53 185
Msa0702560 MtrunA17_Chr3g0118751 28.721 477 273 15 10 457 6 444 8.56e-53 184
Msa0702560 MtrunA17_Chr7g0232401 28.986 483 297 14 6 458 2 468 1.07e-52 184
Msa0702560 MtrunA17_Chr8g0366391 28.776 490 302 17 3 458 2 478 4.43e-52 182
Msa0702560 MtrunA17_Chr6g0454121 27.629 485 298 14 10 457 10 478 5.31e-52 182
Msa0702560 MtrunA17_Chr7g0275511 29.979 487 262 14 11 451 16 469 1.36e-51 181
Msa0702560 MtrunA17_Chr4g0044511 28.747 487 298 16 5 458 35 505 1.63e-51 181
Msa0702560 MtrunA17_Chr7g0243951 30.297 505 284 19 1 458 1 484 1.75e-51 181
Msa0702560 MtrunA17_Chr7g0243771 29.960 504 271 19 7 458 3 476 2.19e-51 181
Msa0702560 MtrunA17_Chr8g0347281 30.126 478 273 13 11 454 19 469 3.76e-51 180
Msa0702560 MtrunA17_Chr7g0243871 30.140 501 276 19 3 458 2 473 4.45e-51 180
Msa0702560 MtrunA17_Chr5g0432731 36.641 262 149 6 202 457 46 296 1.82e-50 173
Msa0702560 MtrunA17_Chr7g0265141 30.754 504 274 17 5 456 4 484 2.01e-50 178
Msa0702560 MtrunA17_Chr4g0060511 28.231 503 296 18 3 458 4 488 2.96e-50 178
Msa0702560 MtrunA17_Chr7g0243761 28.921 491 275 14 3 458 4 455 1.73e-49 175
Msa0702560 MtrunA17_Chr5g0419771 29.821 503 290 19 1 457 27 512 1.77e-49 176
Msa0702560 MtrunA17_Chr5g0401851 29.839 496 298 15 1 458 1 484 2.28e-49 175
Msa0702560 MtrunA17_Chr7g0243861 29.921 508 278 19 3 458 7 488 2.66e-49 175
Msa0702560 MtrunA17_Chr5g0431371 25.974 462 305 10 10 457 10 448 3.15e-49 174
Msa0702560 MtrunA17_Chr6g0449931 29.895 475 277 14 7 446 3 456 8.29e-49 174
Msa0702560 MtrunA17_Chr5g0431421 27.015 459 304 11 10 457 10 448 1.02e-48 172
Msa0702560 MtrunA17_Chr8g0373301 30.242 496 271 18 1 454 1 463 1.68e-48 172
Msa0702560 MtrunA17_Chr7g0243801 29.541 501 281 19 5 458 2 477 1.91e-48 173
Msa0702560 MtrunA17_Chr8g0361371 29.860 499 273 19 1 454 1 467 8.18e-48 171
Msa0702560 MtrunA17_Chr4g0044501 29.184 490 299 18 1 457 1 475 1.12e-47 171
Msa0702560 MtrunA17_Chr7g0232391 27.443 481 301 12 6 456 2 464 1.15e-47 170
Msa0702560 MtrunA17_Chr7g0232331 27.800 500 282 13 6 459 2 468 2.40e-47 169
Msa0702560 MtrunA17_Chr8g0347271 28.690 481 276 13 11 454 20 470 2.65e-47 169
Msa0702560 MtrunA17_Chr4g0066151 27.108 498 297 16 1 458 9 480 3.50e-47 169
Msa0702560 MtrunA17_Chr4g0014061 28.921 491 289 19 5 457 4 472 3.57e-47 169
Msa0702560 MtrunA17_Chr7g0232411 27.160 486 296 11 6 456 2 464 5.53e-47 168
Msa0702560 MtrunA17_Chr8g0334851 28.692 474 286 12 7 446 3 458 9.01e-47 168
Msa0702560 MtrunA17_Chr5g0426401 34.122 296 172 9 150 436 7 288 9.67e-47 164
Msa0702560 MtrunA17_Chr4g0044521 28.306 484 291 15 5 455 4 464 1.21e-46 167
Msa0702560 MtrunA17_Chr3g0106251 39.245 265 141 8 202 460 46 296 1.44e-46 163
Msa0702560 MtrunA17_Chr4g0066221 28.543 494 289 20 9 459 10 482 1.65e-46 167
Msa0702560 MtrunA17_Chr7g0265101 29.124 491 298 17 9 459 8 488 1.91e-46 168
Msa0702560 MtrunA17_Chr7g0243781 28.858 499 288 19 3 458 2 476 1.07e-45 165
Msa0702560 MtrunA17_Chr6g0462551 35.764 288 169 8 167 446 174 453 1.44e-45 165
Msa0702560 MtrunA17_Chr8g0336651 29.652 489 283 14 4 454 775 1240 1.53e-45 170
Msa0702560 MtrunA17_Chr8g0336651 27.950 483 287 14 8 454 4 461 8.52e-42 159
Msa0702560 MtrunA17_Chr8g0336651 34.074 270 141 7 192 454 532 771 6.09e-35 139
Msa0702560 MtrunA17_Chr4g0066131 26.263 495 305 13 2 459 5 476 3.05e-45 164
Msa0702560 MtrunA17_Chr8g0336691 29.243 489 283 15 4 454 913 1376 3.34e-45 169
Msa0702560 MtrunA17_Chr8g0336691 27.801 482 289 14 8 453 11 469 2.58e-42 160
Msa0702560 MtrunA17_Chr8g0336691 29.053 475 274 15 4 454 474 909 8.16e-42 159
Msa0702560 MtrunA17_Chr7g0232341 26.994 489 298 13 6 458 2 467 4.59e-45 163
Msa0702560 MtrunA17_Chr8g0336741 28.601 486 284 14 6 454 9 468 8.66e-45 162
Msa0702560 MtrunA17_Chr4g0072771 26.840 462 299 11 9 454 24 462 1.52e-44 162
Msa0702560 MtrunA17_Chr3g0118721 31.419 296 182 8 173 457 4 289 1.53e-44 157
Msa0702560 MtrunA17_Chr7g0265051 28.942 501 284 22 9 459 8 486 2.10e-44 162
Msa0702560 MtrunA17_Chr5g0429711 29.607 483 279 17 10 460 11 464 2.65e-44 161
Msa0702560 MtrunA17_Chr6g0462571 27.234 470 284 17 11 446 5 450 3.75e-44 161
Msa0702560 MtrunA17_Chr6g0463891 28.163 490 309 14 3 458 5 485 4.18e-44 161
Msa0702560 MtrunA17_Chr2g0294931 27.835 485 307 16 9 460 10 484 4.45e-44 161
Msa0702560 MtrunA17_Chr8g0339451 28.630 489 271 16 13 453 1 459 5.42e-44 160
Msa0702560 MtrunA17_Chr4g0072761 26.949 449 296 11 9 446 14 441 5.89e-44 160
Msa0702560 MtrunA17_Chr4g0066201 27.386 482 297 17 9 459 17 476 6.48e-44 160
Msa0702560 MtrunA17_Chr5g0416741 28.310 491 305 17 3 458 6 484 1.26e-43 160
Msa0702560 MtrunA17_Chr1g0153451 26.458 480 297 12 8 454 4 460 1.55e-43 159
Msa0702560 MtrunA17_Chr8g0339631 27.181 493 294 15 6 458 2 469 2.58e-43 159
Msa0702560 MtrunA17_Chr8g0339461 28.337 487 289 16 10 457 6 471 3.47e-43 158
Msa0702560 MtrunA17_Chr1g0179901 27.930 512 289 19 1 457 7 493 3.47e-43 159
Msa0702560 MtrunA17_Chr5g0429681 37.586 290 139 12 186 455 230 497 4.69e-43 158
Msa0702560 MtrunA17_Chr7g0235051 29.472 492 271 19 1 456 1 452 4.80e-43 158
Msa0702560 MtrunA17_Chr7g0265041 28.803 493 291 19 10 457 11 488 1.06e-42 157
Msa0702560 MtrunA17_Chr8g0335141 28.041 485 287 16 11 458 10 469 1.57e-42 156
Msa0702560 MtrunA17_Chr8g0334831 29.675 492 275 17 11 454 7 475 1.99e-42 156
Msa0702560 MtrunA17_Chr6g0454251 29.798 396 238 14 10 372 7 395 2.52e-42 154
Msa0702560 MtrunA17_Chr6g0454271 31.142 289 185 7 175 457 6 286 6.56e-42 150
Msa0702560 MtrunA17_Chr6g0486251 28.511 470 278 17 11 445 7 453 6.90e-42 154
Msa0702560 MtrunA17_Chr6g0486201 28.511 470 278 17 11 445 7 453 6.90e-42 154
Msa0702560 MtrunA17_Chr8g0336731 28.661 478 282 13 12 454 34 487 7.98e-42 155
Msa0702560 MtrunA17_Chr7g0243851 29.314 481 279 18 1 458 1 443 8.69e-42 154
Msa0702560 MtrunA17_Chr5g0419761 27.823 496 301 22 5 457 4 485 8.77e-42 155
Msa0702560 MtrunA17_Chr7g0275681 29.545 484 290 19 10 457 12 480 9.01e-42 154
Msa0702560 MtrunA17_Chr6g0462531 27.557 479 302 14 11 460 5 467 1.20e-41 154
Msa0702560 MtrunA17_Chr8g0374971 26.220 492 302 14 9 459 11 482 1.54e-41 154
Msa0702560 MtrunA17_Chr8g0335161 26.971 482 297 16 10 457 6 466 1.73e-41 154
Msa0702560 MtrunA17_Chr4g0066261 27.607 489 293 15 13 459 14 483 1.82e-41 154
Msa0702560 MtrunA17_Chr1g0159551 26.623 462 303 12 15 459 19 461 4.03e-41 152
Msa0702560 MtrunA17_Chr6g0463851 26.008 496 293 18 13 459 14 484 4.12e-41 153
Msa0702560 MtrunA17_Chr4g0066281 26.559 497 293 18 1 459 6 468 2.07e-40 150
Msa0702560 MtrunA17_Chr5g0428081 27.824 478 304 16 13 459 14 481 2.57e-40 150
Msa0702560 MtrunA17_Chr7g0232311 27.254 488 293 13 1 454 1 460 2.99e-40 150
Msa0702560 MtrunA17_Chr5g0440421 26.761 497 320 14 1 457 1 493 3.15e-40 150
Msa0702560 MtrunA17_Chr2g0294921 26.694 487 308 17 9 459 159 632 6.62e-40 152
Msa0702560 MtrunA17_Chr6g0454221 36.408 206 121 4 255 456 30 229 8.73e-40 145
Msa0702560 MtrunA17_Chr5g0416821 26.789 489 304 16 3 458 7 474 8.87e-40 149
Msa0702560 MtrunA17_Chr6g0463861 27.216 485 292 16 13 459 14 475 1.09e-39 149
Msa0702560 MtrunA17_Chr8g0374901 27.530 494 283 18 13 459 15 480 2.34e-39 148
Msa0702560 MtrunA17_Chr6g0459311 27.331 472 281 17 11 445 14 460 2.39e-39 148
Msa0702560 MtrunA17_Chr3g0079731 26.453 499 302 13 1 455 1 478 2.97e-39 147
Msa0702560 MtrunA17_Chr1g0173121 26.582 474 299 15 11 459 15 464 4.52e-39 147
Msa0702560 MtrunA17_Chr6g0462521 31.861 317 176 9 146 446 147 439 6.09e-39 146
Msa0702560 MtrunA17_Chr8g0374931 25.820 488 301 18 14 459 15 483 7.52e-39 147
Msa0702560 MtrunA17_Chr8g0374941 27.033 492 292 18 13 460 952 1420 8.83e-39 150
Msa0702560 MtrunA17_Chr8g0374941 26.271 472 281 19 13 440 14 462 2.78e-32 130
