Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523550 | XP_003603905.1 | 85.714 | 350 | 41 | 3 | 16 | 362 | 16 | 359 | 0.0 | 555 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523550 | sp|P17772|OSS2_PEA | 46.429 | 196 | 70 | 3 | 15 | 208 | 17 | 179 | 5.47e-46 | 158 |
| Msa0523550 | sp|P17772|OSS2_PEA | 63.333 | 120 | 44 | 0 | 243 | 362 | 62 | 181 | 1.04e-43 | 152 |
| Msa0523550 | sp|P17772|OSS2_PEA | 46.471 | 170 | 84 | 2 | 143 | 312 | 17 | 179 | 3.38e-41 | 145 |
| Msa0523550 | sp|P17772|OSS2_PEA | 58.871 | 124 | 47 | 1 | 215 | 338 | 60 | 179 | 2.64e-39 | 140 |
| Msa0523550 | sp|P17772|OSS2_PEA | 53.226 | 124 | 54 | 1 | 137 | 260 | 60 | 179 | 9.94e-35 | 129 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523550 | G7J6J7 | 85.714 | 350 | 41 | 3 | 16 | 362 | 16 | 359 | 0.0 | 555 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0523550 | 0.875739 | 2.430338e-68 | -8.615850e-47 |
| Msa0013270 | Msa0523550 | 0.843322 | 1.504716e-58 | -8.615850e-47 |
| Msa0025570 | Msa0523550 | 0.802682 | 4.995707e-49 | -8.615850e-47 |
| Msa0038530 | Msa0523550 | 0.810422 | 1.161995e-50 | -8.615850e-47 |
| Msa0045810 | Msa0523550 | 0.850755 | 1.382827e-60 | -8.615850e-47 |
| Msa0046200 | Msa0523550 | 0.834048 | 3.754939e-56 | -8.615850e-47 |
| Msa0062190 | Msa0523550 | 0.822128 | 2.796148e-53 | -8.615850e-47 |
| Msa0072180 | Msa0523550 | 0.817156 | 3.816093e-52 | -8.615850e-47 |
| Msa0073110 | Msa0523550 | 0.810108 | 1.357649e-50 | -8.615850e-47 |
| Msa0106540 | Msa0523550 | 0.856263 | 3.621543e-62 | -8.615850e-47 |
| Msa0120450 | Msa0523550 | 0.829673 | 4.512494e-55 | -8.615850e-47 |
| Msa0132700 | Msa0523550 | 0.823590 | 1.276077e-53 | -8.615850e-47 |
| Msa0139500 | Msa0523550 | 0.827987 | 1.154724e-54 | -8.615850e-47 |
| Msa0183710 | Msa0523550 | 0.806078 | 9.793342e-50 | -8.615850e-47 |
| Msa0188560 | Msa0523550 | 0.809267 | 2.058464e-50 | -8.615850e-47 |
| Msa0189720 | Msa0523550 | 0.818428 | 1.969990e-52 | -8.615850e-47 |
| Msa0203080 | Msa0523550 | 0.803179 | 3.944129e-49 | -8.615850e-47 |
| Msa0203880 | Msa0523550 | 0.810219 | 1.285280e-50 | -8.615850e-47 |
| Msa0206370 | Msa0523550 | 0.841522 | 4.516587e-58 | -8.615850e-47 |
| Msa0211460 | Msa0523550 | 0.821515 | 3.876462e-53 | -8.615850e-47 |
| Msa0230920 | Msa0523550 | 0.813842 | 2.085504e-51 | -8.615850e-47 |
| Msa0232100 | Msa0523550 | 0.814042 | 1.884445e-51 | -8.615850e-47 |
| Msa0380110 | Msa0523550 | 0.810455 | 1.142673e-50 | -8.615850e-47 |
| Msa0386540 | Msa0523550 | 0.825687 | 4.091946e-54 | -8.615850e-47 |
| Msa0386560 | Msa0523550 | 0.968057 | 3.866010e-128 | -8.615850e-47 |
| Msa0387930 | Msa0523550 | 0.825556 | 4.394309e-54 | -8.615850e-47 |
| Msa0437480 | Msa0523550 | 0.824258 | 8.898244e-54 | -8.615850e-47 |
| Msa0467170 | Msa0523550 | 0.808041 | 3.763657e-50 | -8.615850e-47 |
| Msa0477900 | Msa0523550 | 0.800301 | 1.537105e-48 | -8.615850e-47 |
| Msa0481670 | Msa0523550 | 0.840563 | 8.064853e-58 | -8.615850e-47 |
| Msa0240540 | Msa0523550 | 0.805695 | 1.179095e-49 | -8.615850e-47 |
| Msa0247050 | Msa0523550 | 0.825414 | 4.749541e-54 | -8.615850e-47 |
| Msa0248320 | Msa0523550 | 0.813931 | 1.993368e-51 | -8.615850e-47 |
| Msa0258010 | Msa0523550 | 0.829056 | 6.372731e-55 | -8.615850e-47 |
| Msa0278940 | Msa0523550 | 0.804880 | 1.746973e-49 | -8.615850e-47 |
| Msa0279810 | Msa0523550 | 0.803147 | 4.004429e-49 | -8.615850e-47 |
| Msa0285420 | Msa0523550 | 0.800283 | 1.549519e-48 | -8.615850e-47 |
| Msa0298690 | Msa0523550 | 0.800956 | 1.129879e-48 | -8.615850e-47 |
| Msa0307630 | Msa0523550 | 0.801383 | 9.242720e-49 | -8.615850e-47 |
| Msa0310130 | Msa0523550 | 0.801421 | 9.074909e-49 | -8.615850e-47 |
| Msa0318490 | Msa0523550 | 0.802893 | 4.519611e-49 | -8.615850e-47 |
| Msa0319220 | Msa0523550 | 0.804361 | 2.241530e-49 | -8.615850e-47 |
| Msa0328870 | Msa0523550 | 0.804311 | 2.296144e-49 | -8.615850e-47 |
| Msa0333770 | Msa0523550 | 0.820899 | 5.375937e-53 | -8.615850e-47 |
| Msa0335340 | Msa0523550 | 0.811729 | 6.053492e-51 | -8.615850e-47 |
| Msa0336460 | Msa0523550 | 0.820876 | 5.439168e-53 | -8.615850e-47 |
| Msa0354840 | Msa0523550 | 0.824574 | 7.496790e-54 | -8.615850e-47 |
| Msa0356270 | Msa0523550 | 0.814190 | 1.748147e-51 | -8.615850e-47 |
| Msa0487110 | Msa0523550 | 0.836993 | 6.754565e-57 | -8.615850e-47 |
| Msa0523550 | Msa0523570 | 0.801591 | 8.376219e-49 | -8.615850e-47 |
| Msa0523550 | Msa0540640 | 0.809460 | 1.871529e-50 | -8.615850e-47 |
| Msa0523550 | Msa0549170 | 0.803829 | 2.892214e-49 | -8.615850e-47 |
| Msa0523550 | Msa0549960 | 0.851004 | 1.177089e-60 | -8.615850e-47 |
| Msa0523550 | Msa0549970 | 0.840167 | 1.023456e-57 | -8.615850e-47 |
| Msa0523550 | Msa0556720 | 0.800011 | 1.760284e-48 | -8.615850e-47 |
| Msa0523550 | Msa0565700 | 0.813186 | 2.907312e-51 | -8.615850e-47 |
| Msa0523550 | Msa0567330 | 0.870989 | 9.617601e-67 | -8.615850e-47 |
| Msa0523550 | Msa0567570 | 0.864915 | 8.619256e-65 | -8.615850e-47 |
