Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0907840 | ABD32582.1 | 89.209 | 139 | 15 | 0 | 68 | 206 | 785 | 923 | 2.80e-81 | 275 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0907840 | sp|P10978|POLX_TOBAC | 29.091 | 165 | 102 | 5 | 46 | 206 | 391 | 544 | 3.83e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004590 | Msa0907840 | 0.816246 | 6.104549e-52 | -8.615850e-47 |
| Msa0009530 | Msa0907840 | -0.816738 | 4.737413e-52 | -8.615850e-47 |
| Msa0014590 | Msa0907840 | 0.805782 | 1.130545e-49 | -8.615850e-47 |
| Msa0032390 | Msa0907840 | 0.804595 | 2.003189e-49 | -8.615850e-47 |
| Msa0057860 | Msa0907840 | 0.809803 | 1.579696e-50 | -8.615850e-47 |
| Msa0059880 | Msa0907840 | 0.809332 | 1.993892e-50 | -8.615850e-47 |
| Msa0102920 | Msa0907840 | 0.812188 | 4.807953e-51 | -8.615850e-47 |
| Msa0609460 | Msa0907840 | 0.800221 | 1.595386e-48 | -8.615850e-47 |
| Msa0623310 | Msa0907840 | 0.807157 | 5.798306e-50 | -8.615850e-47 |
| Msa0624930 | Msa0907840 | 0.811688 | 6.178511e-51 | -8.615850e-47 |
| Msa0631700 | Msa0907840 | 0.804992 | 1.655434e-49 | -8.615850e-47 |
| Msa0643190 | Msa0907840 | 0.806154 | 9.441834e-50 | -8.615850e-47 |
| Msa0650100 | Msa0907840 | 0.814527 | 1.471977e-51 | -8.615850e-47 |
| Msa0658120 | Msa0907840 | 0.815149 | 1.072014e-51 | -8.615850e-47 |
| Msa0670360 | Msa0907840 | 0.810464 | 1.137745e-50 | -8.615850e-47 |
| Msa0671400 | Msa0907840 | 0.816390 | 5.669262e-52 | -8.615850e-47 |
| Msa0673940 | Msa0907840 | 0.804449 | 2.148413e-49 | -8.615850e-47 |
| Msa0702970 | Msa0907840 | 0.802201 | 6.278346e-49 | -8.615850e-47 |
| Msa0711260 | Msa0907840 | 0.800497 | 1.401650e-48 | -8.615850e-47 |
| Msa0716700 | Msa0907840 | 0.807948 | 3.939156e-50 | -8.615850e-47 |
| Msa0742200 | Msa0907840 | 0.826944 | 2.054204e-54 | -8.615850e-47 |
| Msa0804170 | Msa0907840 | 0.812332 | 4.471775e-51 | -8.615850e-47 |
| Msa0806930 | Msa0907840 | 0.802457 | 5.560638e-49 | -8.615850e-47 |
| Msa0814160 | Msa0907840 | 0.801894 | 7.259207e-49 | -8.615850e-47 |
| Msa0823380 | Msa0907840 | 0.817895 | 2.600700e-52 | -8.615850e-47 |
| Msa0831890 | Msa0907840 | 0.800677 | 1.288264e-48 | -8.615850e-47 |
| Msa0131460 | Msa0907840 | 0.801098 | 1.056818e-48 | -8.615850e-47 |
| Msa0143150 | Msa0907840 | 0.802763 | 4.808763e-49 | -8.615850e-47 |
| Msa0147680 | Msa0907840 | 0.832528 | 8.979342e-56 | -8.615850e-47 |
| Msa0150910 | Msa0907840 | 0.803339 | 3.653953e-49 | -8.615850e-47 |
| Msa0190890 | Msa0907840 | 0.838449 | 2.857550e-57 | -8.615850e-47 |
| Msa0195580 | Msa0907840 | 0.800090 | 1.696236e-48 | -8.615850e-47 |
| Msa0220090 | Msa0907840 | 0.813635 | 2.316388e-51 | -8.615850e-47 |
| Msa0226410 | Msa0907840 | 0.811521 | 6.715227e-51 | -8.615850e-47 |
| Msa0233210 | Msa0907840 | 0.820232 | 7.646972e-53 | -8.615850e-47 |
| Msa0238110 | Msa0907840 | 0.820935 | 5.271773e-53 | -8.615850e-47 |
| Msa0379480 | Msa0907840 | 0.801130 | 1.040836e-48 | -8.615850e-47 |
| Msa0396860 | Msa0907840 | 0.804125 | 2.509553e-49 | -8.615850e-47 |
| Msa0452770 | Msa0907840 | 0.812884 | 3.385690e-51 | -8.615850e-47 |
| Msa0472390 | Msa0907840 | 0.802814 | 4.693004e-49 | -8.615850e-47 |
| Msa0248320 | Msa0907840 | 0.805496 | 1.298308e-49 | -8.615850e-47 |
| Msa0261400 | Msa0907840 | 0.818499 | 1.898424e-52 | -8.615850e-47 |
| Msa0267710 | Msa0907840 | 0.821760 | 3.401004e-53 | -8.615850e-47 |
| Msa0311540 | Msa0907840 | 0.811279 | 7.578650e-51 | -8.615850e-47 |
| Msa0328870 | Msa0907840 | 0.803412 | 3.529581e-49 | -8.615850e-47 |
| Msa0349930 | Msa0907840 | 0.812818 | 3.500964e-51 | -8.615850e-47 |
| Msa0358470 | Msa0907840 | 0.807510 | 4.880073e-50 | -8.615850e-47 |
| Msa0491760 | Msa0907840 | 0.801028 | 1.092025e-48 | -8.615850e-47 |
| Msa0515150 | Msa0907840 | 0.806608 | 7.571991e-50 | -8.615850e-47 |
| Msa0529360 | Msa0907840 | 0.811667 | 6.241527e-51 | -8.615850e-47 |
| Msa0531080 | Msa0907840 | 0.802807 | 4.707549e-49 | -8.615850e-47 |
| Msa0535570 | Msa0907840 | 0.802289 | 6.019521e-49 | -8.615850e-47 |
| Msa0555920 | Msa0907840 | 0.807859 | 4.114000e-50 | -8.615850e-47 |
