AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0742200


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742200 MtrunA17_Chr5g0443731 95.570 474 21 0 1 474 1 474 0.0 908
Msa0742200 MtrunA17_Chr3g0107501 40.179 448 264 4 27 471 31 477 6.06e-119 357
Msa0742200 MtrunA17_Chr3g0107511 39.121 478 283 6 1 471 1 477 6.33e-116 349
Msa0742200 MtrunA17_Chr8g0388921 37.632 473 292 3 2 472 7 478 8.99e-116 348
Msa0742200 MtrunA17_Chr8g0380471 38.365 477 282 7 5 474 8 479 3.42e-112 339
Msa0742200 MtrunA17_Chr5g0443401 35.430 477 294 7 4 473 10 479 2.99e-105 322
Msa0742200 MtrunA17_Chr8g0380931 31.983 469 286 11 17 468 50 502 8.16e-79 254
Msa0742200 MtrunA17_Chr5g0403931 32.889 450 293 6 7 451 14 459 9.91e-71 232
Msa0742200 MtrunA17_Chr1g0153371 30.851 470 306 7 2 464 5 462 6.49e-69 228
Msa0742200 MtrunA17_Chr8g0369791 30.947 475 306 9 2 472 10 466 6.61e-69 227
Msa0742200 MtrunA17_Chr5g0408181 31.809 481 294 12 1 472 9 464 7.46e-68 224
Msa0742200 MtrunA17_Chr4g0044851 30.296 439 293 5 28 464 36 463 3.52e-66 220
Msa0742200 MtrunA17_Chr8g0341951 29.274 427 286 7 22 442 28 444 5.28e-63 212
Msa0742200 MtrunA17_Chr3g0113321 30.641 421 279 7 28 443 28 440 7.80e-63 212
Msa0742200 MtrunA17_Chr4g0044841 31.027 448 291 7 22 464 31 465 2.79e-60 204
Msa0742200 MtrunA17_Chr7g0226771 27.640 445 313 5 28 470 32 469 8.44e-60 203
Msa0742200 MtrunA17_Chr2g0293411 28.261 460 316 10 2 451 11 466 1.84e-58 200
Msa0742200 MtrunA17_Chr5g0397971 25.664 452 329 4 7 456 9 455 2.93e-56 194
Msa0742200 MtrunA17_Chr8g0372411 26.202 416 299 4 30 442 40 450 2.22e-55 191
Msa0742200 MtrunA17_Chr7g0219961 28.315 445 301 8 27 468 31 460 1.10e-54 189
Msa0742200 MtrunA17_Chr5g0400421 25.383 457 332 8 18 468 34 487 6.19e-54 188
Msa0742200 MtrunA17_Chr3g0078411 26.923 468 322 8 2 464 5 457 1.86e-53 186
Msa0742200 MtrunA17_Chr8g0381541 26.174 447 320 8 29 468 43 486 9.58e-53 185
Msa0742200 MtrunA17_Chr8g0381571 26.905 420 298 7 29 442 43 459 1.24e-52 184
Msa0742200 MtrunA17_Chr1g0164371 28.785 469 315 10 5 468 19 473 1.65e-52 184
Msa0742200 MtrunA17_Chr6g0455461 26.709 468 323 8 2 464 5 457 4.43e-52 182
Msa0742200 MtrunA17_Chr8g0373441 29.327 416 287 5 2 414 6 417 6.74e-52 181
Msa0742200 MtrunA17_Chr3g0141801 28.726 463 314 7 6 459 16 471 2.18e-51 181
Msa0742200 MtrunA17_Chr2g0293421 25.822 426 304 7 29 448 45 464 4.14e-51 180
Msa0742200 MtrunA17_Chr5g0400411 26.535 456 327 7 18 468 34 486 2.22e-50 178
Msa0742200 MtrunA17_Chr6g0478161 24.635 479 343 5 1 471 22 490 1.46e-48 174
Msa0742200 MtrunA17_Chr3g0089361 25.486 463 324 13 13 468 26 474 8.12e-48 171
Msa0742200 MtrunA17_Chr8g0372711 26.562 448 314 7 6 446 19 458 2.28e-47 170
Msa0742200 MtrunA17_Chr8g0339861 26.667 420 294 10 29 442 45 456 4.39e-46 167
