AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0211010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0211010 MtrunA17_Chr2g0310011 90.160 376 5 3 1 372 1 348 0.0 679
Msa0211010 MtrunA17_Chr8g0356501 63.144 388 84 17 1 372 1 345 3.55e-144 412
Msa0211010 MtrunA17_Chr6g0461641 56.098 164 56 2 28 175 35 198 1.87e-52 179
Msa0211010 MtrunA17_Chr2g0321461 55.882 170 53 4 25 173 35 203 1.15e-51 176
Msa0211010 MtrunA17_Chr5g0417521 55.414 157 58 2 28 172 8 164 1.44e-49 170
Msa0211010 MtrunA17_Chr4g0042451 56.410 156 53 3 28 170 10 163 1.46e-49 169
Msa0211010 MtrunA17_Chr5g0409731 53.374 163 58 5 22 168 10 170 3.39e-49 167
Msa0211010 MtrunA17_Chr1g0197171 51.977 177 73 4 14 180 23 197 1.70e-47 163
Msa0211010 MtrunA17_Chr2g0290991 50.877 171 69 4 23 180 27 195 3.33e-44 155
Msa0211010 MtrunA17_Chr7g0254981 54.605 152 54 5 35 178 50 194 9.59e-44 152
Msa0211010 MtrunA17_Chr2g0291021 57.971 138 55 2 35 170 49 185 1.54e-42 151
Msa0211010 MtrunA17_Chr7g0261911 50.370 135 55 3 35 163 262 390 7.23e-36 136
Msa0211010 MtrunA17_Chr7g0274471 43.038 158 76 3 35 186 218 367 3.00e-34 131
Msa0211010 MtrunA17_Chr1g0190301 44.218 147 66 3 25 163 165 303 4.87e-34 129
Msa0211010 MtrunA17_Chr1g0175091 44.526 137 74 1 31 167 254 388 3.40e-31 122
Msa0211010 MtrunA17_Chr7g0258551 37.572 173 102 3 31 198 208 379 3.82e-29 116
Msa0211010 MtrunA17_Chr7g0242521 47.287 129 64 2 35 160 13 140 4.60e-28 110
Msa0211010 MtrunA17_Chr1g0175071 38.961 154 83 3 25 173 167 314 1.26e-23 99.8
Msa0211010 MtrunA17_Chr3g0095611 61.111 54 21 0 35 88 19 72 6.36e-16 75.9
Msa0211010 MtrunA17_Chr6g0479431 56.667 60 26 0 36 95 203 262 2.06e-15 77.0
Msa0211010 MtrunA17_Chr7g0243081 44.444 81 45 0 11 91 47 127 2.56e-15 76.3
Msa0211010 MtrunA17_Chr2g0288601 61.111 54 21 0 36 89 72 125 2.82e-15 72.0
Msa0211010 MtrunA17_Chr1g0210911 56.452 62 22 1 36 92 23 84 3.68e-15 75.9
Msa0211010 MtrunA17_Chr1g0154261 46.667 75 40 0 36 110 127 201 4.78e-15 75.1
Msa0211010 MtrunA17_Chr1g0162931 38.261 115 52 2 36 135 19 129 4.83e-15 74.7
Msa0211010 MtrunA17_Chr8g0366281 58.929 56 23 0 36 91 174 229 5.98e-15 75.5
Msa0211010 MtrunA17_Chr3g0109981 50.704 71 35 0 36 106 275 345 7.85e-15 75.5
Msa0211010 MtrunA17_Chr5g0410741 58.929 56 23 0 36 91 220 275 8.38e-15 75.1
Msa0211010 MtrunA17_Chr1g0175081 49.091 55 28 0 37 91 24 78 9.88e-15 69.7
Msa0211010 MtrunA17_Chr8g0379121 53.571 56 26 0 36 91 112 167 3.75e-14 73.6
Msa0211010 MtrunA17_Chr2g0320231 55.357 56 25 0 36 91 98 153 6.55e-14 72.4
Msa0211010 MtrunA17_Chr7g0258531 35.821 134 67 4 35 158 213 337 6.88e-14 72.0
Msa0211010 MtrunA17_Chr1g0161431 61.818 55 20 1 35 89 200 253 2.46e-13 71.2
Msa0211010 MtrunA17_Chr2g0283951 58.000 50 21 0 36 85 90 139 6.73e-13 69.3
Msa0211010 MtrunA17_Chr4g0031961 52.174 69 31 2 22 89 117 184 6.86e-13 68.9
Msa0211010 MtrunA17_Chr1g0198601 49.315 73 37 0 35 107 211 283 6.98e-13 69.3
Msa0211010 MtrunA17_Chr4g0067981 57.627 59 24 1 31 89 211 268 7.24e-13 70.1
Msa0211010 MtrunA17_Chr5g0402631 51.316 76 34 1 35 110 214 286 1.14e-12 68.6
Msa0211010 MtrunA17_Chr2g0294911 53.333 60 27 1 30 89 206 264 1.15e-12 69.3
Msa0211010 MtrunA17_Chr7g0255711 60.000 55 21 1 35 89 91 144 1.74e-12 67.4
Msa0211010 MtrunA17_Chr4g0009901 52.542 59 27 1 31 89 164 221 9.80e-12 65.1
Msa0211010 MtrunA17_Chr5g0422621 58.182 55 23 0 35 89 198 252 1.31e-11 65.5
Msa0211010 MtrunA17_Chr1g0149841 52.542 59 27 1 31 89 187 244 4.02e-11 64.3
Msa0211010 MtrunA17_Chr4g0009981 53.448 58 26 1 31 88 112 168 4.96e-11 62.8
Msa0211010 MtrunA17_Chr4g0045361 55.172 58 26 0 32 89 271 328 5.02e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0211010 AT1G79430.2 56.122 392 115 16 4 372 1 358 4.91e-121 354
Msa0211010 AT1G79430.1 50.459 327 107 15 67 372 1 293 6.32e-78 242
Msa0211010 AT3G12730.1 70.395 152 37 3 24 167 12 163 8.32e-68 214
Msa0211010 AT4G13640.1 66.667 165 41 3 25 176 27 190 1.39e-65 210
Msa0211010 AT3G24120.1 68.987 158 35 3 24 168 30 186 8.58e-65 208
Msa0211010 AT4G13640.2 65.476 168 41 4 25 176 27 193 1.80e-63 205
Msa0211010 AT3G24120.2 67.702 161 35 4 24 168 30 189 1.14e-62 202
Msa0211010 AT3G04030.3 60.355 169 50 4 24 176 34 201 5.30e-57 191
