AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0251670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0251670 MtrunA17_Chr2g0310011 90.160 376 5 3 1 372 1 348 0.0 679
Msa0251670 MtrunA17_Chr8g0356501 63.144 388 84 17 1 372 1 345 3.55e-144 412
Msa0251670 MtrunA17_Chr6g0461641 56.098 164 56 2 28 175 35 198 1.87e-52 179
Msa0251670 MtrunA17_Chr2g0321461 55.882 170 53 4 25 173 35 203 1.15e-51 176
Msa0251670 MtrunA17_Chr5g0417521 55.414 157 58 2 28 172 8 164 1.44e-49 170
Msa0251670 MtrunA17_Chr4g0042451 56.410 156 53 3 28 170 10 163 1.46e-49 169
Msa0251670 MtrunA17_Chr5g0409731 53.374 163 58 5 22 168 10 170 3.39e-49 167
Msa0251670 MtrunA17_Chr1g0197171 51.977 177 73 4 14 180 23 197 1.70e-47 163
Msa0251670 MtrunA17_Chr2g0290991 50.877 171 69 4 23 180 27 195 3.33e-44 155
Msa0251670 MtrunA17_Chr7g0254981 54.605 152 54 5 35 178 50 194 9.59e-44 152
Msa0251670 MtrunA17_Chr2g0291021 57.971 138 55 2 35 170 49 185 1.54e-42 151
Msa0251670 MtrunA17_Chr7g0261911 50.370 135 55 3 35 163 262 390 7.23e-36 136
Msa0251670 MtrunA17_Chr7g0274471 43.038 158 76 3 35 186 218 367 3.00e-34 131
Msa0251670 MtrunA17_Chr1g0190301 44.218 147 66 3 25 163 165 303 4.87e-34 129
Msa0251670 MtrunA17_Chr1g0175091 44.526 137 74 1 31 167 254 388 3.40e-31 122
Msa0251670 MtrunA17_Chr7g0258551 37.572 173 102 3 31 198 208 379 3.82e-29 116
Msa0251670 MtrunA17_Chr7g0242521 47.287 129 64 2 35 160 13 140 4.60e-28 110
Msa0251670 MtrunA17_Chr1g0175071 38.961 154 83 3 25 173 167 314 1.26e-23 99.8
Msa0251670 MtrunA17_Chr3g0095611 61.111 54 21 0 35 88 19 72 6.36e-16 75.9
Msa0251670 MtrunA17_Chr6g0479431 56.667 60 26 0 36 95 203 262 2.06e-15 77.0
Msa0251670 MtrunA17_Chr7g0243081 44.444 81 45 0 11 91 47 127 2.56e-15 76.3
Msa0251670 MtrunA17_Chr2g0288601 61.111 54 21 0 36 89 72 125 2.82e-15 72.0
Msa0251670 MtrunA17_Chr1g0210911 56.452 62 22 1 36 92 23 84 3.68e-15 75.9
Msa0251670 MtrunA17_Chr1g0154261 46.667 75 40 0 36 110 127 201 4.78e-15 75.1
Msa0251670 MtrunA17_Chr1g0162931 38.261 115 52 2 36 135 19 129 4.83e-15 74.7
Msa0251670 MtrunA17_Chr8g0366281 58.929 56 23 0 36 91 174 229 5.98e-15 75.5
Msa0251670 MtrunA17_Chr3g0109981 50.704 71 35 0 36 106 275 345 7.85e-15 75.5
Msa0251670 MtrunA17_Chr5g0410741 58.929 56 23 0 36 91 220 275 8.38e-15 75.1
Msa0251670 MtrunA17_Chr1g0175081 49.091 55 28 0 37 91 24 78 9.88e-15 69.7
Msa0251670 MtrunA17_Chr8g0379121 53.571 56 26 0 36 91 112 167 3.75e-14 73.6
Msa0251670 MtrunA17_Chr2g0320231 55.357 56 25 0 36 91 98 153 6.55e-14 72.4
Msa0251670 MtrunA17_Chr7g0258531 35.821 134 67 4 35 158 213 337 6.88e-14 72.0
Msa0251670 MtrunA17_Chr1g0161431 61.818 55 20 1 35 89 200 253 2.46e-13 71.2
Msa0251670 MtrunA17_Chr2g0283951 58.000 50 21 0 36 85 90 139 6.73e-13 69.3
Msa0251670 MtrunA17_Chr4g0031961 52.174 69 31 2 22 89 117 184 6.86e-13 68.9
Msa0251670 MtrunA17_Chr1g0198601 49.315 73 37 0 35 107 211 283 6.98e-13 69.3
Msa0251670 MtrunA17_Chr4g0067981 57.627 59 24 1 31 89 211 268 7.24e-13 70.1
Msa0251670 MtrunA17_Chr5g0402631 51.316 76 34 1 35 110 214 286 1.14e-12 68.6
Msa0251670 MtrunA17_Chr2g0294911 53.333 60 27 1 30 89 206 264 1.15e-12 69.3
Msa0251670 MtrunA17_Chr7g0255711 60.000 55 21 1 35 89 91 144 1.74e-12 67.4
Msa0251670 MtrunA17_Chr4g0009901 52.542 59 27 1 31 89 164 221 9.80e-12 65.1
Msa0251670 MtrunA17_Chr5g0422621 58.182 55 23 0 35 89 198 252 1.31e-11 65.5
Msa0251670 MtrunA17_Chr1g0149841 52.542 59 27 1 31 89 187 244 4.02e-11 64.3
Msa0251670 MtrunA17_Chr4g0009981 53.448 58 26 1 31 88 112 168 4.96e-11 62.8
Msa0251670 MtrunA17_Chr4g0045361 55.172 58 26 0 32 89 271 328 5.02e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0251670 AT1G79430.2 56.122 392 115 16 4 372 1 358 4.91e-121 354
Msa0251670 AT1G79430.1 50.459 327 107 15 67 372 1 293 6.32e-78 242
Msa0251670 AT3G12730.1 70.395 152 37 3 24 167 12 163 8.32e-68 214
Msa0251670 AT4G13640.1 66.667 165 41 3 25 176 27 190 1.39e-65 210
Msa0251670 AT3G24120.1 68.987 158 35 3 24 168 30 186 8.58e-65 208
Msa0251670 AT4G13640.2 65.476 168 41 4 25 176 27 193 1.80e-63 205
Msa0251670 AT3G24120.2 67.702 161 35 4 24 168 30 189 1.14e-62 202
Msa0251670 AT3G04030.3 60.355 169 50 4 24 176 34 201 5.30e-57 191