| Msa0523550 | Msa0576320 | 0.870080 | 1.911665e-66 | -8.615850e-47 |
| Msa0523550 | Msa0604190 | 0.804752 | 1.857894e-49 | -8.615850e-47 |
| Msa0523550 | Msa0605480 | 0.827885 | 1.221588e-54 | -8.615850e-47 |
| Msa0523550 | Msa0606600 | 0.811278 | 7.585197e-51 | -8.615850e-47 |
| Msa0523550 | Msa0618700 | 0.804479 | 2.118056e-49 | -8.615850e-47 |
| Msa0523550 | Msa0645370 | 0.806273 | 8.911037e-50 | -8.615850e-47 |
| Msa0523550 | Msa0645390 | 0.803965 | 2.709705e-49 | -8.615850e-47 |
| Msa0523550 | Msa0646010 | 0.847107 | 1.425034e-59 | -8.615850e-47 |
| Msa0523550 | Msa0646430 | 0.846357 | 2.285955e-59 | -8.615850e-47 |
| Msa0523550 | Msa0646440 | 0.833535 | 5.044670e-56 | -8.615850e-47 |
| Msa0523550 | Msa0647300 | 0.819267 | 1.270447e-52 | -8.615850e-47 |
| Msa0523550 | Msa0657710 | 0.844349 | 7.988344e-59 | -8.615850e-47 |
| Msa0523550 | Msa0660090 | 0.801107 | 1.052621e-48 | -8.615850e-47 |
| Msa0523550 | Msa0686040 | 0.839671 | 1.378334e-57 | -8.615850e-47 |
| Msa0523550 | Msa0686830 | 0.824517 | 7.734747e-54 | -8.615850e-47 |
| Msa0523550 | Msa0694790 | 0.801526 | 8.638402e-49 | -8.615850e-47 |
| Msa0523550 | Msa0702800 | 0.849863 | 2.460385e-60 | -8.615850e-47 |
| Msa0523550 | Msa0708020 | 0.815726 | 7.975472e-52 | -8.615850e-47 |
| Msa0523550 | Msa0716980 | 0.809967 | 1.455968e-50 | -8.615850e-47 |
| Msa0523550 | Msa0735010 | 0.829079 | 6.291332e-55 | -8.615850e-47 |
| Msa0523550 | Msa0745140 | 0.809294 | 2.031263e-50 | -8.615850e-47 |
| Msa0523550 | Msa0758990 | 0.808904 | 2.462699e-50 | -8.615850e-47 |
| Msa0523550 | Msa0775350 | 0.806933 | 6.465005e-50 | -8.615850e-47 |
| Msa0523550 | Msa0776640 | 0.810419 | 1.163534e-50 | -8.615850e-47 |
| Msa0523550 | Msa0792410 | 0.801181 | 1.016306e-48 | -8.615850e-47 |
| Msa0523550 | Msa0800120 | 0.804853 | 1.769442e-49 | -8.615850e-47 |
| Msa0523550 | Msa0812720 | 0.820088 | 8.249830e-53 | -8.615850e-47 |
| Msa0523550 | Msa0819310 | 0.824484 | 7.871778e-54 | -8.615850e-47 |
| Msa0523550 | Msa0825920 | 0.814340 | 1.619086e-51 | -8.615850e-47 |
| Msa0523550 | Msa0828960 | 0.848181 | 7.220329e-60 | -8.615850e-47 |
| Msa0523550 | Msa0838210 | 0.812313 | 4.515519e-51 | -8.615850e-47 |
| Msa0523550 | Msa0851760 | 0.802800 | 4.724003e-49 | -8.615850e-47 |
| Msa0523550 | Msa0853080 | 0.807592 | 4.688983e-50 | -8.615850e-47 |
| Msa0523550 | Msa0865420 | 0.803791 | 2.945481e-49 | -8.615850e-47 |
| Msa0523550 | Msa0880910 | 0.862540 | 4.715051e-64 | -8.615850e-47 |
| Msa0523550 | Msa0882780 | 0.812492 | 4.126828e-51 | -8.615850e-47 |
| Msa0523550 | Msa0909260 | 0.861075 | 1.323435e-63 | -8.615850e-47 |
| Msa0523550 | Msa0910170 | 0.806656 | 7.397932e-50 | -8.615850e-47 |
| Msa0523550 | Msa0931680 | 0.809653 | 1.701714e-50 | -8.615850e-47 |
| Msa0523550 | Msa0967780 | 0.852215 | 5.341386e-61 | -8.615850e-47 |
| Msa0523550 | Msa0968180 | 0.991640 | 9.877385e-189 | -8.615850e-47 |
| Msa0523550 | Msa0970270 | 0.805604 | 1.231987e-49 | -8.615850e-47 |
| Msa0523550 | Msa1024480 | 0.812732 | 3.656181e-51 | -8.615850e-47 |
| Msa0523550 | Msa1029820 | 0.853994 | 1.653954e-61 | -8.615850e-47 |
| Msa0523550 | Msa1029840 | 0.810087 | 1.371950e-50 | -8.615850e-47 |
| Msa0523550 | Msa1029860 | 0.802532 | 5.364891e-49 | -8.615850e-47 |
| Msa0523550 | Msa1041060 | 0.828096 | 1.087053e-54 | -8.615850e-47 |
| Msa0523550 | Msa1042300 | 0.820525 | 6.551136e-53 | -8.615850e-47 |
| Msa0523550 | Msa1049400 | 0.824479 | 7.893111e-54 | -8.615850e-47 |
| Msa0523550 | Msa1052730 | 0.807068 | 6.053230e-50 | -8.615850e-47 |
| Msa0523550 | Msa1068730 | 0.818173 | 2.250585e-52 | -8.615850e-47 |
| Msa0523550 | Msa1068940 | 0.860968 | 1.426706e-63 | -8.615850e-47 |
| Msa0523550 | Msa1088320 | 0.828858 | 7.117780e-55 | -8.615850e-47 |
| Msa0523550 | Msa1107520 | 0.811182 | 7.957121e-51 | -8.615850e-47 |
| Msa0523550 | Msa1108560 | 0.805409 | 1.353634e-49 | -8.615850e-47 |
| Msa0523550 | Msa1111910 | 0.842465 | 2.543330e-58 | -8.615850e-47 |
| Msa0523550 | Msa1115900 | 0.808003 | 3.833387e-50 | -8.615850e-47 |
| Msa0523550 | Msa1127200 | 0.816293 | 5.958898e-52 | -8.615850e-47 |
| Msa0523550 | Msa1136050 | 0.818329 | 2.074544e-52 | -8.615850e-47 |
| Msa0523550 | Msa1147010 | 0.822442 | 2.363290e-53 | -8.615850e-47 |
| Msa0523550 | Msa1149910 | 0.815088 | 1.105787e-51 | -8.615850e-47 |
| Msa0523550 | Msa1154320 | 0.803045 | 4.203237e-49 | -8.615850e-47 |
| Msa0523550 | Msa1156710 | 0.855547 | 5.863749e-62 | -8.615850e-47 |
| Msa0523550 | Msa1156730 | 0.811384 | 7.193992e-51 | -8.615850e-47 |
| Msa0523550 | Msa1160540 | 0.833363 | 5.567760e-56 | -8.615850e-47 |
| Msa0523550 | Msa1165460 | 0.835235 | 1.888357e-56 | -8.615850e-47 |
| Msa0523550 | Msa1179190 | 0.834171 | 3.496814e-56 | -8.615850e-47 |
| Msa0523550 | Msa1192360 | 0.820569 | 6.398952e-53 | -8.615850e-47 |
| Msa0523550 | Msa1203650 | 0.807933 | 3.967103e-50 | -8.615850e-47 |
| Msa0523550 | Msa1206920 | 0.873373 | 1.545864e-67 | -8.615850e-47 |