Msa0742200 MtrunA17_Chr3g0089351 26.371 383 270 8 70 451 3 374 1.81e-44 160
Msa0742200 MtrunA17_Chr6g0458561 25.625 480 313 16 7 449 28 500 2.31e-28 117
Msa0742200 MtrunA17_Chr1g0160851 24.094 469 317 12 5 446 9 465 2.19e-26 111
Msa0742200 MtrunA17_Chr5g0395321 25.455 495 323 15 4 469 11 488 1.61e-25 109
Msa0742200 MtrunA17_Chr5g0404861 38.710 124 75 1 327 449 15 138 3.62e-25 101
Msa0742200 MtrunA17_Chr8g0354531 25.547 411 269 11 62 446 219 618 2.01e-24 106
Msa0742200 MtrunA17_Chr3g0116741 23.108 489 333 12 7 466 29 503 6.67e-24 104
Msa0742200 MtrunA17_Chr2g0313821 25.121 414 269 14 62 446 88 489 1.06e-23 103
Msa0742200 MtrunA17_Chr1g0205361 23.918 485 298 16 5 446 9 465 2.37e-23 102
Msa0742200 MtrunA17_Chr5g0395331 24.138 493 302 14 22 469 30 495 2.69e-23 102
Msa0742200 MtrunA17_Chr5g0395381 25.773 485 309 16 4 469 11 463 4.08e-23 102
Msa0742200 MtrunA17_Chr5g0405001 24.000 475 316 13 6 446 18 481 1.15e-22 100
Msa0742200 MtrunA17_Chr7g0215181 26.873 387 256 15 102 470 131 508 1.25e-22 100
Msa0742200 MtrunA17_Chr4g0004601 24.490 441 291 15 55 468 103 528 2.14e-22 100
Msa0742200 MtrunA17_Chr8g0339331 26.526 426 266 14 63 449 70 487 5.31e-22 99.0
Msa0742200 MtrunA17_Chr8g0381561 34.545 110 71 1 333 442 2 110 5.93e-22 91.3
Msa0742200 MtrunA17_Chr6g0463551 29.570 186 119 3 188 366 9 189 5.94e-22 93.6
Msa0742200 MtrunA17_Chr3g0135841 27.974 311 187 10 149 449 227 510 7.03e-22 98.6
Msa0742200 MtrunA17_Chr4g0058191 24.788 472 310 17 6 446 1 458 8.01e-22 98.2
Msa0742200 MtrunA17_Chr1g0205371 23.313 489 307 15 4 449 6 469 1.36e-21 97.4
Msa0742200 MtrunA17_Chr5g0401691 24.516 465 300 13 10 445 35 477 1.86e-21 97.1
Msa0742200 MtrunA17_Chr0c19g0493771 27.734 256 163 7 205 446 373 620 2.09e-21 97.4
Msa0742200 MtrunA17_Chr6g0457421 27.249 389 254 16 101 470 128 506 5.87e-21 95.5
Msa0742200 MtrunA17_Chr6g0451691 23.819 508 295 21 1 442 8 489 6.25e-21 95.5
Msa0742200 MtrunA17_Chr5g0437001 42.593 108 60 1 334 439 1 108 6.54e-21 89.4
Msa0742200 MtrunA17_Chr8g0381551 23.759 282 208 5 29 305 43 322 1.88e-20 92.4
Msa0742200 MtrunA17_Chr2g0307291 24.812 399 265 13 74 446 102 491 1.93e-20 94.0
Msa0742200 MtrunA17_Chr8g0355961 23.718 468 323 13 5 446 15 474 2.00e-20 94.0
Msa0742200 MtrunA17_Chr2g0313811 26.837 313 193 12 159 446 200 501 3.11e-20 93.6
Msa0742200 MtrunA17_Chr8g0362731 27.424 361 229 12 127 467 49 396 3.82e-20 92.4
Msa0742200 MtrunA17_Chr4g0058201 25.223 448 296 17 26 446 25 460 4.39e-20 92.8
Msa0742200 MtrunA17_Chr1g0161671 23.490 298 222 5 12 305 12 307 4.56e-20 90.9
Msa0742200 MtrunA17_Chr4g0047661 22.574 505 337 17 5 472 20 507 4.96e-20 92.8
Msa0742200 MtrunA17_Chr8g0354571 25.243 412 278 10 58 446 93 497 5.01e-20 92.8