Msa0251670 AT5G18240.1 60.714 168 51 3 24 176 34 201 3.29e-56 189
Msa0251670 AT5G18240.4 60.714 168 51 3 24 176 34 201 3.29e-56 189
Msa0251670 AT3G04030.2 59.172 169 51 5 24 176 34 200 6.06e-54 183
Msa0251670 AT5G18240.5 59.524 168 51 4 24 176 34 199 6.58e-53 180
Msa0251670 AT3G04030.1 57.396 169 49 5 24 176 34 195 1.45e-50 174
Msa0251670 AT5G18240.2 57.738 168 50 4 24 176 34 195 1.14e-49 172
Msa0251670 AT5G18240.3 57.738 168 50 4 24 176 34 195 1.14e-49 172
Msa0251670 AT1G69580.1 46.341 205 81 6 27 212 26 220 3.04e-49 169
Msa0251670 AT1G69580.2 46.117 206 81 6 27 212 26 221 4.37e-49 169
Msa0251670 AT5G45580.2 46.914 162 68 2 25 168 13 174 2.43e-43 152
Msa0251670 AT2G01060.1 56.934 137 57 2 35 170 15 150 6.66e-43 151
Msa0251670 AT5G45580.1 47.273 165 65 3 29 171 1 165 2.94e-42 149
Msa0251670 AT3G12730.2 62.385 109 33 3 67 167 1 109 3.42e-37 133
Msa0251670 AT3G13040.3 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0251670 AT3G13040.1 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0251670 AT3G13040.2 44.720 161 75 4 21 167 218 378 1.94e-33 129
Msa0251670 AT5G29000.1 41.520 171 82 5 35 196 188 349 1.35e-32 125
Msa0251670 AT5G29000.3 41.520 171 82 5 35 196 188 349 1.35e-32 125
Msa0251670 AT4G28610.1 44.928 138 59 3 35 163 225 354 2.64e-32 125
Msa0251670 AT5G29000.2 41.520 171 82 5 35 196 231 392 3.07e-32 125
Msa0251670 AT5G06800.1 47.287 129 67 1 35 163 192 319 1.92e-31 122
Msa0251670 AT3G04450.4 41.935 155 73 4 35 180 198 344 3.77e-31 122
Msa0251670 AT3G04450.2 41.935 155 73 4 35 180 198 344 3.77e-31 122
Msa0251670 AT5G06800.2 45.522 134 67 2 35 163 192 324 4.49e-31 122
Msa0251670 AT3G04450.1 41.935 155 73 4 35 180 238 384 6.55e-31 122
Msa0251670 AT3G04030.5 54.762 126 40 4 67 176 1 125 6.35e-30 117
Msa0251670 AT2G20400.1 42.177 147 79 3 35 178 231 374 1.13e-26 110
Msa0251670 AT2G20400.2 41.497 147 81 2 35 178 231 375 3.01e-26 108
Msa0251670 AT3G04030.4 50.794 126 39 5 67 176 1 119 9.94e-24 100
Msa0251670 AT5G18240.6 50.400 125 41 4 67 176 1 119 4.38e-23 98.6
Msa0251670 AT2G06020.1 59.375 64 26 0 28 91 79 142 8.32e-21 92.0
Msa0251670 AT2G01060.2 49.020 102 50 2 70 170 1 101 8.71e-21 90.5
Msa0251670 AT5G06800.3 59.649 57 23 0 35 91 192 248 3.17e-18 84.3
Msa0251670 AT5G29000.4 57.895 57 24 0 35 91 231 287 2.84e-17 82.0
Msa0251670 AT3G04450.3 56.140 57 25 0 35 91 238 294 3.04e-17 82.0
Msa0251670 AT1G14600.1 50.685 73 31 1 21 88 4 76 2.07e-16 78.6
Msa0251670 AT2G40260.1 60.714 56 22 0 36 91 83 138 7.94e-16 79.0
Msa0251670 AT4G04605.1 58.491 53 22 0 36 88 15 67 1.01e-15 75.9
Msa0251670 AT2G42660.1 58.929 56 23 0 36 91 51 106 1.10e-15 76.6
Msa0251670 AT2G02060.2 57.627 59 25 0 34 92 28 86 2.45e-15 75.5
Msa0251670 AT2G02060.1 57.627 59 25 0 34 92 28 86 2.45e-15 75.5
Msa0251670 AT1G32240.2 56.667 60 26 0 36 95 214 273 6.42e-15 75.9
Msa0251670 AT5G16560.1 56.667 60 26 0 36 95 220 279 6.45e-15 75.9
Msa0251670 AT1G32240.1 56.667 60 26 0 36 95 214 273 7.98e-15 75.5
Msa0251670 AT2G38300.1 57.143 56 24 0 36 91 55 110 1.56e-14 74.3
Msa0251670 AT5G42630.2 57.143 56 24 0 36 91 106 161 1.74e-14 72.4
Msa0251670 AT5G42630.1 57.143 56 24 0 36 91 106 161 2.37e-14 73.2
Msa0251670 AT4G17695.1 53.333 60 28 0 36 95 165 224 5.18e-14 72.8
Msa0251670 AT3G46640.2 54.286 70 28 2 23 89 129 197 2.11e-13 70.9
Msa0251670 AT3G46640.1 54.286 70 28 2 23 89 129 197 2.11e-13 70.9
Msa0251670 AT3G46640.3 54.286 70 28 2 23 89 129 197 2.76e-13 70.5
Msa0251670 AT5G59570.2 52.857 70 29 2 23 89 126 194 4.18e-13 69.7
Msa0251670 AT5G59570.1 52.857 70 29 2 23 89 126 194 4.18e-13 69.7
Msa0251670 AT4G04580.1 49.123 57 29 0 36 92 15 71 6.80e-13 66.6
Msa0251670 AT5G05090.1 60.000 55 21 1 35 89 81 134 7.74e-13 68.6
Msa0251670 AT3G10760.1 60.000 55 21 1 35 89 105 158 9.84e-13 68.9
Msa0251670 AT4G37180.1 55.172 58 26 0 37 94 212 269 1.37e-12 68.6
Msa0251670 AT4G37180.2 55.172 58 26 0 37 94 219 276 1.57e-12 68.6
Msa0251670 AT2G40970.1 60.000 55 21 1 35 89 105 158 2.27e-12 67.0
Msa0251670 AT1G49560.1 48.235 85 40 1 35 119 192 272 6.59e-12 66.6
Msa0251670 AT3G16857.3 56.364 55 23 1 35 89 167 220 6.69e-12 67.4
Msa0251670 AT3G16857.2 56.364 55 23 1 35 89 237 290 7.67e-12 67.4
Msa0251670 AT3G16857.1 56.364 55 23 1 35 89 237 290 7.69e-12 67.4