Msa0702560 MtrunA17_Chr8g0374941 26.134 463 291 13 13 439 479 926 3.53e-32 130
Msa0702560 MtrunA17_Chr5g0431431 31.235 413 206 14 1 409 1 339 1.26e-38 143
Msa0702560 MtrunA17_Chr8g0350881 26.749 486 309 15 9 460 11 483 1.75e-38 145
Msa0702560 MtrunA17_Chr5g0410941 26.337 486 307 15 9 459 22 491 1.87e-38 145
Msa0702560 MtrunA17_Chr4g0011051 27.565 497 295 17 9 457 8 487 2.27e-38 145
Msa0702560 MtrunA17_Chr4g0044481 28.702 439 250 14 10 423 27 427 3.43e-38 144
Msa0702560 MtrunA17_Chr6g0462541 30.625 320 184 10 146 446 152 452 4.34e-38 144
Msa0702560 MtrunA17_Chr5g0420801 26.639 488 294 15 6 459 3 460 6.36e-38 144
Msa0702560 MtrunA17_Chr8g0382021 24.742 485 292 15 15 459 39 490 7.97e-38 144
Msa0702560 MtrunA17_Chr8g0334861 30.133 375 211 10 113 456 108 462 2.23e-37 142
Msa0702560 MtrunA17_Chr7g0265151 27.328 494 308 18 3 457 2 483 3.04e-37 142
Msa0702560 MtrunA17_Chr8g0361411 25.482 467 308 15 10 457 8 453 4.34e-37 141
Msa0702560 MtrunA17_Chr5g0442561 26.069 491 293 14 10 455 5 470 4.34e-37 141
Msa0702560 MtrunA17_Chr6g0454171 30.675 326 179 13 142 457 21 309 5.15e-37 138
Msa0702560 MtrunA17_Chr7g0243711 33.840 263 153 6 211 458 61 317 7.96e-37 137
Msa0702560 MtrunA17_Chr4g0042931 27.551 490 284 22 9 458 6 464 9.34e-37 140
Msa0702560 MtrunA17_Chr4g0066171 24.580 476 317 13 9 459 20 478 5.35e-36 139
Msa0702560 MtrunA17_Chr8g0339601 32.075 318 169 9 165 453 27 326 1.24e-35 134
Msa0702560 MtrunA17_Chr8g0355221 25.451 499 298 18 9 458 14 487 2.28e-35 137
Msa0702560 MtrunA17_Chr8g0370941 24.851 503 289 15 10 451 8 482 5.57e-35 136
Msa0702560 MtrunA17_Chr5g0442601 25.641 507 289 17 5 455 399 873 8.67e-35 138
Msa0702560 MtrunA17_Chr5g0442601 25.329 304 153 8 111 383 62 322 4.78e-16 80.9
Msa0702560 MtrunA17_Chr5g0442521 24.797 492 299 14 11 455 6 473 2.13e-34 134
Msa0702560 MtrunA17_Chr7g0265111 27.455 499 301 16 7 460 36 518 2.26e-34 135
Msa0702560 MtrunA17_Chr7g0241781 26.998 463 283 16 3 451 2 423 2.27e-34 133
Msa0702560 MtrunA17_Chr4g0042891 32.484 314 171 13 167 458 172 466 2.74e-34 134
Msa0702560 MtrunA17_Chr7g0218311 25.202 496 301 17 9 459 15 485 5.66e-34 133
Msa0702560 MtrunA17_Chr1g0165701 26.423 492 299 19 9 458 14 484 5.82e-34 133
Msa0702560 MtrunA17_Chr5g0442541 26.052 499 276 16 10 455 5 463 6.80e-34 132
Msa0702560 MtrunA17_Chr7g0241801 26.608 451 256 18 3 429 2 401 7.56e-34 132
Msa0702560 MtrunA17_Chr8g0369341 24.798 496 303 15 6 459 3 470 1.37e-33 132
Msa0702560 MtrunA17_Chr2g0307961 25.667 487 306 16 3 457 6 468 1.39e-33 132
Msa0702560 MtrunA17_Chr2g0329111 26.962 497 311 17 1 460 1 482 1.77e-33 132
Msa0702560 MtrunA17_Chr5g0442491 25.451 499 286 16 11 455 6 472 2.06e-33 131
Msa0702560 MtrunA17_Chr5g0448521 25.000 488 281 16 9 446 4 456 5.45e-33 130
Msa0702560 MtrunA17_Chr5g0403641 31.646 316 173 8 164 450 194 495 5.66e-33 130
Msa0702560 MtrunA17_Chr1g0207881 41.844 141 80 1 321 459 246 386 2.81e-32 127
Msa0702560 MtrunA17_Chr1g0207881 29.032 279 161 8 9 276 7 259 3.35e-27 112
Msa0702560 MtrunA17_Chr8g0355011 26.287 369 199 10 110 457 45 361 3.73e-32 125
Msa0702560 MtrunA17_Chr8g0336251 27.902 491 282 18 8 458 5 463 3.74e-32 127
Msa0702560 MtrunA17_Chr1g0153461 33.810 210 124 3 264 458 4 213 6.22e-32 121
Msa0702560 MtrunA17_Chr8g0336321 28.138 494 277 19 8 458 5 463 6.40e-32 127
Msa0702560 MtrunA17_Chr5g0442581 24.847 491 303 15 10 455 5 474 1.03e-31 127
Msa0702560 MtrunA17_Chr8g0339441 35.096 208 117 4 264 453 218 425 4.49e-31 124
Msa0702560 MtrunA17_Chr6g0454371 36.416 173 100 4 289 457 4 170 9.13e-31 117
Msa0702560 MtrunA17_Chr2g0294941 27.374 358 218 13 113 440 17 362 1.77e-30 121
Msa0702560 MtrunA17_Chr5g0409591 25.466 483 272 16 8 430 2 456 1.98e-30 123
Msa0702560 MtrunA17_Chr7g0243911 34.146 205 124 4 257 453 15 216 3.29e-30 117
Msa0702560 MtrunA17_Chr7g0243611 37.736 212 118 7 209 409 80 288 1.35e-29 117
Msa0702560 MtrunA17_Chr7g0231631 32.384 281 151 11 196 458 1 260 1.10e-28 114
Msa0702560 MtrunA17_Chr5g0442511 25.257 487 285 17 10 458 49 494 2.92e-28 117
Msa0702560 MtrunA17_Chr2g0302961 24.395 496 302 17 7 459 2 467 4.14e-28 116
Msa0702560 MtrunA17_Chr2g0302991 24.898 490 304 17 7 459 2 464 5.46e-28 115
Msa0702560 MtrunA17_Chr6g0482061 24.138 493 307 18 10 458 11 480 1.35e-27 115
Msa0702560 MtrunA17_Chr8g0367221 25.152 493 308 16 1 459 1281 1746 2.64e-27 115
Msa0702560 MtrunA17_Chr8g0367221 24.262 474 285 20 5 437 7 447 6.36e-26 111
Msa0702560 MtrunA17_Chr8g0367221 26.496 468 283 20 5 437 793 1234 3.36e-25 109
Msa0702560 MtrunA17_Chr7g0243811 27.981 411 234 18 22 399 1 382 3.61e-27 112
Msa0702560 MtrunA17_Chr4g0029131 24.477 478 279 17 2 438 4 440 3.86e-27 114
Msa0702560 MtrunA17_Chr3g0079711 34.783 184 102 4 290 455 3 186 3.86e-27 107
Msa0702560 MtrunA17_Chr8g0336261 39.850 133 70 4 289 417 4 130 2.98e-26 103
Msa0702560 MtrunA17_Chr7g0232351 25.980 408 229 15 6 371 2 378 1.18e-25 107
Msa0702560 MtrunA17_Chr4g0040711 25.499 451 301 15 6 437 4 438 1.43e-25 108
Msa0702560 MtrunA17_Chr5g0427571 32.707 266 163 8 202 458 39 297 5.16e-25 104
Msa0702560 MtrunA17_Chr2g0302851 23.904 456 292 14 2 430 8 435 4.32e-24 104
Msa0702560 MtrunA17_Chr2g0278721 22.727 462 297 13 2 431 7 440 5.25e-24 105
Msa0702560 MtrunA17_Chr2g0278721 23.656 465 300 15 1 431 508 951 8.80e-24 105
Msa0702560 MtrunA17_Chr6g0466831 24.153 472 325 14 2 459 10 462 5.54e-24 104
Msa0702560 MtrunA17_Chr4g0069611 23.904 456 278 15 9 430 14 434 8.82e-24 103
Msa0702560 MtrunA17_Chr8g0337381 38.211 123 72 2 332 453 2 121 2.13e-23 95.5
Msa0702560 MtrunA17_Chr6g0454231 28.629 248 131 7 202 446 2 206 3.35e-23 102
Msa0702560 MtrunA17_Chr6g0454231 25.217 230 147 6 10 216 250 477 2.23e-11 65.9
Msa0702560 MtrunA17_Chr4g0040691 25.054 459 293 15 6 437 4 438 7.20e-23 100
Msa0702560 MtrunA17_Chr1g0207911 25.926 243 166 4 9 240 7 246 9.89e-23 97.1
Msa0702560 MtrunA17_Chr6g0466841 24.379 443 306 13 2 430 10 437 1.95e-22 99.8
Msa0702560 MtrunA17_Chr2g0278741 22.944 462 294 15 3 431 90 522 6.21e-22 98.6
Msa0702560 MtrunA17_Chr1g0196851 24.094 469 281 18 9 438 48 480 7.11e-22 98.2
Msa0702560 MtrunA17_Chr2g0283041 23.395 483 298 17 10 457 7 452 2.73e-21 96.3
Msa0702560 MtrunA17_Chr2g0319801 25.764 458 289 17 7 437 5 438 5.86e-21 95.1
Msa0702560 MtrunA17_Chr6g0464091 23.673 452 293 15 9 431 17 445 1.43e-20 94.0
Msa0702560 MtrunA17_Chr2g0319761 24.689 482 282 20 9 448 7 449 3.60e-20 92.8
Msa0702560 MtrunA17_Chr8g0377911 37.681 138 77 4 11 144 8 140 6.00e-20 86.7
Msa0702560 MtrunA17_Chr7g0249971 45.238 84 42 1 6 89 7 86 8.16e-20 85.5
Msa0702560 MtrunA17_Chr8g0357361 39.259 135 79 3 264 396 118 251 9.78e-20 89.0
Msa0702560 MtrunA17_Chr4g0029151 31.016 187 112 6 266 438 265 448 4.26e-19 89.7
Msa0702560 MtrunA17_Chr2g0319731 26.022 465 279 19 7 437 22 455 7.12e-19 89.0
Msa0702560 MtrunA17_Chr2g0319791 24.893 466 279 19 9 437 7 438 8.68e-19 88.6
Msa0702560 MtrunA17_Chr4g0066141 31.210 157 97 3 313 458 196 352 1.37e-18 87.0
Msa0702560 MtrunA17_Chr3g0092031 30.539 167 113 3 266 430 6 171 4.16e-18 82.8
Msa0702560 MtrunA17_Chr2g0319751 24.364 472 278 18 9 439 484 917 9.10e-18 86.3
Msa0702560 MtrunA17_Chr4g0039881 26.957 230 157 6 205 430 189 411 2.67e-17 84.0
Msa0702560 MtrunA17_Chr6g0453981 32.620 187 112 7 150 329 48 227 6.84e-17 79.7
Msa0702560 MtrunA17_Chr6g0453941 24.675 308 162 10 10 309 11 256 4.69e-15 75.5
Msa0702560 MtrunA17_Chr5g0426411 30.061 163 102 6 4 157 6 165 6.90e-15 72.8
Msa0702560 MtrunA17_Chr5g0442501 25.806 310 202 10 11 307 6 300 9.97e-14 72.0
Msa0702560 MtrunA17_Chr8g0336271 26.721 247 146 11 4 224 7 244 1.28e-13 71.2
Msa0702560 MtrunA17_Chr7g0243731 42.308 78 44 1 325 401 1 78 3.04e-12 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0702560 AT2G43840.2 52.643 454 197 7 10 458 7 447 4.97e-171 488