Msa0211010 AT5G18240.1 60.714 168 51 3 24 176 34 201 3.29e-56 189
Msa0211010 AT5G18240.4 60.714 168 51 3 24 176 34 201 3.29e-56 189
Msa0211010 AT3G04030.2 59.172 169 51 5 24 176 34 200 6.06e-54 183
Msa0211010 AT5G18240.5 59.524 168 51 4 24 176 34 199 6.58e-53 180
Msa0211010 AT3G04030.1 57.396 169 49 5 24 176 34 195 1.45e-50 174
Msa0211010 AT5G18240.2 57.738 168 50 4 24 176 34 195 1.14e-49 172
Msa0211010 AT5G18240.3 57.738 168 50 4 24 176 34 195 1.14e-49 172
Msa0211010 AT1G69580.1 46.341 205 81 6 27 212 26 220 3.04e-49 169
Msa0211010 AT1G69580.2 46.117 206 81 6 27 212 26 221 4.37e-49 169
Msa0211010 AT5G45580.2 46.914 162 68 2 25 168 13 174 2.43e-43 152
Msa0211010 AT2G01060.1 56.934 137 57 2 35 170 15 150 6.66e-43 151
Msa0211010 AT5G45580.1 47.273 165 65 3 29 171 1 165 2.94e-42 149
Msa0211010 AT3G12730.2 62.385 109 33 3 67 167 1 109 3.42e-37 133
Msa0211010 AT3G13040.3 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0211010 AT3G13040.1 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0211010 AT3G13040.2 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0211010 AT5G29000.1 41.520 171 82 5 35 196 188 349 1.35e-32 125
Msa0211010 AT5G29000.3 41.520 171 82 5 35 196 188 349 1.35e-32 125
Msa0211010 AT4G28610.1 44.928 138 59 3 35 163 225 354 2.64e-32 125
Msa0211010 AT5G29000.2 41.520 171 82 5 35 196 231 392 3.07e-32 125
Msa0211010 AT5G06800.1 47.287 129 67 1 35 163 192 319 1.92e-31 122
Msa0211010 AT3G04450.4 41.935 155 73 4 35 180 198 344 3.77e-31 122
Msa0211010 AT3G04450.2 41.935 155 73 4 35 180 198 344 3.77e-31 122
Msa0211010 AT5G06800.2 45.522 134 67 2 35 163 192 324 4.49e-31 122
Msa0211010 AT3G04450.1 41.935 155 73 4 35 180 238 384 6.55e-31 122
Msa0211010 AT3G04030.5 54.762 126 40 4 67 176 1 125 6.35e-30 117
Msa0211010 AT2G20400.1 42.177 147 79 3 35 178 231 374 1.13e-26 110
Msa0211010 AT2G20400.2 41.497 147 81 2 35 178 231 375 3.01e-26 108
Msa0211010 AT3G04030.4 50.794 126 39 5 67 176 1 119 9.94e-24 100
Msa0211010 AT5G18240.6 50.400 125 41 4 67 176 1 119 4.38e-23 98.6
Msa0211010 AT2G06020.1 59.375 64 26 0 28 91 79 142 8.32e-21 92.0
Msa0211010 AT2G01060.2 49.020 102 50 2 70 170 1 101 8.71e-21 90.5
Msa0211010 AT5G06800.3 59.649 57 23 0 35 91 192 248 3.17e-18 84.3
Msa0211010 AT5G29000.4 57.895 57 24 0 35 91 231 287 2.84e-17 82.0
Msa0211010 AT3G04450.3 56.140 57 25 0 35 91 238 294 3.04e-17 82.0
Msa0211010 AT1G14600.1 50.685 73 31 1 21 88 4 76 2.07e-16 78.6
Msa0211010 AT2G40260.1 60.714 56 22 0 36 91 83 138 7.94e-16 79.0
Msa0211010 AT4G04605.1 58.491 53 22 0 36 88 15 67 1.01e-15 75.9
Msa0211010 AT2G42660.1 58.929 56 23 0 36 91 51 106 1.10e-15 76.6
Msa0211010 AT2G02060.2 57.627 59 25 0 34 92 28 86 2.45e-15 75.5
Msa0211010 AT2G02060.1 57.627 59 25 0 34 92 28 86 2.45e-15 75.5
Msa0211010 AT1G32240.2 56.667 60 26 0 36 95 214 273 6.42e-15 75.9
Msa0211010 AT5G16560.1 56.667 60 26 0 36 95 220 279 6.45e-15 75.9
Msa0211010 AT1G32240.1 56.667 60 26 0 36 95 214 273 7.98e-15 75.5
Msa0211010 AT2G38300.1 57.143 56 24 0 36 91 55 110 1.56e-14 74.3
Msa0211010 AT5G42630.2 57.143 56 24 0 36 91 106 161 1.74e-14 72.4
Msa0211010 AT5G42630.1 57.143 56 24 0 36 91 106 161 2.37e-14 73.2
Msa0211010 AT4G17695.1 53.333 60 28 0 36 95 165 224 5.18e-14 72.8
Msa0211010 AT3G46640.2 54.286 70 28 2 23 89 129 197 2.11e-13 70.9
Msa0211010 AT3G46640.1 54.286 70 28 2 23 89 129 197 2.11e-13 70.9
Msa0211010 AT3G46640.3 54.286 70 28 2 23 89 129 197 2.76e-13 70.5
Msa0211010 AT5G59570.2 52.857 70 29 2 23 89 126 194 4.18e-13 69.7
Msa0211010 AT5G59570.1 52.857 70 29 2 23 89 126 194 4.18e-13 69.7
Msa0211010 AT4G04580.1 49.123 57 29 0 36 92 15 71 6.80e-13 66.6
Msa0211010 AT5G05090.1 60.000 55 21 1 35 89 81 134 7.74e-13 68.6
Msa0211010 AT3G10760.1 60.000 55 21 1 35 89 105 158 9.84e-13 68.9
Msa0211010 AT4G37180.1 55.172 58 26 0 37 94 212 269 1.37e-12 68.6
Msa0211010 AT4G37180.2 55.172 58 26 0 37 94 219 276 1.57e-12 68.6
Msa0211010 AT2G40970.1 60.000 55 21 1 35 89 105 158 2.27e-12 67.0
Msa0211010 AT1G49560.1 48.235 85 40 1 35 119 192 272 6.59e-12 66.6
Msa0211010 AT3G16857.3 56.364 55 23 1 35 89 167 220 6.69e-12 67.4
Msa0211010 AT3G16857.2 56.364 55 23 1 35 89 237 290 7.67e-12 67.4