Msa0251670 AT5G58080.1 55.172 58 25 1 32 89 191 247 8.33e-12 67.0
Msa0251670 AT3G25790.1 60.000 50 20 0 40 89 201 250 8.39e-12 66.2
Msa0251670 AT2G01760.3 54.545 55 24 1 35 89 135 188 1.05e-11 65.9
Msa0251670 AT2G01760.1 54.545 55 24 1 35 89 200 253 1.92e-11 65.5
Msa0251670 AT2G01760.2 54.545 55 24 1 35 89 228 281 2.86e-11 65.1
Msa0251670 AT5G44190.1 55.556 54 23 1 35 88 147 199 4.85e-11 64.3
Msa0251670 AT5G44190.2 55.556 54 23 1 35 88 147 199 5.91e-11 63.5
Msa0251670 AT1G13300.1 54.545 55 25 0 35 89 181 235 8.72e-11 63.2

Find 113 sgRNAs with CRISPR-Local

Find 181 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGGACTATTGAAAGAATT+TGG 0.175321 2_2:-41840831 Msa0251670:CDS
GATTTAAGGCTTCAAGATTT+AGG 0.193912 2_2:-41840591 Msa0251670:CDS
TGCTACAACTAATAACTTAA+AGG 0.195092 2_2:-41840886 Msa0251670:CDS
CTTTGTTGTGAAACTCTCTT+AGG 0.204487 2_2:-41840233 Msa0251670:three_prime_UTR
TAATGTGGAGTGATGATTTA+AGG 0.215191 2_2:-41840605 Msa0251670:CDS
AAATCATCACTCCACATTAA+TGG 0.218919 2_2:+41840609 None:intergenic
TTTCTACTACATAGAAATTT+AGG 0.243681 2_2:-41841786 Msa0251670:intron
TTCATAGTTGAAGGCTTCTT+TGG 0.249952 2_2:+41842443 None:intergenic
AACAAATGCGGATGCAAAAT+AGG 0.252816 2_2:+41842515 None:intergenic
AACTTAAAGGGCGTTGTTCT+TGG 0.261188 2_2:-41840873 Msa0251670:CDS
CCACTATAAGGGTTAGTGTT+AGG 0.267537 2_2:+41840645 None:intergenic
GCATATATGCATGATGATCT+AGG 0.285163 2_2:+41840709 None:intergenic
ATTTAAGGCTTCAAGATTTA+GGG 0.292742 2_2:-41840590 Msa0251670:CDS
AATCATCACTCCACATTAAT+GGG 0.299412 2_2:+41840610 None:intergenic
TAAAACTATCATGAGGGTTA+TGG 0.306320 2_2:-41842157 Msa0251670:CDS
GAAATACATGCAAAGTATAT+TGG 0.312337 2_2:-41840949 Msa0251670:CDS
ATTCAATGATCACTCAATTA+AGG 0.327183 2_2:-41841740 Msa0251670:CDS
GTCCAACGAAGACGAGGTTT+TGG 0.340512 2_2:+41842362 None:intergenic
TCAAATTGCACCACCATCAT+TGG 0.344106 2_2:-41840523 Msa0251670:CDS
CCATCTCAAGAGCCATCTTC+AGG 0.344761 2_2:-41842112 Msa0251670:intron
TGAAGAGATGGCCCTCTTCT+TGG 0.346647 2_2:+41840384 None:intergenic
TATGATTAGTACTGGTACTA+TGG 0.347038 2_2:-41840343 Msa0251670:CDS
CACTATAAGGGTTAGTGTTA+GGG 0.355596 2_2:+41840646 None:intergenic
AAAGCTTATCAGACACTTGC+AGG 0.356175 2_2:-41840924 Msa0251670:CDS
GCTTCCTCTTCGGCTATGAT+TGG 0.358723 2_2:-41841559 Msa0251670:CDS
ACCTCATGGAATGGCTGAAA+TGG 0.378868 2_2:-41840850 Msa0251670:CDS
GAGCTTCAATTCGTAGTTGA+AGG 0.381017 2_2:+41840976 None:intergenic
AAAACTATCATGAGGGTTAT+GGG 0.387308 2_2:-41842156 Msa0251670:CDS
AAAATTTCCCCTTGAAGTAA+AGG 0.387443 2_2:+41840456 None:intergenic
ACTAACCCTTATAGTGGAAA+TGG 0.388772 2_2:-41840639 Msa0251670:CDS
CAGCATCAACAAAACGTTCA+TGG 0.398380 2_2:+41842330 None:intergenic
CAAGGTAGAGGCTCACCATT+TGG 0.401119 2_2:-41840318 Msa0251670:CDS
GATACAAAGCCTTTACTTCA+AGG 0.414154 2_2:-41840465 Msa0251670:CDS
GAAATCATCATGTTCTTATG+AGG 0.415377 2_2:-41840192 Msa0251670:three_prime_UTR
TCATGTGAATTCATAGTTGA+AGG 0.417635 2_2:+41842434 None:intergenic
ACAAATGCGGATGCAAAATA+GGG 0.425308 2_2:+41842516 None:intergenic
CCTAACACTAACCCTTATAG+TGG 0.433462 2_2:-41840645 Msa0251670:CDS
GGCGTTGTTCTTGGACCTCA+TGG 0.435582 2_2:-41840864 Msa0251670:CDS
ATGCAAAATAGGGAAGAATA+TGG 0.444532 2_2:+41842526 None:intergenic
AGGGACAGCTTCATCATGCT+TGG 0.454830 2_2:-41840571 Msa0251670:CDS
TTTGTTGTGAAACTCTCTTA+GGG 0.456419 2_2:-41840232 Msa0251670:three_prime_UTR
TTTGTATTCAAACCTGAAGA+TGG 0.457979 2_2:+41842100 None:intergenic
TAAGGGTTAGTGTTAGGGTT+AGG 0.458671 2_2:+41840651 None:intergenic
ACGGAATACTGCTTCCTCTT+CGG 0.462582 2_2:-41841569 Msa0251670:CDS
GCTACAACTAATAACTTAAA+GGG 0.463497 2_2:-41840885 Msa0251670:CDS
GTTGATGCTGTCACTCAGCT+TGG 0.466469 2_2:-41842317 Msa0251670:CDS
CATATATGCATGATGATCTA+GGG 0.467621 2_2:+41840710 None:intergenic
TGAAAAGATGTAAAACTAAG+AGG 0.472361 2_2:+41840804 None:intergenic
GTGATCATTGAATTCCTTGT+GGG 0.478768 2_2:+41841750 None:intergenic
ACTTAAGCCTTGGCAAGAAA+AGG 0.483728 2_2:-41840674 Msa0251670:CDS
ATAGTACCAGTACTAATCAT+AGG 0.485418 2_2:+41840345 None:intergenic
CACCACCACCGCCTCCGAAA+AGG 0.487952 2_2:+41840772 None:intergenic
ACTACATAGAAATTTAGGCT+TGG 0.488751 2_2:-41841781 Msa0251670:intron
ATAGTTGAAGGCTTCTTTGG+AGG 0.491992 2_2:+41842446 None:intergenic
ATAACTAATTCTCATCCAAA+TGG 0.494435 2_2:+41840303 None:intergenic