| Msa0565700 | Msa0907840 | 0.809236 | 2.091189e-50 | -8.615850e-47 |
| Msa0566460 | Msa0907840 | 0.823081 | 1.678534e-53 | -8.615850e-47 |
| Msa0566930 | Msa0907840 | 0.812280 | 4.589974e-51 | -8.615850e-47 |
| Msa0583390 | Msa0907840 | 0.840570 | 8.031249e-58 | -8.615850e-47 |
| Msa0591490 | Msa0907840 | 0.807559 | 4.763381e-50 | -8.615850e-47 |
| Msa0602050 | Msa0907840 | 0.815953 | 7.096794e-52 | -8.615850e-47 |
| Msa0880910 | Msa0907840 | 0.803350 | 3.634659e-49 | -8.615850e-47 |
| Msa0907840 | Msa0932140 | 0.825482 | 4.576518e-54 | -8.615850e-47 |
| Msa0907840 | Msa0932150 | 0.810782 | 9.713282e-51 | -8.615850e-47 |
| Msa0907840 | Msa1015560 | 0.802679 | 5.004617e-49 | -8.615850e-47 |
| Msa0907840 | Msa1061760 | 0.814393 | 1.576592e-51 | -8.615850e-47 |
| Msa0907840 | Msa1066150 | 0.820747 | 5.824076e-53 | -8.615850e-47 |
| Msa0907840 | Msa1098100 | 0.813000 | 3.193231e-51 | -8.615850e-47 |
| Msa0907840 | Msa1107330 | 0.825764 | 3.924318e-54 | -8.615850e-47 |
| Msa0907840 | Msa1130770 | 0.810616 | 1.055170e-50 | -8.615850e-47 |
| Msa0907840 | Msa1138110 | 0.809621 | 1.728636e-50 | -8.615850e-47 |
| Msa0907840 | Msa1150860 | 0.814409 | 1.563734e-51 | -8.615850e-47 |
| Msa0907840 | Msa1186260 | 0.821275 | 4.402256e-53 | -8.615850e-47 |
| Msa0907840 | Msa1225890 | 0.839500 | 1.527064e-57 | -8.615850e-47 |
| Msa0907840 | Msa1273320 | 0.805570 | 1.252426e-49 | -8.615850e-47 |
| Msa0907840 | Msa1281780 | 0.809485 | 1.848675e-50 | -8.615850e-47 |
| Msa0907840 | Msa1323260 | -0.804892 | 1.736439e-49 | -8.615850e-47 |
| Msa0907840 | Msa1343590 | 0.800582 | 1.347207e-48 | -8.615850e-47 |
| Msa0907840 | Msa1380740 | 0.806264 | 8.950930e-50 | -8.615850e-47 |
| Msa0907840 | Msa1386120 | 0.802501 | 5.445309e-49 | -8.615850e-47 |
| Msa0907840 | Msa1395050 | 0.813694 | 2.248116e-51 | -8.615850e-47 |
| Msa0907840 | Msa1413020 | 0.811104 | 8.271040e-51 | -8.615850e-47 |
| Msa0907840 | Msa1421120 | 0.800540 | 1.374157e-48 | -8.615850e-47 |
| Msa0907840 | Msa1427670 | 0.802445 | 5.592538e-49 | -8.615850e-47 |
| Msa0907840 | Msa1447900 | 0.815261 | 1.012328e-51 | -8.615850e-47 |
| Msa0907840 | Msa1457850 | 0.990411 | 1.657794e-182 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0907840 | MtrunA17_Chr1g0153361 | 88.489 | 139 | 16 | 0 | 68 | 206 | 777 | 915 | 1.10e-84 | 273 |
| Msa0907840 | MtrunA17_Chr6g0461421 | 98.113 | 53 | 1 | 0 | 1 | 53 | 1 | 53 | 3.45e-28 | 100 |
| Msa0907840 | MtrunA17_Chr3g0101191 | 36.567 | 134 | 84 | 1 | 73 | 206 | 452 | 584 | 8.00e-24 | 98.6 |
| Msa0907840 | MtrunA17_Chr1g0182461 | 42.453 | 106 | 53 | 3 | 82 | 184 | 120 | 220 | 9.93e-20 | 83.6 |
| Msa0907840 | MtrunA17_Chr8g0373071 | 34.884 | 129 | 82 | 2 | 78 | 206 | 471 | 597 | 1.05e-18 | 83.6 |
| Msa0907840 | MtrunA17_Chr3g0144121 | 33.594 | 128 | 82 | 2 | 77 | 204 | 457 | 581 | 1.86e-17 | 80.1 |
| Msa0907840 | MtrunA17_Chr8g0390891 | 33.594 | 128 | 82 | 2 | 77 | 204 | 88 | 212 | 2.71e-17 | 79.7 |
| Msa0907840 | MtrunA17_Chr7g0253381 | 76.364 | 55 | 11 | 2 | 1 | 54 | 1 | 54 | 5.73e-17 | 72.0 |
| Msa0907840 | MtrunA17_Chr8g0334511 | 38.614 | 101 | 56 | 2 | 82 | 182 | 399 | 493 | 2.39e-16 | 76.6 |
| Msa0907840 | MtrunA17_Chr6g0461381 | 94.340 | 53 | 3 | 0 | 1 | 53 | 1 | 53 | 4.64e-16 | 69.7 |
| Msa0907840 | MtrunA17_Chr4g0069101 | 31.667 | 120 | 74 | 2 | 82 | 201 | 151 | 262 | 6.38e-16 | 75.5 |
| Msa0907840 | MtrunA17_Chr5g0395921 | 34.677 | 124 | 77 | 3 | 83 | 206 | 449 | 568 | 3.29e-15 | 73.6 |
| Msa0907840 | MtrunA17_Chr7g0270971 | 33.333 | 150 | 92 | 5 | 61 | 206 | 485 | 630 | 5.52e-15 | 72.8 |
| Msa0907840 | MtrunA17_Chr2g0320651 | 37.302 | 126 | 73 | 5 | 82 | 206 | 527 | 647 | 6.47e-15 | 72.8 |
| Msa0907840 | MtrunA17_Chr3g0122161 | 37.302 | 126 | 73 | 5 | 82 | 206 | 527 | 647 | 6.59e-15 | 72.8 |
| Msa0907840 | MtrunA17_Chr1g0213431 | 37.302 | 126 | 73 | 5 | 82 | 206 | 516 | 636 | 6.84e-15 | 72.8 |
| Msa0907840 | MtrunA17_Chr7g0229241 | 32.540 | 126 | 81 | 2 | 81 | 206 | 406 | 527 | 5.35e-14 | 70.1 |
| Msa0907840 | MtrunA17_Chr1g0208701 | 30.645 | 124 | 84 | 2 | 83 | 206 | 436 | 557 | 6.93e-13 | 67.0 |