| Msa0523550 | Msa1233620 | 0.825890 | 3.662450e-54 | -8.615850e-47 |
| Msa0523550 | Msa1241960 | 0.811512 | 6.747290e-51 | -8.615850e-47 |
| Msa0523550 | Msa1242130 | 0.816361 | 5.754193e-52 | -8.615850e-47 |
| Msa0523550 | Msa1242160 | 0.843604 | 1.265362e-58 | -8.615850e-47 |
| Msa0523550 | Msa1250610 | 0.816841 | 4.491001e-52 | -8.615850e-47 |
| Msa0523550 | Msa1250660 | 0.850535 | 1.594400e-60 | -8.615850e-47 |
| Msa0523550 | Msa1253520 | 0.804942 | 1.695308e-49 | -8.615850e-47 |
| Msa0523550 | Msa1255710 | 0.834317 | 3.214929e-56 | -8.615850e-47 |
| Msa0523550 | Msa1257200 | 0.878547 | 2.571615e-69 | -8.615850e-47 |
| Msa0523550 | Msa1263110 | 0.822840 | 1.909826e-53 | -8.615850e-47 |
| Msa0523550 | Msa1265570 | 0.800703 | 1.272724e-48 | -8.615850e-47 |
| Msa0523550 | Msa1268360 | 0.806616 | 7.542853e-50 | -8.615850e-47 |
| Msa0523550 | Msa1273320 | 0.827548 | 1.472075e-54 | -8.615850e-47 |
| Msa0523550 | Msa1275840 | 0.802688 | 4.983254e-49 | -8.615850e-47 |
| Msa0523550 | Msa1275930 | 0.815382 | 9.513984e-52 | -8.615850e-47 |
| Msa0523550 | Msa1281780 | 0.820411 | 6.955757e-53 | -8.615850e-47 |
| Msa0523550 | Msa1283930 | 0.850507 | 1.624345e-60 | -8.615850e-47 |
| Msa0523550 | Msa1283980 | 0.830221 | 3.318161e-55 | -8.615850e-47 |
| Msa0523550 | Msa1284020 | 0.852498 | 4.438894e-61 | -8.615850e-47 |
| Msa0523550 | Msa1288070 | 0.812699 | 3.717355e-51 | -8.615850e-47 |
| Msa0523550 | Msa1296860 | 0.807689 | 4.471109e-50 | -8.615850e-47 |
| Msa0523550 | Msa1311370 | 0.809710 | 1.654300e-50 | -8.615850e-47 |
| Msa0523550 | Msa1314020 | 0.817683 | 2.903641e-52 | -8.615850e-47 |
| Msa0523550 | Msa1321010 | 0.804873 | 1.752398e-49 | -8.615850e-47 |
| Msa0523550 | Msa1322500 | 0.804408 | 2.191306e-49 | -8.615850e-47 |
| Msa0523550 | Msa1322960 | 0.854827 | 9.494578e-62 | -8.615850e-47 |
| Msa0523550 | Msa1322980 | 0.838153 | 3.405219e-57 | -8.615850e-47 |
| Msa0523550 | Msa1323070 | 0.810642 | 1.041180e-50 | -8.615850e-47 |
| Msa0523550 | Msa1326640 | 0.817936 | 2.546156e-52 | -8.615850e-47 |
| Msa0523550 | Msa1326680 | 0.815992 | 6.956716e-52 | -8.615850e-47 |
| Msa0523550 | Msa1326710 | 0.810020 | 1.418646e-50 | -8.615850e-47 |
| Msa0523550 | Msa1334670 | 0.804896 | 1.733267e-49 | -8.615850e-47 |
| Msa0523550 | Msa1362590 | 0.812425 | 4.266402e-51 | -8.615850e-47 |
| Msa0523550 | Msa1365230 | 0.802201 | 6.276042e-49 | -8.615850e-47 |
| Msa0523550 | Msa1381010 | 0.998916 | 9.895301e-282 | -8.615850e-47 |
| Msa0523550 | Msa1381030 | 0.834381 | 3.096836e-56 | -8.615850e-47 |
| Msa0523550 | Msa1385260 | 0.819972 | 8.770391e-53 | -8.615850e-47 |
| Msa0523550 | Msa1405830 | 0.855199 | 7.406555e-62 | -8.615850e-47 |
| Msa0523550 | Msa1407810 | 0.874313 | 7.445040e-68 | -8.615850e-47 |
| Msa0523550 | Msa1409600 | 0.806793 | 6.920860e-50 | -8.615850e-47 |
| Msa0523550 | Msa1417220 | 0.815220 | 1.033546e-51 | -8.615850e-47 |
| Msa0523550 | Msa1422860 | 0.800800 | 1.215829e-48 | -8.615850e-47 |
| Msa0523550 | Msa1431030 | 0.801214 | 1.000538e-48 | -8.615850e-47 |
| Msa0523550 | Msa1433360 | 0.866923 | 1.998437e-65 | -8.615850e-47 |
| Msa0523550 | Msa1437780 | 0.873536 | 1.363247e-67 | -8.615850e-47 |
| Msa0523550 | Msa1440430 | 0.836984 | 6.793264e-57 | -8.615850e-47 |
| Msa0523550 | Msa1445530 | 0.855229 | 7.258753e-62 | -8.615850e-47 |
| Msa0523550 | Msa1455360 | 0.803253 | 3.807026e-49 | -8.615850e-47 |
| Msa0523550 | Msa1461660 | 0.803132 | 4.033679e-49 | -8.615850e-47 |
| Msa0523550 | Msa1462610 | 0.801989 | 6.939256e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0523550 | MtrunA17_Chr3g0144471 | 85.714 | 350 | 41 | 3 | 16 | 362 | 16 | 359 | 0.0 | 555 |
| Msa0523550 | MtrunA17_Chr3g0090451 | 64.844 | 384 | 111 | 4 | 1 | 360 | 1 | 384 | 5.08e-148 | 431 |
| Msa0523550 | MtrunA17_Chr3g0090451 | 69.686 | 287 | 80 | 3 | 81 | 361 | 308 | 593 | 5.96e-128 | 379 |
| Msa0523550 | MtrunA17_Chr3g0090451 | 70.070 | 284 | 78 | 2 | 85 | 361 | 258 | 541 | 9.50e-128 | 379 |
| Msa0523550 | MtrunA17_Chr3g0090471 | 53.102 | 403 | 125 | 5 | 16 | 360 | 16 | 412 | 6.44e-124 | 365 |
| Msa0523550 | MtrunA17_Chr3g0090471 | 62.366 | 279 | 99 | 2 | 88 | 360 | 186 | 464 | 9.87e-111 | 331 |
| Msa0523550 | MtrunA17_Chr3g0090471 | 57.770 | 296 | 116 | 4 | 47 | 340 | 178 | 466 | 2.15e-102 | 310 |
| Msa0523550 | MtrunA17_Chr3g0090471 | 54.639 | 97 | 40 | 1 | 269 | 361 | 57 | 153 | 1.53e-20 | 92.4 |
| Msa0523550 | MtrunA17_Chr3g0144461 | 57.702 | 383 | 135 | 6 | 1 | 360 | 1 | 379 | 3.06e-123 | 362 |
| Msa0523550 | MtrunA17_Chr3g0144461 | 58.077 | 260 | 106 | 2 | 79 | 337 | 173 | 430 | 3.69e-89 | 275 |
| Msa0523550 | MtrunA17_Chr3g0138221 | 49.714 | 350 | 154 | 4 | 17 | 360 | 17 | 350 | 2.82e-99 | 302 |
| Msa0523550 | MtrunA17_Chr3g0138221 | 49.643 | 280 | 139 | 2 | 85 | 362 | 199 | 478 | 7.00e-80 | 252 |
| Msa0523550 | MtrunA17_Chr3g0138221 | 49.296 | 284 | 138 | 2 | 85 | 362 | 147 | 430 | 5.36e-79 | 250 |