GATAGACCCATGTGTGTTCA+AGG 0.496295 2_2:-41842413 Msa0251670:CDS
CCTCATGGAATGGCTGAAAT+GGG 0.498758 2_2:-41840849 Msa0251670:CDS
ATACAAAGCCTTTACTTCAA+GGG 0.499005 2_2:-41840464 Msa0251670:CDS
TAGTTGAAGGCTTCTTTGGA+GGG 0.504455 2_2:+41842447 None:intergenic
GAAGAGAAAATGGAAGTGAA+TGG 0.505470 2_2:+41842561 None:intergenic
TGAATTTGATCACCTTTGAA+AGG 0.506520 2_2:+41840543 None:intergenic
CGTTAGAATAATTAAAACGT+TGG 0.509154 2_2:+41840148 None:intergenic
ATGGCTCTTGAGATGGTAAA+GGG 0.513730 2_2:+41842119 None:intergenic
CGGTATTCTCTTCACAGAGA+TGG 0.514178 2_2:-41842480 Msa0251670:exon
GATGCTGTCACTCAGCTTGG+AGG 0.523782 2_2:-41842314 Msa0251670:CDS
ATGAGTCCTATGATTAGTAC+TGG 0.525466 2_2:-41840351 Msa0251670:CDS
ACCCAAAACCTCGTCTTCGT+TGG 0.527604 2_2:-41842364 Msa0251670:CDS
GATGGCCCTCTTCTTGGTGA+GGG 0.531501 2_2:+41840390 None:intergenic
TACAAAGCCTTTACTTCAAG+GGG 0.533890 2_2:-41840463 Msa0251670:CDS
TCACTTCCTCTATCCAATGA+TGG 0.535417 2_2:+41840510 None:intergenic
GATGGCTCTTGAGATGGTAA+AGG 0.536000 2_2:+41842118 None:intergenic
TGTTCTTGGACCTCATGGAA+TGG 0.536570 2_2:-41840859 Msa0251670:CDS
AGATGGCCCTCTTCTTGGTG+AGG 0.537995 2_2:+41840389 None:intergenic
AAACGTTGGTTTGCCATGCA+AGG 0.538717 2_2:+41840162 None:intergenic
CATGAGGGTTATGGGTGTGA+AGG 0.539230 2_2:-41842148 Msa0251670:CDS
GCACCACCATCATTGGATAG+AGG 0.539525 2_2:-41840516 Msa0251670:CDS
ATCAATGAGAACTTAAGCCT+TGG 0.540269 2_2:-41840684 Msa0251670:CDS
ATGTGTGTTCAAGGTGACTC+AGG 0.543370 2_2:-41842404 Msa0251670:CDS
GGTACTATGGCACAAGGTAG+AGG 0.548888 2_2:-41840330 Msa0251670:CDS
CCTGAAGATGGCTCTTGAGA+TGG 0.549039 2_2:+41842112 None:intergenic
ATGAGGGTTATGGGTGTGAA+GGG 0.556178 2_2:-41842147 Msa0251670:CDS
TGCTTGGATGATCCTTTCAA+AGG 0.557843 2_2:-41840555 Msa0251670:CDS
CAACTACGAATTGAAGCTCA+AGG 0.565636 2_2:-41840972 Msa0251670:CDS
ATGCATACTCATTCATGTTG+CGG 0.570245 2_2:+41841536 None:intergenic
ATTCTTTCAGCATGAAGAGA+TGG 0.571803 2_2:+41840372 None:intergenic
GACACTTGCAGGTGAAAACA+TGG 0.571973 2_2:-41840913 Msa0251670:CDS
CTTTGCTTTATACTTTGAGA+AGG 0.579123 2_2:-41842594 Msa0251670:five_prime_UTR
CTTCAGCTTTAGAACTGCAA+CGG 0.582298 2_2:-41841588 Msa0251670:CDS
ACTTGACCTTCAACAAAACA+TGG 0.583014 2_2:-41840742 Msa0251670:CDS
ATGAGGTATAATGCCTTGCA+TGG 0.587240 2_2:-41840175 Msa0251670:three_prime_UTR
TGAGAATGCTCACATTAACT+AGG 0.597203 2_2:+41840097 None:intergenic
TGAGTCACCTTGAACACACA+TGG 0.598179 2_2:+41842406 None:intergenic
GAAAGACCCTCACCAAGAAG+AGG 0.599610 2_2:-41840396 Msa0251670:CDS
AATGATCACTCAATTAAGGA+TGG 0.602702 2_2:-41841736 Msa0251670:intron
AAGTATAAAGCAAAGTGAGA+AGG 0.606762 2_2:+41842602 None:intergenic
CTAAGAGAGTTTCACAACAA+AGG 0.608999 2_2:+41840234 None:intergenic
AAAGACCCTCACCAAGAAGA+GGG 0.613710 2_2:-41840395 Msa0251670:CDS
GCTTGGAAAGCAACCCCACA+AGG 0.615422 2_2:-41841764 Msa0251670:CDS
AAGACTACATGAGCAGCTTG+AGG 0.619777 2_2:-41841290 Msa0251670:intron
CCACTCCTAAAACTATCATG+AGG 0.619863 2_2:-41842164 Msa0251670:CDS
TGATCATTGAATTCCTTGTG+GGG 0.623211 2_2:+41841751 None:intergenic
AACTACGAATTGAAGCTCAA+GGG 0.632870 2_2:-41840971 Msa0251670:CDS
CACTCCTAAAACTATCATGA+GGG 0.634268 2_2:-41842163 Msa0251670:CDS
CATTTGTTCTTGAATCTCTG+CGG 0.639752 2_2:-41842500 Msa0251670:five_prime_UTR
AGTGATCATTGAATTCCTTG+TGG 0.639862 2_2:+41841749 None:intergenic
TCAACAGTCCAACGAAGACG+AGG 0.644546 2_2:+41842356 None:intergenic
TGTAATCAGGATGCAAATTG+AGG 0.645996 2_2:-41841320 Msa0251670:intron
CCCATTTCAGCCATTCCATG+AGG 0.656331 2_2:+41840849 None:intergenic
CTTCCTCTATCCAATGATGG+TGG 0.659128 2_2:+41840513 None:intergenic
GCGGCCAATCATAGCCGAAG+AGG 0.663510 2_2:+41841555 None:intergenic
CAGAGATTCAAGAACAAATG+CGG 0.674681 2_2:+41842503 None:intergenic
GAGTCACCTTGAACACACAT+GGG 0.682407 2_2:+41842407 None:intergenic
AGTACTGGTACTATGGCACA+AGG 0.707110 2_2:-41840336 Msa0251670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTATTTTTTTTATATT+TGG - chr2_2:41840441-41840460 Msa0251670:CDS 0.0%
!! TAAATATAATACATAATCAT+GGG + chr2_2:41841038-41841057 None:intergenic 10.0%
!! ATAAATATAATACATAATCA+TGG + chr2_2:41841039-41841058 None:intergenic 10.0%
!! ATACTAATTATGTAAAAAAT+TGG + chr2_2:41841622-41841641 None:intergenic 10.0%