Msa0211010 AT3G16857.1 56.364 55 23 1 35 89 237 290 7.69e-12 67.4
Msa0211010 AT5G58080.1 55.172 58 25 1 32 89 191 247 8.33e-12 67.0
Msa0211010 AT3G25790.1 60.000 50 20 0 40 89 201 250 8.39e-12 66.2
Msa0211010 AT2G01760.3 54.545 55 24 1 35 89 135 188 1.05e-11 65.9
Msa0211010 AT2G01760.1 54.545 55 24 1 35 89 200 253 1.92e-11 65.5
Msa0211010 AT2G01760.2 54.545 55 24 1 35 89 228 281 2.86e-11 65.1
Msa0211010 AT5G44190.1 55.556 54 23 1 35 88 147 199 4.85e-11 64.3
Msa0211010 AT5G44190.2 55.556 54 23 1 35 88 147 199 5.91e-11 63.5
Msa0211010 AT1G13300.1 54.545 55 25 0 35 89 181 235 8.72e-11 63.2

Find 113 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGGACTATTGAAAGAATT+TGG 0.175321 2_1:+51516385 Msa0211010:CDS
GATTTAAGGCTTCAAGATTT+AGG 0.193912 2_1:+51516625 Msa0211010:CDS
TGCTACAACTAATAACTTAA+AGG 0.195092 2_1:+51516330 Msa0211010:CDS
CTTTGTTGTGAAACTCTCTT+AGG 0.204487 2_1:+51516985 Msa0211010:three_prime_UTR
TAATGTGGAGTGATGATTTA+AGG 0.215191 2_1:+51516611 Msa0211010:CDS
AAATCATCACTCCACATTAA+TGG 0.218919 2_1:-51516607 None:intergenic
TTTCTATTACATAGAAATTT+AGG 0.227246 2_1:+51515432 Msa0211010:intron
TTCATAGTTGAAGGCTTCTT+TGG 0.249952 2_1:-51514792 None:intergenic
AACAAATGCGGATGCAAAAT+AGG 0.252816 2_1:-51514720 None:intergenic
AACTTAAAGGGCGTTGTTCT+TGG 0.261188 2_1:+51516343 Msa0211010:CDS
CCACTATAAGGGTTAGTGTT+AGG 0.267537 2_1:-51516571 None:intergenic
GCATATATGCATGATGATCT+AGG 0.285163 2_1:-51516507 None:intergenic
ATTTAAGGCTTCAAGATTTA+GGG 0.292742 2_1:+51516626 Msa0211010:CDS
AATCATCACTCCACATTAAT+GGG 0.299412 2_1:-51516606 None:intergenic
TAAAACTATCATGAGGGTTA+TGG 0.306320 2_1:+51515071 Msa0211010:CDS
GAAATACATGCAAAGTATAT+TGG 0.312337 2_1:+51516267 Msa0211010:CDS
ATTCAATGATCACTCAATTA+AGG 0.327183 2_1:+51515478 Msa0211010:CDS
GTCCAACGAAGACGAGGTTT+TGG 0.340512 2_1:-51514873 None:intergenic
TCAAATTGCACCACCATCAT+TGG 0.344106 2_1:+51516693 Msa0211010:CDS
CCATCTCAAGAGCCATCTTC+AGG 0.344761 2_1:+51515116 Msa0211010:CDS
TGAAGAGATGGCCCTCTTCT+TGG 0.346647 2_1:-51516832 None:intergenic
TATGATTAGTACTGGTACTA+TGG 0.347038 2_1:+51516873 Msa0211010:CDS
CACTATAAGGGTTAGTGTTA+GGG 0.355596 2_1:-51516570 None:intergenic
AAAGCTTATCAGACACTTGC+AGG 0.356175 2_1:+51516292 Msa0211010:CDS
GCTTCCTCTTCGGCTATGAT+TGG 0.358723 2_1:+51515657 Msa0211010:CDS
ACCTCATGGAATGGCTGAAA+TGG 0.378868 2_1:+51516366 Msa0211010:CDS
GAGCTTCAATTCGTAGTTGA+AGG 0.381017 2_1:-51516240 None:intergenic
AAAACTATCATGAGGGTTAT+GGG 0.387308 2_1:+51515072 Msa0211010:CDS
AAAATTTCCCCTTGAAGTAA+AGG 0.387443 2_1:-51516760 None:intergenic
ACTAACCCTTATAGTGGAAA+TGG 0.388772 2_1:+51516577 Msa0211010:CDS
CAGCATCAACAAAACGTTCA+TGG 0.392478 2_1:-51514905 None:intergenic
CAAGGTAGAGGCTCACCATT+TGG 0.401119 2_1:+51516898 Msa0211010:CDS
GATACAAAGCCTTTACTTCA+AGG 0.414154 2_1:+51516751 Msa0211010:CDS
GAAATCATCATGTTCTTATG+AGG 0.415377 2_1:+51517026 Msa0211010:three_prime_UTR
TCATGTGAATTCATAGTTGA+AGG 0.417635 2_1:-51514801 None:intergenic
ACAAATGCGGATGCAAAATA+GGG 0.425308 2_1:-51514719 None:intergenic
CCTAACACTAACCCTTATAG+TGG 0.433462 2_1:+51516571 Msa0211010:CDS
GGCGTTGTTCTTGGACCTCA+TGG 0.435582 2_1:+51516352 Msa0211010:CDS
ATGAGGGTTATGGGTGTAAA+GGG 0.439033 2_1:+51515081 Msa0211010:CDS
GTTGATGCTGTTACTCAGCT+TGG 0.442902 2_1:+51514918 Msa0211010:CDS
ATGCAAAATAGGGAAGAATA+TGG 0.444532 2_1:-51514709 None:intergenic
CATGAGGGTTATGGGTGTAA+AGG 0.448006 2_1:+51515080 Msa0211010:CDS
AGGGACAGCTTCATCATGCT+TGG 0.454830 2_1:+51516645 Msa0211010:CDS
TTTGTTGTGAAACTCTCTTA+GGG 0.456419 2_1:+51516986 Msa0211010:three_prime_UTR
TTTGTATTCAAACCTGAAGA+TGG 0.457979 2_1:-51515128 None:intergenic
TAAGGGTTAGTGTTAGGGTT+AGG 0.458671 2_1:-51516565 None:intergenic
ACGGAATACTGCTTCCTCTT+CGG 0.462582 2_1:+51515647 Msa0211010:CDS
GCTACAACTAATAACTTAAA+GGG 0.463497 2_1:+51516331 Msa0211010:CDS
CATATATGCATGATGATCTA+GGG 0.467621 2_1:-51516506 None:intergenic
TGAAAAGATGTAAAACTAAG+AGG 0.472361 2_1:-51516412 None:intergenic
GTGATCATTGAATTCCTTGT+GGG 0.478768 2_1:-51515468 None:intergenic
ACTTAAGCCTTGGCAAGAAA+AGG 0.483728 2_1:+51516542 Msa0211010:CDS
ATAGTACCAGTACTAATCAT+AGG 0.485418 2_1:-51516871 None:intergenic
CACCACCACCGCCTCCGAAA+AGG 0.487952 2_1:-51516444 None:intergenic