| Msa0907840 | MtrunA17_Chr1g0208691 | 30.645 | 124 | 84 | 2 | 83 | 206 | 436 | 557 | 8.07e-13 | 66.6 |
| Msa0907840 | MtrunA17_Chr6g0478311 | 29.167 | 120 | 76 | 2 | 82 | 201 | 172 | 282 | 9.44e-13 | 65.9 |
| Msa0907840 | MtrunA17_Chr7g0271061 | 34.454 | 119 | 72 | 4 | 82 | 199 | 543 | 656 | 2.73e-12 | 65.1 |
| Msa0907840 | MtrunA17_Chr3g0122931 | 30.159 | 126 | 81 | 3 | 82 | 206 | 98 | 217 | 2.76e-12 | 65.1 |
| Msa0907840 | MtrunA17_Chr1g0179941 | 32.558 | 129 | 73 | 3 | 82 | 206 | 10 | 128 | 6.72e-12 | 63.5 |
| Msa0907840 | MtrunA17_Chr3g0117621 | 34.454 | 119 | 72 | 4 | 82 | 199 | 543 | 656 | 7.50e-12 | 63.9 |
| Msa0907840 | MtrunA17_Chr4g0056611 | 31.783 | 129 | 74 | 3 | 82 | 206 | 10 | 128 | 1.33e-11 | 63.2 |
| Msa0907840 | MtrunA17_Chr7g0219271 | 31.008 | 129 | 77 | 4 | 81 | 206 | 14 | 133 | 4.39e-11 | 61.2 |
| Msa0907840 | MtrunA17_Chr2g0279231 | 33.708 | 89 | 58 | 1 | 118 | 206 | 18 | 105 | 5.95e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 40 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTCCATATTGATTTATT+TGG | 0.140248 | 6_2:+6720563 | Msa0907840:CDS |
| TCCATATCTACTTCCATATA+AGG | 0.308851 | 6_2:-6720603 | None:intergenic |
| GTAAGTACTGCATCCTTATA+TGG | 0.314255 | 6_2:+6720590 | Msa0907840:CDS |
| TATAAGGATGCAGTACTTAC+TGG | 0.355221 | 6_2:-6720587 | None:intergenic |
| TCCTTATATGGAAGTAGATA+TGG | 0.361376 | 6_2:+6720602 | Msa0907840:CDS |
| CGCCTTGAGGCCTTCTCCAC+CGG | 0.392800 | 6_2:+6719070 | Msa0907840:CDS |
| TCTTATCATTCACTGATAGT+AGG | 0.394049 | 6_2:-6720346 | None:intergenic |
| TATCAGTGAATGATAAGAAA+TGG | 0.408927 | 6_2:+6720351 | Msa0907840:CDS |
| GAAGGTTGGGACATGCTAAC+TGG | 0.420487 | 6_2:+6720384 | Msa0907840:CDS |
| CTGGTCCAAATAAATCAATA+TGG | 0.422404 | 6_2:-6720568 | None:intergenic |
| AGAGTAGTAGCATCTGATGT+AGG | 0.452027 | 6_2:-6717772 | None:intergenic |
| TGGATGTGGCACAGAAGGTT+GGG | 0.459165 | 6_2:+6720371 | Msa0907840:CDS |
| ATGATTACAGCAGATGGACT+TGG | 0.462529 | 6_2:+6720639 | Msa0907840:CDS |
| TAAGCTTAGTAAGTTACAAC+TGG | 0.469244 | 6_2:+6720418 | Msa0907840:CDS |
| ACAAAGGAAGCAATTATTGT+TGG | 0.473703 | 6_2:-6717802 | None:intergenic |
| GTAGCATCTGATGTAGGGCT+TGG | 0.485712 | 6_2:-6717766 | None:intergenic |
| TGGGCGCCGTAGCACGTGTC+CGG | 0.494262 | 6_2:-6719089 | None:intergenic |
| GTAAGTTACAACTGGTGAAA+GGG | 0.499005 | 6_2:+6720426 | Msa0907840:CDS |
| TAGCACGTGTCCGGTGGAGA+AGG | 0.503149 | 6_2:-6719080 | None:intergenic |
| ATGGATGTGGCACAGAAGGT+TGG | 0.514705 | 6_2:+6720370 | Msa0907840:CDS |
| TCTGAATGATAGACAATGTC+TGG | 0.515263 | 6_2:-6720452 | None:intergenic |
| AGTAAGTTACAACTGGTGAA+AGG | 0.521700 | 6_2:+6720425 | Msa0907840:CDS |
| GAGTAGTAGCATCTGATGTA+GGG | 0.524730 | 6_2:-6717771 | None:intergenic |
| TCAATATGGAGTAATTCTAA+AGG | 0.529305 | 6_2:-6720554 | None:intergenic |
| GGTGGTGGTGGCCATGATGA+TGG | 0.538657 | 6_2:+6717708 | Msa0907840:CDS |
| AGAAATGGATGTGGCACAGA+AGG | 0.543159 | 6_2:+6720366 | Msa0907840:CDS |
| TTGTTGATGATTACAGCAGA+TGG | 0.551916 | 6_2:+6720633 | Msa0907840:CDS |
| ACTTGATGCTGCCATCATCA+TGG | 0.566779 | 6_2:-6717719 | None:intergenic |
| TCTGATGTAGGGCTTGGAGC+TGG | 0.570335 | 6_2:-6717760 | None:intergenic |
| GAGTAATTCTAAAGGTCTTG+AGG | 0.572266 | 6_2:-6720546 | None:intergenic |
| TCTCCACCGGACACGTGCTA+CGG | 0.584128 | 6_2:+6719083 | Msa0907840:CDS |
| GTCCATCACAGGCCGCCTTG+AGG | 0.605634 | 6_2:+6719057 | Msa0907840:intron |
| GTCCGGTGGAGAAGGCCTCA+AGG | 0.606408 | 6_2:-6719072 | None:intergenic |
| TGATTACAGCAGATGGACTT+GGG | 0.626856 | 6_2:+6720640 | Msa0907840:CDS |
| TCTGTGGTGCATGTCAGAGA+GGG | 0.631647 | 6_2:+6720480 | Msa0907840:CDS |
| CTCTGTGGTGCATGTCAGAG+AGG | 0.662570 | 6_2:+6720479 | Msa0907840:CDS |
| TATCATTCAGATGCACTCTG+TGG | 0.666615 | 6_2:+6720464 | Msa0907840:CDS |
| TGAATGATAAGAAATGGATG+TGG | 0.670153 | 6_2:+6720357 | Msa0907840:CDS |
| GGTTGGGACATGCTAACTGG+AGG | 0.698398 | 6_2:+6720387 | Msa0907840:CDS |
| CGGTGGAGAAGGCCTCAAGG+CGG | 0.737606 | 6_2:-6719069 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTCTTTAACTTTTTTTTT+AGG | + | chr6_2:6718564-6718583 | Msa0907840:intron | 10.0% |