| Msa0523550 | MtrunA17_Chr4g0034831 | 35.233 | 386 | 189 | 17 | 18 | 361 | 19 | 385 | 3.60e-47 | 164 |
| Msa0523550 | MtrunA17_Chr4g0034831 | 33.520 | 358 | 183 | 12 | 19 | 362 | 20 | 336 | 3.39e-43 | 154 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 70 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGGTTCAAAATCTTTAT+TGG | 0.220637 | 3_4:+76931991 | None:intergenic |
| TCTTGGTTCAAAATCTTTAT+TGG | 0.225126 | 3_4:+76931835 | None:intergenic |
| TCTTGGTTCAAAATCTTTAT+TGG | 0.225126 | 3_4:+76931913 | None:intergenic |
| AGACCTAACATTTCAGCTTA+TGG | 0.239620 | 3_4:-76931659 | Msa0523550:CDS |
| AGACCCAATGTTTCAGCTTA+TGG | 0.248284 | 3_4:-76931893 | Msa0523550:CDS |
| AGACCCAATGTTTCAGCTTA+TGG | 0.248284 | 3_4:-76932049 | Msa0523550:CDS |
| AGACCCAATGTTTCAGCTTA+TGG | 0.248284 | 3_4:-76932205 | Msa0523550:CDS |
| AGACCTAATGTTTCAGCTTA+TGG | 0.249885 | 3_4:-76932283 | Msa0523550:CDS |
| TGTAGAATCAAGAAAAGATT+TGG | 0.250935 | 3_4:-76932599 | Msa0523550:CDS |
| GACCTAACATTTCAGCTTAT+GGG | 0.310475 | 3_4:-76931658 | Msa0523550:CDS |
| AGGTCTTGGTTCAAAATCTT+TGG | 0.310679 | 3_4:+76931676 | None:intergenic |
| CATTTATGCATCATATTTAG+TGG | 0.320826 | 3_4:+76931583 | None:intergenic |
| GTTCCATAAGCTGAAACATT+AGG | 0.327800 | 3_4:+76932280 | None:intergenic |
| AAACAATTACATTGATGTTA+TGG | 0.330758 | 3_4:-76931714 | Msa0523550:CDS |
| ATATTTAGTGGCACTTGGTC+GGG | 0.347002 | 3_4:+76931595 | None:intergenic |
| AGACAATCGTGTTGAAGTTA+AGG | 0.379767 | 3_4:-76932104 | Msa0523550:CDS |
| AGACAATGGTATTGATGTTA+AGG | 0.392683 | 3_4:-76931870 | Msa0523550:CDS |
| AGACAATGGTATTGATGTTA+AGG | 0.392683 | 3_4:-76932026 | Msa0523550:CDS |
| ATTGATGTTAAGGAAAATAA+AGG | 0.395870 | 3_4:-76931860 | Msa0523550:CDS |
| ATTGATGTTAAGGAAAATAA+AGG | 0.395870 | 3_4:-76932016 | Msa0523550:CDS |
| AGACCCAATGTTTCAGCATA+TGG | 0.405735 | 3_4:-76931815 | Msa0523550:CDS |
| ATGAATGATGTCATTGTCTA+TGG | 0.405969 | 3_4:+76932417 | None:intergenic |
| ATTGATGTTACAGAAAATAA+AGG | 0.415243 | 3_4:-76931938 | Msa0523550:CDS |
| ACACCCAATGTTTCAGCATA+TGG | 0.418154 | 3_4:-76932127 | Msa0523550:CDS |
| TCTCCATATGCTGAAATGTT+TGG | 0.423109 | 3_4:+76931968 | None:intergenic |
| GTAGAATCAAGAAAAGATTT+GGG | 0.427549 | 3_4:-76932598 | Msa0523550:CDS |
| TATGCTGAAACATTGGGTCT+TGG | 0.433141 | 3_4:+76931740 | None:intergenic |
| TAAGCTGAAACATTGGGTCT+TGG | 0.435355 | 3_4:+76932052 | None:intergenic |
| TATGCTGAAATGTTTGGTCT+TGG | 0.439257 | 3_4:+76931974 | None:intergenic |
| GACAATCGTGTTGAAGTTAA+GGG | 0.442091 | 3_4:-76932103 | Msa0523550:CDS |
| AGACCAAACATTTCAGCATA+TGG | 0.445583 | 3_4:-76931971 | Msa0523550:CDS |
| CATATTTAGTGGCACTTGGT+CGG | 0.446372 | 3_4:+76931594 | None:intergenic |
| GTCTCCATATGCTGAAACAT+TGG | 0.449066 | 3_4:+76931811 | None:intergenic |
| TAAGCTGAAATGTTAGGTCT+TGG | 0.458122 | 3_4:+76931662 | None:intergenic |
| TAAGCTGAAACATTAGGTCT+TGG | 0.463292 | 3_4:+76932286 | None:intergenic |
| TAAGCTGAAACATTGGGTCT+TGG | 0.464372 | 3_4:+76931896 | None:intergenic |
| TAAGCTGAAACATTGGGTCT+TGG | 0.464372 | 3_4:+76932208 | None:intergenic |
| TATGAAGATAATAACATTGA+GGG | 0.464536 | 3_4:-76932337 | Msa0523550:CDS |
| AAACCTTTGAAAGACTGCTT+CGG | 0.465281 | 3_4:+76932484 | None:intergenic |
| ATTCATGCTAAGAGAAAGAA+AGG | 0.472696 | 3_4:-76932400 | Msa0523550:CDS |
| TATGCTGAAACATTGGGTCT+TGG | 0.475638 | 3_4:+76931818 | None:intergenic |
| TCTCCATATGCTGAAACATT+GGG | 0.476305 | 3_4:+76931812 | None:intergenic |
| AACAAATGAAATTGATGCTA+AGG | 0.478202 | 3_4:-76932260 | Msa0523550:CDS |
| GTCTCCATAAGCTGAAACAT+TGG | 0.487144 | 3_4:+76931889 | None:intergenic |
| GTCTCCATAAGCTGAAACAT+TGG | 0.487144 | 3_4:+76932045 | None:intergenic |
| GTCTCCATAAGCTGAAACAT+TGG | 0.487144 | 3_4:+76932201 | None:intergenic |
| TCCCCATAAGCTGAAATGTT+AGG | 0.487972 | 3_4:+76931656 | None:intergenic |
| TATTTAGTGGCACTTGGTCG+GGG | 0.498218 | 3_4:+76931596 | None:intergenic |
| TCTCCATAAGCTGAAACATT+GGG | 0.499953 | 3_4:+76931890 | None:intergenic |
| TCTCCATAAGCTGAAACATT+GGG | 0.499953 | 3_4:+76932046 | None:intergenic |
| TCTCCATAAGCTGAAACATT+GGG | 0.499953 | 3_4:+76932202 | None:intergenic |
| GTCTCCATATGCTGAAACAT+TGG | 0.510420 | 3_4:+76932123 | None:intergenic |
| GCATCATATTTAGTGGCACT+TGG | 0.527772 | 3_4:+76931590 | None:intergenic |
| AATTGATGCTAAGGAAAAGA+AGG | 0.533314 | 3_4:-76932251 | Msa0523550:CDS |
| AGGGGCAACAAAGCAAGAGC+AGG | 0.535358 | 3_4:+76934931 | None:intergenic |
| ACTCCGAAGCAGTCTTTCAA+AGG | 0.542773 | 3_4:-76932487 | Msa0523550:CDS |
| TCTCCATATGCTGAAACATT+GGG | 0.551421 | 3_4:+76932124 | None:intergenic |
| ACCTAACATTTCAGCTTATG+GGG | 0.562671 | 3_4:-76931657 | Msa0523550:CDS |
| GACATGCGAAAAGAAATTCA+AGG | 0.567894 | 3_4:-76932544 | Msa0523550:CDS |
| GTTTCAGCTTATGGAGACAA+TGG | 0.577650 | 3_4:-76931884 | Msa0523550:CDS |
| GTTTCAGCTTATGGAGACAA+TGG | 0.577650 | 3_4:-76932040 | Msa0523550:CDS |
| ATATGAAGATAATAACATTG+AGG | 0.587671 | 3_4:-76932338 | Msa0523550:CDS |