!! AAAAATTAACCATAACAAAA+AGG + chr2_2:41840804-41840823 None:intergenic 15.0%
!!! TTTTGTTATGGTTAATTTTT+CGG - chr2_2:41840804-41840823 Msa0251670:CDS 15.0%
!! TTAAAATAAGAGATGTATAA+TGG + chr2_2:41841178-41841197 None:intergenic 15.0%
!!! TTTGTTATGGTTAATTTTTC+GGG - chr2_2:41840805-41840824 Msa0251670:CDS 20.0%
!! TTTCTACTACATAGAAATTT+AGG - chr2_2:41840887-41840906 Msa0251670:CDS 20.0%
!! ATTGACAAGATCTTTATATA+TGG - chr2_2:41841059-41841078 Msa0251670:intron 20.0%
!!! TTTGTTTTGAATCTTTTTGT+TGG - chr2_2:41841261-41841280 Msa0251670:intron 20.0%
!!! TTGTTTTGAATCTTTTTGTT+GGG - chr2_2:41841262-41841281 Msa0251670:intron 20.0%
!! TTTATAAGTGCACATATATT+TGG - chr2_2:41841443-41841462 Msa0251670:intron 20.0%
!! TGAATTTAGTTGTATATTTC+AGG - chr2_2:41841664-41841683 Msa0251670:intron 20.0%
! CACTACTAAGATATTTATGA+TGG - chr2_2:41840466-41840485 Msa0251670:CDS 25.0%
!!! TGGTTTCTTAAATTTTTCAG+AGG - chr2_2:41840486-41840505 Msa0251670:CDS 25.0%
! TTCTTTACAACACTTTACTA+TGG - chr2_2:41840639-41840658 Msa0251670:CDS 25.0%
! AAACAACATATTACTGTATG+CGG + chr2_2:41840728-41840747 None:intergenic 25.0%
! ATTCAATGATCACTCAATTA+AGG - chr2_2:41840933-41840952 Msa0251670:CDS 25.0%
! ATAATACATAATCATGGGTA+AGG + chr2_2:41841033-41841052 None:intergenic 25.0%
!!! TGTTTTGAATCTTTTTGTTG+GGG - chr2_2:41841263-41841282 Msa0251670:intron 25.0%
! AATTGTATATATAGTGCATC+CGG - chr2_2:41841585-41841604 Msa0251670:CDS 25.0%
! GAAATACATGCAAAGTATAT+TGG - chr2_2:41841724-41841743 Msa0251670:intron 25.0%
! TGCTACAACTAATAACTTAA+AGG - chr2_2:41841787-41841806 Msa0251670:intron 25.0%
! GCTACAACTAATAACTTAAA+GGG - chr2_2:41841788-41841807 Msa0251670:intron 25.0%
! TGAAAAGATGTAAAACTAAG+AGG + chr2_2:41841872-41841891 None:intergenic 25.0%
!! TTTTTCCATTTCCACTATAA+GGG + chr2_2:41842042-41842061 None:intergenic 25.0%
!!! TTTTTTCCATTTCCACTATA+AGG + chr2_2:41842043-41842062 None:intergenic 25.0%
!! ATTTAAGGCTTCAAGATTTA+GGG - chr2_2:41842083-41842102 Msa0251670:intron 25.0%
! ATAACTAATTCTCATCCAAA+TGG + chr2_2:41842373-41842392 None:intergenic 25.0%
! CGTTAGAATAATTAAAACGT+TGG + chr2_2:41842528-41842547 None:intergenic 25.0%
!!! TCTCACTTGTATGTTTTTTT+AGG - chr2_2:41842594-41842613 Msa0251670:five_prime_UTR 25.0%
AAGTATAAAGCAAAGTGAGA+AGG + chr2_2:41840074-41840093 None:intergenic 30.0%
! CTTTGCTTTATACTTTGAGA+AGG - chr2_2:41840079-41840098 Msa0251670:three_prime_UTR 30.0%
!! CGTTTTTGAAGAAGAGAAAA+TGG + chr2_2:41840125-41840144 None:intergenic 30.0%
ATGCAAAATAGGGAAGAATA+TGG + chr2_2:41840150-41840169 None:intergenic 30.0%
TCATGTGAATTCATAGTTGA+AGG + chr2_2:41840242-41840261 None:intergenic 30.0%
TGTGAGAAGAGAAAGAAAAA+AGG + chr2_2:41840410-41840429 None:intergenic 30.0%
! ATAACCCTCATGATAGTTTT+AGG + chr2_2:41840517-41840536 None:intergenic 30.0%
TAAAACTATCATGAGGGTTA+TGG - chr2_2:41840516-41840535 Msa0251670:CDS 30.0%
AAAACTATCATGAGGGTTAT+GGG - chr2_2:41840517-41840536 Msa0251670:CDS 30.0%
TTTGTATTCAAACCTGAAGA+TGG + chr2_2:41840576-41840595 None:intergenic 30.0%
! GATCTGAATCCTTTTTGTTA+TGG - chr2_2:41840792-41840811 Msa0251670:CDS 30.0%
ACTACATAGAAATTTAGGCT+TGG - chr2_2:41840892-41840911 Msa0251670:CDS 30.0%
AATGATCACTCAATTAAGGA+TGG - chr2_2:41840937-41840956 Msa0251670:CDS 30.0%
! AGAGATGTATAATGGAAGAA+GGG + chr2_2:41841170-41841189 None:intergenic 30.0%
! AAGAGATGTATAATGGAAGA+AGG + chr2_2:41841171-41841190 None:intergenic 30.0%
!! GTTTTGAATCTTTTTGTTGG+GGG - chr2_2:41841264-41841283 Msa0251670:intron 30.0%
!!! TTTGTTTTGGAATGTATGTG+TGG - chr2_2:41841297-41841316 Msa0251670:CDS 30.0%
TTGAATTAGTAACTCACACA+AGG - chr2_2:41841326-41841345 Msa0251670:intron 30.0%
! TGCACATATATTTGGAATCA+TGG - chr2_2:41841451-41841470 Msa0251670:intron 30.0%
GTTTGACGAAATTATAACGA+TGG - chr2_2:41841477-41841496 Msa0251670:intron 30.0%
TGAAAAACTATGCACTTTGA+AGG + chr2_2:41841521-41841540 None:intergenic 30.0%
!! AAAATTGGATTCTCTAAAGC+CGG + chr2_2:41841607-41841626 None:intergenic 30.0%
ATGGGACTATTGAAAGAATT+TGG - chr2_2:41841842-41841861 Msa0251670:intron 30.0%
! TTTCAAGATCTTGACCTTTT+CGG - chr2_2:41841887-41841906 Msa0251670:intron 30.0%
CATATATGCATGATGATCTA+GGG + chr2_2:41841966-41841985 None:intergenic 30.0%
ATGGAAAAAACCCATTAATG+TGG - chr2_2:41842053-41842072 Msa0251670:intron 30.0%