ATAGTTGAAGGCTTCTTTGG+AGG 0.491992 2_1:-51514789 None:intergenic
ATAACTAATTCTCATCCAAA+TGG 0.494435 2_1:-51516913 None:intergenic
GATAGACCCATGTGTGTTCA+AGG 0.496295 2_1:+51514822 Msa0211010:CDS
ATTACATAGAAATTTAGGCT+TGG 0.496295 2_1:+51515437 Msa0211010:intron
CCTCATGGAATGGCTGAAAT+GGG 0.498758 2_1:+51516367 Msa0211010:CDS
ATACAAAGCCTTTACTTCAA+GGG 0.499005 2_1:+51516752 Msa0211010:CDS
TAGTTGAAGGCTTCTTTGGA+GGG 0.504455 2_1:-51514788 None:intergenic
GAAGAGAAAATGGAAGTGAA+TGG 0.505470 2_1:-51514674 None:intergenic
TGAATTTGATCACCTTTGAA+AGG 0.506520 2_1:-51516673 None:intergenic
CGTTAGAATAATTAAAACGT+TGG 0.509154 2_1:-51517070 None:intergenic
ATGGCTCTTGAGATGGTAAA+GGG 0.513730 2_1:-51515109 None:intergenic
CGGTATTCTCTTCACAGAGA+TGG 0.514178 2_1:+51514755 Msa0211010:exon
ATGAGTCCTATGATTAGTAC+TGG 0.525466 2_1:+51516865 Msa0211010:CDS
ACCCAAAACCTCGTCTTCGT+TGG 0.527604 2_1:+51514871 Msa0211010:CDS
GATGGCCCTCTTCTTGGTGA+GGG 0.531501 2_1:-51516826 None:intergenic
TACAAAGCCTTTACTTCAAG+GGG 0.533890 2_1:+51516753 Msa0211010:CDS
TCACTTCCTCTATCCAATGA+TGG 0.535417 2_1:-51516706 None:intergenic
GATGGCTCTTGAGATGGTAA+AGG 0.536000 2_1:-51515110 None:intergenic
TGTTCTTGGACCTCATGGAA+TGG 0.536570 2_1:+51516357 Msa0211010:CDS
AGATGGCCCTCTTCTTGGTG+AGG 0.537995 2_1:-51516827 None:intergenic
AAACGTTGGTTTGCCATGCA+AGG 0.538717 2_1:-51517056 None:intergenic
GCACCACCATCATTGGATAG+AGG 0.539525 2_1:+51516700 Msa0211010:CDS
ATCAATGAGAACTTAAGCCT+TGG 0.540269 2_1:+51516532 Msa0211010:CDS
ATGTGTGTTCAAGGTGACTC+AGG 0.543370 2_1:+51514831 Msa0211010:CDS
GGTACTATGGCACAAGGTAG+AGG 0.548888 2_1:+51516886 Msa0211010:CDS
CCTGAAGATGGCTCTTGAGA+TGG 0.549039 2_1:-51515116 None:intergenic
TGCTTGGATGATCCTTTCAA+AGG 0.557843 2_1:+51516661 Msa0211010:CDS
GATGCTGTTACTCAGCTTGG+AGG 0.559349 2_1:+51514921 Msa0211010:CDS
CAACTACGAATTGAAGCTCA+AGG 0.565636 2_1:+51516244 Msa0211010:CDS
ATGCATACTCATTCATGTTG+CGG 0.570245 2_1:-51515680 None:intergenic
ATTCTTTCAGCATGAAGAGA+TGG 0.571803 2_1:-51516844 None:intergenic
GACACTTGCAGGTGAAAACA+TGG 0.571973 2_1:+51516303 Msa0211010:CDS
CTTTGCTTTATACTTTGAGA+AGG 0.579123 2_1:+51514641 Msa0211010:five_prime_UTR
CTTCAGCTTTAGAACTGCAA+CGG 0.582298 2_1:+51515628 Msa0211010:CDS
ACTTGACCTTCAACAAAACA+TGG 0.583014 2_1:+51516474 Msa0211010:CDS
ATGAGGTATAATGCCTTGCA+TGG 0.587240 2_1:+51517043 Msa0211010:three_prime_UTR
TGAGAATGCTCACATTAACT+AGG 0.597203 2_1:-51517121 None:intergenic
TGAGTCACCTTGAACACACA+TGG 0.598179 2_1:-51514829 None:intergenic
GAAAGACCCTCACCAAGAAG+AGG 0.599610 2_1:+51516820 Msa0211010:CDS
AATGATCACTCAATTAAGGA+TGG 0.602702 2_1:+51515482 Msa0211010:CDS
AAGTATAAAGCAAAGTGAGA+AGG 0.606762 2_1:-51514633 None:intergenic
CTAAGAGAGTTTCACAACAA+AGG 0.608999 2_1:-51516984 None:intergenic
AAAGACCCTCACCAAGAAGA+GGG 0.613710 2_1:+51516821 Msa0211010:CDS
GCTTGGAAAGCAACCCCACA+AGG 0.615422 2_1:+51515454 Msa0211010:CDS
CCACTCCTAAAACTATCATG+AGG 0.619863 2_1:+51515064 Msa0211010:CDS
TGATCATTGAATTCCTTGTG+GGG 0.623211 2_1:-51515467 None:intergenic
AACTACGAATTGAAGCTCAA+GGG 0.632870 2_1:+51516245 Msa0211010:CDS
CACTCCTAAAACTATCATGA+GGG 0.634268 2_1:+51515065 Msa0211010:CDS
CATTTGTTCTTGAATCTCTG+CGG 0.639752 2_1:+51514735 Msa0211010:five_prime_UTR
AGTGATCATTGAATTCCTTG+TGG 0.639862 2_1:-51515469 None:intergenic
TCAACAGTCCAACGAAGACG+AGG 0.644546 2_1:-51514879 None:intergenic
TGTAATCAGGATGCAAATTG+AGG 0.645996 2_1:+51515896 Msa0211010:intron
CCCATTTCAGCCATTCCATG+AGG 0.656331 2_1:-51516367 None:intergenic
CTTCCTCTATCCAATGATGG+TGG 0.659128 2_1:-51516703 None:intergenic
GCGGCCAATCATAGCCGAAG+AGG 0.663510 2_1:-51515661 None:intergenic
AAGACTACATGAGCAACTTG+AGG 0.669000 2_1:+51515926 Msa0211010:CDS
CAGAGATTCAAGAACAAATG+CGG 0.674681 2_1:-51514732 None:intergenic
GAGTCACCTTGAACACACAT+GGG 0.682407 2_1:-51514828 None:intergenic
AGTACTGGTACTATGGCACA+AGG 0.707110 2_1:+51516880 Msa0211010:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTTGTTATTTTTATATT+TGG + chr2_1:51514996-51515015 Msa0211010:intron 10.0%
!!! TTTTAATTTTTTGAAGTTTA+TGG + chr2_1:51515549-51515568 Msa0211010:intron 10.0%
!!! TTTATTATGGTTAATTTTTC+AGG + chr2_1:51515350-51515369 Msa0211010:intron 15.0%
!! GGAAAAACAATAAAAAAAAA+AGG - chr2_1:51515405-51515424 None:intergenic 15.0%