| TATGCTGAAACATTGGGTGT+TGG | 0.621863 | 3_4:+76932130 | None:intergenic |
| ACATGCGAAAAGAAATTCAA+GGG | 0.625015 | 3_4:-76932543 | Msa0523550:CDS |
| TATTGATGTTGAATTCACAA+AGG | 0.628277 | 3_4:-76931627 | Msa0523550:CDS |
| ACTTGTGTGTCTATTACAAG+TGG | 0.633990 | 3_4:+76932442 | None:intergenic |
| ACATACCAAGAAAAGCAAGA+GGG | 0.652569 | 3_4:+76934912 | None:intergenic |
| CATACCAAGAAAAGCAAGAG+GGG | 0.655694 | 3_4:+76934913 | None:intergenic |
| AACATACCAAGAAAAGCAAG+AGG | 0.668669 | 3_4:+76934911 | None:intergenic |
| AAGTCAGACACATACAGCAG+AGG | 0.686329 | 3_4:-76934975 | Msa0523550:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAATAATTATATTTA+AGG | + | chr3_4:76932985-76933004 | None:intergenic | 0.0% |
| !! | AATTAAATGTAAAATATAAG+AGG | + | chr3_4:76931751-76931770 | None:intergenic | 10.0% |
| !!! | AAGATTTAAAAATGATTTTA+TGG | + | chr3_4:76931850-76931869 | None:intergenic | 10.0% |
| !! | AATATATACCTATATATAAA+GGG | + | chr3_4:76932599-76932618 | None:intergenic | 10.0% |
| !! | AATGTAAAATCTTATTATAA+TGG | + | chr3_4:76932653-76932672 | None:intergenic | 10.0% |
| !!! | TCAAAAAAAAAATCATTTTT+TGG | + | chr3_4:76932827-76932846 | None:intergenic | 10.0% |
| !!! | AAAAATGATTTTTTTTTTGA+TGG | - | chr3_4:76932827-76932846 | Msa0523550:intron | 10.0% |
| !!! | TTTTATTTTTATTTTGCTAT+TGG | + | chr3_4:76933110-76933129 | None:intergenic | 10.0% |
| !!! | TGACTTATTTTATATTTTGA+TGG | + | chr3_4:76931597-76931616 | None:intergenic | 15.0% |
| !! | AATAAAATCTTCATCTAATT+GGG | + | chr3_4:76932188-76932207 | None:intergenic | 15.0% |
| !! | AAATAAAATCTTCATCTAAT+TGG | + | chr3_4:76932189-76932208 | None:intergenic | 15.0% |
| !!! | AAACTTTTAATTAAGAAAGT+TGG | + | chr3_4:76932483-76932502 | None:intergenic | 15.0% |
| !! | ATATATACCTATATATAAAG+GGG | + | chr3_4:76932598-76932617 | None:intergenic | 15.0% |
| !! | CAATATATACCTATATATAA+AGG | + | chr3_4:76932600-76932619 | None:intergenic | 15.0% |
| !!! | ATTTTTTGGTAAATCAAAAA+CGG | + | chr3_4:76932813-76932832 | None:intergenic | 15.0% |
| !!! | CTAATTGAGATATTTTTTTA+AGG | + | chr3_4:76933374-76933393 | None:intergenic | 15.0% |
| !! | CTTAAAAAAATATCTCAATT+AGG | - | chr3_4:76933372-76933391 | Msa0523550:intron | 15.0% |
| !!! | ATTTTATATTTTGATGGAAG+TGG | + | chr3_4:76931591-76931610 | None:intergenic | 20.0% |
| !!! | TTGAACAATTATTTTCTTGT+TGG | - | chr3_4:76931769-76931788 | Msa0523550:CDS | 20.0% |
| !! | TATAATCACTAACATCAAAA+TGG | - | chr3_4:76931891-76931910 | Msa0523550:CDS | 20.0% |
| !! | ATAATCACTAACATCAAAAT+GGG | - | chr3_4:76931892-76931911 | Msa0523550:CDS | 20.0% |
| !! | TTATATTGTTCATATTGAAG+TGG | - | chr3_4:76932207-76932226 | Msa0523550:CDS | 20.0% |
| !! | TATCTTCTAATTATACCATT+CGG | + | chr3_4:76932327-76932346 | None:intergenic | 20.0% |
| !!! | GTTGAATCTTTATTTAATTG+TGG | + | chr3_4:76932407-76932426 | None:intergenic | 20.0% |
| !! | TAATAAGAATAGTTAACGAA+GGG | - | chr3_4:76932533-76932552 | Msa0523550:CDS | 20.0% |
| !! | TACTTCAAGAATATTAGATA+TGG | + | chr3_4:76933424-76933443 | None:intergenic | 20.0% |
| !! | ATAAATTGGATCCTAAAATT+TGG | + | chr3_4:76933555-76933574 | None:intergenic | 20.0% |
| !!! | ATTTTAGGATCCAATTTATT+AGG | - | chr3_4:76933556-76933575 | Msa0523550:intron | 20.0% |
| !!! | TAACTTGTATCCTAATAAAT+TGG | + | chr3_4:76933569-76933588 | None:intergenic | 20.0% |
| !! | TATTAGGATACAAGTTAATA+TGG | - | chr3_4:76933572-76933591 | Msa0523550:intron | 20.0% |
| !! | AAATTATTTCCTAACCAAAA+AGG | + | chr3_4:76933848-76933867 | None:intergenic | 20.0% |
| !! | TAAGACATAAGAAAAAGTAA+TGG | + | chr3_4:76933932-76933951 | None:intergenic | 20.0% |
| !!! | TCTTCATATTTTGAAACATT+GGG | + | chr3_4:76934237-76934256 | None:intergenic | 20.0% |
| !!! | ATCTTCATATTTTGAAACAT+TGG | + | chr3_4:76934238-76934257 | None:intergenic | 20.0% |
| !! | ATATGAAGATAATAACATTG+AGG | - | chr3_4:76934248-76934267 | Msa0523550:intron | 20.0% |
| !! | TATGAAGATAATAACATTGA+GGG | - | chr3_4:76934249-76934268 | Msa0523550:intron | 20.0% |
| !! | ATTGATGTTAAGGAAAATAA+AGG | - | chr3_4:76934570-76934589 | Msa0523550:intron | 20.0% |
| !! | ATTGATGTTACAGAAAATAA+AGG | - | chr3_4:76934648-76934667 | Msa0523550:intron | 20.0% |
| !! | ATTGATGTTAAGGAAAATAA+AGG | - | chr3_4:76934570-76934589 | Msa0523550:intron | 20.0% |
| !! | AAACAATTACATTGATGTTA+TGG | - | chr3_4:76934872-76934891 | Msa0523550:intron | 20.0% |
| ! | ATCGATTAACTTTCAGTATT+CGG | + | chr3_4:76931815-76931834 | None:intergenic | 25.0% |
| ! | ATTAGAATAGTTTAACCGAA+TGG | - | chr3_4:76932309-76932328 | Msa0523550:CDS | 25.0% |
| ! | GTAATAAGAATAGTTAACGA+AGG | - | chr3_4:76932532-76932551 | Msa0523550:CDS | 25.0% |
| !! | TAAAGGGGATATATGATTTT+AGG | + | chr3_4:76932583-76932602 | None:intergenic | 25.0% |
| ! | CATATATCCCCTTTATATAT+AGG | - | chr3_4:76932588-76932607 | Msa0523550:CDS | 25.0% |
| !!! | ATTTTTTTTTTGATGGTGTC+TGG | - | chr3_4:76932834-76932853 | Msa0523550:intron | 25.0% |
| !!! | TTTTTTTTTTGATGGTGTCT+GGG | - | chr3_4:76932835-76932854 | Msa0523550:intron | 25.0% |