Msa0702560 AT2G43840.1 52.423 454 198 7 10 458 7 447 5.19e-170 486
Msa0702560 AT2G43820.1 50.972 463 206 8 1 458 1 447 8.52e-166 475
Msa0702560 AT2G31790.1 44.371 453 237 6 10 454 8 453 3.68e-135 397
Msa0702560 AT1G05675.1 44.346 451 240 5 10 455 6 450 3.84e-133 392
Msa0702560 AT1G05680.1 44.105 458 231 7 10 455 6 450 1.90e-132 390
Msa0702560 AT2G31750.2 43.871 465 242 9 5 460 3 457 4.67e-123 367
Msa0702560 AT2G31750.1 43.750 464 242 9 5 459 3 456 6.27e-123 366
Msa0702560 AT1G24100.1 40.564 461 252 10 10 459 11 460 9.60e-112 337
Msa0702560 AT4G15480.1 34.188 468 282 8 9 457 18 478 5.10e-104 318
Msa0702560 AT3G21560.1 36.285 463 278 8 10 457 12 472 2.10e-102 315
Msa0702560 AT4G15490.1 35.714 476 269 14 6 457 4 466 8.72e-101 310
Msa0702560 AT4G15550.1 35.802 486 247 13 10 456 13 472 2.92e-94 293
Msa0702560 AT1G05560.1 35.470 468 261 10 10 457 5 451 4.36e-93 290
Msa0702560 AT1G05560.2 35.158 475 267 10 3 457 48 501 1.01e-92 290
Msa0702560 AT4G15500.1 34.335 466 290 9 3 457 2 462 1.04e-92 289
Msa0702560 AT1G05530.1 36.364 462 268 9 10 457 5 454 1.62e-91 285
Msa0702560 AT4G14090.1 37.093 461 257 12 10 456 13 454 1.17e-88 278
Msa0702560 AT2G23260.1 33.763 465 288 10 1 457 1 453 1.18e-85 270
Msa0702560 AT2G23250.1 34.146 451 275 9 13 457 1 435 4.98e-83 263
Msa0702560 AT1G22360.1 33.058 484 280 15 6 457 6 477 1.50e-78 253
Msa0702560 AT1G22400.1 32.919 483 283 16 6 457 9 481 2.84e-76 247
Msa0702560 AT1G22380.1 32.917 480 278 17 10 457 13 480 1.47e-71 234
Msa0702560 AT1G22360.2 31.818 484 274 15 6 457 6 465 6.23e-71 232
Msa0702560 AT1G22340.1 32.008 478 286 12 10 457 13 481 5.60e-70 230
Msa0702560 AT1G78270.1 31.098 492 292 14 1 457 1 480 7.57e-65 217
Msa0702560 AT1G22370.2 32.773 476 279 16 10 457 13 475 1.74e-64 216
Msa0702560 AT2G36970.1 28.926 484 305 12 1 458 1 471 2.65e-64 215
Msa0702560 AT5G59590.1 29.916 478 285 13 1 457 1 449 3.23e-62 209
Msa0702560 AT3G02100.1 29.158 487 280 14 4 458 7 460 2.36e-59 202
Msa0702560 AT5G38010.1 29.958 474 294 13 1 457 1 453 2.38e-59 201
Msa0702560 AT3G46670.1 31.950 482 268 15 3 458 2 449 8.52e-59 200
Msa0702560 AT5G59580.1 30.704 469 276 14 10 458 9 448 1.16e-58 199
Msa0702560 AT2G30140.2 30.769 468 274 16 10 457 13 450 2.07e-58 199
Msa0702560 AT2G28080.1 28.139 462 302 10 14 457 22 471 3.88e-58 199
Msa0702560 AT2G30140.1 30.490 469 275 16 10 457 13 451 6.77e-58 197
Msa0702560 AT3G46660.1 30.169 474 289 12 3 458 7 456 1.04e-57 197
Msa0702560 AT2G15480.1 27.992 493 306 14 1 457 1 480 2.62e-57 197
Msa0702560 AT2G15490.3 28.099 484 301 14 9 457 6 477 3.55e-56 194
Msa0702560 AT2G15490.1 28.131 487 300 14 9 457 6 480 3.33e-55 191
Msa0702560 AT2G30150.2 27.505 469 294 12 10 459 13 454 3.63e-55 190
Msa0702560 AT2G15480.2 27.634 503 305 16 1 457 1 490 1.58e-54 189
Msa0702560 AT5G38040.1 31.290 473 285 14 1 457 1 449 6.01e-54 187
Msa0702560 AT2G30150.1 27.312 465 292 12 14 459 1 438 1.70e-53 186
Msa0702560 AT5G05870.1 29.412 476 289 13 5 457 3 454 8.62e-53 184
Msa0702560 AT5G17050.1 28.238 471 289 12 10 457 12 456 2.22e-52 183
Msa0702560 AT5G14860.1 29.116 498 287 16 6 460 4 478 9.71e-52 182
Msa0702560 AT3G46650.1 28.821 458 291 14 1 453 1 428 1.25e-51 181
Msa0702560 AT5G05880.1 30.573 471 280 16 5 455 3 446 1.42e-51 181
Msa0702560 AT1G10400.1 27.368 475 301 13 9 457 6 462 2.57e-50 178
Msa0702560 AT1G01420.1 30.233 473 281 15 10 452 8 461 3.68e-50 177
Msa0702560 AT1G01420.2 30.233 473 281 15 10 452 11 464 4.19e-50 177
Msa0702560 AT4G34138.1 31.161 491 278 21 7 457 8 478 1.27e-49 176
Msa0702560 AT3G46700.1 28.723 470 295 12 3 458 2 445 1.53e-49 175
Msa0702560 AT3G46680.1 28.692 474 289 17 1 455 4 447 3.19e-49 174
Msa0702560 AT5G05860.1 28.099 484 281 14 3 457 2 447 8.16e-49 173
Msa0702560 AT4G34131.1 29.630 486 290 18 9 457 9 479 1.26e-48 174
Msa0702560 AT3G46690.1 28.000 475 295 14 3 457 2 449 1.47e-48 172
Msa0702560 AT5G17040.1 26.386 451 317 5 10 459 5 441 1.76e-48 172
Msa0702560 AT2G16890.2 29.106 481 292 14 10 460 9 470 4.43e-48 172
Msa0702560 AT3G11340.1 27.195 467 301 14 1 454 1 441 5.69e-48 171
Msa0702560 AT2G26480.1 27.802 464 293 13 10 457 8 445 2.42e-47 169
Msa0702560 AT4G01070.1 26.804 485 297 13 1 451 1 461 1.18e-46 168
Msa0702560 AT1G30530.1 27.912 455 292 11 16 457 19 450 4.22e-46 166
Msa0702560 AT2G36800.1 29.234 496 299 18 2 457 4 487 1.37e-45 166
Msa0702560 AT5G05900.1 29.053 475 281 16 5 455 3 445 1.53e-45 164
Msa0702560 AT2G36750.1 28.776 490 293 19 9 457 9 483 7.28e-45 164
Msa0702560 AT1G22370.1 34.983 303 174 9 167 457 14 305 1.06e-44 159
Msa0702560 AT3G46720.1 28.361 476 285 14 3 458 2 441 7.36e-44 160
Msa0702560 AT2G36770.1 28.138 494 292 17 9 457 13 488 8.11e-44 160
Msa0702560 AT3G16520.3 31.339 351 214 11 111 446 113 451 2.63e-43 159
Msa0702560 AT5G17030.1 25.216 464 311 11 10 457 12 455 2.65e-43 159
Msa0702560 AT3G16520.2 31.871 342 206 11 111 437 113 442 3.45e-43 158
Msa0702560 AT3G16520.1 31.871 342 206 11 111 437 113 442 4.41e-43 158
Msa0702560 AT3G55700.1 28.571 476 295 14 1 457 1 450 1.45e-42 157
Msa0702560 AT3G50740.1 29.124 491 289 16 5 456 2 472 1.96e-42 157
Msa0702560 AT4G34135.1 27.743 483 304 13 9 457 10 481 2.79e-42 156
Msa0702560 AT1G01390.1 28.092 477 297 14 5 452 3 462 4.77e-42 155
Msa0702560 AT1G01390.2 28.092 477 297 14 5 452 20 479 7.90e-42 155
Msa0702560 AT5G05890.1 27.349 479 289 13 5 455 3 450 1.26e-41 154
Msa0702560 AT3G55710.1 30.228 483 282 22 1 457 1 454 1.33e-41 154
Msa0702560 AT3G22250.1 27.376 442 279 12 11 426 9 434 1.37e-41 154
Msa0702560 AT5G26310.1 27.950 483 295 19 10 459 7 469 1.47e-41 154
Msa0702560 AT2G36760.1 26.569 478 306 12 9 450 13 481 2.40e-41 154
Msa0702560 AT2G29740.1 29.209 493 288 19 5 457 3 474 3.47e-41 153
Msa0702560 AT2G36790.1 29.774 487 293 18 9 457 12 487 4.99e-41 153
Msa0702560 AT5G17040.2 30.479 292 189 4 169 459 61 339 5.53e-41 149
Msa0702560 AT1G73880.1 25.261 479 317 15 2 457 6 466 9.19e-41 152
Msa0702560 AT5G66690.1 28.337 487 288 17 10 459 7 469 1.63e-40 151
Msa0702560 AT3G21790.1 27.416 507 285 18 9 460 3 481 2.87e-40 151
Msa0702560 AT2G36780.1 27.888 502 285 18 8 457 12 488 4.44e-40 150
Msa0702560 AT2G16890.3 28.966 435 261 13 10 415 9 424 4.49e-40 149
Msa0702560 AT5G03490.1 27.941 476 287 19 10 459 19 464 7.58e-40 149
Msa0702560 AT3G53160.1 28.803 493 290 21 9 457 7 482 1.22e-39 149
Msa0702560 AT3G53150.1 27.202 511 296 17 5 457 17 509 1.88e-39 149
Msa0702560 AT3G21800.1 26.978 493 295 14 11 459 6 477 1.02e-37 144
Msa0702560 AT1G07250.1 28.454 485 292 17 10 457 6 472 1.63e-37 143
Msa0702560 AT4G15280.2 26.680 506 291 20 3 457 29 505 2.39e-37 143
Msa0702560 AT3G21750.1 25.971 489 299 13 9 457 3 468 2.41e-37 142
Msa0702560 AT4G15280.1 27.000 500 285 20 9 457 3 473 4.53e-37 142
Msa0702560 AT4G36770.1 26.415 477 275 13 9 441 3 447 4.80e-37 141
Msa0702560 AT1G07260.1 28.041 485 299 16 7 457 3 471 9.96e-37 141
Msa0702560 AT3G21760.1 26.400 500 301 15 9 460 3 483 4.10e-36 139
Msa0702560 AT2G29730.1 26.050 476 310 14 8 457 3 462 3.50e-35 136
Msa0702560 AT4G15260.1 34.155 284 149 10 198 457 85 354 4.74e-34 131
Msa0702560 AT3G21780.1 26.804 485 300 19 9 457 3 468 5.63e-34 133
Msa0702560 AT4G27570.1 26.452 465 301 16 9 458 6 444 4.99e-33 130
Msa0702560 AT2G18570.1 26.946 501 272 20 10 456 5 465 1.06e-32 129
Msa0702560 AT2G29710.1 27.673 477 295 18 11 457 6 462 1.60e-32 129
Msa0702560 AT4G27560.1 25.957 470 297 16 9 458 6 444 2.40e-32 128
Msa0702560 AT2G18560.1 30.961 281 153 9 201 456 111 375 3.18e-32 127
Msa0702560 AT5G49690.1 26.569 478 303 18 1 459 1 449 6.50e-32 127