| !!! | TTTCTTTAACTTTTTTTTTA+GGG | + | chr6_2:6718565-6718584 | Msa0907840:intron | 10.0% |
| !! | ATAATATTAATACAATTGAT+TGG | - | chr6_2:6719797-6719816 | None:intergenic | 10.0% |
| !!! | GGATTATGTAATATTTTTTT+TGG | + | chr6_2:6718021-6718040 | Msa0907840:intron | 15.0% |
| !!! | CTATTTTTTGTTAGATAATA+AGG | - | chr6_2:6718276-6718295 | None:intergenic | 15.0% |
| !!! | CATTTCAACATTTTTTTAAT+CGG | + | chr6_2:6718329-6718348 | Msa0907840:intron | 15.0% |
| !!! | TTCTTTAACTTTTTTTTTAG+GGG | + | chr6_2:6718566-6718585 | Msa0907840:intron | 15.0% |
| !! | ATTGAAAAATATTGGTAAAA+AGG | - | chr6_2:6718633-6718652 | None:intergenic | 15.0% |
| !!! | TTAAATTTTTTCTTTGTATG+TGG | + | chr6_2:6718660-6718679 | Msa0907840:intron | 15.0% |
| !!! | TAAATTTTTTCTTTGTATGT+GGG | + | chr6_2:6718661-6718680 | Msa0907840:intron | 15.0% |
| !! | ATTTAGTCAGTATTATAAAT+AGG | - | chr6_2:6718881-6718900 | None:intergenic | 15.0% |
| !! | AGTTTATATAATGAATAAGT+AGG | + | chr6_2:6719192-6719211 | Msa0907840:intron | 15.0% |
| !!! | AAGTGAATTATTATGATTTT+GGG | - | chr6_2:6719947-6719966 | None:intergenic | 15.0% |
| !!! | AAAGTGAATTATTATGATTT+TGG | - | chr6_2:6719948-6719967 | None:intergenic | 15.0% |
| !! | AATAATTCACTTTATAATAG+TGG | + | chr6_2:6719955-6719974 | Msa0907840:intron | 15.0% |
| !! | TACATGTTCATTATTAGATT+TGG | - | chr6_2:6718154-6718173 | None:intergenic | 20.0% |
| !! | ATGAACATGTACAATTTAAA+TGG | + | chr6_2:6718163-6718182 | Msa0907840:intron | 20.0% |
| !!! | AATTCAGAATTTTTGCATTA+TGG | + | chr6_2:6718227-6718246 | Msa0907840:intron | 20.0% |
| !!! | ATTCAGAATTTTTGCATTAT+GGG | + | chr6_2:6718228-6718247 | Msa0907840:intron | 20.0% |
| !!! | TTTTAATCGGTTAAAATTCA+TGG | + | chr6_2:6718342-6718361 | Msa0907840:intron | 20.0% |
| !! | ATTTCTTTAACCTTTAAATG+AGG | + | chr6_2:6718593-6718612 | Msa0907840:intron | 20.0% |
| !! | AAATCACTTCGAAAAATATT+TGG | - | chr6_2:6718771-6718790 | None:intergenic | 20.0% |
| !!! | ATTTTTCGAAGTGATTTTAT+AGG | + | chr6_2:6718774-6718793 | Msa0907840:intron | 20.0% |
| !!! | TTTTTCGAAGTGATTTTATA+GGG | + | chr6_2:6718775-6718794 | Msa0907840:intron | 20.0% |
| !! | AAATAGGAAAAAAAAAGAGT+TGG | - | chr6_2:6718865-6718884 | None:intergenic | 20.0% |
| !! | TTAGTCTAAAAAATTAGTGT+TGG | - | chr6_2:6718927-6718946 | None:intergenic | 20.0% |
| !! | ATCTACATAACAACTTATTT+AGG | + | chr6_2:6719815-6719834 | Msa0907840:intron | 20.0% |
| !! | ATTATTTGCAATGTGTAATT+TGG | - | chr6_2:6720115-6720134 | None:intergenic | 20.0% |
| !!! | TTACTCCATATTGATTTATT+TGG | + | chr6_2:6720563-6720582 | Msa0907840:CDS | 20.0% |
| !! | GATGAATCAAATTTTTGCTA+TGG | + | chr6_2:6717687-6717706 | Msa0907840:CDS | 25.0% |
| ! | TTACCATAACAATTCTTTAG+AGG | + | chr6_2:6717885-6717904 | Msa0907840:intron | 25.0% |
| !! | AATCCTCTAAAGAATTGTTA+TGG | - | chr6_2:6717891-6717910 | None:intergenic | 25.0% |
| !! | ATAACAATTCTTTAGAGGAT+TGG | + | chr6_2:6717890-6717909 | Msa0907840:intron | 25.0% |
| ! | TACATATAAAAAGCAAAGTG+AGG | - | chr6_2:6717979-6717998 | None:intergenic | 25.0% |
| ! | TTCTTGCTTATGTAGTTAAA+TGG | + | chr6_2:6718106-6718125 | Msa0907840:intron | 25.0% |
| ! | GTTCATTATTAGATTTGGAT+AGG | - | chr6_2:6718149-6718168 | None:intergenic | 25.0% |
| !! | GATAATAAGGATTTTACCTT+GGG | - | chr6_2:6718263-6718282 | None:intergenic | 25.0% |
| !! | AGATAATAAGGATTTTACCT+TGG | - | chr6_2:6718264-6718283 | None:intergenic | 25.0% |
| ! | TGTATGAGATCCATATAATT+TGG | + | chr6_2:6718378-6718397 | Msa0907840:intron | 25.0% |
| ! | GGAAAGTGGTATAAAATATT+TGG | - | chr6_2:6718483-6718502 | None:intergenic | 25.0% |
| ! | CATTATTGATAAAGCCTTTA+GGG | + | chr6_2:6718507-6718526 | Msa0907840:intron | 25.0% |
| !!! | CGAAAAATATTTGGCTTTAA+AGG | - | chr6_2:6718762-6718781 | None:intergenic | 25.0% |
| !! | TTTTCGAAGTGATTTTATAG+GGG | + | chr6_2:6718776-6718795 | Msa0907840:intron | 25.0% |
| ! | TGACTAAATCTTATAAGTCA+TGG | + | chr6_2:6718892-6718911 | Msa0907840:intron | 25.0% |
| !!! | ATAACTTGTCTTTAAGTTGA+GGG | - | chr6_2:6718960-6718979 | None:intergenic | 25.0% |