!! TTTCTATTACATAGAAATTT+AGG + chr2_1:51515432-51515451 Msa0211010:intron 15.0%
!! TTAAAATAAGAGATGTATAA+TGG - chr2_1:51515721-51515740 None:intergenic 15.0%
!! ATACTAATTATGTAACAAAT+TGG - chr2_1:51516165-51516184 None:intergenic 15.0%
!!! TACATAATTAGTATTTTCAA+TGG + chr2_1:51516171-51516190 Msa0211010:intron 15.0%
!! CATTACTAAGATATTTATGA+TGG + chr2_1:51515021-51515040 Msa0211010:intron 20.0%
!! TTCTTTACAACACTTTAATA+TGG + chr2_1:51515185-51515204 Msa0211010:intron 20.0%
!!! TGATCTGAATCTTTTTATTA+TGG + chr2_1:51515337-51515356 Msa0211010:intron 20.0%
!! ATAATACATAATCATGTGTA+AGG - chr2_1:51515576-51515595 None:intergenic 20.0%
!! ATTGACAAGATCTTTATATA+TGG + chr2_1:51515602-51515621 Msa0211010:intron 20.0%
!!! TTTGTTTTGAATCTTTTTGT+TGG + chr2_1:51515804-51515823 Msa0211010:intron 20.0%
!!! TTGTTTTGAATCTTTTTGTT+GGG + chr2_1:51515805-51515824 Msa0211010:intron 20.0%
!! TTTATAAGTGCACATATATT+TGG + chr2_1:51515986-51516005 Msa0211010:intron 20.0%
!! TGAATTTAGTTGTATATTTC+AGG + chr2_1:51516207-51516226 Msa0211010:intron 20.0%
! TTTGAGAAGAGAAAGAAAAA+AGG - chr2_1:51514972-51514991 None:intergenic 25.0%
!!! TGGTTTCTTTAATTTTTCAG+AGG + chr2_1:51515041-51515060 Msa0211010:intron 25.0%
!!! TAAAAATTATTTTGCTGCAC+CGG + chr2_1:51515298-51515317 Msa0211010:intron 25.0%
! CTATGTAATAGAAACAACAA+AGG - chr2_1:51515426-51515445 None:intergenic 25.0%
! ATTACATAGAAATTTAGGCT+TGG + chr2_1:51515437-51515456 Msa0211010:intron 25.0%
! ATTCAATGATCACTCAATTA+AGG + chr2_1:51515478-51515497 Msa0211010:CDS 25.0%
!!! TGTTTTGAATCTTTTTGTTG+GGG + chr2_1:51515806-51515825 Msa0211010:intron 25.0%
! AATTGTATATATAGTGCATC+CGG + chr2_1:51516128-51516147 Msa0211010:intron 25.0%
! GAAATACATGCAAAGTATAT+TGG + chr2_1:51516267-51516286 Msa0211010:CDS 25.0%
! TGCTACAACTAATAACTTAA+AGG + chr2_1:51516330-51516349 Msa0211010:CDS 25.0%
! GCTACAACTAATAACTTAAA+GGG + chr2_1:51516331-51516350 Msa0211010:CDS 25.0%
! TGAAAAGATGTAAAACTAAG+AGG - chr2_1:51516415-51516434 None:intergenic 25.0%
!! TTTTTCCATTTCCACTATAA+GGG - chr2_1:51516585-51516604 None:intergenic 25.0%
!!! TTTTTTCCATTTCCACTATA+AGG - chr2_1:51516586-51516605 None:intergenic 25.0%
!! ATTTAAGGCTTCAAGATTTA+GGG + chr2_1:51516626-51516645 Msa0211010:CDS 25.0%
! ATAACTAATTCTCATCCAAA+TGG - chr2_1:51516916-51516935 None:intergenic 25.0%
! CGTTAGAATAATTAAAACGT+TGG - chr2_1:51517073-51517092 None:intergenic 25.0%
!!! TCTCACTTGTATGTTTTTTT+AGG + chr2_1:51517139-51517158 Msa0211010:three_prime_UTR 25.0%
AAGTATAAAGCAAAGTGAGA+AGG - chr2_1:51514636-51514655 None:intergenic 30.0%
! CTTTGCTTTATACTTTGAGA+AGG + chr2_1:51514641-51514660 Msa0211010:five_prime_UTR 30.0%
!! CGTTTTTGAAGAAGAGAAAA+TGG - chr2_1:51514687-51514706 None:intergenic 30.0%
ATGCAAAATAGGGAAGAATA+TGG - chr2_1:51514712-51514731 None:intergenic 30.0%
TCATGTGAATTCATAGTTGA+AGG - chr2_1:51514804-51514823 None:intergenic 30.0%
! ATAACCCTCATGATAGTTTT+AGG - chr2_1:51515072-51515091 None:intergenic 30.0%
TAAAACTATCATGAGGGTTA+TGG + chr2_1:51515071-51515090 Msa0211010:CDS 30.0%
AAAACTATCATGAGGGTTAT+GGG + chr2_1:51515072-51515091 Msa0211010:CDS 30.0%
TTTGTATTCAAACCTGAAGA+TGG - chr2_1:51515131-51515150 None:intergenic 30.0%
CTTGTACAAAAATTTGCAAC+CGG + chr2_1:51515252-51515271 Msa0211010:intron 30.0%
AATGATCACTCAATTAAGGA+TGG + chr2_1:51515482-51515501 Msa0211010:CDS 30.0%
! AGAGATGTATAATGGAAGAA+GGG - chr2_1:51515713-51515732 None:intergenic 30.0%
! AAGAGATGTATAATGGAAGA+AGG - chr2_1:51515714-51515733 None:intergenic 30.0%
!! GTTTTGAATCTTTTTGTTGG+GGG + chr2_1:51515807-51515826 Msa0211010:intron 30.0%
TTGAATTAGTAACTCACACA+AGG + chr2_1:51515869-51515888 Msa0211010:intron 30.0%
! TGCACATATATTTGGAATCA+TGG + chr2_1:51515994-51516013 Msa0211010:intron 30.0%
GTTTGACGAAATTATAACGA+TGG + chr2_1:51516020-51516039 Msa0211010:intron 30.0%
TGAAAAACTATGCACTTTGA+AGG - chr2_1:51516064-51516083 None:intergenic 30.0%
ATGGGACTATTGAAAGAATT+TGG + chr2_1:51516385-51516404 Msa0211010:CDS 30.0%
! TTTCAAGATCTTGACCTTTT+CGG + chr2_1:51516430-51516449 Msa0211010:CDS 30.0%
CATATATGCATGATGATCTA+GGG - chr2_1:51516509-51516528 None:intergenic 30.0%
ATGGAAAAAACCCATTAATG+TGG + chr2_1:51516596-51516615 Msa0211010:CDS 30.0%