| !!! | TTTTTATTTTGCTATTGGTC+AGG | + | chr3_4:76933105-76933124 | None:intergenic | 25.0% |
| ! | TTAGGTAGATTAATCTTAAG+TGG | + | chr3_4:76933275-76933294 | None:intergenic | 25.0% |
| !! | TCAACGATTTTCCAAATTTT+AGG | - | chr3_4:76933541-76933560 | Msa0523550:intron | 25.0% |
| ! | GGAAAAAACACTCATAATTA+GGG | + | chr3_4:76933827-76933846 | None:intergenic | 25.0% |
| ! | AGGAAAAAACACTCATAATT+AGG | + | chr3_4:76933828-76933847 | None:intergenic | 25.0% |
| !!! | TATGAGTGTTTTTTCCTTTT+TGG | - | chr3_4:76933831-76933850 | Msa0523550:intron | 25.0% |
| ! | TGTAGAATCAAGAAAAGATT+TGG | - | chr3_4:76933987-76934006 | Msa0523550:intron | 25.0% |
| ! | GTAGAATCAAGAAAAGATTT+GGG | - | chr3_4:76933988-76934007 | Msa0523550:intron | 25.0% |
| ! | AACAAATGAAATTGATGCTA+AGG | - | chr3_4:76934326-76934345 | Msa0523550:intron | 25.0% |
| ! | TATTGATGCTAAGAAAAAGA+AGG | - | chr3_4:76934413-76934432 | Msa0523550:intron | 25.0% |
| ! | TCTTGGTTCAAAATCTTTAT+TGG | + | chr3_4:76934598-76934617 | None:intergenic | 25.0% |
| ! | TCTTGGTTCAAAATCTTTAT+TGG | + | chr3_4:76934598-76934617 | None:intergenic | 25.0% |
| ! | TCTTGGTTCAAAATCTTTAT+TGG | + | chr3_4:76934598-76934617 | None:intergenic | 25.0% |
| !! | TTTTCATATGCTGAAACATT+GGG | + | chr3_4:76934855-76934874 | None:intergenic | 25.0% |
| ! | TATTGATGTTGAATTCACAA+AGG | - | chr3_4:76934959-76934978 | Msa0523550:exon | 25.0% |
| ATTGTCGAGAAAATCTTGTA+TGG | - | chr3_4:76931919-76931938 | Msa0523550:CDS | 30.0% | |
| ! | GTGTGATCAAACCAAAATTT+TGG | + | chr3_4:76931952-76931971 | None:intergenic | 30.0% |
| GACAATGCATAATATATGCA+AGG | + | chr3_4:76932924-76932943 | None:intergenic | 30.0% | |
| ! | AAAAAGTATACGACTCACAT+TGG | - | chr3_4:76933022-76933041 | Msa0523550:intron | 30.0% |
| AAAACATTCAAGTGAGTGTT+GGG | - | chr3_4:76933077-76933096 | Msa0523550:intron | 30.0% | |
| !! | TTTTAAGGATTCGTTATCTC+AGG | + | chr3_4:76933359-76933378 | None:intergenic | 30.0% |
| TTTCACCAGTTTGAGAAAAT+AGG | - | chr3_4:76933491-76933510 | Msa0523550:intron | 30.0% | |
| ! | AATGTCCTATTTTCTCAAAC+TGG | + | chr3_4:76933499-76933518 | None:intergenic | 30.0% |
| GAGAAAATAGGACATTCTTA+AGG | - | chr3_4:76933503-76933522 | Msa0523550:intron | 30.0% | |
| TAGGATACAAGTTAATATGG+TGG | - | chr3_4:76933575-76933594 | Msa0523550:intron | 30.0% | |
| !! | TGAACTTCATAAGAAGTGTT+GGG | + | chr3_4:76933639-76933658 | None:intergenic | 30.0% |
| ! | TTGAACTTCATAAGAAGTGT+TGG | + | chr3_4:76933640-76933659 | None:intergenic | 30.0% |
| TAACCAATAACATGTTTACC+CGG | - | chr3_4:76933748-76933767 | Msa0523550:intron | 30.0% | |
| !!! | GTGTTTTTTCCTTTTTGGTT+AGG | - | chr3_4:76933836-76933855 | Msa0523550:intron | 30.0% |
| GTCTATATGTACAGTAAAGT+TGG | + | chr3_4:76933910-76933929 | None:intergenic | 30.0% | |
| ACATGCGAAAAGAAATTCAA+GGG | - | chr3_4:76934043-76934062 | Msa0523550:intron | 30.0% | |
| ATGAATGATGTCATTGTCTA+TGG | + | chr3_4:76934172-76934191 | None:intergenic | 30.0% | |
| ATTCATGCTAAGAGAAAGAA+AGG | - | chr3_4:76934186-76934205 | Msa0523550:intron | 30.0% | |
| !!! | TATTTTGAAACATTGGGTCT+TGG | + | chr3_4:76934231-76934250 | None:intergenic | 30.0% |
| AATTGATGCTAAGGAAAAGA+AGG | - | chr3_4:76934335-76934354 | Msa0523550:intron | 30.0% | |
| !! | AGACAATGGTATTGATGTTA+AGG | - | chr3_4:76934560-76934579 | Msa0523550:intron | 30.0% |
| !! | AGACAATGGTATTGATGTTA+AGG | - | chr3_4:76934560-76934579 | Msa0523550:intron | 30.0% |
| ! | GTTTTCATATGCTGAAACAT+TGG | + | chr3_4:76934856-76934875 | None:intergenic | 30.0% |
| ACATACCAAGAAAAGCAAGA+GGG | + | chr3_4:76931677-76931696 | None:intergenic | 35.0% | |
| AACATACCAAGAAAAGCAAG+AGG | + | chr3_4:76931678-76931697 | None:intergenic | 35.0% | |
| !! | TCAAACCAAAATTTTGGTCC+TGG | + | chr3_4:76931946-76931965 | None:intergenic | 35.0% |
| GAAAGAGAAGAGAGAGAAAA+TGG | + | chr3_4:76932015-76932034 | None:intergenic | 35.0% | |
| TGTGACCAAACCAAAATTCT+TGG | - | chr3_4:76932059-76932078 | Msa0523550:CDS | 35.0% | |
| AATAACGAGAAACACTTGTG+TGG | + | chr3_4:76932092-76932111 | None:intergenic | 35.0% | |
| TTGTGCAATACGAAAGCAAA+AGG | + | chr3_4:76932120-76932139 | None:intergenic | 35.0% | |
| ! | TGTGAAGAGTTGCATGATTT+TGG | + | chr3_4:76932360-76932379 | None:intergenic | 35.0% |
| CTTCACACAGATGTATAGAT+AGG | - | chr3_4:76932373-76932392 | Msa0523550:CDS | 35.0% | |
| !!! | CCTTTTTTTTGAGGGATCAA+GGG | + | chr3_4:76932753-76932772 | None:intergenic | 35.0% |
| !!! | ACCTTTTTTTTGAGGGATCA+AGG | + | chr3_4:76932754-76932773 | None:intergenic | 35.0% |
| !!! | TCAAGGGACCTTTTTTTTGA+GGG | + | chr3_4:76932761-76932780 | None:intergenic | 35.0% |
| ATGGACCTAATAATGGTCAA+GGG | + | chr3_4:76932777-76932796 | None:intergenic | 35.0% | |
| AATGGACCTAATAATGGTCA+AGG | + | chr3_4:76932778-76932797 | None:intergenic | 35.0% | |
| CAAAACATTCAAGTGAGTGT+TGG | - | chr3_4:76933076-76933095 | Msa0523550:intron | 35.0% | |
| ! | AAACATTCAAGTGAGTGTTG+GGG | - | chr3_4:76933078-76933097 | Msa0523550:intron | 35.0% |