Msa0702560 AT1G06000.1 26.483 472 275 18 10 457 10 433 7.95e-32 126
Msa0702560 AT3G29630.1 24.625 467 309 18 7 458 3 441 5.63e-31 124
Msa0702560 AT1G51210.1 27.517 447 276 20 4 431 14 431 2.15e-30 122
Msa0702560 AT2G29750.1 26.931 505 283 22 5 457 3 473 5.62e-30 122
Msa0702560 AT1G07240.1 29.195 298 179 8 179 457 191 475 8.03e-30 121
Msa0702560 AT5G12890.1 25.100 498 313 16 1 456 1 480 9.95e-30 121
Msa0702560 AT5G54010.1 26.681 476 293 21 7 459 3 445 1.77e-29 120
Msa0702560 AT2G23210.1 30.769 273 167 9 10 274 10 268 1.98e-28 114
Msa0702560 AT3G29630.2 25.918 463 282 19 7 458 3 415 4.09e-28 115
Msa0702560 AT5G65550.1 24.561 456 280 18 9 429 8 434 7.06e-28 115
Msa0702560 AT2G22590.1 26.304 460 279 18 6 431 11 444 7.41e-28 115
Msa0702560 AT1G50580.1 24.026 462 308 15 6 451 2 436 1.82e-27 114
Msa0702560 AT5G53990.1 24.573 468 305 15 7 458 3 438 2.25e-27 114
Msa0702560 AT5G37950.1 28.532 361 230 10 25 373 1 345 4.32e-27 112
Msa0702560 AT5G37950.2 28.412 359 227 10 25 373 1 339 4.68e-27 111
Msa0702560 AT5G54060.1 26.195 481 301 21 5 457 8 462 6.60e-27 113
Msa0702560 AT1G64910.1 23.932 468 315 17 8 459 4 446 9.20e-27 112
Msa0702560 AT2G22930.1 22.462 463 321 13 8 459 4 439 3.30e-26 110
Msa0702560 AT1G64920.1 23.820 466 309 17 9 455 5 443 1.22e-24 106
Msa0702560 AT4G09500.2 22.366 465 319 15 9 460 5 440 8.63e-23 100
Msa0702560 AT4G01070.2 27.134 328 196 11 1 309 1 304 1.45e-21 95.9
Msa0702560 AT4G09500.1 22.294 462 298 16 9 460 5 415 4.63e-19 89.4
Msa0702560 AT4G34135.2 25.153 326 209 9 9 309 10 325 1.01e-18 87.4

Find 115 sgRNAs with CRISPR-Local

Find 329 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAGAATGATATCTGCTTTA+TGG 0.101976 4_4:+74217450 None:intergenic
AATGAGTTCCTTCAAATTCT+TGG 0.176613 4_4:+74217775 None:intergenic
GAAATAGCATTAGGATTATT+AGG 0.226331 4_4:-74216487 Msa0702560:CDS
ACTAATGTTAATATGTATTA+TGG 0.235132 4_4:-74215980 Msa0702560:three_prime_UTR
CTTATGGGTAATCCCTAATA+TGG 0.251252 4_4:-74216449 Msa0702560:CDS
GAAGTGGTTCAAATTTCTTA+TGG 0.275041 4_4:-74216465 Msa0702560:CDS
GTTGGCCCAATTGTCAATAT+TGG 0.291942 4_4:+74216679 None:intergenic
TACTCCCTTGTCCAAGTAAA+AGG 0.292888 4_4:+74216648 None:intergenic
AATATTGGAGTCCTTGGATT+TGG 0.299741 4_4:-74215928 Msa0702560:three_prime_UTR
CAATAGGTGATGAGTCTAAT+TGG 0.307848 4_4:+74216593 None:intergenic
TCCTAGTAAGTCAAATTCTT+TGG 0.311601 4_4:+74217676 None:intergenic
GGAAGCCCTGGCATAGAAAT+TGG 0.312817 4_4:+74217566 None:intergenic
ACACTTGAAGCATTGTGTTT+AGG 0.320691 4_4:-74216286 Msa0702560:CDS
AATTTAGAGAACTGAATATA+TGG 0.325289 4_4:+74218114 None:intergenic
ATACATATTAACATTAGTTT+AGG 0.330674 4_4:+74215985 None:intergenic
AAATCATTGTCTTTGTCATT+TGG 0.332954 4_4:+74216625 None:intergenic
GTATTTGTTTCAATTAATAT+TGG 0.341588 4_4:-74215943 Msa0702560:three_prime_UTR
CTTGTGCTTGTATCAATAAT+AGG 0.352941 4_4:-74218085 Msa0702560:five_prime_UTR
TCAGCTATTTATGTATCATT+TGG 0.358377 4_4:-74216544 Msa0702560:CDS
TGATTGGAGATGCATGGTTT+TGG 0.361111 4_4:+74217913 None:intergenic
CTTCAAATTCTTGGAGCCTA+TGG 0.363594 4_4:+74217784 None:intergenic
TCAATTAATATTGGAGTCCT+TGG 0.374516 4_4:-74215934 Msa0702560:three_prime_UTR
AAGTGGTTCAAATTTCTTAT+GGG 0.377984 4_4:-74216464 Msa0702560:CDS
TCATATACTACACAATCTAT+AGG 0.379795 4_4:+74217728 None:intergenic
AAGAGATTGAGAGTTGCATT+AGG 0.380560 4_4:-74216144 Msa0702560:CDS
GTTCTATCTAACAAAGCTAT+TGG 0.386677 4_4:-74216340 Msa0702560:CDS
GAAATTGGCATTGAAGATAT+AGG 0.387888 4_4:+74217581 None:intergenic
GAAATGAGTTCAAGTGGAAA+AGG 0.388516 4_4:-74216394 Msa0702560:CDS
ATCAATAATAGGAAAGGAAA+TGG 0.391481 4_4:-74218074 Msa0702560:exon
GAAAAGGGTTGGTAGTGAAT+TGG 0.401038 4_4:-74216378 Msa0702560:CDS
TTTGAATTCAGCCAATCAAT+AGG 0.404156 4_4:+74216577 None:intergenic
TCCAAAACCCATTGAAGAAA+AGG 0.404165 4_4:+74217704 None:intergenic
CTATGTCCAATATTGACAAT+TGG 0.407942 4_4:-74216685 Msa0702560:CDS
TGAAAATTAATGCTAAGAAA+TGG 0.408124 4_4:-74216090 Msa0702560:CDS
TAGACTCATCACCTATTGAT+TGG 0.418457 4_4:-74216588 Msa0702560:CDS
TGCTAAGAAATGGAGAGAAT+TGG 0.423410 4_4:-74216080 Msa0702560:CDS
AGAGTTAAGGTAAATGAGAA+TGG 0.425016 4_4:-74216181 Msa0702560:CDS
ACATAAATAGCTGACCCTTC+AGG 0.426164 4_4:+74216553 None:intergenic
CAAATGAAGGAAATAGCATT+AGG 0.428452 4_4:-74216496 Msa0702560:CDS
CATATACTACACAATCTATA+GGG 0.430640 4_4:+74217729 None:intergenic
AGCAAACGTTTGAGCACAAA+AGG 0.432736 4_4:-74217971 Msa0702560:CDS
TATGTCCAATATTGACAATT+GGG 0.442133 4_4:-74216684 Msa0702560:CDS
CCTTCCTTTGTTTATGACCC+TGG 0.449807 4_4:-74217521 Msa0702560:CDS
CGTTTGCTGAATTGAAGCAT+TGG 0.459472 4_4:+74217986 None:intergenic
AGAACTGAATATATGGTTTG+AGG 0.462913 4_4:+74218121 None:intergenic
CAATTTGACTTCATATCTGA+TGG 0.466660 4_4:-74217869 Msa0702560:CDS
GTTTGCTGAATTGAAGCATT+GGG 0.469700 4_4:+74217987 None:intergenic
TTGAAGGTAAGGATGATGAT+TGG 0.473871 4_4:+74217897 None:intergenic
AAGTCAAATTGAAGGGTTGA+AGG 0.475531 4_4:+74217881 None:intergenic
ATGTGACCTTGACTTGGGTA+TGG 0.475859 4_4:+74218013 None:intergenic
TTATGTATCATTTGGAAGCA+TGG 0.479963 4_4:-74216536 Msa0702560:CDS
GGGTTTATGTGACCTTGACT+TGG 0.481353 4_4:+74218007 None:intergenic
TCAATGCCAATTTCTATGCC+AGG 0.483097 4_4:-74217572 Msa0702560:CDS
CAGATATGAAGTCAAATTGA+AGG 0.488866 4_4:+74217873 None:intergenic
AAATTGAAGGGTTGAAGGTA+AGG 0.491787 4_4:+74217886 None:intergenic
ATTGAAGAAATGAGTTCAAG+TGG 0.492000 4_4:-74216400 Msa0702560:CDS
CTGGTCTTCTAGCTTGTAGA+AGG 0.493156 4_4:+74217421 None:intergenic
CTTCTACAAGCTAGAAGACC+AGG 0.493515 4_4:-74217420 Msa0702560:intron
GGTTGCTTTCTAACACATAG+TGG 0.494765 4_4:-74216319 Msa0702560:CDS
GCATTAGGATTATTAGGAAG+TGG 0.500366 4_4:-74216481 Msa0702560:CDS
GAAGCACCACCACTGACATA+AGG 0.502363 4_4:+74215881 None:intergenic
CATAGGCTCCAAGAATTTGA+AGG 0.504127 4_4:-74217783 Msa0702560:CDS
GTTGAGGATGTGTGGAAAGT+GGG 0.506952 4_4:-74216208 Msa0702560:CDS
GAAAGTGGGAATGAGAGTTA+AGG 0.512272 4_4:-74216194 Msa0702560:CDS
TAGTAAGCAGGATAGAAGCC+AGG 0.514306 4_4:+74217503 None:intergenic
GCCAAAGAATTTGACTTACT+AGG 0.518520 4_4:-74217677 Msa0702560:CDS
CTATCCTGCTTACTATGAGA+TGG 0.519933 4_4:-74217495 Msa0702560:CDS
TGTTGAGGATGTGTGGAAAG+TGG 0.525190 4_4:-74216209 Msa0702560:CDS
CCAAAACCCATTGAAGAAAA+GGG 0.527692 4_4:+74217705 None:intergenic
AAATGAGTTCAAGTGGAAAA+GGG 0.528479 4_4:-74216393 Msa0702560:CDS
AAAGTGATGGAAAATGACAT+TGG 0.536596 4_4:-74216121 Msa0702560:CDS
ATTGTGTTTAGGAGTGCCTA+TGG 0.537967 4_4:-74216275 Msa0702560:CDS
GAGTTAAGGTAAATGAGAAT+GGG 0.543847 4_4:-74216180 Msa0702560:CDS
AGATCAAGCAAAGGAAGCCC+TGG 0.546518 4_4:+74217554 None:intergenic
CCAGGGTCATAAACAAAGGA+AGG 0.547762 4_4:+74217521 None:intergenic
ATGTATTATTATGTTTACCA+TGG 0.551919 4_4:-74217617 Msa0702560:CDS
GGTTTATGTGACCTTGACTT+GGG 0.551938 4_4:+74218008 None:intergenic
ATATCTGATGGCTATGATGA+AGG 0.556777 4_4:-74217857 Msa0702560:CDS
CCCTTGTCCAAGTAAAAGGA+TGG 0.556992 4_4:+74216652 None:intergenic
CAATGCCAATTTCTATGCCA+GGG 0.557141 4_4:-74217571 Msa0702560:CDS
CTATCTCACATGAAAACCAT+AGG 0.561539 4_4:-74217800 Msa0702560:CDS
GCTTTCTAACACATAGTGGA+TGG 0.561712 4_4:-74216315 Msa0702560:CDS
CAAAATATGTTGAGGATGTG+TGG 0.562683 4_4:-74216216 Msa0702560:CDS
TAGGAAGCTTTAAAAGTCCA+TGG 0.564480 4_4:+74217600 None:intergenic
ATAACCATCTCATAGTAAGC+AGG 0.564645 4_4:+74217491 None:intergenic
CTTTAGCATAGAGCAAATGA+AGG 0.565909 4_4:-74216509 Msa0702560:CDS
AATTTGTAAATGAGCTGAAG+AGG 0.570594 4_4:-74216009 Msa0702560:CDS
AAGTAAAAGGATGGAACTGT+TGG 0.582183 4_4:+74216661 None:intergenic
CAGGGTCATAAACAAAGGAA+GGG 0.583374 4_4:+74217522 None:intergenic
AGTAAGCAGGATAGAAGCCA+GGG 0.586536 4_4:+74217504 None:intergenic
TTGAGGTGATAATGAATGCA+TGG 0.591573 4_4:+74218138 None:intergenic
ATGGTTCCATACCCAAGTCA+AGG 0.598862 4_4:-74218019 Msa0702560:CDS