AATCATCACTCCACATTAAT+GGG + chr2_2:41842066-41842085 None:intergenic 30.0%
AAATCATCACTCCACATTAA+TGG + chr2_2:41842067-41842086 None:intergenic 30.0%
TAATGTGGAGTGATGATTTA+AGG - chr2_2:41842068-41842087 Msa0251670:intron 30.0%
! GATTTAAGGCTTCAAGATTT+AGG - chr2_2:41842082-41842101 Msa0251670:intron 30.0%
TGAATTTGATCACCTTTGAA+AGG + chr2_2:41842133-41842152 None:intergenic 30.0%
ATACAAAGCCTTTACTTCAA+GGG - chr2_2:41842209-41842228 Msa0251670:intron 30.0%
AAAATTTCCCCTTGAAGTAA+AGG + chr2_2:41842220-41842239 None:intergenic 30.0%
! TTACTTCAAGGGGAAATTTT+AGG - chr2_2:41842220-41842239 Msa0251670:intron 30.0%
ATAGTACCAGTACTAATCAT+AGG + chr2_2:41842331-41842350 None:intergenic 30.0%
!! TATGATTAGTACTGGTACTA+TGG - chr2_2:41842330-41842349 Msa0251670:CDS 30.0%
! TTTGTTGTGAAACTCTCTTA+GGG - chr2_2:41842441-41842460 Msa0251670:CDS 30.0%
GAAATCATCATGTTCTTATG+AGG - chr2_2:41842481-41842500 Msa0251670:exon 30.0%
GAAGAGAAAATGGAAGTGAA+TGG + chr2_2:41840115-41840134 None:intergenic 35.0%
ACAAATGCGGATGCAAAATA+GGG + chr2_2:41840160-41840179 None:intergenic 35.0%
AACAAATGCGGATGCAAAAT+AGG + chr2_2:41840161-41840180 None:intergenic 35.0%
CAGAGATTCAAGAACAAATG+CGG + chr2_2:41840173-41840192 None:intergenic 35.0%
CATTTGTTCTTGAATCTCTG+CGG - chr2_2:41840173-41840192 Msa0251670:three_prime_UTR 35.0%
TTCATAGTTGAAGGCTTCTT+TGG + chr2_2:41840233-41840252 None:intergenic 35.0%
GAGAAGAGAAAGAAAAAAGG+TGG + chr2_2:41840407-41840426 None:intergenic 35.0%
CACTCCTAAAACTATCATGA+GGG - chr2_2:41840510-41840529 Msa0251670:CDS 35.0%
TGATCATTGAATTCCTTGTG+GGG + chr2_2:41840925-41840944 None:intergenic 35.0%
GTGATCATTGAATTCCTTGT+GGG + chr2_2:41840926-41840945 None:intergenic 35.0%
AGTGATCATTGAATTCCTTG+TGG + chr2_2:41840927-41840946 None:intergenic 35.0%
TCAATTAAGGATGGTATGAG+AGG - chr2_2:41840946-41840965 Msa0251670:CDS 35.0%
ATGCATACTCATTCATGTTG+CGG + chr2_2:41841140-41841159 None:intergenic 35.0%
! GTATAATGGAAGAAGGGAAT+TGG + chr2_2:41841164-41841183 None:intergenic 35.0%
TGTAATCAGGATGCAAATTG+AGG - chr2_2:41841353-41841372 Msa0251670:intron 35.0%
TTGAAGGTTGAACGAAATCA+CGG + chr2_2:41841505-41841524 None:intergenic 35.0%
!! ATCCTTTGAAACCAGTTGTA+CGG - chr2_2:41841555-41841574 Msa0251670:CDS 35.0%
AACTACGAATTGAAGCTCAA+GGG - chr2_2:41841702-41841721 Msa0251670:intron 35.0%
ACTTGACCTTCAACAAAACA+TGG - chr2_2:41841931-41841950 Msa0251670:intron 35.0%
GCATATATGCATGATGATCT+AGG + chr2_2:41841967-41841986 None:intergenic 35.0%
ATCAATGAGAACTTAAGCCT+TGG - chr2_2:41841989-41842008 Msa0251670:intron 35.0%
! CACTATAAGGGTTAGTGTTA+GGG + chr2_2:41842030-41842049 None:intergenic 35.0%
! ACTAACCCTTATAGTGGAAA+TGG - chr2_2:41842034-41842053 Msa0251670:intron 35.0%
GATACAAAGCCTTTACTTCA+AGG - chr2_2:41842208-41842227 Msa0251670:intron 35.0%
TACAAAGCCTTTACTTCAAG+GGG - chr2_2:41842210-41842229 Msa0251670:intron 35.0%
ATTCTTTCAGCATGAAGAGA+TGG + chr2_2:41842304-41842323 None:intergenic 35.0%
ATGAGTCCTATGATTAGTAC+TGG - chr2_2:41842322-41842341 Msa0251670:CDS 35.0%
CTAAGAGAGTTTCACAACAA+AGG + chr2_2:41842442-41842461 None:intergenic 35.0%
! CTTTGTTGTGAAACTCTCTT+AGG - chr2_2:41842440-41842459 Msa0251670:CDS 35.0%
!!! CTCTCTTAGGGTTTTGAATT+TGG - chr2_2:41842453-41842472 Msa0251670:CDS 35.0%
!!! TAGGGTTTTGAATTTGGTCT+TGG - chr2_2:41842459-41842478 Msa0251670:CDS 35.0%
TGAGAATGCTCACATTAACT+AGG + chr2_2:41842579-41842598 None:intergenic 35.0%
TAGTTGAAGGCTTCTTTGGA+GGG + chr2_2:41840229-41840248 None:intergenic 40.0%
ATAGTTGAAGGCTTCTTTGG+AGG + chr2_2:41840230-41840249 None:intergenic 40.0%
CAGCATCAACAAAACGTTCA+TGG + chr2_2:41840346-41840365 None:intergenic 40.0%
GGTGAAAGAATAGTACTGTC+AGG + chr2_2:41840386-41840405 None:intergenic 40.0%
!!! CCTCATGATAGTTTTAGGAG+TGG + chr2_2:41840512-41840531 None:intergenic 40.0%
CCACTCCTAAAACTATCATG+AGG - chr2_2:41840509-41840528 Msa0251670:CDS 40.0%
ATGGCTCTTGAGATGGTAAA+GGG + chr2_2:41840557-41840576 None:intergenic 40.0%
!! CTTCAGCTTTAGAACTGCAA+CGG - chr2_2:41841085-41841104 Msa0251670:intron 40.0%
!! GGGTGAGGAGATTTTTGTTT+TGG - chr2_2:41841284-41841303 Msa0251670:intron 40.0%
!! CACACAAGGTTGATGTAATC+AGG - chr2_2:41841340-41841359 Msa0251670:intron 40.0%
! CAACTGGTTTCAAAGGATCT+AGG + chr2_2:41841553-41841572 None:intergenic 40.0%
