AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0823380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823380 MtrunA17_Chr5g0443731 92.843 489 20 1 1 489 1 474 0.0 902
Msa0823380 MtrunA17_Chr3g0107501 39.525 463 261 6 27 486 31 477 9.21e-116 349
Msa0823380 MtrunA17_Chr3g0107511 38.540 493 280 8 1 486 1 477 4.11e-113 342
Msa0823380 MtrunA17_Chr8g0388921 36.885 488 290 5 2 487 7 478 4.41e-113 342
Msa0823380 MtrunA17_Chr8g0380471 37.805 492 279 9 5 489 8 479 4.93e-109 332
Msa0823380 MtrunA17_Chr5g0443401 34.286 490 297 7 4 488 10 479 6.39e-101 311
Msa0823380 MtrunA17_Chr8g0380931 32.017 481 285 11 17 483 50 502 3.50e-78 253
Msa0823380 MtrunA17_Chr5g0403931 32.043 465 292 6 7 466 14 459 4.89e-70 231
Msa0823380 MtrunA17_Chr8g0369791 30.612 490 303 10 2 487 10 466 2.67e-67 223
Msa0823380 MtrunA17_Chr5g0408181 31.365 491 298 12 1 487 9 464 5.61e-67 222
Msa0823380 MtrunA17_Chr1g0153371 29.691 485 307 7 2 479 5 462 1.71e-65 219
Msa0823380 MtrunA17_Chr4g0044851 29.295 454 293 5 28 479 36 463 1.03e-63 214
Msa0823380 MtrunA17_Chr8g0341951 28.507 442 285 7 22 457 28 444 8.05e-61 206
Msa0823380 MtrunA17_Chr3g0113321 29.587 436 279 8 28 458 28 440 6.54e-60 204
Msa0823380 MtrunA17_Chr7g0226771 27.609 460 309 6 28 485 32 469 5.40e-59 201
Msa0823380 MtrunA17_Chr4g0044841 29.284 461 297 8 22 479 31 465 1.96e-58 200
Msa0823380 MtrunA17_Chr2g0293411 27.696 473 317 11 2 466 11 466 5.23e-56 194
Msa0823380 MtrunA17_Chr5g0397971 24.839 467 329 5 7 471 9 455 2.88e-54 189
Msa0823380 MtrunA17_Chr8g0372411 25.641 429 300 4 30 457 40 450 3.85e-54 189
Msa0823380 MtrunA17_Chr7g0219961 28.043 460 298 9 27 483 31 460 3.85e-53 186
Msa0823380 MtrunA17_Chr8g0381541 25.435 460 322 7 29 483 43 486 1.52e-51 182
Msa0823380 MtrunA17_Chr8g0381571 26.097 433 300 6 29 457 43 459 1.69e-51 181
Msa0823380 MtrunA17_Chr5g0400421 25.957 470 322 10 18 480 34 484 1.85e-51 182
Msa0823380 MtrunA17_Chr3g0078411 26.087 483 322 8 2 479 5 457 5.33e-51 180
Msa0823380 MtrunA17_Chr1g0164371 27.893 484 315 10 5 483 19 473 1.31e-50 179
Msa0823380 MtrunA17_Chr8g0373441 28.770 431 285 7 2 429 6 417 1.57e-50 177
Msa0823380 MtrunA17_Chr3g0141801 28.118 473 319 7 6 474 16 471 5.31e-50 178
Msa0823380 MtrunA17_Chr6g0455461 26.087 483 322 9 2 479 5 457 8.16e-50 177
Msa0823380 MtrunA17_Chr2g0293421 25.850 441 300 9 29 463 45 464 1.94e-49 176
Msa0823380 MtrunA17_Chr5g0400411 25.636 472 326 10 18 483 34 486 4.14e-48 172
Msa0823380 MtrunA17_Chr6g0478161 24.696 494 339 6 1 486 22 490 1.41e-47 171
Msa0823380 MtrunA17_Chr3g0089361 25.652 460 307 13 13 466 26 456 1.20e-46 168
Msa0823380 MtrunA17_Chr8g0372711 25.918 463 313 7 6 461 19 458 9.10e-46 166
Msa0823380 MtrunA17_Chr3g0089351 26.316 399 265 9 70 466 3 374 1.02e-43 159
Msa0823380 MtrunA17_Chr8g0339861 26.667 435 290 12 29 457 45 456 1.56e-43 160
Msa0823380 MtrunA17_Chr1g0160851 23.840 474 327 12 5 461 9 465 7.99e-26 110
Msa0823380 MtrunA17_Chr6g0458561 25.051 495 312 18 7 464 28 500 2.16e-25 109
Msa0823380 MtrunA17_Chr5g0395321 25.400 500 332 15 4 484 11 488 2.44e-25 109
Msa0823380 MtrunA17_Chr5g0404861 38.710 124 75 1 342 464 15 138 3.99e-25 101
Msa0823380 MtrunA17_Chr3g0116741 23.541 497 336 13 7 481 29 503 9.80e-24 104
Msa0823380 MtrunA17_Chr5g0395331 23.896 498 312 13 22 484 30 495 2.77e-23 102
Msa0823380 MtrunA17_Chr1g0205361 23.868 486 312 16 5 461 9 465 3.45e-23 102
Msa0823380 MtrunA17_Chr8g0354531 24.706 425 270 11 62 461 219 618 6.76e-23 102
Msa0823380 MtrunA17_Chr5g0395381 24.949 493 318 15 4 484 11 463 1.49e-22 100
Msa0823380 MtrunA17_Chr5g0405001 24.096 498 302 13 6 461 18 481 2.01e-22 100
Msa0823380 MtrunA17_Chr8g0381561 34.545 110 71 1 348 457 2 110 4.90e-22 91.7
Msa0823380 MtrunA17_Chr4g0004601 24.890 454 288 16 55 483 103 528 1.08e-21 98.2
Msa0823380 MtrunA17_Chr2g0313821 24.299 428 270 14 62 461 88 489 1.13e-21 98.2
Msa0823380 MtrunA17_Chr1g0205371 23.636 495 313 16 4 464 6 469 1.31e-21 97.8
Msa0823380 MtrunA17_Chr5g0401691 24.086 465 317 12 10 460 35 477 1.69e-21 97.4
Msa0823380 MtrunA17_Chr3g0135841 23.450 516 320 15 4 464 15 510 2.34e-21 97.1
Msa0823380 MtrunA17_Chr5g0437001 42.593 108 60 1 349 454 1 108 6.49e-21 89.4
Msa0823380 MtrunA17_Chr8g0339331 26.087 437 269 14 63 464 70 487 9.56e-21 95.1
Msa0823380 MtrunA17_Chr0c19g0493771 26.996 263 171 7 205 461 373 620 1.56e-20 95.1
Msa0823380 MtrunA17_Chr6g0451691 24.131 518 296 22 1 457 8 489 1.63e-20 94.7
Msa0823380 MtrunA17_Chr4g0039901 30.702 228 147 6 239 460 244 466 2.56e-20 94.0
Msa0823380 MtrunA17_Chr6g0463551 27.363 201 119 3 188 381 9 189 4.73e-20 88.2
Msa0823380 MtrunA17_Chr8g0362731 27.200 375 227 14 127 482 49 396 5.06e-20 92.0
Msa0823380 MtrunA17_Chr7g0215181 25.935 401 257 16 102 485 131 508 6.31e-20 92.8
Msa0823380 MtrunA17_Chr4g0000151 34.862 109 69 2 349 457 6 112 8.38e-20 85.9
Msa0823380 MtrunA17_Chr5g0401681 24.583 480 321 17 4 464 7 464 9.61e-20 92.0
Msa0823380 MtrunA17_Chr4g0057001 22.958 453 319 14 22 458 43 481 1.11e-19 92.0
Msa0823380 MtrunA17_Chr4g0035921 23.030 495 321 13 3 461 11 481 1.48e-19 91.7
Msa0823380 MtrunA17_Chr1g0161671 24.576 236 174 3 12 244 12 246 2.08e-19 89.0
Msa0823380 MtrunA17_Chr8g0356001 31.278 227 146 5 241 461 252 474 2.17e-19 90.9
Msa0823380 MtrunA17_Chr8g0355961 24.898 490 305 16 5 461 15 474 2.42e-19 90.9
Msa0823380 MtrunA17_Chr5g0403321 23.904 456 311 16 28 461 33 474 3.01e-19 90.5
Msa0823380 MtrunA17_Chr2g0307291 23.913 414 265 13 74 461 102 491 3.24e-19 90.5
Msa0823380 MtrunA17_Chr6g0466941 23.810 504 301 20 2 453 8 480 3.33e-19 90.5
Msa0823380 MtrunA17_Chr3g0128461 25.243 309 210 7 160 461 203 497 3.97e-19 90.1
Msa0823380 MtrunA17_Chr5g0403351 22.899 476 339 15 4 461 6 471 4.29e-19 90.1
Msa0823380 MtrunA17_Chr4g0058191 23.819 487 311 17 6 461 1 458 4.34e-19 90.1
Msa0823380 MtrunA17_Chr1g0160861 26.222 225 158 4 241 461 86 306 4.93e-19 88.2
Msa0823380 MtrunA17_Chr2g0310381 23.125 480 336 13 2 464 1 464 5.58e-19 89.7
Msa0823380 MtrunA17_Chr8g0381551 22.373 295 211 4 29 320 43 322 8.60e-19 87.4
Msa0823380 MtrunA17_Chr8g0354511 25.527 427 273 13 58 461 93 497 8.99e-19 89.0
Msa0823380 MtrunA17_Chr2g0307301 25.326 383 232 12 108 461 134 491 1.10e-18 89.0
Msa0823380 MtrunA17_Chr2g0313811 25.610 328 193 13 159 461 200 501 1.14e-18 89.0
Msa0823380 MtrunA17_Chr2g0280081 23.095 433 277 14 64 461 564 975 1.56e-18 89.4
Msa0823380 MtrunA17_Chr2g0280081 22.824 425 288 11 64 461 63 474 2.55e-17 85.5
Msa0823380 MtrunA17_Chr8g0354571 24.466 421 285 10 58 461 93 497 1.73e-18 88.2
Msa0823380 MtrunA17_Chr6g0463541 40.000 90 52 1 377 466 2 89 2.30e-18 80.9
Msa0823380 MtrunA17_Chr2g0280121 24.648 426 281 12 64 461 67 480 2.34e-18 87.8
Msa0823380 MtrunA17_Chr5g0446161 23.770 488 324 16 4 466 9 473 2.52e-18 87.8
Msa0823380 MtrunA17_Chr4g0053621 22.981 483 326 16 6 464 8 468 2.65e-18 87.8
Msa0823380 MtrunA17_Chr6g0466901 22.107 484 307 17 4 442 9 467 3.21e-18 87.4
Msa0823380 MtrunA17_Chr8g0334891 22.345 452 313 13 24 463 33 458 3.62e-18 87.0
Msa0823380 MtrunA17_Chr6g0457421 26.303 403 255 17 101 485 128 506 3.66e-18 87.0
Msa0823380 MtrunA17_Chr8g0361471 24.307 469 302 16 21 461 26 469 4.01e-18 87.0
Msa0823380 MtrunA17_Chr7g0218601 25.106 470 289 19 16 449 15 457 5.12e-18 86.7
Msa0823380 MtrunA17_Chr4g0047661 22.134 506 353 16 5 487 20 507 5.40e-18 86.7
Msa0823380 MtrunA17_Chr1g0174481 23.838 495 332 16 5 474 9 483 5.83e-18 86.7
Msa0823380 MtrunA17_Chr2g0314731 31.034 203 131 4 264 461 267 465 6.37e-18 86.3
Msa0823380 MtrunA17_Chr3g0101631 24.895 478 320 19 2 461 8 464 6.72e-18 86.3
Msa0823380 MtrunA17_Chr8g0372251 22.851 442 285 12 30 440 36 452 1.19e-17 85.5
Msa0823380 MtrunA17_Chr5g0404881 23.077 221 163 2 8 222 9 228 1.41e-17 82.0
Msa0823380 MtrunA17_Chr7g0265611 22.680 485 307 17 16 461 30 485 1.42e-17 85.5
Msa0823380 MtrunA17_Chr2g0280071 23.313 489 323 13 5 461 39 507 1.75e-17 85.5
Msa0823380 MtrunA17_Chr2g0313771 21.922 333 222 9 147 461 184 496 3.24e-17 84.3
Msa0823380 MtrunA17_Chr4g0039391 29.508 244 156 9 256 488 263 501 3.49e-17 84.3
Msa0823380 MtrunA17_Chr8g0364651 20.690 493 332 14 1 460 1 467 3.54e-17 84.0
Msa0823380 MtrunA17_Chr2g0313801 24.695 328 196 12 159 461 188 489 3.75e-17 84.0
Msa0823380 MtrunA17_Chr6g0451641 24.795 488 315 21 4 457 9 478 3.79e-17 84.0
Msa0823380 MtrunA17_Chr2g0313791 25.000 328 195 13 159 461 183 484 3.87e-17 84.0
Msa0823380 MtrunA17_Chr2g0313781 25.698 358 214 14 132 461 168 501 3.88e-17 84.0
Msa0823380 MtrunA17_Chr4g0056951 26.599 297 195 10 175 458 190 476 3.97e-17 84.0
Msa0823380 MtrunA17_Chr7g0235261 23.896 385 243 13 124 483 148 507 4.12e-17 84.0
Msa0823380 MtrunA17_Chr2g0310391 22.129 479 338 14 5 464 2 464 5.59e-17 83.6
Msa0823380 MtrunA17_Chr6g0466331 23.667 469 305 16 21 461 26 469 5.83e-17 83.6
Msa0823380 MtrunA17_Chr2g0288661 23.077 325 205 10 159 461 190 491 5.90e-17 83.6
Msa0823380 MtrunA17_Chr6g0465511 23.305 472 303 17 21 461 26 469 6.15e-17 83.6
Msa0823380 MtrunA17_Chr2g0313751 26.295 251 158 7 230 461 274 516 8.30e-17 83.2