| !!! | GGAGGAGATATTATTTTGAG+TGG | + | chr3_4:76933254-76933273 | None:intergenic | 35.0% |
| GGTAGATTAATCTTAAGTGG+AGG | + | chr3_4:76933272-76933291 | None:intergenic | 35.0% | |
| !! | TCGTTATCTCAGGTTGTTTT+AGG | + | chr3_4:76933349-76933368 | None:intergenic | 35.0% |
| !! | GAACTTCATAAGAAGTGTTG+GGG | + | chr3_4:76933638-76933657 | None:intergenic | 35.0% |
| GACATGCGAAAAGAAATTCA+AGG | - | chr3_4:76934042-76934061 | Msa0523550:intron | 35.0% | |
| !! | CTTGAGATTCTTTTTCGTCT+CGG | + | chr3_4:76934079-76934098 | None:intergenic | 35.0% |
| ! | AAACCTTTGAAAGACTGCTT+CGG | + | chr3_4:76934105-76934124 | None:intergenic | 35.0% |
| ACTTGTGTGTCTATTACAAG+TGG | + | chr3_4:76934147-76934166 | None:intergenic | 35.0% | |
| TAAGCTGAAACATTAGGTCT+TGG | + | chr3_4:76934303-76934322 | None:intergenic | 35.0% | |
| AGACCTAATGTTTCAGCTTA+TGG | - | chr3_4:76934303-76934322 | Msa0523550:intron | 35.0% | |
| GTTCCATAAGCTGAAACATT+AGG | + | chr3_4:76934309-76934328 | None:intergenic | 35.0% | |
| TCTCCATAAGCTGAAACATT+GGG | + | chr3_4:76934387-76934406 | None:intergenic | 35.0% | |
| TCTCCATATGCTGAAACATT+GGG | + | chr3_4:76934465-76934484 | None:intergenic | 35.0% | |
| AGACAATCGTGTTGAAGTTA+AGG | - | chr3_4:76934482-76934501 | Msa0523550:intron | 35.0% | |
| GACAATCGTGTTGAAGTTAA+GGG | - | chr3_4:76934483-76934502 | Msa0523550:intron | 35.0% | |
| TCTCCATAAGCTGAAACATT+GGG | + | chr3_4:76934387-76934406 | None:intergenic | 35.0% | |
| TATGCTGAAATGTTTGGTCT+TGG | + | chr3_4:76934615-76934634 | None:intergenic | 35.0% | |
| AGACCAAACATTTCAGCATA+TGG | - | chr3_4:76934615-76934634 | Msa0523550:intron | 35.0% | |
| TCTCCATATGCTGAAATGTT+TGG | + | chr3_4:76934621-76934640 | None:intergenic | 35.0% | |
| TCTCCATAAGCTGAAACATT+GGG | + | chr3_4:76934387-76934406 | None:intergenic | 35.0% | |
| TCTCCATATGCTGAAACATT+GGG | + | chr3_4:76934465-76934484 | None:intergenic | 35.0% | |
| AGGTCTTGGTTCAAAATCTT+TGG | + | chr3_4:76934913-76934932 | None:intergenic | 35.0% | |
| TAAGCTGAAATGTTAGGTCT+TGG | + | chr3_4:76934927-76934946 | None:intergenic | 35.0% | |
| AGACCTAACATTTCAGCTTA+TGG | - | chr3_4:76934927-76934946 | Msa0523550:CDS | 35.0% | |
| GACCTAACATTTCAGCTTAT+GGG | - | chr3_4:76934928-76934947 | Msa0523550:CDS | 35.0% | |
| ACCTAACATTTCAGCTTATG+GGG | - | chr3_4:76934929-76934948 | Msa0523550:CDS | 35.0% | |
| CATACCAAGAAAAGCAAGAG+GGG | + | chr3_4:76931676-76931695 | None:intergenic | 40.0% | |
| GAGAAAATCTTGTATGGACC+AGG | - | chr3_4:76931925-76931944 | Msa0523550:CDS | 40.0% | |
| ! | ATGGACCAGGACCAAAATTT+TGG | - | chr3_4:76931938-76931957 | Msa0523550:CDS | 40.0% |
| !!! | CAGGACCAAGAATTTTGGTT+TGG | + | chr3_4:76932067-76932086 | None:intergenic | 40.0% |
| CAAACCAAAATTCTTGGTCC+TGG | - | chr3_4:76932065-76932084 | Msa0523550:CDS | 40.0% | |
| CCCTTGATCCCTCAAAAAAA+AGG | - | chr3_4:76932750-76932769 | Msa0523550:intron | 40.0% | |
| !!! | GTCAAGGGACCTTTTTTTTG+AGG | + | chr3_4:76932762-76932781 | None:intergenic | 40.0% |
| AAGGTCCCTTGACCATTATT+AGG | - | chr3_4:76932769-76932788 | Msa0523550:intron | 40.0% | |
| CCATTATTAGGTCCATTGCA+CGG | - | chr3_4:76932781-76932800 | Msa0523550:intron | 40.0% | |
| CATAATATATGCAAGGTCCG+CGG | + | chr3_4:76932917-76932936 | None:intergenic | 40.0% | |
| TGACTCTCAGAGAGAACTTT+AGG | + | chr3_4:76933293-76933312 | None:intergenic | 40.0% | |
| GTTGGGGTTGAGATAAAATG+TGG | + | chr3_4:76933622-76933641 | None:intergenic | 40.0% | |
| TGAAGGTTTCCCTTGTATTC+TGG | + | chr3_4:76933774-76933793 | None:intergenic | 40.0% | |
| AGCGAACAATCATCTAGTGA+AGG | + | chr3_4:76933791-76933810 | None:intergenic | 40.0% | |
| TAAGCTGAAACATTGGGTCT+TGG | + | chr3_4:76934381-76934400 | None:intergenic | 40.0% | |
| AGACCCAATGTTTCAGCTTA+TGG | - | chr3_4:76934381-76934400 | Msa0523550:intron | 40.0% | |
| GTCTCCATAAGCTGAAACAT+TGG | + | chr3_4:76934388-76934407 | None:intergenic | 40.0% | |
| TATGCTGAAACATTGGGTGT+TGG | + | chr3_4:76934459-76934478 | None:intergenic | 40.0% | |
| ACACCCAATGTTTCAGCATA+TGG | - | chr3_4:76934459-76934478 | Msa0523550:intron | 40.0% | |
| GTCTCCATATGCTGAAACAT+TGG | + | chr3_4:76934466-76934485 | None:intergenic | 40.0% | |
| TAAGCTGAAACATTGGGTCT+TGG | + | chr3_4:76934381-76934400 | None:intergenic | 40.0% | |
| AGACCCAATGTTTCAGCTTA+TGG | - | chr3_4:76934381-76934400 | Msa0523550:intron | 40.0% | |
| GTCTCCATAAGCTGAAACAT+TGG | + | chr3_4:76934388-76934407 | None:intergenic | 40.0% | |
| GTTTCAGCTTATGGAGACAA+TGG | - | chr3_4:76934390-76934409 | Msa0523550:intron | 40.0% | |
| TAAGCTGAAACATTGGGTCT+TGG | + | chr3_4:76934381-76934400 | None:intergenic | 40.0% | |
| AGACCCAATGTTTCAGCTTA+TGG | - | chr3_4:76934381-76934400 | Msa0523550:intron | 40.0% | |
| GTCTCCATAAGCTGAAACAT+TGG | + | chr3_4:76934388-76934407 | None:intergenic | 40.0% | |
| GTTTCAGCTTATGGAGACAA+TGG | - | chr3_4:76934390-76934409 | Msa0523550:intron | 40.0% | |
| TATGCTGAAACATTGGGTCT+TGG | + | chr3_4:76934771-76934790 | None:intergenic | 40.0% | |