Msa0742200 MtrunA17_Chr1g0160861 26.724 232 162 4 219 446 79 306 5.77e-20 90.9
Msa0742200 MtrunA17_Chr2g0307301 26.359 368 232 12 108 446 134 491 6.25e-20 92.4
Msa0742200 MtrunA17_Chr8g0356001 30.901 233 153 5 219 446 245 474 9.18e-20 92.0
Msa0742200 MtrunA17_Chr4g0039901 30.263 228 148 6 224 445 244 466 9.31e-20 92.0
Msa0742200 MtrunA17_Chr4g0000151 34.862 109 69 2 334 442 6 112 1.03e-19 85.5
Msa0742200 MtrunA17_Chr8g0334891 22.500 440 312 12 24 448 33 458 1.32e-19 91.3
Msa0742200 MtrunA17_Chr4g0035921 23.299 485 317 13 3 446 11 481 1.45e-19 91.3
Msa0742200 MtrunA17_Chr8g0354511 25.416 421 266 12 58 446 93 497 2.39e-19 90.9
Msa0742200 MtrunA17_Chr2g0313791 26.518 313 194 12 159 446 183 484 4.91e-19 89.7
Msa0742200 MtrunA17_Chr7g0218601 25.054 459 288 18 16 434 15 457 5.82e-19 89.4
Msa0742200 MtrunA17_Chr6g0466941 24.587 484 307 22 2 438 8 480 7.80e-19 89.4
Msa0742200 MtrunA17_Chr8g0372251 23.832 428 283 13 30 425 36 452 8.12e-19 89.0
Msa0742200 MtrunA17_Chr2g0280081 23.349 424 272 13 64 446 564 975 8.30e-19 89.7
Msa0742200 MtrunA17_Chr2g0280081 28.571 217 142 5 241 446 260 474 2.68e-17 85.1
Msa0742200 MtrunA17_Chr4g0053621 22.965 479 316 16 6 449 8 468 8.78e-19 89.0
Msa0742200 MtrunA17_Chr5g0401681 24.628 471 317 17 4 449 7 464 1.14e-18 88.6
Msa0742200 MtrunA17_Chr2g0313801 25.879 313 196 11 159 446 188 489 1.19e-18 88.6
Msa0742200 MtrunA17_Chr2g0280071 23.125 480 320 13 5 446 39 507 1.30e-18 89.0
Msa0742200 MtrunA17_Chr6g0451641 25.309 486 300 21 4 442 9 478 1.49e-18 88.2
Msa0742200 MtrunA17_Chr4g0057001 22.444 450 310 12 22 443 43 481 1.58e-18 88.2
Msa0742200 MtrunA17_Chr1g0174481 24.033 491 321 16 5 459 9 483 1.84e-18 87.8
Msa0742200 MtrunA17_Chr6g0463541 40.000 90 52 1 362 451 2 89 1.94e-18 80.9
Msa0742200 MtrunA17_Chr2g0313751 24.516 310 204 8 159 446 215 516 2.24e-18 87.8
Msa0742200 MtrunA17_Chr8g0382901 24.459 462 313 15 2 446 1 443 2.36e-18 88.6
Msa0742200 MtrunA17_Chr2g0310391 22.410 473 329 14 5 449 2 464 2.76e-18 87.4
Msa0742200 MtrunA17_Chr8g0364651 21.605 486 321 16 1 445 1 467 3.16e-18 87.0
Msa0742200 MtrunA17_Chr2g0288661 23.871 310 206 8 159 446 190 491 3.21e-18 87.4
Msa0742200 MtrunA17_Chr4g0011871 25.743 505 324 19 2 469 1 491 4.24e-18 86.7
Msa0742200 MtrunA17_Chr5g0419691 25.992 504 323 18 2 469 1 490 4.34e-18 86.7
Msa0742200 MtrunA17_Chr5g0403321 23.451 452 303 16 28 446 33 474 4.41e-18 86.7
Msa0742200 MtrunA17_Chr2g0313771 23.899 318 219 9 147 446 184 496 4.59e-18 86.7
Msa0742200 MtrunA17_Chr7g0235261 24.054 370 246 12 124 468 148 507 4.87e-18 86.7
Msa0742200 MtrunA17_Chr7g0265611 22.360 483 296 17 16 446 30 485 5.99e-18 86.3
Msa0742200 MtrunA17_Chr4g0047691 22.410 473 323 15 27 472 50 505 6.36e-18 86.3
Msa0742200 MtrunA17_Chr2g0314731 30.049 203 133 4 249 446 267 465 7.82e-18 85.9