Msa0823380 MtrunA17_Chr5g0419691 25.341 513 330 19 2 484 1 490 8.75e-17 82.8
Msa0823380 MtrunA17_Chr2g0313761 23.385 325 208 9 159 463 183 486 1.06e-16 82.8
Msa0823380 MtrunA17_Chr1g0176831 30.000 210 133 5 257 461 295 495 1.10e-16 82.8
Msa0823380 MtrunA17_Chr7g0255531 22.944 462 312 18 8 442 1 445 1.12e-16 82.4
Msa0823380 MtrunA17_Chr4g0011961 22.062 485 332 15 1 461 1 463 1.13e-16 82.4
Msa0823380 MtrunA17_Chr8g0364081 25.478 314 195 11 170 458 212 511 1.16e-16 82.8
Msa0823380 MtrunA17_Chr4g0011871 24.903 514 332 19 2 484 1 491 1.37e-16 82.4
Msa0823380 MtrunA17_Chr5g0446151 23.696 460 309 16 26 466 38 474 1.65e-16 82.0
Msa0823380 MtrunA17_Chr3g0116681 24.694 490 307 22 1 461 15 471 1.71e-16 82.0
Msa0823380 MtrunA17_Chr5g0431501 22.176 478 327 14 29 482 33 489 3.00e-16 81.3
Msa0823380 MtrunA17_Chr5g0431461 22.176 478 327 14 29 482 33 489 3.00e-16 81.3
Msa0823380 MtrunA17_Chr6g0451741 28.270 237 150 9 231 457 281 507 3.07e-16 81.3
Msa0823380 MtrunA17_Chr1g0197871 26.724 232 156 5 240 464 242 466 3.30e-16 80.9
Msa0823380 MtrunA17_Chr8g0382901 24.000 475 314 16 2 461 1 443 3.47e-16 81.6
Msa0823380 MtrunA17_Chr4g0047691 21.967 478 334 15 27 487 50 505 3.52e-16 81.3
Msa0823380 MtrunA17_Chr1g0179811 22.737 453 312 13 56 486 103 539 4.69e-16 80.9
Msa0823380 MtrunA17_Chr1g0151221 28.736 174 102 5 296 457 332 495 6.23e-16 80.5
Msa0823380 MtrunA17_Chr8g0336361 25.362 414 223 18 127 482 161 546 6.25e-16 80.5
Msa0823380 MtrunA17_Chr2g0313831 25.000 432 262 15 62 461 88 489 7.04e-16 80.1
Msa0823380 MtrunA17_Chr4g0047631 23.013 478 321 16 6 461 28 480 7.79e-16 80.1
Msa0823380 MtrunA17_Chr1g0197881 28.780 205 132 5 264 461 265 462 8.39e-16 79.7
Msa0823380 MtrunA17_Chr1g0197891 28.780 205 132 5 264 461 266 463 8.39e-16 79.7
Msa0823380 MtrunA17_Chr1g0197851 28.780 205 132 5 264 461 266 463 8.85e-16 79.7
Msa0823380 MtrunA17_Chr4g0020041 24.262 474 296 19 20 461 28 470 1.26e-15 79.3
Msa0823380 MtrunA17_Chr5g0396521 25.617 324 177 11 177 461 244 542 1.40e-15 79.3
Msa0823380 MtrunA17_Chr5g0446131 22.404 366 250 11 115 461 137 487 1.73e-15 79.0
Msa0823380 MtrunA17_Chr5g0403331 24.449 454 308 17 28 461 34 472 1.78e-15 79.0
Msa0823380 MtrunA17_Chr8g0351801 24.924 329 221 7 169 476 178 501 1.93e-15 79.0
Msa0823380 MtrunA17_Chr5g0436981 30.400 125 86 1 28 151 27 151 2.10e-15 74.7
Msa0823380 MtrunA17_Chr3g0101761 22.037 481 341 12 7 463 1 471 3.87e-15 77.8
Msa0823380 MtrunA17_Chr3g0082701 25.676 222 150 7 231 442 259 475 4.08e-15 77.8
Msa0823380 MtrunA17_Chr2g0280011 28.161 174 113 4 298 461 11 182 4.33e-15 74.3
Msa0823380 MtrunA17_Chr4g0063221 24.873 394 254 14 90 461 119 492 4.44e-15 77.8
Msa0823380 MtrunA17_Chr1g0164211 23.276 464 316 17 18 463 23 464 5.50e-15 77.4
Msa0823380 MtrunA17_Chr7g0246221 23.918 485 326 13 1 461 6 471 5.73e-15 77.4
Msa0823380 MtrunA17_Chr2g0314721 28.182 220 149 4 258 472 272 487 7.60e-15 77.0
Msa0823380 MtrunA17_Chr4g0011881 23.695 498 328 17 16 484 16 490 8.31e-15 76.6
Msa0823380 MtrunA17_Chr1g0156101 23.077 481 311 18 18 461 21 479 9.92e-15 76.6
Msa0823380 MtrunA17_Chr4g0052861 21.967 478 333 14 4 464 10 464 1.12e-14 76.3
Msa0823380 MtrunA17_Chr4g0058211 30.994 171 111 3 295 461 19 186 1.41e-14 72.8
Msa0823380 MtrunA17_Chr3g0101691 22.811 491 320 18 2 461 11 473 1.61e-14 75.9
Msa0823380 MtrunA17_Chr3g0101821 22.293 471 344 11 5 463 11 471 1.62e-14 75.9
Msa0823380 MtrunA17_Chr3g0101721 24.565 460 313 15 20 461 28 471 1.67e-14 75.9
Msa0823380 MtrunA17_Chr4g0076161 23.465 456 307 16 28 461 36 471 1.78e-14 75.9
Msa0823380 MtrunA17_Chr3g0101801 24.684 474 319 16 10 463 23 478 1.89e-14 75.9
Msa0823380 MtrunA17_Chr3g0101601 22.718 471 329 16 7 461 14 465 1.89e-14 75.5
Msa0823380 MtrunA17_Chr2g0304871 24.082 490 309 20 7 457 15 480 1.97e-14 75.5
Msa0823380 MtrunA17_Chr7g0260831 22.345 452 299 17 37 459 43 471 2.39e-14 75.5
Msa0823380 MtrunA17_Chr1g0193811 23.356 441 296 13 71 488 97 518 3.78e-14 74.7
Msa0823380 MtrunA17_Chr7g0218611 24.781 456 284 19 26 449 30 458 4.65e-14 74.3
Msa0823380 MtrunA17_Chr8g0334941 25.523 239 164 6 235 463 69 303 5.30e-14 73.2
Msa0823380 MtrunA17_Chr4g0047641 22.083 480 331 17 5 461 25 484 5.51e-14 74.3
Msa0823380 MtrunA17_Chr3g0119681 22.563 359 233 13 138 463 146 492 5.66e-14 74.3
Msa0823380 MtrunA17_Chr2g0308651 28.090 178 123 3 288 461 212 388 6.95e-14 73.6
Msa0823380 MtrunA17_Chr3g0101621 23.026 456 315 16 21 461 25 459 7.23e-14 73.9
Msa0823380 MtrunA17_Chr1g0174471 23.154 501 333 18 5 474 25 504 8.71e-14 73.6
Msa0823380 MtrunA17_Chr5g0406651 23.568 454 296 15 16 442 17 446 8.81e-14 73.6
Msa0823380 MtrunA17_Chr1g0200951 26.446 242 152 8 239 465 273 503 1.16e-13 73.2
Msa0823380 MtrunA17_Chr2g0280061 27.907 172 116 3 298 461 11 182 1.28e-13 70.1
Msa0823380 MtrunA17_Chr3g0101831 23.045 486 322 17 4 463 13 472 1.29e-13 73.2
Msa0823380 MtrunA17_Chr2g0314781 33.333 144 90 3 323 461 10 152 1.29e-13 68.9
Msa0823380 MtrunA17_Chr6g0484811 22.800 500 325 21 5 472 12 482 2.37e-13 72.4
Msa0823380 MtrunA17_Chr6g0451781 21.212 462 286 17 26 438 71 503 2.39e-13 72.4
Msa0823380 MtrunA17_Chr6g0463801 22.199 473 314 13 19 466 27 470 2.87e-13 72.0
Msa0823380 MtrunA17_Chr3g0101661 23.553 501 304 23 4 461 8 472 3.02e-13 72.0
Msa0823380 MtrunA17_Chr1g0163421 22.785 395 256 12 90 462 147 514 3.67e-13 71.6
Msa0823380 MtrunA17_Chr2g0334021 34.416 154 95 3 339 486 345 498 3.86e-13 71.6
Msa0823380 MtrunA17_Chr3g0101671 22.833 473 304 18 21 461 30 473 3.94e-13 71.6
Msa0823380 MtrunA17_Chr1g0162801 22.746 488 321 18 5 461 9 471 4.21e-13 71.2
Msa0823380 MtrunA17_Chr4g0024771 21.639 476 334 18 6 461 12 468 4.61e-13 71.2
Msa0823380 MtrunA17_Chr5g0445451 21.086 479 335 19 5 461 11 468 5.17e-13 71.2
Msa0823380 MtrunA17_Chr8g0354541 31.967 122 79 2 344 461 30 151 8.53e-13 66.6
Msa0823380 MtrunA17_Chr4g0052881 23.207 237 169 5 231 465 241 466 9.37e-13 70.5
Msa0823380 MtrunA17_Chr3g0089291 22.800 250 167 7 73 320 6 231 1.10e-12 67.8
Msa0823380 MtrunA17_Chr1g0163451 22.556 399 252 13 90 462 131 498 1.15e-12 70.1
Msa0823380 MtrunA17_Chr8g0387101 22.042 431 286 13 64 462 65 477 1.21e-12 70.1
Msa0823380 MtrunA17_Chr4g0046331 22.737 475 305 16 8 442 5 457 1.28e-12 70.1
Msa0823380 MtrunA17_Chr6g0463561 27.673 159 111 3 7 162 14 171 1.43e-12 66.6
Msa0823380 MtrunA17_Chr7g0248991 24.766 214 141 7 205 415 155 351 1.77e-12 68.9
Msa0823380 MtrunA17_Chr5g0445441 20.417 480 337 17 5 461 52 509 2.76e-12 68.9
Msa0823380 MtrunA17_Chr3g0089381 24.762 210 137 5 173 381 3 192 3.04e-12 66.2
Msa0823380 MtrunA17_Chr8g0362481 27.602 221 145 5 231 442 173 387 3.16e-12 68.6
Msa0823380 MtrunA17_Chr1g0174431 27.979 193 124 3 295 476 1 189 3.53e-12 65.9
Msa0823380 MtrunA17_Chr1g0174461 27.027 222 146 7 231 442 241 456 4.88e-12 68.2
Msa0823380 MtrunA17_Chr4g0046681 27.097 155 102 4 295 442 31 181 5.06e-12 65.9
Msa0823380 MtrunA17_Chr5g0445381 21.444 471 338 14 6 461 46 499 6.60e-12 67.8
Msa0823380 MtrunA17_Chr4g0046321 21.975 405 275 14 64 442 66 455 7.93e-12 67.4
Msa0823380 MtrunA17_Chr4g0026941 25.217 230 157 8 242 465 295 515 8.54e-12 67.4
Msa0823380 MtrunA17_Chr3g0101701 22.938 497 312 21 2 461 11 473 1.13e-11 67.0
Msa0823380 MtrunA17_Chr4g0011921 22.222 486 331 17 1 461 1 464 1.40e-11 66.6
Msa0823380 MtrunA17_Chr5g0445461 20.800 500 350 18 5 481 11 487 1.82e-11 66.2
Msa0823380 MtrunA17_Chr4g0017411 24.686 239 165 6 248 482 240 467 1.83e-11 66.2
Msa0823380 MtrunA17_Chr2g0280041 27.604 192 127 5 280 461 317 506 1.89e-11 66.2
Msa0823380 MtrunA17_Chr5g0445421 20.675 474 322 15 5 461 85 521 2.46e-11 65.9
Msa0823380 MtrunA17_Chr3g0101731 22.581 465 314 17 20 461 28 469 3.18e-11 65.5
Msa0823380 MtrunA17_Chr1g0163351 21.348 356 240 9 125 463 148 480 4.44e-11 65.1
Msa0823380 MtrunA17_Chr5g0431671 21.239 452 317 16 29 461 38 469 5.63e-11 64.7
Msa0823380 MtrunA17_Chr1g0161661 33.803 71 46 1 393 463 7 76 5.89e-11 59.3
Msa0823380 MtrunA17_Chr7g0224551 22.244 499 307 22 6 458 4 467 6.39e-11 64.7
Msa0823380 MtrunA17_Chr4g0011901 23.028 469 312 18 19 461 19 464 6.88e-11 64.3
Msa0823380 MtrunA17_Chr3g0104351 21.098 346 233 9 169 488 187 518 7.21e-11 64.3
Msa0823380 MtrunA17_Chr7g0227281 22.115 312 209 8 163 455 166 462 8.78e-11 63.9
Msa0823380 MtrunA17_Chr7g0258211 23.485 264 177 6 231 479 245 498 8.82e-11 64.3
Msa0823380 MtrunA17_Chr3g0101651 23.246 499 308 26 2 461 11 473 9.31e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0823380 AT5G36110.1 36.774 465 265 8 29 486 34 476 2.26e-102 315
Msa0823380 AT2G42850.1 34.279 458 278 7 31 486 47 483 5.49e-92 288
Msa0823380 AT5G45340.1 30.722 485 299 10 1 483 10 459 1.34e-69 229
Msa0823380 AT5G45340.2 31.410 468 284 10 1 466 10 442 6.55e-69 227
Msa0823380 AT4G19230.1 31.072 457 282 8 29 484 36 460 8.82e-68 225
Msa0823380 AT5G36110.2 34.877 367 213 6 29 390 34 379 2.14e-67 221
Msa0823380 AT4G19230.2 31.469 429 262 7 29 457 36 432 3.64e-65 218
Msa0823380 AT3G13730.2 29.630 432 284 6 28 457 50 463 4.20e-64 215
Msa0823380 AT3G13730.1 29.630 432 284 6 28 457 50 463 1.34e-63 214