AATCATCACTCCACATTAAT+GGG - chr2_1:51516609-51516628 None:intergenic 30.0%
AAATCATCACTCCACATTAA+TGG - chr2_1:51516610-51516629 None:intergenic 30.0%
TAATGTGGAGTGATGATTTA+AGG + chr2_1:51516611-51516630 Msa0211010:CDS 30.0%
! GATTTAAGGCTTCAAGATTT+AGG + chr2_1:51516625-51516644 Msa0211010:CDS 30.0%
TGAATTTGATCACCTTTGAA+AGG - chr2_1:51516676-51516695 None:intergenic 30.0%
ATACAAAGCCTTTACTTCAA+GGG + chr2_1:51516752-51516771 Msa0211010:CDS 30.0%
AAAATTTCCCCTTGAAGTAA+AGG - chr2_1:51516763-51516782 None:intergenic 30.0%
! TTACTTCAAGGGGAAATTTT+AGG + chr2_1:51516763-51516782 Msa0211010:CDS 30.0%
ATAGTACCAGTACTAATCAT+AGG - chr2_1:51516874-51516893 None:intergenic 30.0%
!! TATGATTAGTACTGGTACTA+TGG + chr2_1:51516873-51516892 Msa0211010:CDS 30.0%
! TTTGTTGTGAAACTCTCTTA+GGG + chr2_1:51516986-51517005 Msa0211010:three_prime_UTR 30.0%
GAAATCATCATGTTCTTATG+AGG + chr2_1:51517026-51517045 Msa0211010:three_prime_UTR 30.0%
GAAGAGAAAATGGAAGTGAA+TGG - chr2_1:51514677-51514696 None:intergenic 35.0%
ACAAATGCGGATGCAAAATA+GGG - chr2_1:51514722-51514741 None:intergenic 35.0%
AACAAATGCGGATGCAAAAT+AGG - chr2_1:51514723-51514742 None:intergenic 35.0%
CAGAGATTCAAGAACAAATG+CGG - chr2_1:51514735-51514754 None:intergenic 35.0%
CATTTGTTCTTGAATCTCTG+CGG + chr2_1:51514735-51514754 Msa0211010:five_prime_UTR 35.0%
TTCATAGTTGAAGGCTTCTT+TGG - chr2_1:51514795-51514814 None:intergenic 35.0%
GAGAAGAGAAAGAAAAAAGG+TGG - chr2_1:51514969-51514988 None:intergenic 35.0%
CACTCCTAAAACTATCATGA+GGG + chr2_1:51515065-51515084 Msa0211010:CDS 35.0%
AGACAACATACTACTGTATC+CGG - chr2_1:51515274-51515293 None:intergenic 35.0%
TGATCATTGAATTCCTTGTG+GGG - chr2_1:51515470-51515489 None:intergenic 35.0%
GTGATCATTGAATTCCTTGT+GGG - chr2_1:51515471-51515490 None:intergenic 35.0%
AGTGATCATTGAATTCCTTG+TGG - chr2_1:51515472-51515491 None:intergenic 35.0%
TCAATTAAGGATGGTATGAG+AGG + chr2_1:51515491-51515510 Msa0211010:intron 35.0%
! GTGACACTTCTTTTCTTTCT+AGG + chr2_1:51515513-51515532 Msa0211010:intron 35.0%
ATGCATACTCATTCATGTTG+CGG - chr2_1:51515683-51515702 None:intergenic 35.0%
! GTATAATGGAAGAAGGGAAT+TGG - chr2_1:51515707-51515726 None:intergenic 35.0%
TGTAATCAGGATGCAAATTG+AGG + chr2_1:51515896-51515915 Msa0211010:intron 35.0%
TTGAAGGTTGAACGAAATCA+CGG - chr2_1:51516048-51516067 None:intergenic 35.0%
!! ATCCTTTGAAACCAGTTGTA+CGG + chr2_1:51516098-51516117 Msa0211010:intron 35.0%
!! CAAATTGGATTCTCTAAAGC+CGG - chr2_1:51516150-51516169 None:intergenic 35.0%
AACTACGAATTGAAGCTCAA+GGG + chr2_1:51516245-51516264 Msa0211010:CDS 35.0%
ACTTGACCTTCAACAAAACA+TGG + chr2_1:51516474-51516493 Msa0211010:CDS 35.0%
GCATATATGCATGATGATCT+AGG - chr2_1:51516510-51516529 None:intergenic 35.0%
ATCAATGAGAACTTAAGCCT+TGG + chr2_1:51516532-51516551 Msa0211010:CDS 35.0%
! CACTATAAGGGTTAGTGTTA+GGG - chr2_1:51516573-51516592 None:intergenic 35.0%
! ACTAACCCTTATAGTGGAAA+TGG + chr2_1:51516577-51516596 Msa0211010:CDS 35.0%
GATACAAAGCCTTTACTTCA+AGG + chr2_1:51516751-51516770 Msa0211010:CDS 35.0%
TACAAAGCCTTTACTTCAAG+GGG + chr2_1:51516753-51516772 Msa0211010:CDS 35.0%
ATTCTTTCAGCATGAAGAGA+TGG - chr2_1:51516847-51516866 None:intergenic 35.0%
ATGAGTCCTATGATTAGTAC+TGG + chr2_1:51516865-51516884 Msa0211010:CDS 35.0%
CTAAGAGAGTTTCACAACAA+AGG - chr2_1:51516987-51517006 None:intergenic 35.0%
! CTTTGTTGTGAAACTCTCTT+AGG + chr2_1:51516985-51517004 Msa0211010:three_prime_UTR 35.0%
!!! CTCTCTTAGGGTTTTGAATT+TGG + chr2_1:51516998-51517017 Msa0211010:three_prime_UTR 35.0%
!!! TAGGGTTTTGAATTTGGTCT+TGG + chr2_1:51517004-51517023 Msa0211010:three_prime_UTR 35.0%
TGAGAATGCTCACATTAACT+AGG - chr2_1:51517124-51517143 None:intergenic 35.0%
TAGTTGAAGGCTTCTTTGGA+GGG - chr2_1:51514791-51514810 None:intergenic 40.0%
ATAGTTGAAGGCTTCTTTGG+AGG - chr2_1:51514792-51514811 None:intergenic 40.0%
CAGCATCAACAAAACGTTCA+TGG - chr2_1:51514908-51514927 None:intergenic 40.0%
GGTGAAAGAATAGTACTGTC+AGG - chr2_1:51514948-51514967 None:intergenic 40.0%
!!! CCTCATGATAGTTTTAGGAG+TGG - chr2_1:51515067-51515086 None:intergenic 40.0%
CCACTCCTAAAACTATCATG+AGG + chr2_1:51515064-51515083 Msa0211010:CDS 40.0%
ATGAGGGTTATGGGTGTAAA+GGG + chr2_1:51515081-51515100 Msa0211010:CDS 40.0%