Msa0742200 MtrunA17_Chr2g0313761 24.920 313 203 11 159 448 183 486 8.66e-18 85.9
Msa0742200 MtrunA17_Chr2g0313831 25.899 417 262 15 62 446 88 489 8.79e-18 85.9
Msa0742200 MtrunA17_Chr4g0011961 22.785 474 327 15 1 446 1 463 8.96e-18 85.9
Msa0742200 MtrunA17_Chr6g0466901 22.013 477 301 16 4 427 9 467 1.18e-17 85.5
Msa0742200 MtrunA17_Chr5g0404881 23.077 221 163 2 8 222 9 228 1.25e-17 82.0
Msa0742200 MtrunA17_Chr2g0313781 25.797 345 215 14 132 446 168 501 1.39e-17 85.5
Msa0742200 MtrunA17_Chr5g0446161 23.899 477 316 15 4 448 9 470 1.55e-17 85.1
Msa0742200 MtrunA17_Chr3g0128461 26.246 301 202 7 160 446 203 497 1.62e-17 85.1
Msa0742200 MtrunA17_Chr2g0280121 24.390 451 292 13 35 446 40 480 2.41e-17 84.7
Msa0742200 MtrunA17_Chr1g0197891 23.125 480 279 16 18 446 23 463 3.10e-17 84.0
Msa0742200 MtrunA17_Chr8g0364081 25.902 305 190 11 170 443 212 511 3.50e-17 84.3
Msa0742200 MtrunA17_Chr4g0039391 29.508 244 156 9 241 473 263 501 5.72e-17 83.6
Msa0742200 MtrunA17_Chr4g0047631 22.222 468 322 14 6 446 28 480 6.44e-17 83.2
Msa0742200 MtrunA17_Chr5g0446131 23.823 361 236 14 115 446 137 487 7.36e-17 83.2
Msa0742200 MtrunA17_Chr1g0151221 29.310 174 101 5 281 442 332 495 7.97e-17 83.2
Msa0742200 MtrunA17_Chr4g0000171 21.656 314 230 7 1 303 8 316 8.60e-17 81.6
Msa0742200 MtrunA17_Chr2g0286091 23.434 431 285 13 27 427 38 453 8.78e-17 82.8
Msa0742200 MtrunA17_Chr6g0451741 23.800 500 290 22 8 442 34 507 1.14e-16 82.4
Msa0742200 MtrunA17_Chr1g0176831 30.000 210 133 5 242 446 295 495 1.50e-16 82.0
Msa0742200 MtrunA17_Chr1g0197871 26.724 232 156 5 225 449 242 466 1.62e-16 82.0
Msa0742200 MtrunA17_Chr5g0431501 22.814 469 320 13 29 467 33 489 1.70e-16 82.0
Msa0742200 MtrunA17_Chr5g0431461 22.814 469 320 13 29 467 33 489 1.70e-16 82.0
Msa0742200 MtrunA17_Chr4g0020041 24.411 467 289 19 20 446 28 470 1.71e-16 82.0
Msa0742200 MtrunA17_Chr4g0056951 29.075 227 147 6 226 443 255 476 2.46e-16 81.3
Msa0742200 MtrunA17_Chr4g0063221 24.804 383 253 13 90 446 119 492 2.48e-16 81.6
Msa0742200 MtrunA17_Chr8g0361471 22.961 466 297 16 21 446 26 469 3.00e-16 81.3
Msa0742200 MtrunA17_Chr1g0164211 23.144 458 309 16 18 448 23 464 3.53e-16 80.9
Msa0742200 MtrunA17_Chr8g0336361 24.688 401 227 16 127 467 161 546 3.84e-16 80.9
Msa0742200 MtrunA17_Chr7g0255531 22.757 457 310 17 2 427 1 445 3.87e-16 80.9
Msa0742200 MtrunA17_Chr1g0197881 22.828 495 292 16 3 446 7 462 4.14e-16 80.5
Msa0742200 MtrunA17_Chr1g0197851 28.780 205 132 5 249 446 266 463 5.04e-16 80.5
Msa0742200 MtrunA17_Chr3g0116681 24.843 479 305 22 1 446 15 471 7.10e-16 80.1
Msa0742200 MtrunA17_Chr5g0396521 25.080 311 180 10 177 446 244 542 1.10e-15 79.7
Msa0742200 MtrunA17_Chr1g0203141 24.571 350 239 12 115 446 146 488 1.11e-15 79.3