| !! | ACGTAGCATTAAACATTTTT+CGG | - | chr6_2:6719436-6719455 | None:intergenic | 25.0% |
| ! | TATACTAGTGTTTAGTGTTA+TGG | + | chr6_2:6719550-6719569 | Msa0907840:intron | 25.0% |
| ! | ATACTAGTGTTTAGTGTTAT+GGG | + | chr6_2:6719551-6719570 | Msa0907840:intron | 25.0% |
| ! | ACATAACAACTTATTTAGGT+TGG | + | chr6_2:6719819-6719838 | Msa0907840:intron | 25.0% |
| ! | AAGTTGTAAGTCAATATCAT+CGG | - | chr6_2:6719846-6719865 | None:intergenic | 25.0% |
| ! | AAATTGAATTAAGCTGAAGA+TGG | - | chr6_2:6720158-6720177 | None:intergenic | 25.0% |
| ! | NNNNNGCACAAAAATGGAAA+AGG | - | chr6_2:6720204-6720223 | None:intergenic | 25.0% |
| ! | TATCAGTGAATGATAAGAAA+TGG | + | chr6_2:6720351-6720370 | Msa0907840:CDS | 25.0% |
| ! | TCAATATGGAGTAATTCTAA+AGG | - | chr6_2:6720557-6720576 | None:intergenic | 25.0% |
| !! | GAATCAAATTTTTGCTATGG+TGG | + | chr6_2:6717690-6717709 | Msa0907840:CDS | 30.0% |
| ACAAAGGAAGCAATTATTGT+TGG | - | chr6_2:6717805-6717824 | None:intergenic | 30.0% | |
| CACATTGAAGCAATTTGAAA+TGG | + | chr6_2:6718000-6718019 | Msa0907840:intron | 30.0% | |
| ATACATTGCAACCAAAGAAA+GGG | - | chr6_2:6718067-6718086 | None:intergenic | 30.0% | |
| AATACATTGCAACCAAAGAA+AGG | - | chr6_2:6718068-6718087 | None:intergenic | 30.0% | |
| CAATTTAAATGGAGTAGAGT+AGG | + | chr6_2:6718174-6718193 | Msa0907840:intron | 30.0% | |
| ! | AGAATTTTTGCATTATGGGA+CGG | + | chr6_2:6718232-6718251 | Msa0907840:intron | 30.0% |
| ATGAGATCCATATAATTTGG+TGG | + | chr6_2:6718381-6718400 | Msa0907840:intron | 30.0% | |
| ATGAACTCCACCAAATTATA+TGG | - | chr6_2:6718391-6718410 | None:intergenic | 30.0% | |
| ! | CCTAAAGGCTTTATCAATAA+TGG | - | chr6_2:6718509-6718528 | None:intergenic | 30.0% |
| CCATTATTGATAAAGCCTTT+AGG | + | chr6_2:6718506-6718525 | Msa0907840:intron | 30.0% | |
| ATTGGTAAAAAGGAATCCAA+TGG | - | chr6_2:6718623-6718642 | None:intergenic | 30.0% | |
| !!! | ATTTTTTCTTTGTATGTGGG+TGG | + | chr6_2:6718664-6718683 | Msa0907840:intron | 30.0% |
| !! | CATAACTTGTCTTTAAGTTG+AGG | - | chr6_2:6718961-6718980 | None:intergenic | 30.0% |
| TTCATCTTCTCATATCTAAC+TGG | - | chr6_2:6718996-6719015 | None:intergenic | 30.0% | |
| CGACTAAAAATAGGTTAACA+AGG | + | chr6_2:6719143-6719162 | Msa0907840:intron | 30.0% | |
| ATAAACTTGTGCTTAGCATT+GGG | - | chr6_2:6719179-6719198 | None:intergenic | 30.0% | |
| TATAAACTTGTGCTTAGCAT+TGG | - | chr6_2:6719180-6719199 | None:intergenic | 30.0% | |
| !!! | CATTAAACATTTTTCGGGTT+TGG | - | chr6_2:6719430-6719449 | None:intergenic | 30.0% |
| ! | CGTAGCATTAAACATTTTTC+GGG | - | chr6_2:6719435-6719454 | None:intergenic | 30.0% |
| AAATGTTTAATGCTACGTTG+TGG | + | chr6_2:6719438-6719457 | Msa0907840:intron | 30.0% | |
| CTATATATTAGTCCTGTTTG+TGG | + | chr6_2:6719499-6719518 | Msa0907840:intron | 30.0% | |
| ! | TGTCTAAATTTTCCACAAAC+AGG | - | chr6_2:6719514-6719533 | None:intergenic | 30.0% |
| GAAAATTTAGACAATGCCTA+TGG | + | chr6_2:6719521-6719540 | Msa0907840:intron | 30.0% | |
| !!! | TTTTTTTTGTCAAGTAGCCT+AGG | + | chr6_2:6719624-6719643 | Msa0907840:intron | 30.0% |
| !!! | TTTTTTTGTCAAGTAGCCTA+GGG | + | chr6_2:6719625-6719644 | Msa0907840:intron | 30.0% |
| CCACTTATTCACCTTAAAAA+CGG | - | chr6_2:6719662-6719681 | None:intergenic | 30.0% | |
| !!! | CGTTTTTAAGGTGAATAAGT+GGG | + | chr6_2:6719660-6719679 | Msa0907840:intron | 30.0% |
| !!! | GTTTTTAAGGTGAATAAGTG+GGG | + | chr6_2:6719661-6719680 | Msa0907840:intron | 30.0% |
| ACATACATTGTTATATGCAG+GGG | - | chr6_2:6719708-6719727 | None:intergenic | 30.0% | |
| GACATACATTGTTATATGCA+GGG | - | chr6_2:6719709-6719728 | None:intergenic | 30.0% | |
| ! | AAAACCCCTGTTCTTTATTT+CGG | + | chr6_2:6720033-6720052 | Msa0907840:intron | 30.0% |
| TCTTATCATTCACTGATAGT+AGG | - | chr6_2:6720349-6720368 | None:intergenic | 30.0% | |
| TGAATGATAAGAAATGGATG+TGG | + | chr6_2:6720357-6720376 | Msa0907840:CDS | 30.0% | |
| TAAGCTTAGTAAGTTACAAC+TGG | + | chr6_2:6720418-6720437 | Msa0907840:CDS | 30.0% | |
| CTGGTCCAAATAAATCAATA+TGG | - | chr6_2:6720571-6720590 | None:intergenic | 30.0% | |
| TCCTTATATGGAAGTAGATA+TGG | + | chr6_2:6720602-6720621 | Msa0907840:CDS | 30.0% | |