ATGGCTCTTGAGATGGTAAA+GGG - chr2_1:51515112-51515131 None:intergenic 40.0%
AATCATCTCCTACGATGCAA+AGG + chr2_1:51515215-51515234 Msa0211010:intron 40.0%
!! CTTCAGCTTTAGAACTGCAA+CGG + chr2_1:51515628-51515647 Msa0211010:CDS 40.0%
!! GGGTGAGGAGAATTTTGTTT+TGG + chr2_1:51515827-51515846 Msa0211010:intron 40.0%
!! CACACAAGGTTGATGTAATC+AGG + chr2_1:51515883-51515902 Msa0211010:intron 40.0%
AAGACTACATGAGCAACTTG+AGG + chr2_1:51515926-51515945 Msa0211010:CDS 40.0%
! CAACTGGTTTCAAAGGATCT+AGG - chr2_1:51516096-51516115 None:intergenic 40.0%
GAGCTTCAATTCGTAGTTGA+AGG - chr2_1:51516243-51516262 None:intergenic 40.0%
CAACTACGAATTGAAGCTCA+AGG + chr2_1:51516244-51516263 Msa0211010:CDS 40.0%
AAAGCTTATCAGACACTTGC+AGG + chr2_1:51516292-51516311 Msa0211010:CDS 40.0%
!! AACTTAAAGGGCGTTGTTCT+TGG + chr2_1:51516343-51516362 Msa0211010:CDS 40.0%
!! GCTTGTCCATGTTTTGTTGA+AGG - chr2_1:51516483-51516502 None:intergenic 40.0%
ACTTAAGCCTTGGCAAGAAA+AGG + chr2_1:51516542-51516561 Msa0211010:CDS 40.0%
! TAAGGGTTAGTGTTAGGGTT+AGG - chr2_1:51516568-51516587 None:intergenic 40.0%
! CCACTATAAGGGTTAGTGTT+AGG - chr2_1:51516574-51516593 None:intergenic 40.0%
CCTAACACTAACCCTTATAG+TGG + chr2_1:51516571-51516590 Msa0211010:CDS 40.0%
TGCTTGGATGATCCTTTCAA+AGG + chr2_1:51516661-51516680 Msa0211010:CDS 40.0%
TCAAATTGCACCACCATCAT+TGG + chr2_1:51516693-51516712 Msa0211010:CDS 40.0%
TCACTTCCTCTATCCAATGA+TGG - chr2_1:51516709-51516728 None:intergenic 40.0%
ATGAGGTATAATGCCTTGCA+TGG + chr2_1:51517043-51517062 Msa0211010:three_prime_UTR 40.0%
CGGTATTCTCTTCACAGAGA+TGG + chr2_1:51514755-51514774 Msa0211010:exon 45.0%
GATAGACCCATGTGTGTTCA+AGG + chr2_1:51514822-51514841 Msa0211010:CDS 45.0%
GAGTCACCTTGAACACACAT+GGG - chr2_1:51514831-51514850 None:intergenic 45.0%
TGAGTCACCTTGAACACACA+TGG - chr2_1:51514832-51514851 None:intergenic 45.0%
ATGTGTGTTCAAGGTGACTC+AGG + chr2_1:51514831-51514850 Msa0211010:CDS 45.0%
! TCCAACGAAGACGAGGTTTT+GGG - chr2_1:51514875-51514894 None:intergenic 45.0%
GTTGATGCTGTTACTCAGCT+TGG + chr2_1:51514918-51514937 Msa0211010:CDS 45.0%
CATGAGGGTTATGGGTGTAA+AGG + chr2_1:51515080-51515099 Msa0211010:CDS 45.0%
GATGGCTCTTGAGATGGTAA+AGG - chr2_1:51515113-51515132 None:intergenic 45.0%
ACGGAATACTGCTTCCTCTT+CGG + chr2_1:51515647-51515666 Msa0211010:CDS 45.0%
! GAATCTTTTTGTTGGGGGTG+AGG + chr2_1:51515812-51515831 Msa0211010:intron 45.0%
! CACCGTACAACTGGTTTCAA+AGG - chr2_1:51516103-51516122 None:intergenic 45.0%
AATTGACTGCACCGTACAAC+TGG - chr2_1:51516112-51516131 None:intergenic 45.0%
GACACTTGCAGGTGAAAACA+TGG + chr2_1:51516303-51516322 Msa0211010:CDS 45.0%
TGTTCTTGGACCTCATGGAA+TGG + chr2_1:51516357-51516376 Msa0211010:CDS 45.0%
ACCTCATGGAATGGCTGAAA+TGG + chr2_1:51516366-51516385 Msa0211010:CDS 45.0%
CCTCATGGAATGGCTGAAAT+GGG + chr2_1:51516367-51516386 Msa0211010:CDS 45.0%
! CAAGATCTTGACCTTTTCGG+AGG + chr2_1:51516433-51516452 Msa0211010:CDS 45.0%
CTTCCTCTATCCAATGATGG+TGG - chr2_1:51516706-51516725 None:intergenic 45.0%
AAAGACCCTCACCAAGAAGA+GGG + chr2_1:51516821-51516840 Msa0211010:CDS 45.0%
!! AGTACTGGTACTATGGCACA+AGG + chr2_1:51516880-51516899 Msa0211010:CDS 45.0%
!! AAACGTTGGTTTGCCATGCA+AGG - chr2_1:51517059-51517078 None:intergenic 45.0%
!! AAAAAATTAAAAAAAAGATT+TGG - chr2_1:51515541-51515560 None:intergenic 5.0%
ACCCAAAACCTCGTCTTCGT+TGG + chr2_1:51514871-51514890 Msa0211010:CDS 50.0%
! GTCCAACGAAGACGAGGTTT+TGG - chr2_1:51514876-51514895 None:intergenic 50.0%
TCAACAGTCCAACGAAGACG+AGG - chr2_1:51514882-51514901 None:intergenic 50.0%
GATGCTGTTACTCAGCTTGG+AGG + chr2_1:51514921-51514940 Msa0211010:CDS 50.0%
CCTGAAGATGGCTCTTGAGA+TGG - chr2_1:51515119-51515138 None:intergenic 50.0%
CCATCTCAAGAGCCATCTTC+AGG + chr2_1:51515116-51515135 Msa0211010:CDS 50.0%
TTGCTGCACCTTTGCATCGT+AGG - chr2_1:51515226-51515245 None:intergenic 50.0%
GCTTCCTCTTCGGCTATGAT+TGG + chr2_1:51515657-51515676 Msa0211010:CDS 50.0%
CCCATTTCAGCCATTCCATG+AGG - chr2_1:51516370-51516389 None:intergenic 50.0%
! GATCTTGACCTTTTCGGAGG+CGG + chr2_1:51516436-51516455 Msa0211010:CDS 50.0%
! GGTTAGGCCTTTTCTTGCCA+AGG - chr2_1:51516552-51516571 None:intergenic 50.0%
AGGGACAGCTTCATCATGCT+TGG + chr2_1:51516645-51516664 Msa0211010:CDS 50.0%