GCTTGTATCAATAATAGGAA+AGG 0.601076 4_4:-74218080 Msa0702560:five_prime_UTR
TGGCTGAATTCAAAGCCTGA+AGG 0.601191 4_4:-74216568 Msa0702560:CDS
CACTGTGGTATTGCAACCAT+AGG 0.601959 4_4:+74216259 None:intergenic
AGTGAATTGGATACCACAGT+TGG 0.602235 4_4:-74216365 Msa0702560:CDS
TTATTGATACAAGCACAAGT+TGG 0.606580 4_4:+74218089 None:intergenic
GAAGGTGGCTTTGCTCAAGT+TGG 0.608792 4_4:-74217839 Msa0702560:CDS
TCTCATACAATCCAAATCCA+AGG 0.610873 4_4:+74215917 None:intergenic
AGATATGAAGTCAAATTGAA+GGG 0.612280 4_4:+74217874 None:intergenic
GGATGATGATTGGAGATGCA+TGG 0.615276 4_4:+74217907 None:intergenic
AGGGTCATAAACAAAGGAAG+GGG 0.619189 4_4:+74217523 None:intergenic
GCTATAGAAGCAGTAAGTCA+TGG 0.620556 4_4:-74216058 Msa0702560:CDS
GAGTTCAAGTGGAAAAGGGT+TGG 0.622029 4_4:-74216389 Msa0702560:CDS
GGCTGAATTCAAAGCCTGAA+GGG 0.623236 4_4:-74216567 Msa0702560:CDS
TTAGATAGAACTTCCAACTG+TGG 0.627701 4_4:+74216352 None:intergenic
GAAGCCAGGGTCATAAACAA+AGG 0.633076 4_4:+74217517 None:intergenic
GAGTTGCATTAGGAAAGTGA+TGG 0.636211 4_4:-74216134 Msa0702560:CDS
TTTGAATGCAAAATATGTTG+AGG 0.643170 4_4:-74216224 Msa0702560:CDS
TCTGATGGCTATGATGAAGG+TGG 0.677720 4_4:-74217854 Msa0702560:CDS
AAAAGGAGTTAACGTCACAA+TGG 0.689260 4_4:-74217954 Msa0702560:CDS
GTATCTTTGAGATCAAGCAA+AGG 0.699284 4_4:+74217545 None:intergenic
ATAGAAGCAGTAAGTCATGG+TGG 0.738041 4_4:-74216055 Msa0702560:CDS
AAAGGTTGATCAGTCCACTG+TGG 0.777400 4_4:+74216244 None:intergenic
CTATGGTTGCAATACCACAG+TGG 0.814711 4_4:-74216258 Msa0702560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAAATAAACAATAAATAG+AGG - chr4_4:74216735-74216754 Msa0702560:intron 10.0%
!! AAAAATAAACAATAAATAGA+GGG - chr4_4:74216736-74216755 Msa0702560:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG - chr4_4:74216884-74216903 Msa0702560:intron 10.0%
!! TAAAAATAAACAATAAATAG+AGG - chr4_4:74216735-74216754 Msa0702560:intron 10.0%
!! AAAAATAAACAATAAATAGA+GGG - chr4_4:74216736-74216755 Msa0702560:intron 10.0%
!! CTAAATTTAAATTTATTTCA+TGG - chr4_4:74216884-74216903 Msa0702560:intron 10.0%
!! ACATAATAAGGAATATAAAA+AGG + chr4_4:74216601-74216620 None:intergenic 15.0%
!! AAATAACTTCAAACATAATA+AGG + chr4_4:74216613-74216632 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG + chr4_4:74216913-74216932 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG + chr4_4:74217029-74217048 None:intergenic 15.0%
!!! TATTGATATAAACTGAATTT+TGG - chr4_4:74217191-74217210 Msa0702560:intron 15.0%
!!! ATACATATTAACATTAGTTT+AGG + chr4_4:74217996-74218015 None:intergenic 15.0%
!! ACTAATGTTAATATGTATTA+TGG - chr4_4:74217998-74218017 Msa0702560:CDS 15.0%
!! GTATTTGTTTCAATTAATAT+TGG - chr4_4:74218035-74218054 Msa0702560:CDS 15.0%
!! ACATAATAAGGAATATAAAA+AGG + chr4_4:74216601-74216620 None:intergenic 15.0%
!! AAATAACTTCAAACATAATA+AGG + chr4_4:74216613-74216632 None:intergenic 15.0%
!! AATTAAGAGTAATTAATACA+GGG + chr4_4:74216913-74216932 None:intergenic 15.0%
!!! ATAAAAGTGTCAAATATTTT+TGG + chr4_4:74217029-74217048 None:intergenic 15.0%
!!! TATTGATATAAACTGAATTT+TGG - chr4_4:74217191-74217210 Msa0702560:intron 15.0%
!!! ATACATATTAACATTAGTTT+AGG + chr4_4:74217996-74218015 None:intergenic 15.0%
!! ACTAATGTTAATATGTATTA+TGG - chr4_4:74217998-74218017 Msa0702560:CDS 15.0%
!! GTATTTGTTTCAATTAATAT+TGG - chr4_4:74218035-74218054 Msa0702560:CDS 15.0%
!! AATTTAGAGAACTGAATATA+TGG + chr4_4:74215867-74215886 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG - chr4_4:74216361-74216380 Msa0702560:CDS 20.0%
!! TAATAAGGAATATAAAAAGG+AGG + chr4_4:74216598-74216617 None:intergenic 20.0%
!!! TTTGTTTCTTACGAAAAAAT+CGG + chr4_4:74216807-74216826 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG + chr4_4:74216914-74216933 None:intergenic 20.0%
!! ATTAAAAGTAAGTAAGTTAG+TGG + chr4_4:74216936-74216955 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG + chr4_4:74217074-74217093 None:intergenic 20.0%
!!! ACCTCATATTTTAATTAATG+TGG - chr4_4:74217140-74217159 Msa0702560:intron 20.0%
!! ACCACATTAATTAAAATATG+AGG + chr4_4:74217144-74217163 None:intergenic 20.0%
!! TTCCATATGAATGATATATA+AGG - chr4_4:74217250-74217269 Msa0702560:intron 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG + chr4_4:74217544-74217563 None:intergenic 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG + chr4_4:74217545-74217564 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG - chr4_4:74217888-74217907 Msa0702560:CDS 20.0%
!! AATTTAGAGAACTGAATATA+TGG + chr4_4:74215867-74215886 None:intergenic 20.0%
!! ATGTATTATTATGTTTACCA+TGG - chr4_4:74216361-74216380 Msa0702560:CDS 20.0%
!! TAATAAGGAATATAAAAAGG+AGG + chr4_4:74216598-74216617 None:intergenic 20.0%
!!! TTTGTTTCTTACGAAAAAAT+CGG + chr4_4:74216807-74216826 None:intergenic 20.0%
!! GAATTAAGAGTAATTAATAC+AGG + chr4_4:74216914-74216933 None:intergenic 20.0%
!! ATTAAAAGTAAGTAAGTTAG+TGG + chr4_4:74216936-74216955 None:intergenic 20.0%
!! AGAGATCATATACATATAAA+TGG + chr4_4:74217074-74217093 None:intergenic 20.0%
!!! ACCTCATATTTTAATTAATG+TGG - chr4_4:74217140-74217159 Msa0702560:intron 20.0%
!! ACCACATTAATTAAAATATG+AGG + chr4_4:74217144-74217163 None:intergenic 20.0%
!! TTCCATATGAATGATATATA+AGG - chr4_4:74217250-74217269 Msa0702560:intron 20.0%
!!! TATTCTTTTTCTCCATATTA+GGG + chr4_4:74217544-74217563 None:intergenic 20.0%
!!! ATATTCTTTTTCTCCATATT+AGG + chr4_4:74217545-74217564 None:intergenic 20.0%
!! TGAAAATTAATGCTAAGAAA+TGG - chr4_4:74217888-74217907 Msa0702560:CDS 20.0%
! ATCAATAATAGGAAAGGAAA+TGG - chr4_4:74215904-74215923 Msa0702560:three_prime_UTR 25.0%
!!! TAGTAGTATGCATGTTTTAA+TGG - chr4_4:74215940-74215959 Msa0702560:three_prime_UTR 25.0%
! AGATATGAAGTCAAATTGAA+GGG + chr4_4:74216107-74216126 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG + chr4_4:74216252-74216271 None:intergenic 25.0%
! TCATATACTACACAATCTAT+AGG + chr4_4:74216253-74216272 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG + chr4_4:74216688-74216707 None:intergenic 25.0%
! AATAAACAATAAATAGAGGG+TGG - chr4_4:74216739-74216758 Msa0702560:intron 25.0%
!!! GGTCATTTTTATAAGAAACA+TGG + chr4_4:74217008-74217027 None:intergenic 25.0%
! CATATACATATAAATGGTCA+CGG + chr4_4:74217068-74217087 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG + chr4_4:74217255-74217274 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG - chr4_4:74217253-74217272 Msa0702560:intron 25.0%
! TATGTCCAATATTGACAATT+GGG - chr4_4:74217294-74217313 Msa0702560:intron 25.0%
! AAATCATTGTCTTTGTCATT+TGG + chr4_4:74217356-74217375 None:intergenic 25.0%
! TCAGCTATTTATGTATCATT+TGG - chr4_4:74217434-74217453 Msa0702560:CDS 25.0%
! GAAATAGCATTAGGATTATT+AGG - chr4_4:74217491-74217510 Msa0702560:CDS 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG - chr4_4:74217514-74217533 Msa0702560:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG + chr4_4:74217755-74217774 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG - chr4_4:74217754-74217773 Msa0702560:CDS 25.0%
!! TATTATTTTCCTTATGTCAG+TGG - chr4_4:74218088-74218107 Msa0702560:five_prime_UTR 25.0%
! ATCAATAATAGGAAAGGAAA+TGG - chr4_4:74215904-74215923 Msa0702560:three_prime_UTR 25.0%
!!! TAGTAGTATGCATGTTTTAA+TGG - chr4_4:74215940-74215959 Msa0702560:three_prime_UTR 25.0%
! AGATATGAAGTCAAATTGAA+GGG + chr4_4:74216107-74216126 None:intergenic 25.0%
! CATATACTACACAATCTATA+GGG + chr4_4:74216252-74216271 None:intergenic 25.0%
! TCATATACTACACAATCTAT+AGG + chr4_4:74216253-74216272 None:intergenic 25.0%
!!! GTGAAAGCAATTTTAATAAG+TGG + chr4_4:74216688-74216707 None:intergenic 25.0%
! AATAAACAATAAATAGAGGG+TGG - chr4_4:74216739-74216758 Msa0702560:intron 25.0%
!!! GGTCATTTTTATAAGAAACA+TGG + chr4_4:74217008-74217027 None:intergenic 25.0%