| TCCATATCTACTTCCATATA+AGG | - | chr6_2:6720606-6720625 | None:intergenic | 30.0% | |
| !! | TCAAATTTTTGCTATGGTGG+TGG | + | chr6_2:6717693-6717712 | Msa0907840:CDS | 35.0% |
| !!! | TCCTTTGTTGCTCTTGTTTT+TGG | + | chr6_2:6717817-6717836 | Msa0907840:intron | 35.0% |
| TCCAAAAACAAGAGCAACAA+AGG | - | chr6_2:6717821-6717840 | None:intergenic | 35.0% | |
| TACATTGCAACCAAAGAAAG+GGG | - | chr6_2:6718066-6718085 | None:intergenic | 35.0% | |
| ! | GAATTTTTGCATTATGGGAC+GGG | + | chr6_2:6718233-6718252 | Msa0907840:intron | 35.0% |
| ATCAATAATGGTGAGGAAAG+TGG | - | chr6_2:6718497-6718516 | None:intergenic | 35.0% | |
| ! | AGGCTTTATCAATAATGGTG+AGG | - | chr6_2:6718504-6718523 | None:intergenic | 35.0% |
| AATCTTTCTCACATCCCTAA+AGG | - | chr6_2:6718524-6718543 | None:intergenic | 35.0% | |
| CAATGGAACACCTCATTTAA+AGG | - | chr6_2:6718606-6718625 | None:intergenic | 35.0% | |
| ! | CTTTAAATGAGGTGTTCCAT+TGG | + | chr6_2:6718604-6718623 | Msa0907840:intron | 35.0% |
| GTTTATCAAGATCGATGAAG+CGG | + | chr6_2:6718718-6718737 | Msa0907840:intron | 35.0% | |
| ! | TGAGAAGATGAATGACTTGT+TGG | + | chr6_2:6719004-6719023 | Msa0907840:intron | 35.0% |
| TAGAGTGTGCGACTAAAAAT+AGG | + | chr6_2:6719134-6719153 | Msa0907840:intron | 35.0% | |
| GTCGACAATTGTACATATGA+AGG | - | chr6_2:6719233-6719252 | None:intergenic | 35.0% | |
| AATCCCAAAGGATAATAGTC+CGG | - | chr6_2:6719330-6719349 | None:intergenic | 35.0% | |
| GGATATGTCATAAATCCCAA+AGG | - | chr6_2:6719342-6719361 | None:intergenic | 35.0% | |
| CACTAGTATATATCGTCCAT+AGG | - | chr6_2:6719540-6719559 | None:intergenic | 35.0% | |
| !!! | TTTTTTGTCAAGTAGCCTAG+GGG | + | chr6_2:6719626-6719645 | Msa0907840:intron | 35.0% |
| !!! | CCGTTTTTAAGGTGAATAAG+TGG | + | chr6_2:6719659-6719678 | Msa0907840:intron | 35.0% |
| GGACATACATTGTTATATGC+AGG | - | chr6_2:6719710-6719729 | None:intergenic | 35.0% | |
| ! | GAAATAAAGAACAGGGGTTT+TGG | - | chr6_2:6720034-6720053 | None:intergenic | 35.0% |
| TGACACCGAAATAAAGAACA+GGG | - | chr6_2:6720041-6720060 | None:intergenic | 35.0% | |
| TTGACACCGAAATAAAGAAC+AGG | - | chr6_2:6720042-6720061 | None:intergenic | 35.0% | |
| GGTCATGGAATGAAATGAAT+AGG | - | chr6_2:6720094-6720113 | None:intergenic | 35.0% | |
| TGCAATGTGTAATTTGGTCA+TGG | - | chr6_2:6720109-6720128 | None:intergenic | 35.0% | |
| AGTAAGTTACAACTGGTGAA+AGG | + | chr6_2:6720425-6720444 | Msa0907840:CDS | 35.0% | |
| GTAAGTTACAACTGGTGAAA+GGG | + | chr6_2:6720426-6720445 | Msa0907840:CDS | 35.0% | |
| TCTGAATGATAGACAATGTC+TGG | - | chr6_2:6720455-6720474 | None:intergenic | 35.0% | |
| ! | GAGTAATTCTAAAGGTCTTG+AGG | - | chr6_2:6720549-6720568 | None:intergenic | 35.0% |
| TATAAGGATGCAGTACTTAC+TGG | - | chr6_2:6720590-6720609 | None:intergenic | 35.0% | |
| ! | GTAAGTACTGCATCCTTATA+TGG | + | chr6_2:6720590-6720609 | Msa0907840:CDS | 35.0% |
| !! | TTGTTGATGATTACAGCAGA+TGG | + | chr6_2:6720633-6720652 | Msa0907840:CDS | 35.0% |
| !!! | AATTTTTGCTATGGTGGTGG+TGG | + | chr6_2:6717696-6717715 | Msa0907840:CDS | 40.0% |
| GAGTAGTAGCATCTGATGTA+GGG | - | chr6_2:6717774-6717793 | None:intergenic | 40.0% | |
| AGAGTAGTAGCATCTGATGT+AGG | - | chr6_2:6717775-6717794 | None:intergenic | 40.0% | |
| TTCATTCATCCCCCTTTCTT+TGG | + | chr6_2:6718053-6718072 | Msa0907840:intron | 40.0% | |
| ACATTGCAACCAAAGAAAGG+GGG | - | chr6_2:6718065-6718084 | None:intergenic | 40.0% | |
| AAATGGAGTAGAGTAGGCTT+TGG | + | chr6_2:6718180-6718199 | Msa0907840:intron | 40.0% | |
| !! | AGAGTAGGCTTTGGAAAGAA+AGG | + | chr6_2:6718189-6718208 | Msa0907840:intron | 40.0% |
| !! | GAGTAGGCTTTGGAAAGAAA+GGG | + | chr6_2:6718190-6718209 | Msa0907840:intron | 40.0% |
| ! | TGATTTTATAGGGGCTCGTT+TGG | + | chr6_2:6718785-6718804 | Msa0907840:intron | 40.0% |
| ! | GATTTTATAGGGGCTCGTTT+GGG | + | chr6_2:6718786-6718805 | Msa0907840:intron | 40.0% |
| ATTGAACCCCTCACTAACAT+GGG | - | chr6_2:6719111-6719130 | None:intergenic | 40.0% | |
| TATTGAACCCCTCACTAACA+TGG | - | chr6_2:6719112-6719131 | None:intergenic | 40.0% | |
| TAGGTTAACAAGGTGATACG+TGG | + | chr6_2:6719153-6719172 | Msa0907840:intron | 40.0% | |