| AGACCCAATGTTTCAGCATA+TGG | - | chr3_4:76934771-76934790 | Msa0523550:intron | 40.0% | |
| GTCTCCATATGCTGAAACAT+TGG | + | chr3_4:76934466-76934485 | None:intergenic | 40.0% | |
| TATGCTGAAACATTGGGTCT+TGG | + | chr3_4:76934771-76934790 | None:intergenic | 40.0% | |
| TCCCCATAAGCTGAAATGTT+AGG | + | chr3_4:76934933-76934952 | None:intergenic | 40.0% | |
| ATATTTAGTGGCACTTGGTC+GGG | + | chr3_4:76934994-76935013 | None:intergenic | 40.0% | |
| CATATTTAGTGGCACTTGGT+CGG | + | chr3_4:76934995-76935014 | None:intergenic | 40.0% | |
| GCATCATATTTAGTGGCACT+TGG | + | chr3_4:76934999-76935018 | None:intergenic | 40.0% | |
| AAGTCAGACACATACAGCAG+AGG | - | chr3_4:76931611-76931630 | Msa0523550:CDS | 45.0% | |
| GAGAGAAGAGAAGAGAGAGA+AGG | + | chr3_4:76931988-76932007 | None:intergenic | 45.0% | |
| ! | TGGACCAGGACCAAGAATTT+TGG | + | chr3_4:76932072-76932091 | None:intergenic | 45.0% |
| CCGTGCAATGGACCTAATAA+TGG | + | chr3_4:76932784-76932803 | None:intergenic | 45.0% | |
| TTATTAGGTCCATTGCACGG+AGG | - | chr3_4:76932784-76932803 | Msa0523550:intron | 45.0% | |
| TGGCCGGGTAAACATGTTAT+TGG | + | chr3_4:76933754-76933773 | None:intergenic | 45.0% | |
| TTTACCCGGCCAGAATACAA+GGG | - | chr3_4:76933762-76933781 | Msa0523550:intron | 45.0% | |
| ACTCCGAAGCAGTCTTTCAA+AGG | - | chr3_4:76934099-76934118 | Msa0523550:intron | 45.0% | |
| TATTTAGTGGCACTTGGTCG+GGG | + | chr3_4:76934993-76935012 | None:intergenic | 45.0% | |
| !! | AACAAAAATAATAAATATTT+AGG | - | chr3_4:76932726-76932745 | Msa0523550:intron | 5.0% |
| !!! | TGTTATTTTTTATTTTTTTA+AGG | + | chr3_4:76933675-76933694 | None:intergenic | 5.0% |
| !! | GTTGCCCCTCTTGCTTTTCT+TGG | - | chr3_4:76931669-76931688 | Msa0523550:CDS | 50.0% |
| GAGAAACACTTGTGTGGACC+AGG | + | chr3_4:76932086-76932105 | None:intergenic | 50.0% | |
| AAACGGTATCCTCCGTGCAA+TGG | + | chr3_4:76932796-76932815 | None:intergenic | 50.0% | |
| !! | ATGGTGTCTGGGAAAGTGTC+TGG | - | chr3_4:76932846-76932865 | Msa0523550:intron | 50.0% |
| !! | TGGTGTCTGGGAAAGTGTCT+GGG | - | chr3_4:76932847-76932866 | Msa0523550:intron | 50.0% |
| !! | ATGGTGTCTGGGAAAGTGTC+TGG | - | chr3_4:76932846-76932865 | Msa0523550:intron | 50.0% |
| !! | TGGTGTCTGGGAAAGTGTCT+GGG | - | chr3_4:76932847-76932866 | Msa0523550:intron | 50.0% |
| !! | TTCCAACGAGCTTGCTAGCT+TGG | + | chr3_4:76932960-76932979 | None:intergenic | 50.0% |
| !! | GGTGGCTTGCTGCTTAGAAA+AGG | - | chr3_4:76933593-76933612 | Msa0523550:intron | 50.0% |
| CCTTCGAGACAATCTTCGTC+GGG | + | chr3_4:76933712-76933731 | None:intergenic | 50.0% | |
| CCCTTCGAGACAATCTTCGT+CGG | + | chr3_4:76933713-76933732 | None:intergenic | 50.0% | |
| CCGACGAAGATTGTCTCGAA+GGG | - | chr3_4:76933710-76933729 | Msa0523550:intron | 50.0% | |
| GTTTACCCGGCCAGAATACA+AGG | - | chr3_4:76933761-76933780 | Msa0523550:intron | 50.0% | |
| GTTTCCCTTGTATTCTGGCC+GGG | + | chr3_4:76933769-76933788 | None:intergenic | 50.0% | |
| GGTTTCCCTTGTATTCTGGC+CGG | + | chr3_4:76933770-76933789 | None:intergenic | 50.0% | |
| AGGGGCAACAAAGCAAGAGC+AGG | + | chr3_4:76931658-76931677 | None:intergenic | 55.0% | |
| !! | GGTGTCTGGGAAAGTGTCTG+GGG | - | chr3_4:76932848-76932867 | Msa0523550:intron | 55.0% |
| ! | AGTGTCTGGGGTTTGAACCG+CGG | - | chr3_4:76932860-76932879 | Msa0523550:intron | 55.0% |
| TTTGAACCGCGGATGGTGTC+TGG | - | chr3_4:76932871-76932890 | Msa0523550:intron | 55.0% | |
| TTGAACCGCGGATGGTGTCT+GGG | - | chr3_4:76932872-76932891 | Msa0523550:intron | 55.0% | |
| ACTTTCCCAGACACCATCCG+CGG | + | chr3_4:76932880-76932899 | None:intergenic | 55.0% | |
| !! | GGTGTCTGGGAAAGTGTCTG+GGG | - | chr3_4:76932848-76932867 | Msa0523550:intron | 55.0% |
| ! | AGTGTCTGGGGTTTGAACCG+CGG | - | chr3_4:76932860-76932879 | Msa0523550:intron | 55.0% |
| ! | GCTTGCTAGCTTGGCTAAGC+TGG | + | chr3_4:76932951-76932970 | None:intergenic | 55.0% |
| AGCCAAGCTAGCAAGCTCGT+TGG | - | chr3_4:76932955-76932974 | Msa0523550:intron | 55.0% | |
| CCCGACGAAGATTGTCTCGA+AGG | - | chr3_4:76933709-76933728 | Msa0523550:intron | 55.0% | |
| ! | TCTGGGGTTTGAACCGCGGA+TGG | - | chr3_4:76932864-76932883 | Msa0523550:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 76931586 | 76935022 | 76931586 | ID=Msa0523550;Name=Msa0523550 |
| chr3_4 | mRNA | 76931586 | 76935022 | 76931586 | ID=Msa0523550-mRNA-1;Parent=Msa0523550;Name=Msa0523550-mRNA-1;_AED=0.23;_eAED=0.23;_QI=63|1|0.5|1|0|0|2|0|362 |
| chr3_4 | exon | 76931586 | 76932632 | 76931586 | ID=Msa0523550-mRNA-1:exon:22472;Parent=Msa0523550-mRNA-1 |
| chr3_4 | exon | 76934918 | 76935022 | 76934918 | ID=Msa0523550-mRNA-1:exon:22471;Parent=Msa0523550-mRNA-1 |
| chr3_4 | five_prime_UTR | 76934960 | 76935022 | 76934960 | ID=Msa0523550-mRNA-1:five_prime_utr;Parent=Msa0523550-mRNA-1 |
| chr3_4 | CDS | 76934918 | 76934959 | 76934918 | ID=Msa0523550-mRNA-1:cds;Parent=Msa0523550-mRNA-1 |
| chr3_4 | CDS | 76931586 | 76932632 | 76931586 | ID=Msa0523550-mRNA-1:cds;Parent=Msa0523550-mRNA-1 |
| Gene Sequence |
| Protein sequence |