! CATATACATATAAATGGTCA+CGG + chr4_4:74217068-74217087 None:intergenic 25.0%
! CACCTTATATATCATTCATA+TGG + chr4_4:74217255-74217274 None:intergenic 25.0%
! CATATGAATGATATATAAGG+TGG - chr4_4:74217253-74217272 Msa0702560:intron 25.0%
! TATGTCCAATATTGACAATT+GGG - chr4_4:74217294-74217313 Msa0702560:intron 25.0%
! AAATCATTGTCTTTGTCATT+TGG + chr4_4:74217356-74217375 None:intergenic 25.0%
! TCAGCTATTTATGTATCATT+TGG - chr4_4:74217434-74217453 Msa0702560:CDS 25.0%
! GAAATAGCATTAGGATTATT+AGG - chr4_4:74217491-74217510 Msa0702560:CDS 25.0%
! AAGTGGTTCAAATTTCTTAT+GGG - chr4_4:74217514-74217533 Msa0702560:CDS 25.0%
!! TCAACATATTTTGCATTCAA+AGG + chr4_4:74217755-74217774 None:intergenic 25.0%
! TTTGAATGCAAAATATGTTG+AGG - chr4_4:74217754-74217773 Msa0702560:CDS 25.0%
!! TATTATTTTCCTTATGTCAG+TGG - chr4_4:74218088-74218107 Msa0702560:five_prime_UTR 25.0%
!!! AATGAATGCATGGTTTTGTA+CGG + chr4_4:74215833-74215852 None:intergenic 30.0%
AGAACTGAATATATGGTTTG+AGG + chr4_4:74215860-74215879 None:intergenic 30.0%
TTATTGATACAAGCACAAGT+TGG + chr4_4:74215892-74215911 None:intergenic 30.0%
CTTGTGCTTGTATCAATAAT+AGG - chr4_4:74215893-74215912 Msa0702560:three_prime_UTR 30.0%
GCTTGTATCAATAATAGGAA+AGG - chr4_4:74215898-74215917 Msa0702560:three_prime_UTR 30.0%
CAGATATGAAGTCAAATTGA+AGG + chr4_4:74216108-74216127 None:intergenic 30.0%
! CAATTTGACTTCATATCTGA+TGG - chr4_4:74216109-74216128 Msa0702560:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG + chr4_4:74216206-74216225 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG - chr4_4:74216266-74216285 Msa0702560:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG - chr4_4:74216267-74216286 Msa0702560:CDS 30.0%
TCCTAGTAAGTCAAATTCTT+TGG + chr4_4:74216305-74216324 None:intergenic 30.0%
! GAAATTGGCATTGAAGATAT+AGG + chr4_4:74216400-74216419 None:intergenic 30.0%
CAAGAATGATATCTGCTTTA+TGG + chr4_4:74216531-74216550 None:intergenic 30.0%
TAAGGAATATAAAAAGGAGG+AGG + chr4_4:74216595-74216614 None:intergenic 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG + chr4_4:74216848-74216867 None:intergenic 30.0%
TACATGATTCTGTTATGTGA+TGG + chr4_4:74217110-74217129 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG - chr4_4:74217202-74217221 Msa0702560:intron 30.0%
ATGAATGATATATAAGGTGG+TGG - chr4_4:74217256-74217275 Msa0702560:intron 30.0%
CTATGTCCAATATTGACAAT+TGG - chr4_4:74217293-74217312 Msa0702560:intron 30.0%
TTTGAATTCAGCCAATCAAT+AGG + chr4_4:74217404-74217423 None:intergenic 30.0%
TTATGTATCATTTGGAAGCA+TGG - chr4_4:74217442-74217461 Msa0702560:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG - chr4_4:74217482-74217501 Msa0702560:CDS 30.0%
GAAGTGGTTCAAATTTCTTA+TGG - chr4_4:74217513-74217532 Msa0702560:CDS 30.0%
ATTGAAGAAATGAGTTCAAG+TGG - chr4_4:74217578-74217597 Msa0702560:CDS 30.0%
AAATGAGTTCAAGTGGAAAA+GGG - chr4_4:74217585-74217604 Msa0702560:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG - chr4_4:74217638-74217657 Msa0702560:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG - chr4_4:74217797-74217816 Msa0702560:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG - chr4_4:74217798-74217817 Msa0702560:CDS 30.0%
! AAAGTGATGGAAAATGACAT+TGG - chr4_4:74217857-74217876 Msa0702560:CDS 30.0%
AATTTGTAAATGAGCTGAAG+AGG - chr4_4:74217969-74217988 Msa0702560:CDS 30.0%
TCAATTAATATTGGAGTCCT+TGG - chr4_4:74218044-74218063 Msa0702560:CDS 30.0%
!!! AATGAATGCATGGTTTTGTA+CGG + chr4_4:74215833-74215852 None:intergenic 30.0%
AGAACTGAATATATGGTTTG+AGG + chr4_4:74215860-74215879 None:intergenic 30.0%
TTATTGATACAAGCACAAGT+TGG + chr4_4:74215892-74215911 None:intergenic 30.0%
CTTGTGCTTGTATCAATAAT+AGG - chr4_4:74215893-74215912 Msa0702560:three_prime_UTR 30.0%
GCTTGTATCAATAATAGGAA+AGG - chr4_4:74215898-74215917 Msa0702560:three_prime_UTR 30.0%
CAGATATGAAGTCAAATTGA+AGG + chr4_4:74216108-74216127 None:intergenic 30.0%
! CAATTTGACTTCATATCTGA+TGG - chr4_4:74216109-74216128 Msa0702560:CDS 30.0%
AATGAGTTCCTTCAAATTCT+TGG + chr4_4:74216206-74216225 None:intergenic 30.0%
! TATATGACCCTTTTCTTCAA+TGG - chr4_4:74216266-74216285 Msa0702560:CDS 30.0%
! ATATGACCCTTTTCTTCAAT+GGG - chr4_4:74216267-74216286 Msa0702560:CDS 30.0%
TCCTAGTAAGTCAAATTCTT+TGG + chr4_4:74216305-74216324 None:intergenic 30.0%
! GAAATTGGCATTGAAGATAT+AGG + chr4_4:74216400-74216419 None:intergenic 30.0%
CAAGAATGATATCTGCTTTA+TGG + chr4_4:74216531-74216550 None:intergenic 30.0%
TAAGGAATATAAAAAGGAGG+AGG + chr4_4:74216595-74216614 None:intergenic 30.0%
! TTGTTTTCAATGTGTGTCAA+TGG + chr4_4:74216848-74216867 None:intergenic 30.0%
TACATGATTCTGTTATGTGA+TGG + chr4_4:74217110-74217129 None:intergenic 30.0%
!! ACTGAATTTTGGTAGAGATT+TGG - chr4_4:74217202-74217221 Msa0702560:intron 30.0%
ATGAATGATATATAAGGTGG+TGG - chr4_4:74217256-74217275 Msa0702560:intron 30.0%
CTATGTCCAATATTGACAAT+TGG - chr4_4:74217293-74217312 Msa0702560:intron 30.0%
TTTGAATTCAGCCAATCAAT+AGG + chr4_4:74217404-74217423 None:intergenic 30.0%
TTATGTATCATTTGGAAGCA+TGG - chr4_4:74217442-74217461 Msa0702560:CDS 30.0%
CAAATGAAGGAAATAGCATT+AGG - chr4_4:74217482-74217501 Msa0702560:CDS 30.0%
GAAGTGGTTCAAATTTCTTA+TGG - chr4_4:74217513-74217532 Msa0702560:CDS 30.0%
ATTGAAGAAATGAGTTCAAG+TGG - chr4_4:74217578-74217597 Msa0702560:CDS 30.0%
AAATGAGTTCAAGTGGAAAA+GGG - chr4_4:74217585-74217604 Msa0702560:CDS 30.0%
GTTCTATCTAACAAAGCTAT+TGG - chr4_4:74217638-74217657 Msa0702560:CDS 30.0%
AGAGTTAAGGTAAATGAGAA+TGG - chr4_4:74217797-74217816 Msa0702560:CDS 30.0%
GAGTTAAGGTAAATGAGAAT+GGG - chr4_4:74217798-74217817 Msa0702560:CDS 30.0%
! AAAGTGATGGAAAATGACAT+TGG - chr4_4:74217857-74217876 Msa0702560:CDS 30.0%
AATTTGTAAATGAGCTGAAG+AGG - chr4_4:74217969-74217988 Msa0702560:CDS 30.0%
TCAATTAATATTGGAGTCCT+TGG - chr4_4:74218044-74218063 Msa0702560:CDS 30.0%
! TTGAGGTGATAATGAATGCA+TGG + chr4_4:74215843-74215862 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG + chr4_4:74215994-74216013 None:intergenic 35.0%
AAAAGGAGTTAACGTCACAA+TGG - chr4_4:74216024-74216043 Msa0702560:CDS 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG + chr4_4:74216056-74216075 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG + chr4_4:74216084-74216103 None:intergenic 35.0%
AAATTGAAGGGTTGAAGGTA+AGG + chr4_4:74216095-74216114 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG + chr4_4:74216100-74216119 None:intergenic 35.0%
ATATCTGATGGCTATGATGA+AGG - chr4_4:74216121-74216140 Msa0702560:CDS 35.0%
! GGTTTTCATGTGAGATAGAT+AGG + chr4_4:74216176-74216195 None:intergenic 35.0%
CTATCTCACATGAAAACCAT+AGG - chr4_4:74216178-74216197 Msa0702560:CDS 35.0%
CCAAAACCCATTGAAGAAAA+GGG + chr4_4:74216276-74216295 None:intergenic 35.0%
TCCAAAACCCATTGAAGAAA+AGG + chr4_4:74216277-74216296 None:intergenic 35.0%
! GCCAAAGAATTTGACTTACT+AGG - chr4_4:74216301-74216320 Msa0702560:CDS 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG + chr4_4:74216381-74216400 None:intergenic 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG + chr4_4:74216436-74216455 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG + chr4_4:74216490-74216509 None:intergenic 35.0%
TCATCAATTCCATAGACCTA+TGG - chr4_4:74216635-74216654 Msa0702560:CDS 35.0%
ACTAATCTTCCATAGGTCTA+TGG + chr4_4:74216647-74216666 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG - chr4_4:74216646-74216665 Msa0702560:CDS 35.0%
TAGACCTATGGAAGATTAGT+GGG - chr4_4:74216647-74216666 Msa0702560:CDS 35.0%
GTTTCTTACGAAAAAATCGG+AGG + chr4_4:74216804-74216823 None:intergenic 35.0%
AAGTAAAAGGATGGAACTGT+TGG + chr4_4:74217320-74217339 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG - chr4_4:74217319-74217338 Msa0702560:intron 35.0%