Msa0823380 AT2G32440.2 28.700 446 293 8 17 457 32 457 5.61e-63 213
Msa0823380 AT2G32440.1 28.700 446 293 8 17 457 32 457 5.61e-63 213
Msa0823380 AT5G05690.1 29.561 433 279 7 29 458 31 440 1.87e-61 208
Msa0823380 AT4G36380.1 27.928 444 299 4 29 468 69 495 5.27e-61 208
Msa0823380 AT2G29090.2 28.510 463 297 8 28 485 48 481 5.66e-61 207
Msa0823380 AT2G29090.1 28.510 463 297 8 28 485 48 481 5.66e-61 207
Msa0823380 AT2G42850.2 32.410 361 224 5 31 390 47 388 7.05e-61 204
Msa0823380 AT1G05160.2 27.918 437 292 7 29 460 45 463 8.21e-60 204
Msa0823380 AT1G05160.1 27.918 437 292 7 29 460 45 463 8.21e-60 204
Msa0823380 AT3G50660.1 30.416 457 294 8 29 465 39 491 8.16e-59 202
Msa0823380 AT3G19270.2 26.471 476 321 7 6 479 11 459 5.92e-57 196
Msa0823380 AT3G30180.1 26.789 489 325 8 1 485 5 464 3.11e-55 192
Msa0823380 AT3G19270.1 26.711 453 304 6 6 457 11 436 4.12e-55 191
Msa0823380 AT1G19630.1 27.371 464 314 7 5 465 9 452 5.84e-55 191
Msa0823380 AT1G19630.3 27.851 456 306 7 5 457 9 444 7.24e-55 190
Msa0823380 AT1G12740.1 23.579 475 338 6 2 471 1 455 7.01e-54 188
Msa0823380 AT5G36140.1 31.861 317 190 7 15 326 16 311 6.79e-52 179
Msa0823380 AT1G12740.4 23.285 481 338 7 2 471 1 461 2.36e-51 181
Msa0823380 AT1G12740.2 23.077 481 339 7 2 471 1 461 5.71e-51 181
Msa0823380 AT5G38970.1 25.963 493 328 10 1 485 1 464 7.06e-51 180
Msa0823380 AT5G14400.2 25.000 456 303 6 34 488 1 418 5.38e-49 174
Msa0823380 AT2G29090.3 28.238 386 247 7 105 485 26 386 3.01e-48 171
Msa0823380 AT1G73340.1 25.502 498 330 9 2 486 11 480 5.63e-48 172
Msa0823380 AT5G05690.2 26.952 397 266 6 29 424 31 404 3.08e-47 169
Msa0823380 AT1G19630.2 27.229 415 281 5 5 416 9 405 3.86e-47 169
Msa0823380 AT3G50660.2 29.323 399 269 7 29 418 39 433 2.81e-46 167
Msa0823380 AT1G55940.2 25.397 504 336 15 2 489 16 495 1.25e-45 167
Msa0823380 AT5G14400.3 24.706 425 281 6 34 457 1 387 3.21e-45 163
Msa0823380 AT1G55940.1 25.847 472 310 15 2 457 16 463 4.02e-44 162
Msa0823380 AT1G65670.1 25.926 459 300 9 1 453 10 434 5.64e-43 159
Msa0823380 AT5G38970.2 26.055 403 271 7 86 485 5 383 1.23e-41 153
Msa0823380 AT5G38970.4 26.055 403 271 7 86 485 5 383 1.23e-41 153
Msa0823380 AT5G05690.3 29.204 339 214 7 123 458 6 321 2.24e-41 151
Msa0823380 AT5G36130.1 43.571 140 76 2 349 486 1 139 1.93e-39 140
Msa0823380 AT5G38970.3 24.941 421 283 7 1 415 1 394 3.08e-39 147
Msa0823380 AT4G15300.3 25.974 462 298 13 2 453 1 428 4.44e-39 148
Msa0823380 AT4G15300.2 25.918 463 299 13 1 453 10 438 4.65e-39 148
Msa0823380 AT5G48000.2 25.572 481 316 14 17 484 23 474 5.30e-39 148
Msa0823380 AT5G48000.4 25.572 481 316 14 17 484 23 474 5.30e-39 148
Msa0823380 AT5G48000.7 25.572 481 316 14 17 484 23 474 5.30e-39 148
Msa0823380 AT5G48000.6 25.572 481 316 14 17 484 23 474 5.30e-39 148
Msa0823380 AT5G48000.5 25.572 481 316 14 17 484 23 474 5.30e-39 148
Msa0823380 AT5G48000.3 25.572 481 316 14 17 484 23 474 5.30e-39 148
Msa0823380 AT3G44970.1 26.151 478 311 12 24 487 30 479 5.74e-39 148
Msa0823380 AT5G14400.1 25.187 401 261 6 89 488 2 364 8.44e-39 145
Msa0823380 AT5G48000.1 25.625 480 315 14 17 483 64 514 9.34e-39 148
Msa0823380 AT1G78490.1 23.614 487 346 10 4 484 8 474 2.05e-36 140
Msa0823380 AT4G15300.1 25.957 470 310 15 2 453 1 450 1.89e-35 138
Msa0823380 AT1G12740.3 22.997 387 272 7 2 383 1 366 1.25e-34 133
Msa0823380 AT4G15396.3 22.876 459 318 9 3 453 9 439 1.85e-33 132
Msa0823380 AT4G15396.1 22.876 459 318 9 3 453 9 439 2.26e-33 132
Msa0823380 AT4G15393.2 23.696 460 311 10 3 453 9 437 6.68e-32 128
Msa0823380 AT4G36380.2 24.507 355 249 3 29 381 69 406 6.91e-32 127
Msa0823380 AT5G14400.4 24.355 349 244 4 34 381 1 330 1.14e-30 122
Msa0823380 AT5G67310.1 24.131 489 325 16 2 470 15 477 5.58e-26 111
Msa0823380 AT1G78490.2 22.986 422 300 9 3 419 7 408 6.17e-25 107
Msa0823380 AT3G30290.1 25.255 392 258 11 70 454 6 369 1.01e-24 106
Msa0823380 AT4G15396.2 21.133 459 305 9 3 453 9 418 1.29e-24 106
Msa0823380 AT4G15396.4 21.905 420 294 8 3 416 9 400 7.82e-24 103
Msa0823380 AT2G45550.1 25.466 483 316 16 7 461 9 475 3.56e-23 102
Msa0823380 AT4G15393.1 22.749 422 288 9 3 417 9 399 8.86e-23 100
Msa0823380 AT5G25140.1 24.951 509 335 19 2 488 1 484 1.59e-22 100
Msa0823380 AT4G12320.1 23.173 479 326 17 9 461 19 481 3.28e-22 100
Msa0823380 AT4G13770.1 24.116 481 330 17 2 461 1 467 1.66e-21 97.8
Msa0823380 AT4G15310.1 23.624 436 302 11 24 453 31 441 2.98e-21 97.1
Msa0823380 AT4G37330.1 24.719 445 314 10 5 442 7 437 8.69e-21 95.5
Msa0823380 AT4G37410.1 23.232 495 345 17 5 483 7 482 1.20e-20 95.1
Msa0823380 AT4G37320.1 24.197 467 322 13 5 457 7 455 1.91e-20 94.7
Msa0823380 AT4G37430.1 22.965 479 327 15 1 457 1 459 2.32e-20 94.4
Msa0823380 AT2G14100.1 24.215 446 295 15 44 464 54 481 2.89e-20 94.0
Msa0823380 AT5G57220.1 23.932 468 320 17 5 458 6 451 4.82e-20 93.2
Msa0823380 AT3G20090.2 23.077 481 343 11 1 464 13 483 7.50e-20 92.8
Msa0823380 AT3G48280.1 22.269 476 335 14 1 461 1 456 1.22e-19 92.0
Msa0823380 AT1G50520.1 25.820 488 305 17 5 458 15 479 2.12e-19 91.7
Msa0823380 AT5G25120.1 23.154 501 345 18 6 488 6 484 2.51e-19 91.3
Msa0823380 AT3G26300.1 24.948 485 319 16 2 461 1 465 2.74e-19 90.9
Msa0823380 AT2G26170.1 22.541 488 321 14 7 457 21 488 5.64e-19 90.1
Msa0823380 AT2G26170.2 28.099 242 155 7 226 457 173 405 6.15e-19 89.7
Msa0823380 AT5G47990.1 23.168 423 280 14 63 458 72 476 9.07e-19 89.4
Msa0823380 AT4G15393.3 23.628 419 255 11 3 417 9 366 9.72e-19 88.2
Msa0823380 AT2G45570.1 23.515 421 295 11 60 461 64 476 1.51e-18 89.0
Msa0823380 AT5G25180.1 23.752 501 343 19 6 488 5 484 1.61e-18 88.6
Msa0823380 AT3G25180.1 23.467 473 316 17 11 457 17 469 2.03e-18 88.6
Msa0823380 AT4G37400.1 23.028 469 328 14 5 458 7 457 3.19e-18 87.8
Msa0823380 AT3G20120.4 22.718 515 310 16 1 464 4 481 3.43e-18 87.8
Msa0823380 AT1G31800.1 22.247 454 301 13 37 461 111 541 4.61e-18 87.8
Msa0823380 AT5G06900.1 23.214 448 315 15 5 438 10 442 5.44e-18 87.0
Msa0823380 AT3G53130.1 23.025 443 285 14 56 468 103 519 1.14e-17 86.3
Msa0823380 AT1G33720.1 22.917 480 331 14 6 461 11 475 1.20e-17 85.9
Msa0823380 AT2G45560.1 24.324 481 324 17 7 461 9 475 1.42e-17 85.9
Msa0823380 AT3G20940.1 22.489 458 327 10 21 461 34 480 1.47e-17 85.9
Msa0823380 AT3G20140.1 21.586 454 315 15 29 461 42 475 2.54e-17 85.1
Msa0823380 AT3G20110.1 23.493 481 329 14 4 464 11 472 2.61e-17 85.1
Msa0823380 AT4G37340.1 23.305 472 323 17 4 457 5 455 3.05e-17 84.7
Msa0823380 AT4G15330.1 21.593 477 343 11 5 464 14 476 3.70e-17 84.7
Msa0823380 AT5G42580.1 21.801 422 279 13 64 461 70 464 4.71e-17 84.3
Msa0823380 AT1G64940.1 28.889 225 145 6 247 460 258 478 6.12e-17 84.0
Msa0823380 AT2G26710.1 23.238 383 269 9 90 461 120 488 6.69e-17 84.0
Msa0823380 AT4G15360.1 23.013 478 337 14 5 464 15 479 6.70e-17 84.0
Msa0823380 AT2G29090.4 22.000 300 204 5 28 324 48 320 7.55e-17 82.4
Msa0823380 AT1G66540.2 26.991 226 151 6 235 457 69 283 8.56e-17 82.0
Msa0823380 AT4G37370.1 21.505 465 309 15 4 442 5 439 9.41e-17 83.2
Msa0823380 AT4G15110.1 26.687 326 171 13 177 461 252 550 1.25e-16 83.2
Msa0823380 AT5G24900.2 29.353 201 124 6 288 482 210 398 1.53e-16 82.0
Msa0823380 AT1G66540.1 26.991 226 151 6 235 457 128 342 1.70e-16 81.6
Msa0823380 AT5G04330.1 23.517 472 295 16 27 461 30 472 1.73e-16 82.4
Msa0823380 AT3G20960.2 21.615 421 301 11 63 464 71 481 2.03e-16 82.4
Msa0823380 AT5G36220.1 24.109 477 315 18 5 457 8 461 2.08e-16 82.0
Msa0823380 AT1G11680.1 21.548 478 333 14 1 463 10 460 2.21e-16 82.0
Msa0823380 AT3G28740.1 24.936 389 247 14 87 457 102 463 2.58e-16 82.0
Msa0823380 AT5G24900.1 29.353 201 124 6 288 482 327 515 3.43e-16 81.6
Msa0823380 AT3G14630.2 25.325 308 205 11 163 461 245 536 5.03e-16 81.3
Msa0823380 AT4G31500.1 22.515 493 322 19 2 461 1 466 5.16e-16 80.9
Msa0823380 AT3G26280.1 24.784 464 288 17 15 442 14 452 5.20e-16 80.9
Msa0823380 AT3G14630.1 25.325 308 205 11 163 461 190 481 5.45e-16 80.9
Msa0823380 AT5G52400.1 22.841 359 246 13 115 461 153 492 5.72e-16 80.9
Msa0823380 AT1G33720.4 25.667 300 201 8 174 461 54 343 5.90e-16 80.1
Msa0823380 AT1G33720.3 25.667 300 201 8 174 461 54 343 5.90e-16 80.1
Msa0823380 AT1G33720.5 25.667 300 201 8 174 461 54 343 5.90e-16 80.1
Msa0823380 AT5G24910.1 26.275 255 168 7 242 483 282 529 5.91e-16 80.9
Msa0823380 AT5G44620.1 24.080 299 209 11 173 461 192 482 6.77e-16 80.5
Msa0823380 AT3G26280.2 24.784 464 288 17 15 442 31 469 6.99e-16 80.5
Msa0823380 AT2G28860.1 22.800 500 301 18 27 486 34 488 8.89e-16 80.1
Msa0823380 AT4G15350.1 22.749 422 298 11 63 465 65 477 9.16e-16 80.1
Msa0823380 AT3G61040.1 30.303 198 127 5 259 448 258 452 1.07e-15 80.1
Msa0823380 AT5G04630.1 21.837 490 315 14 7 457 14 474 1.56e-15 79.3
Msa0823380 AT3G32047.1 22.869 481 333 14 5 464 16 479 1.96e-15 79.0
Msa0823380 AT1G64950.1 28.000 225 147 6 247 460 257 477 2.04e-15 79.0
Msa0823380 AT4G37360.1 23.276 464 319 18 11 457 12 455 3.73e-15 78.2
Msa0823380 AT3G20950.1 21.535 469 321 11 21 461 34 483 5.70e-15 77.8
Msa0823380 AT1G33730.1 24.749 299 205 8 174 461 50 339 8.37e-15 76.3