| ACTGAACGGTTAGGATATGT+TGG | + | chr6_2:6719303-6719322 | Msa0907840:intron | 40.0% | |
| !! | GCTAGAGTTCACCGTTTTTA+AGG | + | chr6_2:6719648-6719667 | Msa0907840:intron | 40.0% |
| !! | GGGTTTTGGTACAAAGAGAA+AGG | - | chr6_2:6720020-6720039 | None:intergenic | 40.0% |
| GACACCGAAATAAAGAACAG+GGG | - | chr6_2:6720040-6720059 | None:intergenic | 40.0% | |
| TATCATTCAGATGCACTCTG+TGG | + | chr6_2:6720464-6720483 | Msa0907840:CDS | 40.0% | |
| ! | ATGATTACAGCAGATGGACT+TGG | + | chr6_2:6720639-6720658 | Msa0907840:CDS | 40.0% |
| ! | TGATTACAGCAGATGGACTT+GGG | + | chr6_2:6720640-6720659 | Msa0907840:CDS | 40.0% |
| ACTTGATGCTGCCATCATCA+TGG | - | chr6_2:6717722-6717741 | None:intergenic | 45.0% | |
| TATGTGGGTGGCTGAAGTAA+GGG | + | chr6_2:6718676-6718695 | Msa0907840:intron | 45.0% | |
| TCGAGCCTTTCAGTTTCAGA+GGG | - | chr6_2:6718832-6718851 | None:intergenic | 45.0% | |
| ATGTACAATTGTCGACCCTG+AGG | + | chr6_2:6719237-6719256 | Msa0907840:intron | 45.0% | |
| TGTACAATTGTCGACCCTGA+GGG | + | chr6_2:6719238-6719257 | Msa0907840:intron | 45.0% | |
| AGGGACATGTGTGACCATTT+GGG | + | chr6_2:6719257-6719276 | Msa0907840:intron | 45.0% | |
| ATGCAATAGGACCACCCAAA+TGG | - | chr6_2:6719274-6719293 | None:intergenic | 45.0% | |
| TTTGGGTGGTCCTATTGCAT+TGG | + | chr6_2:6719274-6719293 | Msa0907840:intron | 45.0% | |
| TGGTCCTATTGCATTGGATC+AGG | + | chr6_2:6719280-6719299 | Msa0907840:intron | 45.0% | |
| CAGTCCTGATCCAATGCAAT+AGG | - | chr6_2:6719287-6719306 | None:intergenic | 45.0% | |
| TGCATTGGATCAGGACTGAA+CGG | + | chr6_2:6719289-6719308 | Msa0907840:intron | 45.0% | |
| ACGGTTAGGATATGTTGGTC+CGG | + | chr6_2:6719308-6719327 | Msa0907840:intron | 45.0% | |
| TGGTCCGGACTATTATCCTT+TGG | + | chr6_2:6719323-6719342 | Msa0907840:intron | 45.0% | |
| GGTCCGGACTATTATCCTTT+GGG | + | chr6_2:6719324-6719343 | Msa0907840:intron | 45.0% | |
| CAGATCTAATATGCGAGAGC+AGG | - | chr6_2:6719379-6719398 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCGGGTTTGGCCA+AGG | - | chr6_2:6719424-6719443 | None:intergenic | 45.0% |
| ACATTGTTATATGCAGGGGC+CGG | - | chr6_2:6719704-6719723 | None:intergenic | 45.0% | |
| ! | TGAGCATAGCTCAGTTGGTA+GGG | - | chr6_2:6719731-6719750 | None:intergenic | 45.0% |
| AGAAATGGATGTGGCACAGA+AGG | + | chr6_2:6720366-6720385 | Msa0907840:CDS | 45.0% | |
| !! | AAAAAAAAATTGAAAAATAT+TGG | - | chr6_2:6718641-6718660 | None:intergenic | 5.0% |
| GTAGCATCTGATGTAGGGCT+TGG | - | chr6_2:6717769-6717788 | None:intergenic | 50.0% | |
| TTATGGGACGGGAAATCCCA+AGG | + | chr6_2:6718244-6718263 | Msa0907840:intron | 50.0% | |
| GTATGTGGGTGGCTGAAGTA+AGG | + | chr6_2:6718675-6718694 | Msa0907840:intron | 50.0% | |
| ATGTGGGTGGCTGAAGTAAG+GGG | + | chr6_2:6718677-6718696 | Msa0907840:intron | 50.0% | |
| TTTCAGAGGGCTTGGCAACT+AGG | - | chr6_2:6718819-6718838 | None:intergenic | 50.0% | |
| CCTTTCAGTTTCAGAGGGCT+TGG | - | chr6_2:6718827-6718846 | None:intergenic | 50.0% | |
| !! | CCAAGCCCTCTGAAACTGAA+AGG | + | chr6_2:6718824-6718843 | Msa0907840:intron | 50.0% |
| CTCGAGCCTTTCAGTTTCAG+AGG | - | chr6_2:6718833-6718852 | None:intergenic | 50.0% | |
| ATGGTCACACATGTCCCTCA+GGG | - | chr6_2:6719255-6719274 | None:intergenic | 50.0% | |
| AATGGTCACACATGTCCCTC+AGG | - | chr6_2:6719256-6719275 | None:intergenic | 50.0% | |
| GAGGGACATGTGTGACCATT+TGG | + | chr6_2:6719256-6719275 | Msa0907840:intron | 50.0% | |
| GACATGTGTGACCATTTGGG+TGG | + | chr6_2:6719260-6719279 | Msa0907840:intron | 50.0% | |
| TGGATCAGGACTGAACGGTT+AGG | + | chr6_2:6719294-6719313 | Msa0907840:intron | 50.0% | |
| ! | AGGTGAATAAGTGGGGTGTC+CGG | + | chr6_2:6719668-6719687 | Msa0907840:intron | 50.0% |
| ATTGTTATATGCAGGGGCCG+GGG | - | chr6_2:6719702-6719721 | None:intergenic | 50.0% | |
| CATTGTTATATGCAGGGGCC+GGG | - | chr6_2:6719703-6719722 | None:intergenic | 50.0% | |
| GTGAGCATAGCTCAGTTGGT+AGG | - | chr6_2:6719732-6719751 | None:intergenic | 50.0% | |
| ACCAACTGAGCTATGCTCAC+AGG | + | chr6_2:6719732-6719751 | Msa0907840:intron | 50.0% | |
| CCAACTGAGCTATGCTCACA+GGG | + | chr6_2:6719733-6719752 | Msa0907840:intron | 50.0% | |