CAATAGGTGATGAGTCTAAT+TGG + chr4_4:74217388-74217407 None:intergenic 35.0%
TAGACTCATCACCTATTGAT+TGG - chr4_4:74217390-74217409 Msa0702560:intron 35.0%
CTTTAGCATAGAGCAAATGA+AGG - chr4_4:74217469-74217488 Msa0702560:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG - chr4_4:74217497-74217516 Msa0702560:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG - chr4_4:74217529-74217548 Msa0702560:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG - chr4_4:74217584-74217603 Msa0702560:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG + chr4_4:74217629-74217648 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG - chr4_4:74217692-74217711 Msa0702560:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG - chr4_4:74217762-74217781 Msa0702560:CDS 35.0%
AAGAGATTGAGAGTTGCATT+AGG - chr4_4:74217834-74217853 Msa0702560:CDS 35.0%
TGCTAAGAAATGGAGAGAAT+TGG - chr4_4:74217898-74217917 Msa0702560:CDS 35.0%
AATATTGGAGTCCTTGGATT+TGG - chr4_4:74218050-74218069 Msa0702560:CDS 35.0%
TCTCATACAATCCAAATCCA+AGG + chr4_4:74218064-74218083 None:intergenic 35.0%
! TATTTTCCTTATGTCAGTGG+TGG - chr4_4:74218091-74218110 Msa0702560:five_prime_UTR 35.0%
! TTGAGGTGATAATGAATGCA+TGG + chr4_4:74215843-74215862 None:intergenic 35.0%
! GTTTGCTGAATTGAAGCATT+GGG + chr4_4:74215994-74216013 None:intergenic 35.0%
AAAAGGAGTTAACGTCACAA+TGG - chr4_4:74216024-74216043 Msa0702560:CDS 35.0%
!!! CATGGTTTTGGAGATGAAAA+TGG + chr4_4:74216056-74216075 None:intergenic 35.0%
TTGAAGGTAAGGATGATGAT+TGG + chr4_4:74216084-74216103 None:intergenic 35.0%
AAATTGAAGGGTTGAAGGTA+AGG + chr4_4:74216095-74216114 None:intergenic 35.0%
AAGTCAAATTGAAGGGTTGA+AGG + chr4_4:74216100-74216119 None:intergenic 35.0%
ATATCTGATGGCTATGATGA+AGG - chr4_4:74216121-74216140 Msa0702560:CDS 35.0%
! GGTTTTCATGTGAGATAGAT+AGG + chr4_4:74216176-74216195 None:intergenic 35.0%
CTATCTCACATGAAAACCAT+AGG - chr4_4:74216178-74216197 Msa0702560:CDS 35.0%
CCAAAACCCATTGAAGAAAA+GGG + chr4_4:74216276-74216295 None:intergenic 35.0%
TCCAAAACCCATTGAAGAAA+AGG + chr4_4:74216277-74216296 None:intergenic 35.0%
! GCCAAAGAATTTGACTTACT+AGG - chr4_4:74216301-74216320 Msa0702560:CDS 35.0%
!! TAGGAAGCTTTAAAAGTCCA+TGG + chr4_4:74216381-74216400 None:intergenic 35.0%
!! GTATCTTTGAGATCAAGCAA+AGG + chr4_4:74216436-74216455 None:intergenic 35.0%
ATAACCATCTCATAGTAAGC+AGG + chr4_4:74216490-74216509 None:intergenic 35.0%
TCATCAATTCCATAGACCTA+TGG - chr4_4:74216635-74216654 Msa0702560:CDS 35.0%
ACTAATCTTCCATAGGTCTA+TGG + chr4_4:74216647-74216666 None:intergenic 35.0%
ATAGACCTATGGAAGATTAG+TGG - chr4_4:74216646-74216665 Msa0702560:CDS 35.0%
TAGACCTATGGAAGATTAGT+GGG - chr4_4:74216647-74216666 Msa0702560:CDS 35.0%
GTTTCTTACGAAAAAATCGG+AGG + chr4_4:74216804-74216823 None:intergenic 35.0%
AAGTAAAAGGATGGAACTGT+TGG + chr4_4:74217320-74217339 None:intergenic 35.0%
! AACAGTTCCATCCTTTTACT+TGG - chr4_4:74217319-74217338 Msa0702560:intron 35.0%
CAATAGGTGATGAGTCTAAT+TGG + chr4_4:74217388-74217407 None:intergenic 35.0%
TAGACTCATCACCTATTGAT+TGG - chr4_4:74217390-74217409 Msa0702560:intron 35.0%
CTTTAGCATAGAGCAAATGA+AGG - chr4_4:74217469-74217488 Msa0702560:CDS 35.0%
GCATTAGGATTATTAGGAAG+TGG - chr4_4:74217497-74217516 Msa0702560:CDS 35.0%
CTTATGGGTAATCCCTAATA+TGG - chr4_4:74217529-74217548 Msa0702560:CDS 35.0%
GAAATGAGTTCAAGTGGAAA+AGG - chr4_4:74217584-74217603 Msa0702560:CDS 35.0%
TTAGATAGAACTTCCAACTG+TGG + chr4_4:74217629-74217648 None:intergenic 35.0%
!! ACACTTGAAGCATTGTGTTT+AGG - chr4_4:74217692-74217711 Msa0702560:CDS 35.0%
CAAAATATGTTGAGGATGTG+TGG - chr4_4:74217762-74217781 Msa0702560:CDS 35.0%
AAGAGATTGAGAGTTGCATT+AGG - chr4_4:74217834-74217853 Msa0702560:CDS 35.0%
TGCTAAGAAATGGAGAGAAT+TGG - chr4_4:74217898-74217917 Msa0702560:CDS 35.0%
AATATTGGAGTCCTTGGATT+TGG - chr4_4:74218050-74218069 Msa0702560:CDS 35.0%
TCTCATACAATCCAAATCCA+AGG + chr4_4:74218064-74218083 None:intergenic 35.0%
! TATTTTCCTTATGTCAGTGG+TGG - chr4_4:74218091-74218110 Msa0702560:five_prime_UTR 35.0%
GGTTTATGTGACCTTGACTT+GGG + chr4_4:74215973-74215992 None:intergenic 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG + chr4_4:74215995-74216014 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG - chr4_4:74216007-74216026 Msa0702560:CDS 40.0%
! TGATTGGAGATGCATGGTTT+TGG + chr4_4:74216068-74216087 None:intergenic 40.0%
CTTCAAATTCTTGGAGCCTA+TGG + chr4_4:74216197-74216216 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG - chr4_4:74216195-74216214 Msa0702560:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG - chr4_4:74216273-74216292 Msa0702560:CDS 40.0%
TCAATGCCAATTTCTATGCC+AGG - chr4_4:74216406-74216425 Msa0702560:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG - chr4_4:74216407-74216426 Msa0702560:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG + chr4_4:74216458-74216477 None:intergenic 40.0%
CAGGGTCATAAACAAAGGAA+GGG + chr4_4:74216459-74216478 None:intergenic 40.0%
CTATCCTGCTTACTATGAGA+TGG - chr4_4:74216483-74216502 Msa0702560:CDS 40.0%
GTTGGCCCAATTGTCAATAT+TGG + chr4_4:74217302-74217321 None:intergenic 40.0%
! TCCATCCTTTTACTTGGACA+AGG - chr4_4:74217325-74217344 Msa0702560:intron 40.0%
! CCATCCTTTTACTTGGACAA+GGG - chr4_4:74217326-74217345 Msa0702560:intron 40.0%
TACTCCCTTGTCCAAGTAAA+AGG + chr4_4:74217333-74217352 None:intergenic 40.0%
ACATAAATAGCTGACCCTTC+AGG + chr4_4:74217428-74217447 None:intergenic 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG - chr4_4:74217600-74217619 Msa0702560:CDS 40.0%
AGTGAATTGGATACCACAGT+TGG - chr4_4:74217613-74217632 Msa0702560:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG - chr4_4:74217659-74217678 Msa0702560:CDS 40.0%
! GCTTTCTAACACATAGTGGA+TGG - chr4_4:74217663-74217682 Msa0702560:CDS 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG - chr4_4:74217703-74217722 Msa0702560:CDS 40.0%
GAAAGTGGGAATGAGAGTTA+AGG - chr4_4:74217784-74217803 Msa0702560:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG - chr4_4:74217844-74217863 Msa0702560:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG - chr4_4:74217920-74217939 Msa0702560:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG - chr4_4:74217923-74217942 Msa0702560:CDS 40.0%
GGTTTATGTGACCTTGACTT+GGG + chr4_4:74215973-74215992 None:intergenic 40.0%
! CGTTTGCTGAATTGAAGCAT+TGG + chr4_4:74215995-74216014 None:intergenic 40.0%
AGCAAACGTTTGAGCACAAA+AGG - chr4_4:74216007-74216026 Msa0702560:CDS 40.0%
! TGATTGGAGATGCATGGTTT+TGG + chr4_4:74216068-74216087 None:intergenic 40.0%
CTTCAAATTCTTGGAGCCTA+TGG + chr4_4:74216197-74216216 None:intergenic 40.0%
CATAGGCTCCAAGAATTTGA+AGG - chr4_4:74216195-74216214 Msa0702560:CDS 40.0%
!! CCCTTTTCTTCAATGGGTTT+TGG - chr4_4:74216273-74216292 Msa0702560:CDS 40.0%
TCAATGCCAATTTCTATGCC+AGG - chr4_4:74216406-74216425 Msa0702560:CDS 40.0%
CAATGCCAATTTCTATGCCA+GGG - chr4_4:74216407-74216426 Msa0702560:CDS 40.0%
AGGGTCATAAACAAAGGAAG+GGG + chr4_4:74216458-74216477 None:intergenic 40.0%
CAGGGTCATAAACAAAGGAA+GGG + chr4_4:74216459-74216478 None:intergenic 40.0%
CTATCCTGCTTACTATGAGA+TGG - chr4_4:74216483-74216502 Msa0702560:CDS 40.0%
GTTGGCCCAATTGTCAATAT+TGG + chr4_4:74217302-74217321 None:intergenic 40.0%
! TCCATCCTTTTACTTGGACA+AGG - chr4_4:74217325-74217344 Msa0702560:intron 40.0%
! CCATCCTTTTACTTGGACAA+GGG - chr4_4:74217326-74217345 Msa0702560:intron 40.0%
TACTCCCTTGTCCAAGTAAA+AGG + chr4_4:74217333-74217352 None:intergenic 40.0%
ACATAAATAGCTGACCCTTC+AGG + chr4_4:74217428-74217447 None:intergenic 40.0%
!! GAAAAGGGTTGGTAGTGAAT+TGG - chr4_4:74217600-74217619 Msa0702560:CDS 40.0%
AGTGAATTGGATACCACAGT+TGG - chr4_4:74217613-74217632 Msa0702560:CDS 40.0%