GAGCTTCAATTCGTAGTTGA+AGG + chr2_2:41841700-41841719 None:intergenic 40.0%
CAACTACGAATTGAAGCTCA+AGG - chr2_2:41841701-41841720 Msa0251670:intron 40.0%
AAAGCTTATCAGACACTTGC+AGG - chr2_2:41841749-41841768 Msa0251670:CDS 40.0%
!! AACTTAAAGGGCGTTGTTCT+TGG - chr2_2:41841800-41841819 Msa0251670:intron 40.0%
!! GCTTGTCCATGTTTTGTTGA+AGG + chr2_2:41841940-41841959 None:intergenic 40.0%
ACTTAAGCCTTGGCAAGAAA+AGG - chr2_2:41841999-41842018 Msa0251670:intron 40.0%
! TAAGGGTTAGTGTTAGGGTT+AGG + chr2_2:41842025-41842044 None:intergenic 40.0%
! CCACTATAAGGGTTAGTGTT+AGG + chr2_2:41842031-41842050 None:intergenic 40.0%
CCTAACACTAACCCTTATAG+TGG - chr2_2:41842028-41842047 Msa0251670:intron 40.0%
TGCTTGGATGATCCTTTCAA+AGG - chr2_2:41842118-41842137 Msa0251670:CDS 40.0%
TCAAATTGCACCACCATCAT+TGG - chr2_2:41842150-41842169 Msa0251670:CDS 40.0%
TCACTTCCTCTATCCAATGA+TGG + chr2_2:41842166-41842185 None:intergenic 40.0%
ATGAGGTATAATGCCTTGCA+TGG - chr2_2:41842498-41842517 Msa0251670:five_prime_UTR 40.0%
CGGTATTCTCTTCACAGAGA+TGG - chr2_2:41840193-41840212 Msa0251670:three_prime_UTR 45.0%
GATAGACCCATGTGTGTTCA+AGG - chr2_2:41840260-41840279 Msa0251670:three_prime_UTR 45.0%
GAGTCACCTTGAACACACAT+GGG + chr2_2:41840269-41840288 None:intergenic 45.0%
TGAGTCACCTTGAACACACA+TGG + chr2_2:41840270-41840289 None:intergenic 45.0%
ATGTGTGTTCAAGGTGACTC+AGG - chr2_2:41840269-41840288 Msa0251670:three_prime_UTR 45.0%
! TCCAACGAAGACGAGGTTTT+GGG + chr2_2:41840313-41840332 None:intergenic 45.0%
ATGAGGGTTATGGGTGTGAA+GGG - chr2_2:41840526-41840545 Msa0251670:CDS 45.0%
GATGGCTCTTGAGATGGTAA+AGG + chr2_2:41840558-41840577 None:intergenic 45.0%
ACGGAATACTGCTTCCTCTT+CGG - chr2_2:41841104-41841123 Msa0251670:intron 45.0%
! GAATCTTTTTGTTGGGGGTG+AGG - chr2_2:41841269-41841288 Msa0251670:intron 45.0%
AAGACTACATGAGCAGCTTG+AGG - chr2_2:41841383-41841402 Msa0251670:intron 45.0%
! CACCGTACAACTGGTTTCAA+AGG + chr2_2:41841560-41841579 None:intergenic 45.0%
AATTGACTGCACCGTACAAC+TGG + chr2_2:41841569-41841588 None:intergenic 45.0%
GACACTTGCAGGTGAAAACA+TGG - chr2_2:41841760-41841779 Msa0251670:CDS 45.0%
TGTTCTTGGACCTCATGGAA+TGG - chr2_2:41841814-41841833 Msa0251670:intron 45.0%
ACCTCATGGAATGGCTGAAA+TGG - chr2_2:41841823-41841842 Msa0251670:intron 45.0%
CCTCATGGAATGGCTGAAAT+GGG - chr2_2:41841824-41841843 Msa0251670:intron 45.0%
! CAAGATCTTGACCTTTTCGG+AGG - chr2_2:41841890-41841909 Msa0251670:intron 45.0%
CTTCCTCTATCCAATGATGG+TGG + chr2_2:41842163-41842182 None:intergenic 45.0%
AAAGACCCTCACCAAGAAGA+GGG - chr2_2:41842278-41842297 Msa0251670:intron 45.0%
!! AGTACTGGTACTATGGCACA+AGG - chr2_2:41842337-41842356 Msa0251670:CDS 45.0%
!! AAACGTTGGTTTGCCATGCA+AGG + chr2_2:41842514-41842533 None:intergenic 45.0%
!! AGAAAAAATAAATAAATAAA+GGG + chr2_2:41840861-41840880 None:intergenic 5.0%
!! AAGAAAAAATAAATAAATAA+AGG + chr2_2:41840862-41840881 None:intergenic 5.0%
!! AAAATAAAAAATAAAAGATA+TGG + chr2_2:41840996-41841015 None:intergenic 5.0%
ACCCAAAACCTCGTCTTCGT+TGG - chr2_2:41840309-41840328 Msa0251670:exon 50.0%
! GTCCAACGAAGACGAGGTTT+TGG + chr2_2:41840314-41840333 None:intergenic 50.0%
TCAACAGTCCAACGAAGACG+AGG + chr2_2:41840320-41840339 None:intergenic 50.0%
GTTGATGCTGTCACTCAGCT+TGG - chr2_2:41840356-41840375 Msa0251670:CDS 50.0%
CATGAGGGTTATGGGTGTGA+AGG - chr2_2:41840525-41840544 Msa0251670:CDS 50.0%
CCTGAAGATGGCTCTTGAGA+TGG + chr2_2:41840564-41840583 None:intergenic 50.0%
CCATCTCAAGAGCCATCTTC+AGG - chr2_2:41840561-41840580 Msa0251670:CDS 50.0%
GATCATCTCCTACGATGCAG+AGG - chr2_2:41840669-41840688 Msa0251670:CDS 50.0%
TCATCTCTCACGTTGCGCAT+CGG + chr2_2:41840774-41840793 None:intergenic 50.0%
GCTTCCTCTTCGGCTATGAT+TGG - chr2_2:41841114-41841133 Msa0251670:intron 50.0%
CCCATTTCAGCCATTCCATG+AGG + chr2_2:41841827-41841846 None:intergenic 50.0%
! GATCTTGACCTTTTCGGAGG+CGG - chr2_2:41841893-41841912 Msa0251670:intron 50.0%
! GGTTAGGCCTTTTCTTGCCA+AGG + chr2_2:41842009-41842028 None:intergenic 50.0%
AGGGACAGCTTCATCATGCT+TGG - chr2_2:41842102-41842121 Msa0251670:intron 50.0%
GCACCACCATCATTGGATAG+AGG - chr2_2:41842157-41842176 Msa0251670:CDS 50.0%
GAAAGACCCTCACCAAGAAG+AGG - chr2_2:41842277-41842296 Msa0251670:intron 50.0%
TGAAGAGATGGCCCTCTTCT+TGG + chr2_2:41842292-41842311 None:intergenic 50.0%