| ATGGATGTGGCACAGAAGGT+TGG | + | chr6_2:6720370-6720389 | Msa0907840:CDS | 50.0% | |
| TGGATGTGGCACAGAAGGTT+GGG | + | chr6_2:6720371-6720390 | Msa0907840:CDS | 50.0% | |
| GAAGGTTGGGACATGCTAAC+TGG | + | chr6_2:6720384-6720403 | Msa0907840:CDS | 50.0% | |
| TCTGTGGTGCATGTCAGAGA+GGG | + | chr6_2:6720480-6720499 | Msa0907840:CDS | 50.0% | |
| TCTGATGTAGGGCTTGGAGC+TGG | - | chr6_2:6717763-6717782 | None:intergenic | 55.0% | |
| GAGCTTTCGTCGTCCATCAC+AGG | + | chr6_2:6719046-6719065 | Msa0907840:intron | 55.0% | |
| TACGGCGCCCATGTTAGTGA+GGG | + | chr6_2:6719101-6719120 | Msa0907840:intron | 55.0% | |
| GAGCAGGCGACATCATACGA+TGG | - | chr6_2:6719363-6719382 | None:intergenic | 55.0% | |
| AGATCTGACCCGAGCCCAAA+CGG | + | chr6_2:6719392-6719411 | Msa0907840:intron | 55.0% | |
| !! | AGGAGCATTCCGTTTGGGCT+CGG | - | chr6_2:6719404-6719423 | None:intergenic | 55.0% |
| AGCCCAAACGGAATGCTCCT+TGG | + | chr6_2:6719404-6719423 | Msa0907840:intron | 55.0% | |
| !! | GGCCAAGGAGCATTCCGTTT+GGG | - | chr6_2:6719409-6719428 | None:intergenic | 55.0% |
| !! | TGGCCAAGGAGCATTCCGTT+TGG | - | chr6_2:6719410-6719429 | None:intergenic | 55.0% |
| AACGGTGAACTCTAGCCCCT+AGG | - | chr6_2:6719644-6719663 | None:intergenic | 55.0% | |
| ! | GGTGAATAAGTGGGGTGTCC+GGG | + | chr6_2:6719669-6719688 | Msa0907840:intron | 55.0% |
| ! | GTGAATAAGTGGGGTGTCCG+GGG | + | chr6_2:6719670-6719689 | Msa0907840:intron | 55.0% |
| CCCTGTGAGCATAGCTCAGT+TGG | - | chr6_2:6719736-6719755 | None:intergenic | 55.0% | |
| GGTTGGGACATGCTAACTGG+AGG | + | chr6_2:6720387-6720406 | Msa0907840:CDS | 55.0% | |
| CTCTGTGGTGCATGTCAGAG+AGG | + | chr6_2:6720479-6720498 | Msa0907840:CDS | 55.0% | |
| !! | GGTGGTGGTGGCCATGATGA+TGG | + | chr6_2:6717708-6717727 | Msa0907840:CDS | 60.0% |
| TGGGTGGCTGAAGTAAGGGG+TGG | + | chr6_2:6718680-6718699 | Msa0907840:intron | 60.0% | |
| GGGTGGCTGAAGTAAGGGGT+GGG | + | chr6_2:6718681-6718700 | Msa0907840:intron | 60.0% | |
| TAGCACGTGTCCGGTGGAGA+AGG | - | chr6_2:6719083-6719102 | None:intergenic | 60.0% | |
| TCTCCACCGGACACGTGCTA+CGG | + | chr6_2:6719083-6719102 | Msa0907840:CDS | 60.0% | |
| CTACGGCGCCCATGTTAGTG+AGG | + | chr6_2:6719100-6719119 | Msa0907840:intron | 60.0% | |
| ACGGCGCCCATGTTAGTGAG+GGG | + | chr6_2:6719102-6719121 | Msa0907840:intron | 60.0% | |
| ! | GGAGCATTCCGTTTGGGCTC+GGG | - | chr6_2:6719403-6719422 | None:intergenic | 60.0% |
| GTCCATCACAGGCCGCCTTG+AGG | + | chr6_2:6719057-6719076 | Msa0907840:intron | 65.0% | |
| CGGTGGAGAAGGCCTCAAGG+CGG | - | chr6_2:6719072-6719091 | None:intergenic | 65.0% | |
| CGCCTTGAGGCCTTCTCCAC+CGG | + | chr6_2:6719070-6719089 | Msa0907840:CDS | 65.0% | |
| GTCCGGTGGAGAAGGCCTCA+AGG | - | chr6_2:6719075-6719094 | None:intergenic | 65.0% | |
| GGCCTCAAGGCGGCCTGTGA+TGG | - | chr6_2:6719062-6719081 | None:intergenic | 70.0% | |
| ! | TGGGCGCCGTAGCACGTGTC+CGG | - | chr6_2:6719092-6719111 | None:intergenic | 70.0% |
| GGTGTCCGGGGTTCGAACCC+CGG | + | chr6_2:6719682-6719701 | Msa0907840:intron | 70.0% | |
| GCGCCGTAGCACGTGTCCGG+TGG | - | chr6_2:6719089-6719108 | None:intergenic | 75.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | - | chr6_2:6719690-6719709 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 6717673 | 6720751 | 6717673 | ID=Msa0907840;Name=Msa0907840 |
| chr6_2 | mRNA | 6717673 | 6720751 | 6717673 | ID=Msa0907840-mRNA-1;Parent=Msa0907840;Name=Msa0907840-mRNA-1;_AED=0.42;_eAED=0.42;_QI=0|0|0|0.33|1|1|3|0|206 |
| chr6_2 | exon | 6717673 | 6717831 | 6717673 | ID=Msa0907840-mRNA-1:exon:2093;Parent=Msa0907840-mRNA-1 |
| chr6_2 | exon | 6719068 | 6719112 | 6719068 | ID=Msa0907840-mRNA-1:exon:2094;Parent=Msa0907840-mRNA-1 |
| chr6_2 | exon | 6720335 | 6720751 | 6720335 | ID=Msa0907840-mRNA-1:exon:2095;Parent=Msa0907840-mRNA-1 |
| chr6_2 | CDS | 6717673 | 6717831 | 6717673 | ID=Msa0907840-mRNA-1:cds;Parent=Msa0907840-mRNA-1 |
| chr6_2 | CDS | 6719068 | 6719112 | 6719068 | ID=Msa0907840-mRNA-1:cds;Parent=Msa0907840-mRNA-1 |
| chr6_2 | CDS | 6720335 | 6720751 | 6720335 | ID=Msa0907840-mRNA-1:cds;Parent=Msa0907840-mRNA-1 |
| Gene Sequence |
| Protein sequence |