! GGTTGCTTTCTAACACATAG+TGG - chr4_4:74217659-74217678 Msa0702560:CDS 40.0%
! GCTTTCTAACACATAGTGGA+TGG - chr4_4:74217663-74217682 Msa0702560:CDS 40.0%
!! ATTGTGTTTAGGAGTGCCTA+TGG - chr4_4:74217703-74217722 Msa0702560:CDS 40.0%
GAAAGTGGGAATGAGAGTTA+AGG - chr4_4:74217784-74217803 Msa0702560:CDS 40.0%
GAGTTGCATTAGGAAAGTGA+TGG - chr4_4:74217844-74217863 Msa0702560:CDS 40.0%
GCTATAGAAGCAGTAAGTCA+TGG - chr4_4:74217920-74217939 Msa0702560:CDS 40.0%
ATAGAAGCAGTAAGTCATGG+TGG - chr4_4:74217923-74217942 Msa0702560:CDS 40.0%
ATGGTTCCATACCCAAGTCA+AGG - chr4_4:74215959-74215978 Msa0702560:three_prime_UTR 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG + chr4_4:74215968-74215987 None:intergenic 45.0%
GGGTTTATGTGACCTTGACT+TGG + chr4_4:74215974-74215993 None:intergenic 45.0%
GGATGATGATTGGAGATGCA+TGG + chr4_4:74216074-74216093 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG - chr4_4:74216124-74216143 Msa0702560:CDS 45.0%
CCAGGGTCATAAACAAAGGA+AGG + chr4_4:74216460-74216479 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG - chr4_4:74216457-74216476 Msa0702560:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG + chr4_4:74216464-74216483 None:intergenic 45.0%
AGTAAGCAGGATAGAAGCCA+GGG + chr4_4:74216477-74216496 None:intergenic 45.0%
TAGTAAGCAGGATAGAAGCC+AGG + chr4_4:74216478-74216497 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG + chr4_4:74216560-74216579 None:intergenic 45.0%
CTTCTACAAGCTAGAAGACC+AGG - chr4_4:74216558-74216577 Msa0702560:CDS 45.0%
GAGGAGGTGAGTAAAAAACC+TGG + chr4_4:74216579-74216598 None:intergenic 45.0%
GTGTCCCACTAATCTTCCAT+AGG + chr4_4:74216654-74216673 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG + chr4_4:74217329-74217348 None:intergenic 45.0%
TGGCTGAATTCAAAGCCTGA+AGG - chr4_4:74217410-74217429 Msa0702560:intron 45.0%
GGCTGAATTCAAAGCCTGAA+GGG - chr4_4:74217411-74217430 Msa0702560:intron 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG - chr4_4:74217589-74217608 Msa0702560:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG + chr4_4:74217722-74217741 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG - chr4_4:74217720-74217739 Msa0702560:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG + chr4_4:74217737-74217756 None:intergenic 45.0%
TGTTGAGGATGTGTGGAAAG+TGG - chr4_4:74217769-74217788 Msa0702560:CDS 45.0%
GTTGAGGATGTGTGGAAAGT+GGG - chr4_4:74217770-74217789 Msa0702560:CDS 45.0%
CACACACTCAAACACCAAAC+AGG - chr4_4:74218156-74218175 Msa0702560:five_prime_UTR 45.0%
ATGGTTCCATACCCAAGTCA+AGG - chr4_4:74215959-74215978 Msa0702560:three_prime_UTR 45.0%
!! ATGTGACCTTGACTTGGGTA+TGG + chr4_4:74215968-74215987 None:intergenic 45.0%
GGGTTTATGTGACCTTGACT+TGG + chr4_4:74215974-74215993 None:intergenic 45.0%
GGATGATGATTGGAGATGCA+TGG + chr4_4:74216074-74216093 None:intergenic 45.0%
TCTGATGGCTATGATGAAGG+TGG - chr4_4:74216124-74216143 Msa0702560:CDS 45.0%
CCAGGGTCATAAACAAAGGA+AGG + chr4_4:74216460-74216479 None:intergenic 45.0%
! CCTTCCTTTGTTTATGACCC+TGG - chr4_4:74216457-74216476 Msa0702560:CDS 45.0%
GAAGCCAGGGTCATAAACAA+AGG + chr4_4:74216464-74216483 None:intergenic 45.0%
AGTAAGCAGGATAGAAGCCA+GGG + chr4_4:74216477-74216496 None:intergenic 45.0%
TAGTAAGCAGGATAGAAGCC+AGG + chr4_4:74216478-74216497 None:intergenic 45.0%
!! CTGGTCTTCTAGCTTGTAGA+AGG + chr4_4:74216560-74216579 None:intergenic 45.0%
CTTCTACAAGCTAGAAGACC+AGG - chr4_4:74216558-74216577 Msa0702560:CDS 45.0%
GAGGAGGTGAGTAAAAAACC+TGG + chr4_4:74216579-74216598 None:intergenic 45.0%
GTGTCCCACTAATCTTCCAT+AGG + chr4_4:74216654-74216673 None:intergenic 45.0%
CCCTTGTCCAAGTAAAAGGA+TGG + chr4_4:74217329-74217348 None:intergenic 45.0%
TGGCTGAATTCAAAGCCTGA+AGG - chr4_4:74217410-74217429 Msa0702560:intron 45.0%
GGCTGAATTCAAAGCCTGAA+GGG - chr4_4:74217411-74217430 Msa0702560:intron 45.0%
GAGTTCAAGTGGAAAAGGGT+TGG - chr4_4:74217589-74217608 Msa0702560:CDS 45.0%
CACTGTGGTATTGCAACCAT+AGG + chr4_4:74217722-74217741 None:intergenic 45.0%
CTATGGTTGCAATACCACAG+TGG - chr4_4:74217720-74217739 Msa0702560:CDS 45.0%
! AAAGGTTGATCAGTCCACTG+TGG + chr4_4:74217737-74217756 None:intergenic 45.0%
TGTTGAGGATGTGTGGAAAG+TGG - chr4_4:74217769-74217788 Msa0702560:CDS 45.0%
GTTGAGGATGTGTGGAAAGT+GGG - chr4_4:74217770-74217789 Msa0702560:CDS 45.0%
! GAAGGTGGCTTTGCTCAAGT+TGG - chr4_4:74216139-74216158 Msa0702560:CDS 50.0%
GGAAGCCCTGGCATAGAAAT+TGG + chr4_4:74216415-74216434 None:intergenic 50.0%
AGATCAAGCAAAGGAAGCCC+TGG + chr4_4:74216427-74216446 None:intergenic 50.0%
! GAAGCACCACCACTGACATA+AGG + chr4_4:74218100-74218119 None:intergenic 50.0%
! GAAGGTGGCTTTGCTCAAGT+TGG - chr4_4:74216139-74216158 Msa0702560:CDS 50.0%
GGAAGCCCTGGCATAGAAAT+TGG + chr4_4:74216415-74216434 None:intergenic 50.0%
AGATCAAGCAAAGGAAGCCC+TGG + chr4_4:74216427-74216446 None:intergenic 50.0%
! GAAGCACCACCACTGACATA+AGG + chr4_4:74218100-74218119 None:intergenic 50.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 74215825 74218175 74215825 ID=Msa0702560;Name=Msa0702560
chr4_4 mRNA 74215825 74218175 74215825 ID=Msa0702560-mRNA-1;Parent=Msa0702560;Name=Msa0702560-mRNA-1;_AED=0.05;_eAED=0.05;_QI=98|1|1|1|1|1|2|178|460
chr4_4 exon 74215825 74216728 74215825 ID=Msa0702560-mRNA-1:exon:23062;Parent=Msa0702560-mRNA-1
chr4_4 exon 74217421 74218175 74217421 ID=Msa0702560-mRNA-1:exon:23061;Parent=Msa0702560-mRNA-1
chr4_4 five_prime_UTR 74218078 74218175 74218078 ID=Msa0702560-mRNA-1:five_prime_utr;Parent=Msa0702560-mRNA-1
chr4_4 CDS 74217421 74218077 74217421 ID=Msa0702560-mRNA-1:cds;Parent=Msa0702560-mRNA-1
chr4_4 CDS 74216003 74216728 74216003 ID=Msa0702560-mRNA-1:cds;Parent=Msa0702560-mRNA-1
chr4_4 three_prime_UTR 74215825 74216002 74215825 ID=Msa0702560-mRNA-1:three_prime_utr;Parent=Msa0702560-mRNA-1
Gene Sequence

>Msa0702560

ATGGAAGAGAGAAAGAGTAGTAGTATGCATGTTTTAATGGTTCCATACCCAAGTCAAGGTCACATAAACCCAATGCTTCAATTCAGCAAACGTTTGAGCACAAAAGGAGTTAACGTCACAATGGTCACAACCATTTTCATCTCCAAAACCATGCATCTCCAATCATCATCCTTACCTTCAACCCTTCAATTTGACTTCATATCTGATGGCTATGATGAAGGTGGCTTTGCTCAAGTTGGCAACATATCAACCTATCTATCTCACATGAAAACCATAGGCTCCAAGAATTTGAAGGAACTCATTCAAAAACATAATGTTTCTGATCACCCTATAGATTGTGTAGTATATGACCCTTTTCTTCAATGGGTTTTGGATGTAGCCAAAGAATTTGACTTACTAGGAGCTGCTTTTTTCACTCAAATGTGTGCTGTCAATTACATGTATTATTATGTTTACCATGGACTTTTAAAGCTTCCTATATCTTCAATGCCAATTTCTATGCCAGGGCTTCCTTTGCTTGATCTCAAAGATACCCCTTCCTTTGTTTATGACCCTGGCTTCTATCCTGCTTACTATGAGATGGTTATGAATCAATATTCTAACATCCATAAAGCAGATATCATTCTTGTCAATTCCTTCTACAAGCTAGAAGACCAGGTGGTGGATTCTATGTCAAAGCTATGTCCAATATTGACAATTGGGCCAACAGTTCCATCCTTTTACTTGGACAAGGGAGTACCAAATGACAAAGACAATGATTTGAATCTCTTCCAATTAGACTCATCACCTATTGATTGGCTGAATTCAAAGCCTGAAGGGTCAGCTATTTATGTATCATTTGGAAGCATGGTATGCTTTAGCATAGAGCAAATGAAGGAAATAGCATTAGGATTATTAGGAAGTGGTTCAAATTTCTTATGGGTAATCCCTAATATGGAGAAAAAGAATATCTCAAAAGAGTTGATTGAAGAAATGAGTTCAAGTGGAAAAGGGTTGGTAGTGAATTGGATACCACAGTTGGAAGTTCTATCTAACAAAGCTATTGGTTGCTTTCTAACACATAGTGGATGGAATTCAACACTTGAAGCATTGTGTTTAGGAGTGCCTATGGTTGCAATACCACAGTGGACTGATCAACCTTTGAATGCAAAATATGTTGAGGATGTGTGGAAAGTGGGAATGAGAGTTAAGGTAAATGAGAATGGGATTGTGACAAAAGAAGAGATTGAGAGTTGCATTAGGAAAGTGATGGAAAATGACATTGGAAGAGAAATGAAAATTAATGCTAAGAAATGGAGAGAATTGGCTATAGAAGCAGTAAGTCATGGTGGCACTTCAGATAACAACATCAATGAATTTGTAAATGAGCTGAAGAGGTCCTAA
Protein sequence

>Msa0702560

MEERKSSSMHVLMVPYPSQGHINPMLQFSKRLSTKGVNVTMVTTIFISKTMHLQSSSLPSTLQFDFISDGYDEGGFAQVGNISTYLSHMKTIGSKNLKELIQKHNVSDHPIDCVVYDPFLQWVLDVAKEFDLLGAAFFTQMCAVNYMYYYVYHGLLKLPISSMPISMPGLPLLDLKDTPSFVYDPGFYPAYYEMVMNQYSNIHKADIILVNSFYKLEDQVVDSMSKLCPILTIGPTVPSFYLDKGVPNDKDNDLNLFQLDSSPIDWLNSKPEGSAIYVSFGSMVCFSIEQMKEIALGLLGSGSNFLWVIPNMEKKNISKELIEEMSSSGKGLVVNWIPQLEVLSNKAIGCFLTHSGWNSTLEALCLGVPMVAIPQWTDQPLNAKYVEDVWKVGMRVKVNENGIVTKEEIESCIRKVMENDIGREMKINAKKWRELAIEAVSHGGTSDNNINEFVNELKRS*