Msa0823380 AT1G33730.2 24.749 299 205 8 174 461 50 339 8.37e-15 76.3
Msa0823380 AT3G26270.1 28.452 239 150 8 235 461 241 470 1.04e-14 77.0
Msa0823380 AT3G20935.1 26.556 241 145 6 249 461 69 305 1.25e-14 75.5
Msa0823380 AT2G46950.1 25.974 231 157 6 241 464 323 546 1.92e-14 76.3
Msa0823380 AT2G12190.1 27.753 227 147 6 247 460 257 479 2.24e-14 75.9
Msa0823380 AT1G64930.1 28.293 205 133 5 266 460 278 478 2.33e-14 75.9
Msa0823380 AT2G45580.2 27.442 215 141 7 254 461 116 322 3.20e-14 74.3
Msa0823380 AT5G25130.1 23.260 503 342 19 6 488 6 484 3.76e-14 75.1
Msa0823380 AT4G27710.1 28.821 229 149 7 241 461 268 490 3.97e-14 75.1
Msa0823380 AT3G56630.1 24.601 313 193 13 169 457 173 466 4.14e-14 75.1
Msa0823380 AT2G45580.1 27.442 215 141 7 254 461 270 476 4.38e-14 75.1
Msa0823380 AT3G03470.1 28.497 193 128 4 280 462 288 480 6.13e-14 74.3
Msa0823380 AT3G10570.1 20.690 435 288 11 56 457 68 478 7.41e-14 74.3
Msa0823380 AT5G06905.1 21.937 506 332 18 10 474 9 492 7.96e-14 74.3
Msa0823380 AT1G50560.1 24.074 486 329 15 5 464 15 486 8.51e-14 73.9
Msa0823380 AT3G48300.1 20.853 422 296 14 63 466 58 459 1.01e-13 73.6
Msa0823380 AT3G48300.2 20.853 422 296 14 63 466 60 461 1.01e-13 73.6
Msa0823380 AT1G13110.1 22.899 476 294 19 6 438 3 448 1.02e-13 73.9
Msa0823380 AT3G14610.1 24.290 317 206 11 159 461 189 485 1.21e-13 73.6
Msa0823380 AT3G26330.1 22.998 487 330 15 27 487 29 496 1.92e-13 72.8
Msa0823380 AT3G20130.1 20.476 420 301 10 63 461 72 479 2.23e-13 72.8
Msa0823380 AT2G46960.1 26.275 255 170 7 241 485 154 400 2.39e-13 72.0
Msa0823380 AT1G13090.2 22.273 440 304 13 21 438 19 442 3.48e-13 72.0
Msa0823380 AT4G22710.1 22.518 413 295 15 64 460 84 487 5.52e-13 71.6
Msa0823380 AT1G11600.1 20.528 492 344 15 18 481 24 496 1.10e-12 70.5
Msa0823380 AT1G28430.1 22.378 429 300 14 44 450 51 468 1.11e-12 70.5
Msa0823380 AT5G36220.2 23.432 303 210 8 161 457 29 315 1.23e-12 69.7
Msa0823380 AT3G14690.1 21.615 421 271 14 65 461 100 485 2.28e-12 69.7
Msa0823380 AT3G14690.2 21.615 421 271 14 65 461 135 520 2.82e-12 69.3
Msa0823380 AT3G48520.1 23.548 310 197 12 169 457 178 468 3.09e-12 69.3
Msa0823380 AT5G38450.1 24.934 377 241 12 102 458 132 486 3.28e-12 68.9
Msa0823380 AT4G15380.1 22.782 417 283 12 63 457 72 471 3.87e-12 68.9
Msa0823380 AT5G07990.1 23.061 490 325 15 1 461 4 470 4.38e-12 68.6
Msa0823380 AT4G22690.1 22.034 413 297 15 64 460 115 518 6.78e-12 68.2
Msa0823380 AT1G74110.1 26.728 217 132 8 240 438 279 486 6.86e-12 68.2
Msa0823380 AT2G27010.1 22.560 461 283 17 63 488 65 486 1.15e-11 67.4
Msa0823380 AT1G58260.1 20.202 495 343 16 4 461 11 490 1.41e-11 67.0
Msa0823380 AT3G14650.1 24.783 230 162 5 238 461 261 485 1.50e-11 67.0
Msa0823380 AT1G33720.2 24.000 325 200 10 174 461 54 368 1.92e-11 66.2
Msa0823380 AT1G11610.2 23.029 482 320 18 22 482 26 477 2.69e-11 66.2
Msa0823380 AT1G11610.1 23.029 482 320 18 22 482 26 477 3.30e-11 65.9
Msa0823380 AT1G67110.1 26.146 371 237 10 102 458 133 480 3.55e-11 65.9
Msa0823380 AT4G36220.1 25.243 309 205 8 172 461 182 483 3.87e-11 65.9
Msa0823380 AT3G48290.1 21.446 415 292 13 63 461 62 458 5.04e-11 65.5
Msa0823380 AT3G26125.1 24.090 357 215 14 173 488 193 534 6.04e-11 65.1
Msa0823380 AT2G46660.1 26.768 198 119 7 256 438 290 476 6.72e-11 65.1

Find 125 sgRNAs with CRISPR-Local

Find 396 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTCAATCAATAATTA+AGG 0.150288 5_3:+62051751 Msa0823380:CDS
ATTTCAAAGCTGAGTTTATT+TGG 0.177572 5_3:+62050913 Msa0823380:CDS
TCACTTGGAATTCCCATTAT+TGG 0.200724 5_3:+62050808 Msa0823380:CDS
CAATTTCCTTTAACATGTTT+TGG 0.206785 5_3:-62051844 None:intergenic
CAATTTCCTTTAACATGTTT+TGG 0.206785 5_3:-62051889 None:intergenic
CCCTATTGCTTTGTTCCATT+TGG 0.221258 5_3:+62052903 Msa0823380:CDS
ATATGTGCAGCTGTTCTTAA+AGG 0.254244 5_3:+62052121 Msa0823380:CDS
TTTGGATCCTTGCACTCTTC+TGG 0.267496 5_3:-62051871 None:intergenic
GGATCAAACTGTGAAGGTTC+TGG 0.277530 5_3:-62052849 None:intergenic
TCTCGTATTCAACTTTCTTC+TGG 0.279210 5_3:-62051916 None:intergenic
GCCAAGACTTTGACCAATAA+TGG 0.291356 5_3:-62050821 None:intergenic
AATCAGTAGCTTGCTTAGTA+TGG 0.297529 5_3:+62051967 Msa0823380:CDS
TTCATTTACCTGCCACCCTT+TGG 0.299628 5_3:-62052711 None:intergenic
AATAAACTCAGCTTTGAAAT+AGG 0.306490 5_3:-62050910 None:intergenic
CCCTTAATTATTGATTGAAA+TGG 0.322436 5_3:-62051752 None:intergenic
TCATTTACCTGCCACCCTTT+GGG 0.336801 5_3:-62052710 None:intergenic
TTCTAATCACTTTCATTATC+CGG 0.339903 5_3:+62052077 Msa0823380:CDS
AAGGATCCAAAACATGTTAA+AGG 0.340489 5_3:+62051838 Msa0823380:CDS
AAGGATCCAAAACATGTTAA+AGG 0.340489 5_3:+62051883 Msa0823380:CDS
GATTAAGTCTTGGCGGGAAT+TGG 0.341640 5_3:-62051948 None:intergenic
CCATGACAAGCATAGCATTA+TGG 0.342858 5_3:-62052030 None:intergenic
TGAAAGTGAGAGTCTTCATT+AGG 0.347580 5_3:-62051667 None:intergenic
CAGTCAATTAAGATGATATT+AGG 0.348659 5_3:+62051021 Msa0823380:CDS
AAGTAGCTTACAACTGAATT+TGG 0.352974 5_3:-62053000 None:intergenic
ACTACAACAGATATTGAATA+TGG 0.357661 5_3:+62052674 Msa0823380:CDS
TGTGTAAAGGGTGCATTAAT+TGG 0.358712 5_3:-62051788 None:intergenic
TGAACCTGGAGGGACCCTTT+TGG 0.363172 5_3:-62050788 None:intergenic
TATTGCTTTGTTCCATTTGG+AGG 0.372232 5_3:+62052906 Msa0823380:CDS
GAAAGTGAGAGTCTTCATTA+GGG 0.375121 5_3:-62051666 None:intergenic
TCTTAATTGACTGTGTTTGC+TGG 0.376593 5_3:-62051011 None:intergenic
GTAAAATTGATGAAGAAGTT+AGG 0.382161 5_3:+62051142 Msa0823380:CDS
ATAATTTGTTCTCTACTGTT+TGG 0.388428 5_3:+62051692 Msa0823380:CDS
CACTTTCATTATCCGGCTCT+TGG 0.392385 5_3:+62052084 Msa0823380:CDS
GCTATGCTTGTCATGGTTGC+AGG 0.394164 5_3:+62052037 Msa0823380:CDS
CCTTGACTTGGTGTTGGCAT+TGG 0.399805 5_3:-62053047 None:intergenic
CCCATTATTGGTCAAAGTCT+TGG 0.402311 5_3:+62050820 Msa0823380:CDS
AAGACTCTGGCTTCAAGAAC+GGG 0.416106 5_3:-62051104 None:intergenic
GATCAAACTGTGAAGGTTCT+GGG 0.417095 5_3:-62052848 None:intergenic
TCCAAATGGAACAAAGCAAT+AGG 0.421660 5_3:-62052904 None:intergenic
GAAGACAGAATCAACAAGTA+TGG 0.428167 5_3:+62050886 Msa0823380:CDS
AGAGAACTGGAATGAGTAAG+AGG 0.433239 5_3:-62050741 None:intergenic
GATAGCTAAAGGCAAGCTCT+TGG 0.437620 5_3:+62052547 Msa0823380:CDS
GAGAGCTAAGATAGTTTCCT+TGG 0.437949 5_3:-62053089 None:intergenic
CCATTTCAATCAATAATTAA+GGG 0.443637 5_3:+62051752 Msa0823380:CDS
GTTTGCTAGGGTTGAAACTC+TGG 0.444311 5_3:+62052956 Msa0823380:CDS
CCAAGACTTTGACCAATAAT+GGG 0.446353 5_3:-62050820 None:intergenic
TTTCAGACAATTCTTTCAGC+AGG 0.447243 5_3:+62053021 Msa0823380:CDS
TTTCAAAGATGAAGTATACT+TGG 0.454805 5_3:+62052594 Msa0823380:CDS
AAAGAACCAAACCATCCAAA+AGG 0.460934 5_3:+62050773 Msa0823380:CDS
AACAATATTCTCATCGCGAT+TGG 0.464065 5_3:-62050986 None:intergenic
TGCTTTGTTCCATTTGGAGG+GGG 0.465672 5_3:+62052909 Msa0823380:CDS
ATTGCTTTGTTCCATTTGGA+GGG 0.470980 5_3:+62052907 Msa0823380:CDS
ATAGCTAAAGGCAAGCTCTT+GGG 0.475372 5_3:+62052548 Msa0823380:CDS
GGAGGCACATTCAGATGCAT+TGG 0.476070 5_3:+62051163 Msa0823380:CDS
GTGTAAAGGGTGCATTAATT+GGG 0.486122 5_3:-62051787 None:intergenic
AATAGGGTGGGGTAGATGCC+AGG 0.491827 5_3:-62052887 None:intergenic
AGGGTCCCTCCAGGTTCACT+TGG 0.493375 5_3:+62050793 Msa0823380:CDS
ACCCTAGCAAACTCATATCC+TGG 0.493624 5_3:-62052945 None:intergenic
TTGCACTCTCCTTGAGGCTG+CGG 0.494896 5_3:-62051817 None:intergenic
CATTATACCCAAAGGGTGGC+AGG 0.498119 5_3:+62052703 Msa0823380:CDS
GTCCAGGATATGAGTTTGCT+AGG 0.499490 5_3:+62052943 Msa0823380:CDS
GAGGCACATTCAGATGCATT+GGG 0.503281 5_3:+62051164 Msa0823380:CDS
AGAACAGCTGCACATATAGC+TGG 0.505191 5_3:-62052115 None:intergenic
ATGGGAATTCCAAGTGAACC+TGG 0.508975 5_3:-62050802 None:intergenic
TTGCTTAGTATGGTTGAAGA+TGG 0.509580 5_3:+62051977 Msa0823380:CDS
CCAAATGGAACAAAGCAATA+GGG 0.510553 5_3:-62052903 None:intergenic
TTCAGACAATTCTTTCAGCA+GGG 0.522736 5_3:+62053022 Msa0823380:CDS
AAAGACTCTGGCTTCAAGAA+CGG 0.523087 5_3:-62051105 None:intergenic
AAGAAGAACACTAGCCATCA+TGG 0.530283 5_3:-62050710 None:intergenic
AAGAACCAAACCATCCAAAA+GGG 0.531049 5_3:+62050774 Msa0823380:CDS
GTGGATACATTATACCCAAA+GGG 0.533054 5_3:+62052696 Msa0823380:CDS
TCCAAGTAGATTTGAAAACC+TGG 0.533843 5_3:+62052869 Msa0823380:CDS
GATAATGAAAGTGATTAGAA+TGG 0.534231 5_3:-62052074 None:intergenic
ACATATTGCTTCAAAGACTC+TGG 0.534467 5_3:-62051117 None:intergenic
CTACTGTTTGGTCTTGAGCG+TGG 0.535265 5_3:+62051704 Msa0823380:CDS
TTAAGATGATATTAGGCGAC+AGG 0.535591 5_3:+62051028 Msa0823380:CDS
CTGCGGTTGTAGTGTGTAAA+GGG 0.540198 5_3:-62051800 None:intergenic
GCAAGCTACTGATTAAGTCT+TGG 0.541480 5_3:-62051958 None:intergenic
GCTGCGGTTGTAGTGTGTAA+AGG 0.544877 5_3:-62051801 None:intergenic
AGAGCTAAGATAGTTTCCTT+GGG 0.546492 5_3:-62053088 None:intergenic
TCCAGGATATGAGTTTGCTA+GGG 0.548383 5_3:+62052944 Msa0823380:CDS
TTTCTGAATCCACCAAAGAT+GGG 0.552226 5_3:-62052650 None:intergenic
AGCTACTGATTAAGTCTTGG+CGG 0.552797 5_3:-62051955 None:intergenic
CCATCCAAAAGGGTCCCTCC+AGG 0.555753 5_3:+62050784 Msa0823380:CDS
GCTACTGATTAAGTCTTGGC+GGG 0.557526 5_3:-62051954 None:intergenic
AATCAATAATTAAGGGAATG+TGG 0.560339 5_3:+62051759 Msa0823380:CDS
TTGGGCAAAGTTCAATCAGT+AGG 0.560761 5_3:-62053070 None:intergenic