GCACCACCATCATTGGATAG+AGG + chr2_1:51516700-51516719 Msa0211010:CDS 50.0%
GAAAGACCCTCACCAAGAAG+AGG + chr2_1:51516820-51516839 Msa0211010:CDS 50.0%
TGAAGAGATGGCCCTCTTCT+TGG - chr2_1:51516835-51516854 None:intergenic 50.0%
GGTACTATGGCACAAGGTAG+AGG + chr2_1:51516886-51516905 Msa0211010:CDS 50.0%
CAAGGTAGAGGCTCACCATT+TGG + chr2_1:51516898-51516917 Msa0211010:CDS 50.0%
GCTTGGAAAGCAACCCCACA+AGG + chr2_1:51515454-51515473 Msa0211010:CDS 55.0%
GGCGTTGTTCTTGGACCTCA+TGG + chr2_1:51516352-51516371 Msa0211010:CDS 55.0%
GATGGCCCTCTTCTTGGTGA+GGG - chr2_1:51516829-51516848 None:intergenic 55.0%
AGATGGCCCTCTTCTTGGTG+AGG - chr2_1:51516830-51516849 None:intergenic 55.0%
TCATCTCTCACGCTGCGCAC+CGG - chr2_1:51515320-51515339 None:intergenic 60.0%
GCGGCCAATCATAGCCGAAG+AGG - chr2_1:51515664-51515683 None:intergenic 60.0%
! CTTGACCTTTTCGGAGGCGG+TGG + chr2_1:51516439-51516458 Msa0211010:CDS 60.0%
! GACCTTTTCGGAGGCGGTGG+TGG + chr2_1:51516442-51516461 Msa0211010:CDS 65.0%
CACCACCACCGCCTCCGAAA+AGG - chr2_1:51516447-51516466 None:intergenic 65.0%
!! CTTTTCGGAGGCGGTGGTGG+TGG + chr2_1:51516445-51516464 Msa0211010:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 51514618 51517184 51514618 ID=Msa0211010;Name=Msa0211010
chr2_1 mRNA 51514618 51517184 51514618 ID=Msa0211010-mRNA-1;Parent=Msa0211010;Name=Msa0211010-mRNA-1;_AED=0.01;_eAED=0.01;_QI=156|0.8|0.83|1|0.8|0.83|6|260|372
chr2_1 exon 51514618 51514951 51514618 ID=Msa0211010-mRNA-1:exon:14358;Parent=Msa0211010-mRNA-1
chr2_1 exon 51515061 51515137 51515061 ID=Msa0211010-mRNA-1:exon:14359;Parent=Msa0211010-mRNA-1
chr2_1 exon 51515446 51515503 51515446 ID=Msa0211010-mRNA-1:exon:14360;Parent=Msa0211010-mRNA-1
chr2_1 exon 51515628 51515694 51515628 ID=Msa0211010-mRNA-1:exon:14361;Parent=Msa0211010-mRNA-1
chr2_1 exon 51515905 51515947 51515905 ID=Msa0211010-mRNA-1:exon:14362;Parent=Msa0211010-mRNA-1
chr2_1 exon 51516229 51517184 51516229 ID=Msa0211010-mRNA-1:exon:14363;Parent=Msa0211010-mRNA-1
chr2_1 five_prime_UTR 51514618 51514773 51514618 ID=Msa0211010-mRNA-1:five_prime_utr;Parent=Msa0211010-mRNA-1
chr2_1 CDS 51514774 51514951 51514774 ID=Msa0211010-mRNA-1:cds;Parent=Msa0211010-mRNA-1
chr2_1 CDS 51515061 51515137 51515061 ID=Msa0211010-mRNA-1:cds;Parent=Msa0211010-mRNA-1
chr2_1 CDS 51515446 51515503 51515446 ID=Msa0211010-mRNA-1:cds;Parent=Msa0211010-mRNA-1
chr2_1 CDS 51515628 51515694 51515628 ID=Msa0211010-mRNA-1:cds;Parent=Msa0211010-mRNA-1
chr2_1 CDS 51515905 51515947 51515905 ID=Msa0211010-mRNA-1:cds;Parent=Msa0211010-mRNA-1
chr2_1 CDS 51516229 51516924 51516229 ID=Msa0211010-mRNA-1:cds;Parent=Msa0211010-mRNA-1
chr2_1 three_prime_UTR 51516925 51517184 51516925 ID=Msa0211010-mRNA-1:three_prime_utr;Parent=Msa0211010-mRNA-1
Gene Sequence

>Msa0211010

ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACAACTGACCCAAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTTACTCAGCTTGGAGGACCTGACAAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTAAAGGGTCTTACCCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCGGCTATGATTGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAGAGAAGACTACATGAGCAACTTGAGGTACAAAAACACCTTCAACTACGAATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAAAAAGCTTATCAGACACTTGCAGGTGAAAACATGGCATCTGCTACAACTAATAACTTAAAGGGCGTTGTTCTTGGACCTCATGGAATGGCTGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTTACATCTTTTCAAGATCTTGACCTTTTCGGAGGCGGTGGTGGTGGTGATCAACTTGACCTTCAACAAAACATGGACAAGCAAACCCTAGATCATCATGCATATATGCAAATCAATGAGAACTTAAGCCTTGGCAAGAAAAGGCCTAACCCTAACACTAACCCTTATAGTGGAAATGGAAAAAACCCATTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGGACAGCTTCATCATGCTTGGATGATCCTTTCAAAGGTGATCAAATTCAAATTGCACCACCATCATTGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCCTTTACTTCAAGGGGAAATTTTAGGTGAAAAGAAATTTGATGCATCTATGAATAAACTTGAAAGACCCTCACCAAGAAGAGGGCCATCTCTTCATGCTGAAAGAATGAGTCCTATGATTAGTACTGGTACTATGGCACAAGGTAGAGGCTCACCATTTGGATGA

Protein sequence

>Msa0211010

MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASATTNNLKGVVLGPHGMAEMGLLKEFGSPLSFTSFQDLDLFGGGGGGDQLDLQQNMDKQTLDHHAYMQINENLSLGKKRPNPNTNPYSGNGKNPLMWSDDLRLQDLGTASSCLDDPFKGDQIQIAPPSLDRGSDIETIDIYDTKPLLQGEILGEKKFDASMNKLERPSPRRGPSLHAERMSPMISTGTMAQGRGSPFG*