GGTACTATGGCACAAGGTAG+AGG - chr2_2:41842343-41842362 Msa0251670:CDS 50.0%
CAAGGTAGAGGCTCACCATT+TGG - chr2_2:41842355-41842374 Msa0251670:CDS 50.0%
GATGCTGTCACTCAGCTTGG+AGG - chr2_2:41840359-41840378 Msa0251670:CDS 55.0%
TTGCTGCACCTCTGCATCGT+AGG + chr2_2:41840680-41840699 None:intergenic 55.0%
GCTTGGAAAGCAACCCCACA+AGG - chr2_2:41840909-41840928 Msa0251670:CDS 55.0%
GGCGTTGTTCTTGGACCTCA+TGG - chr2_2:41841809-41841828 Msa0251670:intron 55.0%
GATGGCCCTCTTCTTGGTGA+GGG + chr2_2:41842286-41842305 None:intergenic 55.0%
AGATGGCCCTCTTCTTGGTG+AGG + chr2_2:41842287-41842306 None:intergenic 55.0%
GCGGCCAATCATAGCCGAAG+AGG + chr2_2:41841121-41841140 None:intergenic 60.0%
! CTTGACCTTTTCGGAGGCGG+TGG - chr2_2:41841896-41841915 Msa0251670:intron 60.0%
! GACCTTTTCGGAGGCGGTGG+TGG - chr2_2:41841899-41841918 Msa0251670:intron 65.0%
CACCACCACCGCCTCCGAAA+AGG + chr2_2:41841904-41841923 None:intergenic 65.0%
!! CTTTTCGGAGGCGGTGGTGG+TGG - chr2_2:41841902-41841921 Msa0251670:intron 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 41840056 41842639 41840056 ID=Msa0251670;Name=Msa0251670
chr2_2 mRNA 41840056 41842639 41840056 ID=Msa0251670-mRNA-1;Parent=Msa0251670;Name=Msa0251670-mRNA-1;_AED=0.04;_eAED=0.04;_QI=156|0.8|0.83|1|0.8|0.83|6|258|372
chr2_2 exon 41840056 41841009 41840056 ID=Msa0251670-mRNA-1:exon:13065;Parent=Msa0251670-mRNA-1
chr2_2 exon 41841291 41841333 41841291 ID=Msa0251670-mRNA-1:exon:13064;Parent=Msa0251670-mRNA-1
chr2_2 exon 41841544 41841610 41841544 ID=Msa0251670-mRNA-1:exon:13063;Parent=Msa0251670-mRNA-1
chr2_2 exon 41841737 41841794 41841737 ID=Msa0251670-mRNA-1:exon:13062;Parent=Msa0251670-mRNA-1
chr2_2 exon 41842113 41842189 41842113 ID=Msa0251670-mRNA-1:exon:13061;Parent=Msa0251670-mRNA-1
chr2_2 exon 41842306 41842639 41842306 ID=Msa0251670-mRNA-1:exon:13060;Parent=Msa0251670-mRNA-1
chr2_2 five_prime_UTR 41842484 41842639 41842484 ID=Msa0251670-mRNA-1:five_prime_utr;Parent=Msa0251670-mRNA-1
chr2_2 CDS 41842306 41842483 41842306 ID=Msa0251670-mRNA-1:cds;Parent=Msa0251670-mRNA-1
chr2_2 CDS 41842113 41842189 41842113 ID=Msa0251670-mRNA-1:cds;Parent=Msa0251670-mRNA-1
chr2_2 CDS 41841737 41841794 41841737 ID=Msa0251670-mRNA-1:cds;Parent=Msa0251670-mRNA-1
chr2_2 CDS 41841544 41841610 41841544 ID=Msa0251670-mRNA-1:cds;Parent=Msa0251670-mRNA-1
chr2_2 CDS 41841291 41841333 41841291 ID=Msa0251670-mRNA-1:cds;Parent=Msa0251670-mRNA-1
chr2_2 CDS 41840314 41841009 41840314 ID=Msa0251670-mRNA-1:cds;Parent=Msa0251670-mRNA-1
chr2_2 three_prime_UTR 41840056 41840313 41840056 ID=Msa0251670-mRNA-1:three_prime_utr;Parent=Msa0251670-mRNA-1
Gene Sequence

>Msa0251670

ATGGAAAGAATGTTCCCTCCAAAGAAGCCTTCAACTATGAATTCACATGATAGACCCATGTGTGTTCAAGGTGACTCAGGTCTTGTTCTTACAACTGACCCAAAACCTCGTCTTCGTTGGACTGTTGAACTCCATGAACGTTTTGTTGATGCTGTCACTCAGCTTGGAGGACCTGACAAGGCCACTCCTAAAACTATCATGAGGGTTATGGGTGTGAAGGGTCTTACCCTTTACCATCTCAAGAGCCATCTTCAGAAATTTAGGCTTGGAAAGCAACCCCACAAGGAATTCAATGATCACTCAATTAAGGATGCTTCAGCTTTAGAACTGCAACGGAATACTGCTTCCTCTTCGGCTATGATTGGCCGCAACATGAATGAGATGCAAATTGAGGTGCAGAGAAGACTACATGAGCAGCTTGAGGTACAAAAACACCTTCAACTACGAATTGAAGCTCAAGGGAAATACATGCAAAGTATATTGGAAAAAGCTTATCAGACACTTGCAGGTGAAAACATGGCATCTGCTACAACTAATAACTTAAAGGGCGTTGTTCTTGGACCTCATGGAATGGCTGAAATGGGACTATTGAAAGAATTTGGTTCACCTCTTAGTTTTACATCTTTTCAAGATCTTGACCTTTTCGGAGGCGGTGGTGGTGGTGATCAACTTGACCTTCAACAAAACATGGACAAGCAAACCCTAGATCATCATGCATATATGCAAATCAATGAGAACTTAAGCCTTGGCAAGAAAAGGCCTAACCCTAACACTAACCCTTATAGTGGAAATGGAAAAAACCCATTAATGTGGAGTGATGATTTAAGGCTTCAAGATTTAGGGACAGCTTCATCATGCTTGGATGATCCTTTCAAAGGTGATCAAATTCAAATTGCACCACCATCATTGGATAGAGGAAGTGATATTGAAACTATAGATATTTATGATACAAAGCCTTTACTTCAAGGGGAAATTTTAGGTGAAAAGAAATTTGATGCATCTATGAATAAACTTGAAAGACCCTCACCAAGAAGAGGGCCATCTCTTCATGCTGAAAGAATGAGTCCTATGATTAGTACTGGTACTATGGCACAAGGTAGAGGCTCACCATTTGGATGA
Protein sequence

>Msa0251670

MERMFPPKKPSTMNSHDRPMCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFNDHSIKDASALELQRNTASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAGENMASATTNNLKGVVLGPHGMAEMGLLKEFGSPLSFTSFQDLDLFGGGGGGDQLDLQQNMDKQTLDHHAYMQINENLSLGKKRPNPNTNPYSGNGKNPLMWSDDLRLQDLGTASSCLDDPFKGDQIQIAPPSLDRGSDIETIDIYDTKPLLQGEILGEKKFDASMNKLERPSPRRGPSLHAERMSPMISTGTMAQGRGSPFG*