AAGTATACTTCATCTTTGAA+AGG 0.563144 5_3:-62052592 None:intergenic
CACATTCAGATGCATTGGGA+AGG 0.563148 5_3:+62051168 Msa0823380:CDS
GAACAGGAAGAGATAGCTAA+AGG 0.567417 5_3:+62052536 Msa0823380:intron
GGATCCTTGCACTCTCCTTG+AGG 0.567712 5_3:-62051823 None:intergenic
TCAATCAGTAGGCCTTGACT+TGG 0.569123 5_3:-62053059 None:intergenic
CTGGTTCATTAGCCAAGAGC+CGG 0.570121 5_3:-62052096 None:intergenic
TTGCTTTGTTCCATTTGGAG+GGG 0.575275 5_3:+62052908 Msa0823380:CDS
GTATACTTGGAGAGTAGCAA+TGG 0.576473 5_3:+62052607 Msa0823380:CDS
AGTAGGCCTTGACTTGGTGT+TGG 0.577020 5_3:-62053053 None:intergenic
AAAGATCATAGCAGAGTCAG+AGG 0.577259 5_3:+62051072 Msa0823380:CDS
CTACTTGGATCAAACTGTGA+AGG 0.583030 5_3:-62052855 None:intergenic
CCATAATGCTATGCTTGTCA+TGG 0.584435 5_3:+62052030 Msa0823380:CDS
TGGCGCGCATAGCACGAAGA+AGG 0.584948 5_3:-62050843 None:intergenic
TACAACTGAATTTGGTCACA+AGG 0.589571 5_3:-62052992 None:intergenic
ATGGAACAAAGCAATAGGGT+GGG 0.590236 5_3:-62052899 None:intergenic
ACACTACAACCGCAGCCTCA+AGG 0.596576 5_3:+62051808 Msa0823380:CDS
TACTGATTGAACTTTGCCCA+AGG 0.603194 5_3:+62053072 Msa0823380:CDS
TGCTAGGGTTGAAACTCTGG+TGG 0.603607 5_3:+62052959 Msa0823380:CDS
ACATTCAGATGCATTGGGAA+GGG 0.609178 5_3:+62051169 Msa0823380:CDS
TGTCCATGAATCAAAACAGT+TGG 0.610102 5_3:-62050940 None:intergenic
TTGTGCACCAGAAGAGTGCA+AGG 0.611836 5_3:+62051864 Msa0823380:CDS
GGAAGGGAAACAGCAGCTCA+AGG 0.612285 5_3:+62051185 Msa0823380:CDS
AATGGAACAAAGCAATAGGG+TGG 0.612767 5_3:-62052900 None:intergenic
GGTGGATACATTATACCCAA+AGG 0.613475 5_3:+62052695 Msa0823380:CDS
ACAACAGATATTGAATATGG+TGG 0.615515 5_3:+62052677 Msa0823380:CDS
CTTGGGAGAGACTCTAACAT+GGG 0.619914 5_3:+62052565 Msa0823380:CDS
GAGTCTTTGAAGCAATATGT+TGG 0.626184 5_3:+62051120 Msa0823380:CDS
GCAGCCTCAAGGAGAGTGCA+AGG 0.626274 5_3:+62051819 Msa0823380:CDS
TAGCAATGGAAACTCTGAGA+AGG 0.628710 5_3:+62052621 Msa0823380:CDS
GGTTACATCAATGACTCACA+TGG 0.634614 5_3:+62052812 Msa0823380:CDS
TGGAACAAAGCAATAGGGTG+GGG 0.639436 5_3:-62052898 None:intergenic
TCTTGGGAGAGACTCTAACA+TGG 0.644772 5_3:+62052564 Msa0823380:CDS
GAATTCCAAGTGAACCTGGA+GGG 0.647416 5_3:-62050798 None:intergenic
CCAATGCCAACACCAAGTCA+AGG 0.656183 5_3:+62053047 Msa0823380:CDS
AAATTGATGAAGAAGTTAGG+AGG 0.660620 5_3:+62051145 Msa0823380:CDS
AAAGTGAGAGTCTTCATTAG+GGG 0.663881 5_3:-62051665 None:intergenic
GATACATTATACCCAAAGGG+TGG 0.706221 5_3:+62052699 Msa0823380:CDS
GGAATTCCAAGTGAACCTGG+AGG 0.730756 5_3:-62050799 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTCTGAT+AGG + chr5_3:62051637-62051656 Msa0823380:intron 10.0%
!!! TTTTTTTTTTTTTTTCTGAT+AGG + chr5_3:62051637-62051656 Msa0823380:intron 10.0%
!!! TTTTCTTTTTATAGATCTTT+TGG + chr5_3:62052790-62052809 Msa0823380:intron 15.0%
!!! TTTCTTTTTATAGATCTTTT+GGG + chr5_3:62052791-62052810 Msa0823380:intron 15.0%
!!! TTTTCTTTTTATAGATCTTT+TGG + chr5_3:62052790-62052809 Msa0823380:intron 15.0%
!!! TTTCTTTTTATAGATCTTTT+GGG + chr5_3:62052791-62052810 Msa0823380:intron 15.0%
!! CAAAAGCTAATAAAAATACA+TGG + chr5_3:62051234-62051253 Msa0823380:intron 20.0%
!! TATGTTAATGTGTATTTACT+TGG - chr5_3:62051380-62051399 None:intergenic 20.0%
!!! ACTTGATTACATATTCTTTT+TGG + chr5_3:62051574-62051593 Msa0823380:intron 20.0%
!!! CTTGATTACATATTCTTTTT+GGG + chr5_3:62051575-62051594 Msa0823380:intron 20.0%
!! TCCATTTCAATCAATAATTA+AGG + chr5_3:62051751-62051770 Msa0823380:CDS 20.0%
!! CCATTTCAATCAATAATTAA+GGG + chr5_3:62051752-62051771 Msa0823380:CDS 20.0%
!! AGAGAAAACGAAAAAAATTT+AGG + chr5_3:62052271-62052290 Msa0823380:intron 20.0%
!! GAGAAAACGAAAAAAATTTA+GGG + chr5_3:62052272-62052291 Msa0823380:intron 20.0%
!! AGAAAACGAAAAAAATTTAG+GGG + chr5_3:62052273-62052292 Msa0823380:intron 20.0%
!! CAAAAGCTAATAAAAATACA+TGG + chr5_3:62051234-62051253 Msa0823380:intron 20.0%
!! TATGTTAATGTGTATTTACT+TGG - chr5_3:62051380-62051399 None:intergenic 20.0%
!!! ACTTGATTACATATTCTTTT+TGG + chr5_3:62051574-62051593 Msa0823380:intron 20.0%
!!! CTTGATTACATATTCTTTTT+GGG + chr5_3:62051575-62051594 Msa0823380:intron 20.0%
!! TCCATTTCAATCAATAATTA+AGG + chr5_3:62051751-62051770 Msa0823380:CDS 20.0%
!! CCATTTCAATCAATAATTAA+GGG + chr5_3:62051752-62051771 Msa0823380:CDS 20.0%
!! AGAGAAAACGAAAAAAATTT+AGG + chr5_3:62052271-62052290 Msa0823380:intron 20.0%
!! GAGAAAACGAAAAAAATTTA+GGG + chr5_3:62052272-62052291 Msa0823380:intron 20.0%
!! AGAAAACGAAAAAAATTTAG+GGG + chr5_3:62052273-62052292 Msa0823380:intron 20.0%
!!! AATAAACTCAGCTTTGAAAT+AGG - chr5_3:62050913-62050932 None:intergenic 25.0%
! ATTTCAAAGCTGAGTTTATT+TGG + chr5_3:62050913-62050932 Msa0823380:CDS 25.0%
! CAGTCAATTAAGATGATATT+AGG + chr5_3:62051021-62051040 Msa0823380:CDS 25.0%
! GTAAAATTGATGAAGAAGTT+AGG + chr5_3:62051142-62051161 Msa0823380:CDS 25.0%
! TACAATACTAGTACAGATAT+GGG + chr5_3:62051329-62051348 Msa0823380:intron 25.0%
!!! TTGGTCATTTTAGAAAAATC+CGG - chr5_3:62051361-62051380 None:intergenic 25.0%
! ATGACTTGATTTACTTGAAT+AGG + chr5_3:62051483-62051502 Msa0823380:intron 25.0%
! AGTAGTATTAAGTTACTTGA+TGG + chr5_3:62051514-62051533 Msa0823380:intron 25.0%
! GTAGTATTAAGTTACTTGAT+GGG + chr5_3:62051515-62051534 Msa0823380:intron 25.0%
! TAAGAAATGAAAACTGAAGT+AGG + chr5_3:62051599-62051618 Msa0823380:intron 25.0%
!!! ATAATTTGTTCTCTACTGTT+TGG + chr5_3:62051692-62051711 Msa0823380:CDS 25.0%
!! CCCTTAATTATTGATTGAAA+TGG - chr5_3:62051755-62051774 None:intergenic 25.0%
! AATCAATAATTAAGGGAATG+TGG + chr5_3:62051759-62051778 Msa0823380:CDS 25.0%
!! CAATTTCCTTTAACATGTTT+TGG - chr5_3:62051847-62051866 None:intergenic 25.0%
!! CAATTTCCTTTAACATGTTT+TGG - chr5_3:62051847-62051866 None:intergenic 25.0%
! AAAGTTGAATACGAGAAAAA+TGG + chr5_3:62051923-62051942 Msa0823380:CDS 25.0%
! GATAATGAAAGTGATTAGAA+TGG - chr5_3:62052077-62052096 None:intergenic 25.0%
! TTCTAATCACTTTCATTATC+CGG + chr5_3:62052077-62052096 Msa0823380:CDS 25.0%
! AAAAAATTTAGGGGATGTAA+AGG + chr5_3:62052282-62052301 Msa0823380:intron 25.0%
! ATCGAGAATACTTAAAATGA+AGG + chr5_3:62052478-62052497 Msa0823380:intron 25.0%
! AAGTATACTTCATCTTTGAA+AGG - chr5_3:62052595-62052614 None:intergenic 25.0%
! TTTCAAAGATGAAGTATACT+TGG + chr5_3:62052594-62052613 Msa0823380:CDS 25.0%
! ACTACAACAGATATTGAATA+TGG + chr5_3:62052674-62052693 Msa0823380:CDS 25.0%
!!! AATAAACTCAGCTTTGAAAT+AGG - chr5_3:62050913-62050932 None:intergenic 25.0%
! ATTTCAAAGCTGAGTTTATT+TGG + chr5_3:62050913-62050932 Msa0823380:CDS 25.0%
! CAGTCAATTAAGATGATATT+AGG + chr5_3:62051021-62051040 Msa0823380:CDS 25.0%
! GTAAAATTGATGAAGAAGTT+AGG + chr5_3:62051142-62051161 Msa0823380:CDS 25.0%
! TACAATACTAGTACAGATAT+GGG + chr5_3:62051329-62051348 Msa0823380:intron 25.0%
!!! TTGGTCATTTTAGAAAAATC+CGG - chr5_3:62051361-62051380 None:intergenic 25.0%
! ATGACTTGATTTACTTGAAT+AGG + chr5_3:62051483-62051502 Msa0823380:intron 25.0%
! AGTAGTATTAAGTTACTTGA+TGG + chr5_3:62051514-62051533 Msa0823380:intron 25.0%
! GTAGTATTAAGTTACTTGAT+GGG + chr5_3:62051515-62051534 Msa0823380:intron 25.0%
! TAAGAAATGAAAACTGAAGT+AGG + chr5_3:62051599-62051618 Msa0823380:intron 25.0%
!!! ATAATTTGTTCTCTACTGTT+TGG + chr5_3:62051692-62051711 Msa0823380:CDS 25.0%
!! CCCTTAATTATTGATTGAAA+TGG - chr5_3:62051755-62051774 None:intergenic 25.0%
! AATCAATAATTAAGGGAATG+TGG + chr5_3:62051759-62051778 Msa0823380:CDS 25.0%
!! CAATTTCCTTTAACATGTTT+TGG - chr5_3:62051847-62051866 None:intergenic 25.0%
!! CAATTTCCTTTAACATGTTT+TGG - chr5_3:62051847-62051866 None:intergenic 25.0%
! AAAGTTGAATACGAGAAAAA+TGG + chr5_3:62051923-62051942 Msa0823380:CDS 25.0%
! GATAATGAAAGTGATTAGAA+TGG - chr5_3:62052077-62052096 None:intergenic 25.0%
! TTCTAATCACTTTCATTATC+CGG + chr5_3:62052077-62052096 Msa0823380:CDS 25.0%
! AAAAAATTTAGGGGATGTAA+AGG + chr5_3:62052282-62052301 Msa0823380:intron 25.0%
! ATCGAGAATACTTAAAATGA+AGG + chr5_3:62052478-62052497 Msa0823380:intron 25.0%
! AAGTATACTTCATCTTTGAA+AGG - chr5_3:62052595-62052614 None:intergenic 25.0%
! TTTCAAAGATGAAGTATACT+TGG + chr5_3:62052594-62052613 Msa0823380:CDS 25.0%
! ACTACAACAGATATTGAATA+TGG + chr5_3:62052674-62052693 Msa0823380:CDS 25.0%
AAATTGATGAAGAAGTTAGG+AGG + chr5_3:62051145-62051164 Msa0823380:CDS 30.0%
! AAATACATGGTGTTAACTTG+TGG + chr5_3:62051247-62051266 Msa0823380:intron 30.0%
!! GTTAACTTGTGGTAATCTAT+AGG + chr5_3:62051258-62051277 Msa0823380:intron 30.0%
GTACAATACTAGTACAGATA+TGG + chr5_3:62051328-62051347 Msa0823380:intron 30.0%
AAGGATCCAAAACATGTTAA+AGG + chr5_3:62051838-62051857 Msa0823380:CDS 30.0%
AAGGATCCAAAACATGTTAA+AGG + chr5_3:62051838-62051857 Msa0823380:CDS 30.0%
TTGTATGTCTCTCCTAAATT+TGG - chr5_3:62052327-62052346 None:intergenic 30.0%
AAATGAAGGCAAAGAAATCT+TGG + chr5_3:62052492-62052511 Msa0823380:intron 30.0%
! GATTTTTATGATTGCAGAAC+AGG + chr5_3:62052520-62052539 Msa0823380:intron 30.0%
ACAACAGATATTGAATATGG+TGG + chr5_3:62052677-62052696 Msa0823380:CDS 30.0%
AAGTAGCTTACAACTGAATT+TGG - chr5_3:62053003-62053022 None:intergenic 30.0%
AAATTGATGAAGAAGTTAGG+AGG + chr5_3:62051145-62051164 Msa0823380:CDS 30.0%
! AAATACATGGTGTTAACTTG+TGG + chr5_3:62051247-62051266 Msa0823380:intron 30.0%