Msa0742200 MtrunA17_Chr7g0246221 23.629 474 326 12 1 446 6 471 1.23e-15 79.3
Msa0742200 MtrunA17_Chr4g0011881 23.732 493 319 18 16 469 16 490 1.28e-15 79.3
Msa0742200 MtrunA17_Chr1g0193811 24.009 429 293 13 71 473 97 518 1.36e-15 79.3
Msa0742200 MtrunA17_Chr4g0013471 19.091 330 251 6 1 319 8 332 1.45e-15 78.6
Msa0742200 MtrunA17_Chr4g0058211 31.579 171 110 3 280 446 19 186 1.83e-15 75.5
Msa0742200 MtrunA17_Chr3g0101631 24.580 476 309 20 2 446 8 464 2.20e-15 78.6
Msa0742200 MtrunA17_Chr5g0436981 30.400 125 86 1 28 151 27 151 2.24e-15 74.7
Msa0742200 MtrunA17_Chr8g0351801 27.059 255 162 5 227 461 251 501 2.54e-15 78.2
Msa0742200 MtrunA17_Chr2g0280011 28.161 174 113 4 283 446 11 182 2.68e-15 74.7
Msa0742200 MtrunA17_Chr1g0179811 25.194 258 176 7 227 471 286 539 3.64e-15 77.8
Msa0742200 MtrunA17_Chr1g0203151 24.069 349 242 11 115 446 142 484 4.94e-15 77.4
Msa0742200 MtrunA17_Chr3g0101831 23.629 474 319 16 4 448 13 472 5.59e-15 77.0
Msa0742200 MtrunA17_Chr2g0314721 27.727 220 150 4 243 457 272 487 6.66e-15 77.0
Msa0742200 MtrunA17_Chr7g0260831 22.462 463 303 17 23 444 24 471 8.33e-15 76.6
Msa0742200 MtrunA17_Chr7g0218611 24.719 445 283 18 26 434 30 458 8.65e-15 76.6
Msa0742200 MtrunA17_Chr3g0082701 25.877 228 151 8 214 427 252 475 9.64e-15 76.6
Msa0742200 MtrunA17_Chr3g0101691 22.245 481 316 16 4 446 13 473 1.08e-14 76.3
Msa0742200 MtrunA17_Chr4g0024771 21.748 469 327 17 6 446 12 468 1.70e-14 75.5
Msa0742200 MtrunA17_Chr8g0390881 22.521 484 318 19 5 449 10 475 2.00e-14 75.5
Msa0742200 MtrunA17_Chr8g0334941 25.088 283 186 9 182 448 31 303 2.44e-14 73.9
Msa0742200 MtrunA17_Chr3g0089381 26.667 195 137 4 173 366 3 192 2.91e-14 72.0
Msa0742200 MtrunA17_Chr4g0052861 22.601 469 326 15 4 449 10 464 3.23e-14 74.7
Msa0742200 MtrunA17_Chr6g0451781 22.075 453 278 16 26 423 71 503 4.00e-14 74.7
Msa0742200 MtrunA17_Chr5g0406651 23.991 446 289 16 16 427 17 446 4.14e-14 74.3
Msa0742200 MtrunA17_Chr2g0308651 23.684 380 255 12 99 446 12 388 4.15e-14 73.9
Msa0742200 MtrunA17_Chr6g0484811 23.014 491 320 22 5 457 12 482 4.20e-14 74.3
Msa0742200 MtrunA17_Chr2g0304871 23.651 482 306 19 7 442 15 480 4.84e-14 74.3
Msa0742200 MtrunA17_Chr3g0119681 22.599 354 224 13 138 448 146 492 6.85e-14 73.9
Msa0742200 MtrunA17_Chr2g0280061 27.907 172 116 3 283 446 11 182 7.53e-14 70.5
Msa0742200 MtrunA17_Chr4g0076161 23.094 446 306 15 28 446 36 471 8.90e-14 73.6
Msa0742200 MtrunA17_Chr3g0089291 22.553 235 171 6 73 305 6 231 9.58e-14 70.9
Msa0742200 MtrunA17_Chr6g0479681 22.740 365 243 12 115 446 144 502 1.34e-13 72.8
Msa0742200 MtrunA17_Chr4g0011851 30.286 175 107 5 280 446 16 183 1.54e-13 69.7
Msa0742200 MtrunA17_Chr2g0314781 33.333 144 90 3 308 446 10 152 1.70e-13 68.6