!! GTTAACTTGTGGTAATCTAT+AGG + chr5_3:62051258-62051277 Msa0823380:intron 30.0%
GTACAATACTAGTACAGATA+TGG + chr5_3:62051328-62051347 Msa0823380:intron 30.0%
AAGGATCCAAAACATGTTAA+AGG + chr5_3:62051838-62051857 Msa0823380:CDS 30.0%
AAGGATCCAAAACATGTTAA+AGG + chr5_3:62051838-62051857 Msa0823380:CDS 30.0%
TTGTATGTCTCTCCTAAATT+TGG - chr5_3:62052327-62052346 None:intergenic 30.0%
AAATGAAGGCAAAGAAATCT+TGG + chr5_3:62052492-62052511 Msa0823380:intron 30.0%
! GATTTTTATGATTGCAGAAC+AGG + chr5_3:62052520-62052539 Msa0823380:intron 30.0%
ACAACAGATATTGAATATGG+TGG + chr5_3:62052677-62052696 Msa0823380:CDS 30.0%
AAGTAGCTTACAACTGAATT+TGG - chr5_3:62053003-62053022 None:intergenic 30.0%
!! CTTTTTAGCAGAAAGAGAAC+TGG - chr5_3:62050757-62050776 None:intergenic 35.0%
AAAGAACCAAACCATCCAAA+AGG + chr5_3:62050773-62050792 Msa0823380:CDS 35.0%
AAGAACCAAACCATCCAAAA+GGG + chr5_3:62050774-62050793 Msa0823380:CDS 35.0%
TCACTTGGAATTCCCATTAT+TGG + chr5_3:62050808-62050827 Msa0823380:CDS 35.0%
CCAAGACTTTGACCAATAAT+GGG - chr5_3:62050823-62050842 None:intergenic 35.0%
GAAGACAGAATCAACAAGTA+TGG + chr5_3:62050886-62050905 Msa0823380:CDS 35.0%
!!! ACACCAACTGTTTTGATTCA+TGG + chr5_3:62050937-62050956 Msa0823380:CDS 35.0%
TGTCCATGAATCAAAACAGT+TGG - chr5_3:62050943-62050962 None:intergenic 35.0%
!!! AACTGTTTTGATTCATGGAC+AGG + chr5_3:62050942-62050961 Msa0823380:CDS 35.0%
AACAATATTCTCATCGCGAT+TGG - chr5_3:62050989-62051008 None:intergenic 35.0%
TCTTAATTGACTGTGTTTGC+TGG - chr5_3:62051014-62051033 None:intergenic 35.0%
TTAAGATGATATTAGGCGAC+AGG + chr5_3:62051028-62051047 Msa0823380:CDS 35.0%
ACATATTGCTTCAAAGACTC+TGG - chr5_3:62051120-62051139 None:intergenic 35.0%
!! GAGTCTTTGAAGCAATATGT+TGG + chr5_3:62051120-62051139 Msa0823380:CDS 35.0%
CTTGTGGTAATCTATAGGAT+CGG + chr5_3:62051263-62051282 Msa0823380:intron 35.0%
CAGATAGATTGTCCATTAAC+TGG - chr5_3:62051296-62051315 None:intergenic 35.0%
! CAGTTAATGGACAATCTATC+TGG + chr5_3:62051294-62051313 Msa0823380:intron 35.0%
AAAGTGAGAGTCTTCATTAG+GGG - chr5_3:62051668-62051687 None:intergenic 35.0%
GAAAGTGAGAGTCTTCATTA+GGG - chr5_3:62051669-62051688 None:intergenic 35.0%
TGAAAGTGAGAGTCTTCATT+AGG - chr5_3:62051670-62051689 None:intergenic 35.0%
! GTGTAAAGGGTGCATTAATT+GGG - chr5_3:62051790-62051809 None:intergenic 35.0%
! TGTGTAAAGGGTGCATTAAT+TGG - chr5_3:62051791-62051810 None:intergenic 35.0%
TCTCGTATTCAACTTTCTTC+TGG - chr5_3:62051919-62051938 None:intergenic 35.0%
!! AATCAGTAGCTTGCTTAGTA+TGG + chr5_3:62051967-62051986 Msa0823380:CDS 35.0%
TTGCTTAGTATGGTTGAAGA+TGG + chr5_3:62051977-62051996 Msa0823380:CDS 35.0%
ATATGTGCAGCTGTTCTTAA+AGG + chr5_3:62052121-62052140 Msa0823380:CDS 35.0%
AGCCTACAGAAGGAAAAATT+AGG + chr5_3:62052227-62052246 Msa0823380:intron 35.0%
GCCTACAGAAGGAAAAATTA+GGG + chr5_3:62052228-62052247 Msa0823380:intron 35.0%
! ACCCTAATTTTTCCTTCTGT+AGG - chr5_3:62052232-62052251 None:intergenic 35.0%
TACAGAAGGAAAAATTAGGG+TGG + chr5_3:62052231-62052250 Msa0823380:intron 35.0%
ACAGAAGGAAAAATTAGGGT+GGG + chr5_3:62052232-62052251 Msa0823380:intron 35.0%
AAATTTAGGGGATGTAAAGG+AGG + chr5_3:62052285-62052304 Msa0823380:intron 35.0%
TTTAGGAGAGACATACAAAC+AGG + chr5_3:62052329-62052348 Msa0823380:intron 35.0%
TCTTGCAAAATCTCAACTGT+CGG + chr5_3:62052378-62052397 Msa0823380:intron 35.0%
TTTCTGAATCCACCAAAGAT+GGG - chr5_3:62052653-62052672 None:intergenic 35.0%
! TTTTCTGAATCCACCAAAGA+TGG - chr5_3:62052654-62052673 None:intergenic 35.0%
GTGGATACATTATACCCAAA+GGG + chr5_3:62052696-62052715 Msa0823380:CDS 35.0%
TCCAAGTAGATTTGAAAACC+TGG + chr5_3:62052869-62052888 Msa0823380:CDS 35.0%
CCAAATGGAACAAAGCAATA+GGG - chr5_3:62052906-62052925 None:intergenic 35.0%
TCCAAATGGAACAAAGCAAT+AGG - chr5_3:62052907-62052926 None:intergenic 35.0%
! TATTGCTTTGTTCCATTTGG+AGG + chr5_3:62052906-62052925 Msa0823380:CDS 35.0%
! ATTGCTTTGTTCCATTTGGA+GGG + chr5_3:62052907-62052926 Msa0823380:CDS 35.0%
TACAACTGAATTTGGTCACA+AGG - chr5_3:62052995-62053014 None:intergenic 35.0%
TTTCAGACAATTCTTTCAGC+AGG + chr5_3:62053021-62053040 Msa0823380:CDS 35.0%
TTCAGACAATTCTTTCAGCA+GGG + chr5_3:62053022-62053041 Msa0823380:CDS 35.0%
!! CTTTTTAGCAGAAAGAGAAC+TGG - chr5_3:62050757-62050776 None:intergenic 35.0%
AAAGAACCAAACCATCCAAA+AGG + chr5_3:62050773-62050792 Msa0823380:CDS 35.0%
AAGAACCAAACCATCCAAAA+GGG + chr5_3:62050774-62050793 Msa0823380:CDS 35.0%
TCACTTGGAATTCCCATTAT+TGG + chr5_3:62050808-62050827 Msa0823380:CDS 35.0%
CCAAGACTTTGACCAATAAT+GGG - chr5_3:62050823-62050842 None:intergenic 35.0%
GAAGACAGAATCAACAAGTA+TGG + chr5_3:62050886-62050905 Msa0823380:CDS 35.0%
!!! ACACCAACTGTTTTGATTCA+TGG + chr5_3:62050937-62050956 Msa0823380:CDS 35.0%
TGTCCATGAATCAAAACAGT+TGG - chr5_3:62050943-62050962 None:intergenic 35.0%
!!! AACTGTTTTGATTCATGGAC+AGG + chr5_3:62050942-62050961 Msa0823380:CDS 35.0%
AACAATATTCTCATCGCGAT+TGG - chr5_3:62050989-62051008 None:intergenic 35.0%
TCTTAATTGACTGTGTTTGC+TGG - chr5_3:62051014-62051033 None:intergenic 35.0%
TTAAGATGATATTAGGCGAC+AGG + chr5_3:62051028-62051047 Msa0823380:CDS 35.0%
ACATATTGCTTCAAAGACTC+TGG - chr5_3:62051120-62051139 None:intergenic 35.0%
!! GAGTCTTTGAAGCAATATGT+TGG + chr5_3:62051120-62051139 Msa0823380:CDS 35.0%
CTTGTGGTAATCTATAGGAT+CGG + chr5_3:62051263-62051282 Msa0823380:intron 35.0%
CAGATAGATTGTCCATTAAC+TGG - chr5_3:62051296-62051315 None:intergenic 35.0%
! CAGTTAATGGACAATCTATC+TGG + chr5_3:62051294-62051313 Msa0823380:intron 35.0%
AAAGTGAGAGTCTTCATTAG+GGG - chr5_3:62051668-62051687 None:intergenic 35.0%
GAAAGTGAGAGTCTTCATTA+GGG - chr5_3:62051669-62051688 None:intergenic 35.0%
TGAAAGTGAGAGTCTTCATT+AGG - chr5_3:62051670-62051689 None:intergenic 35.0%
! GTGTAAAGGGTGCATTAATT+GGG - chr5_3:62051790-62051809 None:intergenic 35.0%
! TGTGTAAAGGGTGCATTAAT+TGG - chr5_3:62051791-62051810 None:intergenic 35.0%
TCTCGTATTCAACTTTCTTC+TGG - chr5_3:62051919-62051938 None:intergenic 35.0%
!! AATCAGTAGCTTGCTTAGTA+TGG + chr5_3:62051967-62051986 Msa0823380:CDS 35.0%
TTGCTTAGTATGGTTGAAGA+TGG + chr5_3:62051977-62051996 Msa0823380:CDS 35.0%
ATATGTGCAGCTGTTCTTAA+AGG + chr5_3:62052121-62052140 Msa0823380:CDS 35.0%
AGCCTACAGAAGGAAAAATT+AGG + chr5_3:62052227-62052246 Msa0823380:intron 35.0%
GCCTACAGAAGGAAAAATTA+GGG + chr5_3:62052228-62052247 Msa0823380:intron 35.0%
! ACCCTAATTTTTCCTTCTGT+AGG - chr5_3:62052232-62052251 None:intergenic 35.0%
TACAGAAGGAAAAATTAGGG+TGG + chr5_3:62052231-62052250 Msa0823380:intron 35.0%
ACAGAAGGAAAAATTAGGGT+GGG + chr5_3:62052232-62052251 Msa0823380:intron 35.0%
AAATTTAGGGGATGTAAAGG+AGG + chr5_3:62052285-62052304 Msa0823380:intron 35.0%
TTTAGGAGAGACATACAAAC+AGG + chr5_3:62052329-62052348 Msa0823380:intron 35.0%
TCTTGCAAAATCTCAACTGT+CGG + chr5_3:62052378-62052397 Msa0823380:intron 35.0%
TTTCTGAATCCACCAAAGAT+GGG - chr5_3:62052653-62052672 None:intergenic 35.0%
! TTTTCTGAATCCACCAAAGA+TGG - chr5_3:62052654-62052673 None:intergenic 35.0%
GTGGATACATTATACCCAAA+GGG + chr5_3:62052696-62052715 Msa0823380:CDS 35.0%
TCCAAGTAGATTTGAAAACC+TGG + chr5_3:62052869-62052888 Msa0823380:CDS 35.0%
CCAAATGGAACAAAGCAATA+GGG - chr5_3:62052906-62052925 None:intergenic 35.0%
TCCAAATGGAACAAAGCAAT+AGG - chr5_3:62052907-62052926 None:intergenic 35.0%
! TATTGCTTTGTTCCATTTGG+AGG + chr5_3:62052906-62052925 Msa0823380:CDS 35.0%
! ATTGCTTTGTTCCATTTGGA+GGG + chr5_3:62052907-62052926 Msa0823380:CDS 35.0%
TACAACTGAATTTGGTCACA+AGG - chr5_3:62052995-62053014 None:intergenic 35.0%
TTTCAGACAATTCTTTCAGC+AGG + chr5_3:62053021-62053040 Msa0823380:CDS 35.0%
TTCAGACAATTCTTTCAGCA+GGG + chr5_3:62053022-62053041 Msa0823380:CDS 35.0%
AGAGAACTGGAATGAGTAAG+AGG - chr5_3:62050744-62050763 None:intergenic 40.0%
CCCATTATTGGTCAAAGTCT+TGG + chr5_3:62050820-62050839 Msa0823380:CDS 40.0%
GCCAAGACTTTGACCAATAA+TGG - chr5_3:62050824-62050843 None:intergenic 40.0%
AAAGATCATAGCAGAGTCAG+AGG + chr5_3:62051072-62051091 Msa0823380:CDS 40.0%
! AAAGACTCTGGCTTCAAGAA+CGG - chr5_3:62051108-62051127 None:intergenic 40.0%
ACATTCAGATGCATTGGGAA+GGG + chr5_3:62051169-62051188 Msa0823380:CDS 40.0%
AGATTGTCCATTAACTGGAG+AGG - chr5_3:62051291-62051310 None:intergenic 40.0%
!! CAATCTATCTGGTATCGACA+CGG + chr5_3:62051305-62051324 Msa0823380:intron 40.0%
!! AATCTATCTGGTATCGACAC+GGG + chr5_3:62051306-62051325 Msa0823380:intron 40.0%
ATACTAGTACAGATATGGGC+AGG + chr5_3:62051333-62051352 Msa0823380:intron 40.0%
TACTAGTACAGATATGGGCA+GGG + chr5_3:62051334-62051353 Msa0823380:intron 40.0%
TAGACAGAGATCTGATTCAG+AGG + chr5_3:62051456-62051475 Msa0823380:intron 40.0%
AGACAGAGATCTGATTCAGA+GGG + chr5_3:62051457-62051476 Msa0823380:intron 40.0%
! AGCTACTGATTAAGTCTTGG+CGG - chr5_3:62051958-62051977 None:intergenic 40.0%
! GCAAGCTACTGATTAAGTCT+TGG - chr5_3:62051961-62051980 None:intergenic 40.0%
CCATGACAAGCATAGCATTA+TGG - chr5_3:62052033-62052052 None:intergenic 40.0%
CCATAATGCTATGCTTGTCA+TGG + chr5_3:62052030-62052049 Msa0823380:CDS 40.0%
ATGTAAAGGAGGCTGTATTG+CGG + chr5_3:62052296-62052315 Msa0823380:intron 40.0%
ATTGCGGAGGATCCAAATTT+AGG + chr5_3:62052312-62052331 Msa0823380:intron 40.0%
!! AACTGTCGGATTAGTCTAGA+GGG + chr5_3:62052392-62052411 Msa0823380:intron 40.0%
GAACAGGAAGAGATAGCTAA+AGG + chr5_3:62052536-62052555 Msa0823380:intron 40.0%
ATAGCTAAAGGCAAGCTCTT+GGG + chr5_3:62052548-62052567 Msa0823380:CDS 40.0%
GTATACTTGGAGAGTAGCAA+TGG + chr5_3:62052607-62052626 Msa0823380:CDS 40.0%
! TAGCAATGGAAACTCTGAGA+AGG + chr5_3:62052621-62052640 Msa0823380:CDS 40.0%
! AGAAGGTTTTCTCCCATCTT+TGG + chr5_3:62052638-62052657 Msa0823380:CDS 40.0%
GGTGGATACATTATACCCAA+AGG + chr5_3:62052695-62052714 Msa0823380:CDS 40.0%
GATACATTATACCCAAAGGG+TGG + chr5_3:62052699-62052718 Msa0823380:CDS 40.0%
GGTTACATCAATGACTCACA+TGG + chr5_3:62052812-62052831 Msa0823380:CDS 40.0%
GATCAAACTGTGAAGGTTCT+GGG - chr5_3:62052851-62052870 None:intergenic 40.0%
CTACTTGGATCAAACTGTGA+AGG - chr5_3:62052858-62052877 None:intergenic 40.0%
! GCCAGGTTTTCAAATCTACT+TGG - chr5_3:62052873-62052892 None:intergenic 40.0%
ATGGAACAAAGCAATAGGGT+GGG - chr5_3:62052902-62052921 None:intergenic 40.0%
AATGGAACAAAGCAATAGGG+TGG - chr5_3:62052903-62052922 None:intergenic 40.0%
! CCCTATTGCTTTGTTCCATT+TGG + chr5_3:62052903-62052922 Msa0823380:CDS 40.0%
! TTGCTTTGTTCCATTTGGAG+GGG + chr5_3:62052908-62052927 Msa0823380:CDS 40.0%
!! TCCAGGATATGAGTTTGCTA+GGG + chr5_3:62052944-62052963 Msa0823380:CDS 40.0%
TTGGGCAAAGTTCAATCAGT+AGG - chr5_3:62053073-62053092 None:intergenic 40.0%
! TACTGATTGAACTTTGCCCA+AGG + chr5_3:62053072-62053091 Msa0823380:CDS 40.0%
AGAGAACTGGAATGAGTAAG+AGG - chr5_3:62050744-62050763 None:intergenic 40.0%
CCCATTATTGGTCAAAGTCT+TGG + chr5_3:62050820-62050839 Msa0823380:CDS 40.0%
GCCAAGACTTTGACCAATAA+TGG - chr5_3:62050824-62050843 None:intergenic 40.0%
AAAGATCATAGCAGAGTCAG+AGG + chr5_3:62051072-62051091 Msa0823380:CDS 40.0%
! AAAGACTCTGGCTTCAAGAA+CGG - chr5_3:62051108-62051127 None:intergenic 40.0%
ACATTCAGATGCATTGGGAA+GGG + chr5_3:62051169-62051188 Msa0823380:CDS 40.0%
AGATTGTCCATTAACTGGAG+AGG - chr5_3:62051291-62051310 None:intergenic 40.0%
!! CAATCTATCTGGTATCGACA+CGG + chr5_3:62051305-62051324 Msa0823380:intron 40.0%
!! AATCTATCTGGTATCGACAC+GGG + chr5_3:62051306-62051325 Msa0823380:intron 40.0%
ATACTAGTACAGATATGGGC+AGG + chr5_3:62051333-62051352 Msa0823380:intron 40.0%
TACTAGTACAGATATGGGCA+GGG + chr5_3:62051334-62051353 Msa0823380:intron 40.0%
TAGACAGAGATCTGATTCAG+AGG + chr5_3:62051456-62051475 Msa0823380:intron 40.0%
AGACAGAGATCTGATTCAGA+GGG + chr5_3:62051457-62051476 Msa0823380:intron 40.0%
! AGCTACTGATTAAGTCTTGG+CGG - chr5_3:62051958-62051977 None:intergenic 40.0%
! GCAAGCTACTGATTAAGTCT+TGG - chr5_3:62051961-62051980 None:intergenic 40.0%
CCATGACAAGCATAGCATTA+TGG - chr5_3:62052033-62052052 None:intergenic 40.0%
CCATAATGCTATGCTTGTCA+TGG + chr5_3:62052030-62052049 Msa0823380:CDS 40.0%
ATGTAAAGGAGGCTGTATTG+CGG + chr5_3:62052296-62052315 Msa0823380:intron 40.0%
ATTGCGGAGGATCCAAATTT+AGG + chr5_3:62052312-62052331 Msa0823380:intron 40.0%
!! AACTGTCGGATTAGTCTAGA+GGG + chr5_3:62052392-62052411 Msa0823380:intron 40.0%
GAACAGGAAGAGATAGCTAA+AGG + chr5_3:62052536-62052555 Msa0823380:intron 40.0%
ATAGCTAAAGGCAAGCTCTT+GGG + chr5_3:62052548-62052567 Msa0823380:CDS 40.0%
GTATACTTGGAGAGTAGCAA+TGG + chr5_3:62052607-62052626 Msa0823380:CDS 40.0%
! TAGCAATGGAAACTCTGAGA+AGG + chr5_3:62052621-62052640 Msa0823380:CDS 40.0%
! AGAAGGTTTTCTCCCATCTT+TGG + chr5_3:62052638-62052657 Msa0823380:CDS 40.0%
GGTGGATACATTATACCCAA+AGG + chr5_3:62052695-62052714 Msa0823380:CDS 40.0%
GATACATTATACCCAAAGGG+TGG + chr5_3:62052699-62052718 Msa0823380:CDS 40.0%
GGTTACATCAATGACTCACA+TGG + chr5_3:62052812-62052831 Msa0823380:CDS 40.0%
GATCAAACTGTGAAGGTTCT+GGG - chr5_3:62052851-62052870 None:intergenic 40.0%
CTACTTGGATCAAACTGTGA+AGG - chr5_3:62052858-62052877 None:intergenic 40.0%
! GCCAGGTTTTCAAATCTACT+TGG - chr5_3:62052873-62052892 None:intergenic 40.0%
ATGGAACAAAGCAATAGGGT+GGG - chr5_3:62052902-62052921 None:intergenic 40.0%
AATGGAACAAAGCAATAGGG+TGG - chr5_3:62052903-62052922 None:intergenic 40.0%
! CCCTATTGCTTTGTTCCATT+TGG + chr5_3:62052903-62052922 Msa0823380:CDS 40.0%
! TTGCTTTGTTCCATTTGGAG+GGG + chr5_3:62052908-62052927 Msa0823380:CDS 40.0%
!! TCCAGGATATGAGTTTGCTA+GGG + chr5_3:62052944-62052963 Msa0823380:CDS 40.0%
TTGGGCAAAGTTCAATCAGT+AGG - chr5_3:62053073-62053092 None:intergenic 40.0%
! TACTGATTGAACTTTGCCCA+AGG + chr5_3:62053072-62053091 Msa0823380:CDS 40.0%
GAATTCCAAGTGAACCTGGA+GGG - chr5_3:62050801-62050820 None:intergenic 45.0%
ATGGGAATTCCAAGTGAACC+TGG - chr5_3:62050805-62050824 None:intergenic 45.0%
!! GTCTTCCACCCATTTTTCTG+CGG - chr5_3:62050872-62050891 None:intergenic 45.0%
! AAGACTCTGGCTTCAAGAAC+GGG - chr5_3:62051107-62051126 None:intergenic 45.0%
GAGGCACATTCAGATGCATT+GGG + chr5_3:62051164-62051183 Msa0823380:CDS 45.0%
CACATTCAGATGCATTGGGA+AGG + chr5_3:62051168-62051187 Msa0823380:CDS 45.0%
ATCGGATCCTCTCCAGTTAA+TGG + chr5_3:62051281-62051300 Msa0823380:intron 45.0%
ACTAGTACAGATATGGGCAG+GGG + chr5_3:62051335-62051354 Msa0823380:intron 45.0%
CTGCGGTTGTAGTGTGTAAA+GGG - chr5_3:62051803-62051822 None:intergenic 45.0%
TTTGGATCCTTGCACTCTTC+TGG - chr5_3:62051874-62051893 None:intergenic 45.0%
GATTAAGTCTTGGCGGGAAT+TGG - chr5_3:62051951-62051970 None:intergenic 45.0%
! GCTACTGATTAAGTCTTGGC+GGG - chr5_3:62051957-62051976 None:intergenic 45.0%
CACTTTCATTATCCGGCTCT+TGG + chr5_3:62052084-62052103 Msa0823380:CDS 45.0%
AGAACAGCTGCACATATAGC+TGG - chr5_3:62052118-62052137 None:intergenic 45.0%
TGTAGGCTGCATGGAAAAAG+AGG - chr5_3:62052215-62052234 None:intergenic 45.0%
! TTTTCCATGCAGCCTACAGA+AGG + chr5_3:62052217-62052236 Msa0823380:intron 45.0%
! TTTTCCTTCTGTAGGCTGCA+TGG - chr5_3:62052224-62052243 None:intergenic 45.0%
GAAGGAAAAATTAGGGTGGG+AGG + chr5_3:62052235-62052254 Msa0823380:intron 45.0%
! AGACATACAAACAGGCGTTG+AGG + chr5_3:62052337-62052356 Msa0823380:intron 45.0%
!! GACATACAAACAGGCGTTGA+GGG + chr5_3:62052338-62052357 Msa0823380:intron 45.0%
!! CAACTGTCGGATTAGTCTAG+AGG + chr5_3:62052391-62052410 Msa0823380:intron 45.0%
!! ACTGTCGGATTAGTCTAGAG+GGG + chr5_3:62052393-62052412 Msa0823380:intron 45.0%
GATAGCTAAAGGCAAGCTCT+TGG + chr5_3:62052547-62052566 Msa0823380:CDS 45.0%
TCTTGGGAGAGACTCTAACA+TGG + chr5_3:62052564-62052583 Msa0823380:CDS 45.0%
CTTGGGAGAGACTCTAACAT+GGG + chr5_3:62052565-62052584 Msa0823380:CDS 45.0%
! AGGTTTTCTCCCATCTTTGG+TGG + chr5_3:62052641-62052660 Msa0823380:CDS 45.0%
TCATTTACCTGCCACCCTTT+GGG - chr5_3:62052713-62052732 None:intergenic 45.0%
TTCATTTACCTGCCACCCTT+TGG - chr5_3:62052714-62052733 None:intergenic 45.0%
GGATCAAACTGTGAAGGTTC+TGG - chr5_3:62052852-62052871 None:intergenic 45.0%
TGGAACAAAGCAATAGGGTG+GGG - chr5_3:62052901-62052920 None:intergenic 45.0%
! TGCTTTGTTCCATTTGGAGG+GGG + chr5_3:62052909-62052928 Msa0823380:CDS 45.0%
! GTCCAGGATATGAGTTTGCT+AGG + chr5_3:62052943-62052962 Msa0823380:CDS 45.0%
ACCCTAGCAAACTCATATCC+TGG - chr5_3:62052948-62052967 None:intergenic 45.0%
! GTTTGCTAGGGTTGAAACTC+TGG + chr5_3:62052956-62052975 Msa0823380:CDS 45.0%
TCAATCAGTAGGCCTTGACT+TGG - chr5_3:62053062-62053081 None:intergenic 45.0%
GAATTCCAAGTGAACCTGGA+GGG - chr5_3:62050801-62050820 None:intergenic 45.0%
ATGGGAATTCCAAGTGAACC+TGG - chr5_3:62050805-62050824 None:intergenic 45.0%
!! GTCTTCCACCCATTTTTCTG+CGG - chr5_3:62050872-62050891 None:intergenic 45.0%
! AAGACTCTGGCTTCAAGAAC+GGG - chr5_3:62051107-62051126 None:intergenic 45.0%
GAGGCACATTCAGATGCATT+GGG + chr5_3:62051164-62051183 Msa0823380:CDS 45.0%
CACATTCAGATGCATTGGGA+AGG + chr5_3:62051168-62051187 Msa0823380:CDS 45.0%
ATCGGATCCTCTCCAGTTAA+TGG + chr5_3:62051281-62051300 Msa0823380:intron 45.0%
ACTAGTACAGATATGGGCAG+GGG + chr5_3:62051335-62051354 Msa0823380:intron 45.0%
CTGCGGTTGTAGTGTGTAAA+GGG - chr5_3:62051803-62051822 None:intergenic 45.0%
TTTGGATCCTTGCACTCTTC+TGG - chr5_3:62051874-62051893 None:intergenic 45.0%
GATTAAGTCTTGGCGGGAAT+TGG - chr5_3:62051951-62051970 None:intergenic 45.0%
! GCTACTGATTAAGTCTTGGC+GGG - chr5_3:62051957-62051976 None:intergenic 45.0%
CACTTTCATTATCCGGCTCT+TGG + chr5_3:62052084-62052103 Msa0823380:CDS 45.0%
AGAACAGCTGCACATATAGC+TGG - chr5_3:62052118-62052137 None:intergenic 45.0%
TGTAGGCTGCATGGAAAAAG+AGG - chr5_3:62052215-62052234 None:intergenic 45.0%
! TTTTCCATGCAGCCTACAGA+AGG + chr5_3:62052217-62052236 Msa0823380:intron 45.0%
! TTTTCCTTCTGTAGGCTGCA+TGG - chr5_3:62052224-62052243 None:intergenic 45.0%
GAAGGAAAAATTAGGGTGGG+AGG + chr5_3:62052235-62052254 Msa0823380:intron 45.0%
! AGACATACAAACAGGCGTTG+AGG + chr5_3:62052337-62052356 Msa0823380:intron 45.0%
!! GACATACAAACAGGCGTTGA+GGG + chr5_3:62052338-62052357 Msa0823380:intron 45.0%
!! CAACTGTCGGATTAGTCTAG+AGG + chr5_3:62052391-62052410 Msa0823380:intron 45.0%
!! ACTGTCGGATTAGTCTAGAG+GGG + chr5_3:62052393-62052412 Msa0823380:intron 45.0%
GATAGCTAAAGGCAAGCTCT+TGG + chr5_3:62052547-62052566 Msa0823380:CDS 45.0%
TCTTGGGAGAGACTCTAACA+TGG + chr5_3:62052564-62052583 Msa0823380:CDS 45.0%
CTTGGGAGAGACTCTAACAT+GGG + chr5_3:62052565-62052584 Msa0823380:CDS 45.0%
! AGGTTTTCTCCCATCTTTGG+TGG + chr5_3:62052641-62052660 Msa0823380:CDS 45.0%
TCATTTACCTGCCACCCTTT+GGG - chr5_3:62052713-62052732 None:intergenic 45.0%
TTCATTTACCTGCCACCCTT+TGG - chr5_3:62052714-62052733 None:intergenic 45.0%
GGATCAAACTGTGAAGGTTC+TGG - chr5_3:62052852-62052871 None:intergenic 45.0%
TGGAACAAAGCAATAGGGTG+GGG - chr5_3:62052901-62052920 None:intergenic 45.0%
! TGCTTTGTTCCATTTGGAGG+GGG + chr5_3:62052909-62052928 Msa0823380:CDS 45.0%
! GTCCAGGATATGAGTTTGCT+AGG + chr5_3:62052943-62052962 Msa0823380:CDS 45.0%
ACCCTAGCAAACTCATATCC+TGG - chr5_3:62052948-62052967 None:intergenic 45.0%
! GTTTGCTAGGGTTGAAACTC+TGG + chr5_3:62052956-62052975 Msa0823380:CDS 45.0%
TCAATCAGTAGGCCTTGACT+TGG - chr5_3:62053062-62053081 None:intergenic 45.0%
!! ATTAAAATAAAATTAAAACT+TGG - chr5_3:62052433-62052452 None:intergenic 5.0%
!! ATTAAAATAAAATTAAAACT+TGG - chr5_3:62052433-62052452 None:intergenic 5.0%
! AGGGACCCTTTTGGATGGTT+TGG - chr5_3:62050782-62050801 None:intergenic 50.0%
GGAATTCCAAGTGAACCTGG+AGG - chr5_3:62050802-62050821 None:intergenic 50.0%
CGCCAACACCGCAGAAAAAT+GGG + chr5_3:62050861-62050880 Msa0823380:CDS 50.0%
!! CACCCATTTTTCTGCGGTGT+TGG - chr5_3:62050866-62050885 None:intergenic 50.0%
CAACACCGCAGAAAAATGGG+TGG + chr5_3:62050864-62050883 Msa0823380:CDS 50.0%
! GGAGGCACATTCAGATGCAT+TGG + chr5_3:62051163-62051182 Msa0823380:CDS 50.0%
!! CTACTGTTTGGTCTTGAGCG+TGG + chr5_3:62051704-62051723 Msa0823380:CDS 50.0%
GCTGCGGTTGTAGTGTGTAA+AGG - chr5_3:62051804-62051823 None:intergenic 50.0%
! TTGTGCACCAGAAGAGTGCA+AGG + chr5_3:62051864-62051883 Msa0823380:CDS 50.0%
GCTATGCTTGTCATGGTTGC+AGG + chr5_3:62052037-62052056 Msa0823380:CDS 50.0%
CTGGTTCATTAGCCAAGAGC+CGG - chr5_3:62052099-62052118 None:intergenic 50.0%
TAAAGGAGGCTGTATTGCGG+AGG + chr5_3:62052299-62052318 Msa0823380:intron 50.0%
CATTATACCCAAAGGGTGGC+AGG + chr5_3:62052703-62052722 Msa0823380:CDS 50.0%
ATTCTTGCTCCCCCTCCAAA+TGG - chr5_3:62052921-62052940 None:intergenic 50.0%
TGCTAGGGTTGAAACTCTGG+TGG + chr5_3:62052959-62052978 Msa0823380:CDS 50.0%
!! CCTTGACTTGGTGTTGGCAT+TGG - chr5_3:62053050-62053069 None:intergenic 50.0%
CCAATGCCAACACCAAGTCA+AGG + chr5_3:62053047-62053066 Msa0823380:CDS 50.0%
!! AGTAGGCCTTGACTTGGTGT+TGG - chr5_3:62053056-62053075 None:intergenic 50.0%
! AGGGACCCTTTTGGATGGTT+TGG - chr5_3:62050782-62050801 None:intergenic 50.0%
GGAATTCCAAGTGAACCTGG+AGG - chr5_3:62050802-62050821 None:intergenic 50.0%
CGCCAACACCGCAGAAAAAT+GGG + chr5_3:62050861-62050880 Msa0823380:CDS 50.0%
!! CACCCATTTTTCTGCGGTGT+TGG - chr5_3:62050866-62050885 None:intergenic 50.0%
CAACACCGCAGAAAAATGGG+TGG + chr5_3:62050864-62050883 Msa0823380:CDS 50.0%
! GGAGGCACATTCAGATGCAT+TGG + chr5_3:62051163-62051182 Msa0823380:CDS 50.0%
!! CTACTGTTTGGTCTTGAGCG+TGG + chr5_3:62051704-62051723 Msa0823380:CDS 50.0%
GCTGCGGTTGTAGTGTGTAA+AGG - chr5_3:62051804-62051823 None:intergenic 50.0%
! TTGTGCACCAGAAGAGTGCA+AGG + chr5_3:62051864-62051883 Msa0823380:CDS 50.0%
GCTATGCTTGTCATGGTTGC+AGG + chr5_3:62052037-62052056 Msa0823380:CDS 50.0%
CTGGTTCATTAGCCAAGAGC+CGG - chr5_3:62052099-62052118 None:intergenic 50.0%
TAAAGGAGGCTGTATTGCGG+AGG + chr5_3:62052299-62052318 Msa0823380:intron 50.0%
CATTATACCCAAAGGGTGGC+AGG + chr5_3:62052703-62052722 Msa0823380:CDS 50.0%
ATTCTTGCTCCCCCTCCAAA+TGG - chr5_3:62052921-62052940 None:intergenic 50.0%
TGCTAGGGTTGAAACTCTGG+TGG + chr5_3:62052959-62052978 Msa0823380:CDS 50.0%
!! CCTTGACTTGGTGTTGGCAT+TGG - chr5_3:62053050-62053069 None:intergenic 50.0%
CCAATGCCAACACCAAGTCA+AGG + chr5_3:62053047-62053066 Msa0823380:CDS 50.0%
!! AGTAGGCCTTGACTTGGTGT+TGG - chr5_3:62053056-62053075 None:intergenic 50.0%
! TGAACCTGGAGGGACCCTTT+TGG - chr5_3:62050791-62050810 None:intergenic 55.0%
GCGCCAACACCGCAGAAAAA+TGG + chr5_3:62050860-62050879 Msa0823380:CDS 55.0%
GGAAGGGAAACAGCAGCTCA+AGG + chr5_3:62051185-62051204 Msa0823380:CDS 55.0%
ACACTACAACCGCAGCCTCA+AGG + chr5_3:62051808-62051827 Msa0823380:CDS 55.0%
TTGCACTCTCCTTGAGGCTG+CGG - chr5_3:62051820-62051839 None:intergenic 55.0%
GGATCCTTGCACTCTCCTTG+AGG - chr5_3:62051826-62051845 None:intergenic 55.0%
GAGAGAGAGAGAGACGAGCT+AGG + chr5_3:62052187-62052206 Msa0823380:intron 55.0%
AATAGGGTGGGGTAGATGCC+AGG - chr5_3:62052890-62052909 None:intergenic 55.0%
GGGGGAGCAAGAATATGTCC+AGG + chr5_3:62052927-62052946 Msa0823380:CDS 55.0%
! TGAACCTGGAGGGACCCTTT+TGG - chr5_3:62050791-62050810 None:intergenic 55.0%
GCGCCAACACCGCAGAAAAA+TGG + chr5_3:62050860-62050879 Msa0823380:CDS 55.0%
GGAAGGGAAACAGCAGCTCA+AGG + chr5_3:62051185-62051204 Msa0823380:CDS 55.0%
ACACTACAACCGCAGCCTCA+AGG + chr5_3:62051808-62051827 Msa0823380:CDS 55.0%
TTGCACTCTCCTTGAGGCTG+CGG - chr5_3:62051820-62051839 None:intergenic 55.0%
GGATCCTTGCACTCTCCTTG+AGG - chr5_3:62051826-62051845 None:intergenic 55.0%
GAGAGAGAGAGAGACGAGCT+AGG + chr5_3:62052187-62052206 Msa0823380:intron 55.0%
AATAGGGTGGGGTAGATGCC+AGG - chr5_3:62052890-62052909 None:intergenic 55.0%
GGGGGAGCAAGAATATGTCC+AGG + chr5_3:62052927-62052946 Msa0823380:CDS 55.0%
! CCTGGAGGGACCCTTTTGGA+TGG - chr5_3:62050787-62050806 None:intergenic 60.0%
CCATCCAAAAGGGTCCCTCC+AGG + chr5_3:62050784-62050803 Msa0823380:CDS 60.0%
AGGGTCCCTCCAGGTTCACT+TGG + chr5_3:62050793-62050812 Msa0823380:CDS 60.0%
TGGCGCGCATAGCACGAAGA+AGG - chr5_3:62050846-62050865 None:intergenic 60.0%
GTACAGATATGGGCAGGGGC+CGG + chr5_3:62051339-62051358 Msa0823380:intron 60.0%
! GCAGCCTCAAGGAGAGTGCA+AGG + chr5_3:62051819-62051838 Msa0823380:CDS 60.0%
! CCTGGAGGGACCCTTTTGGA+TGG - chr5_3:62050787-62050806 None:intergenic 60.0%
CCATCCAAAAGGGTCCCTCC+AGG + chr5_3:62050784-62050803 Msa0823380:CDS 60.0%
AGGGTCCCTCCAGGTTCACT+TGG + chr5_3:62050793-62050812 Msa0823380:CDS 60.0%
TGGCGCGCATAGCACGAAGA+AGG - chr5_3:62050846-62050865 None:intergenic 60.0%
GTACAGATATGGGCAGGGGC+CGG + chr5_3:62051339-62051358 Msa0823380:intron 60.0%
! GCAGCCTCAAGGAGAGTGCA+AGG + chr5_3:62051819-62051838 Msa0823380:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 62050712 62053106 62050712 ID=Msa0823380;Name=Msa0823380
chr5_3 mRNA 62050712 62053106 62050712 ID=Msa0823380-mRNA-1;Parent=Msa0823380;Name=Msa0823380-mRNA-1;_AED=0.09;_eAED=0.10;_QI=0|0|0|1|1|1|4|0|489
chr5_3 exon 62050712 62051206 62050712 ID=Msa0823380-mRNA-1:exon:19247;Parent=Msa0823380-mRNA-1
chr5_3 exon 62051659 62052142 62051659 ID=Msa0823380-mRNA-1:exon:19248;Parent=Msa0823380-mRNA-1
chr5_3 exon 62052537 62052724 62052537 ID=Msa0823380-mRNA-1:exon:19249;Parent=Msa0823380-mRNA-1
chr5_3 exon 62052804 62053106 62052804 ID=Msa0823380-mRNA-1:exon:19250;Parent=Msa0823380-mRNA-1
chr5_3 CDS 62050712 62051206 62050712 ID=Msa0823380-mRNA-1:cds;Parent=Msa0823380-mRNA-1
chr5_3 CDS 62051659 62052142 62051659 ID=Msa0823380-mRNA-1:cds;Parent=Msa0823380-mRNA-1
chr5_3 CDS 62052537 62052724 62052537 ID=Msa0823380-mRNA-1:cds;Parent=Msa0823380-mRNA-1
chr5_3 CDS 62052804 62053106 62052804 ID=Msa0823380-mRNA-1:cds;Parent=Msa0823380-mRNA-1
Gene Sequence

>Msa0823380

ATGATGGCTAGTGTTCTTCTTGTTGCTCTCCTCTTACTCATTCCAGTTCTCTTTCTGCTAAAAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGTCTTGGCCTTCTTCGTGCTATGCGCGCCAACACCGCAGAAAAATGGGTGGAAGACAGAATCAACAAGTATGGTCCTATTTCAAAGCTGAGTTTATTTGGAACACCAACTGTTTTGATTCATGGACAGGCTGCGAATAAGTTTATATTCACCAATCGCGATGAGAATATTGTTAACCAGCAAACACAGTCAATTAAGATGATATTAGGCGACAGGAACTTGCTTGAACTGAGTAGCAAAGATCATAGCAGAGTCAGAGGTGCACTTGTCCCGTTCTTGAAGCCAGAGTCTTTGAAGCAATATGTTGGTAAAATTGATGAAGAAGTTAGGAGGCACATTCAGATGCATTGGGAAGGGAAACAGCAGCTCAAGGTATTGCCCCTAATGAAGACTCTCACTTTCAACATAATTTGTTCTCTACTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTCATGAATCCATTTCAATCAATAATTAAGGGAATGTGGTCAGTCCCAATTAATGCACCCTTTACACACTACAACCGCAGCCTCAAGGAGAGTGCAAGGATCCAAAACATGTTAAAGGAAATTGTGCACCAGAAGAGTGCAAGGATCCAAAACATGTTAAAGGAAATTGTGCACCAGAAGAAAGTTGAATACGAGAAAAATGGCGCCAATTCCCGCCAAGACTTAATCAGTAGCTTGCTTAGTATGGTTGAAGATGGAAAACAAGTTTTAACTGAGAACGAAATTATCCATAATGCTATGCTTGTCATGGTTGCAGGACATGATACATCATCCATTCTAATCACTTTCATTATCCGGCTCTTGGCTAATGAACCAGCTATATGTGCAGCTGTTCTTAAAGAACAGGAAGAGATAGCTAAAGGCAAGCTCTTGGGAGAGACTCTAACATGGGAAGACCTTTCAAAGATGAAGTATACTTGGAGAGTAGCAATGGAAACTCTGAGAAGGTTTTCTCCCATCTTTGGTGGATTCAGAAAAACTACAACAGATATTGAATATGGTGGATACATTATACCCAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCTTCACAGTTTGATCCAAGTAGATTTGAAAACCTGGCATCTACCCCACCCTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGATATGAGTTTGCTAGGGTTGAAACTCTGGTGGCGATTCATTACCTTGTGACCAAATTCAGTTGTAAGCTACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACACCAAGTCAAGGCCTACTGATTGAACTTTGCCCAAGGAAACTATCTTAG

Protein sequence

>Msa0823380

MMASVLLVALLLLIPVLFLLKRTKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVEDRINKYGPISKLSLFGTPTVLIHGQAANKFIFTNRDENIVNQQTQSIKMILGDRNLLELSSKDHSRVRGALVPFLKPESLKQYVGKIDEEVRRHIQMHWEGKQQLKVLPLMKTLTFNIICSLLFGLERGKQRDQFMNPFQSIIKGMWSVPINAPFTHYNRSLKESARIQNMLKEIVHQKSARIQNMLKEIVHQKKVEYEKNGANSRQDLISSLLSMVEDGKQVLTENEIIHNAMLVMVAGHDTSSILITFIIRLLANEPAICAAVLKEQEEIAKGKLLGETLTWEDLSKMKYTWRVAMETLRRFSPIFGGFRKTTTDIEYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSQFDPSRFENLASTPPYCFVPFGGGARICPGYEFARVETLVAIHYLVTKFSCKLLSDNSFSRDPMPTPSQGLLIELCPRKLS*