Msa0742200 MtrunA17_Chr1g0162811 26.293 232 154 5 226 446 243 468 2.93e-13 71.6
Msa0742200 MtrunA17_Chr3g0101671 22.366 465 301 16 21 446 30 473 3.08e-13 71.6
Msa0742200 MtrunA17_Chr7g0248991 25.604 207 133 7 205 400 155 351 3.11e-13 71.2
Msa0742200 MtrunA17_Chr2g0334021 35.152 165 98 5 314 471 336 498 3.30e-13 71.6
Msa0742200 MtrunA17_Chr7g0260821 21.382 463 307 17 24 444 25 472 3.35e-13 71.6
Msa0742200 MtrunA17_Chr1g0162801 23.347 484 308 18 5 446 9 471 6.44e-13 70.9
Msa0742200 MtrunA17_Chr5g0445451 20.763 472 330 20 5 446 11 468 6.46e-13 70.9
Msa0742200 MtrunA17_Chr8g0354541 31.967 122 79 2 329 446 30 151 6.56e-13 67.0
Msa0742200 MtrunA17_Chr4g0052881 23.750 240 169 6 214 450 238 466 7.07e-13 70.5
Msa0742200 MtrunA17_Chr6g0451811 28.235 170 107 5 280 442 5 166 7.78e-13 67.8
Msa0742200 MtrunA17_Chr5g0413911 25.366 205 140 3 259 457 313 510 9.29e-13 70.5
Msa0742200 MtrunA17_Chr8g0387101 27.320 194 128 5 265 447 286 477 1.04e-12 70.1
Msa0742200 MtrunA17_Chr4g0011921 22.432 477 326 16 1 446 1 464 1.51e-12 69.7
Msa0742200 MtrunA17_Chr6g0463561 27.673 159 111 3 7 162 14 171 1.56e-12 66.2
Msa0742200 MtrunA17_Chr5g0431511 21.810 431 293 14 29 427 33 451 2.17e-12 68.9
Msa0742200 MtrunA17_Chr6g0463801 21.674 466 310 12 19 451 27 470 2.52e-12 68.9
Msa0742200 MtrunA17_Chr4g0000161 20.072 279 214 5 29 303 43 316 3.13e-12 67.8
Msa0742200 MtrunA17_Chr4g0017411 25.105 239 164 6 233 467 240 467 3.53e-12 68.6
Msa0742200 MtrunA17_Chr1g0163421 22.785 395 241 12 90 447 147 514 4.73e-12 68.2
Msa0742200 MtrunA17_Chr3g0101731 23.077 455 309 15 20 446 28 469 4.89e-12 68.2
Msa0742200 MtrunA17_Chr4g0046681 27.097 155 102 4 280 427 31 181 5.16e-12 65.9
Msa0742200 MtrunA17_Chr1g0163451 22.785 395 241 12 90 447 131 498 7.08e-12 67.4
Msa0742200 MtrunA17_Chr4g0046331 22.912 467 299 17 8 427 5 457 7.11e-12 67.4
Msa0742200 MtrunA17_Chr4g0011901 23.261 460 307 17 19 446 19 464 8.00e-12 67.4
Msa0742200 MtrunA17_Chr5g0445421 20.479 459 326 13 5 446 85 521 8.03e-12 67.4
Msa0742200 MtrunA17_Chr8g0362481 26.638 229 152 6 211 427 163 387 8.29e-12 67.0
Msa0742200 MtrunA17_Chr5g0431671 21.719 442 312 16 29 446 38 469 1.15e-11 66.6
Msa0742200 MtrunA17_Chr1g0174431 27.461 193 125 3 280 461 1 189 1.45e-11 63.9
Msa0742200 MtrunA17_Chr2g0280041 28.125 192 126 5 265 446 317 506 1.47e-11 66.6
Msa0742200 MtrunA17_Chr4g0046321 22.475 396 269 14 64 427 66 455 1.54e-11 66.6
Msa0742200 MtrunA17_Chr6g0449361 23.874 222 161 5 235 448 257 478 1.56e-11 66.2
Msa0742200 MtrunA17_Chr8g0387001 24.430 307 185 10 159 430 168 462 3.06e-11 65.5
Msa0742200 MtrunA17_Chr3g0101661 21.355 487 312 20 4 446 13 472 3.07e-11 65.5
Msa0742200 MtrunA17_Chr5g0445381 21.245 466 330 13 6 446 46 499 3.68e-11 65.5
Msa0742200 MtrunA17_Chr2g0321171 25.316 237 161 7 219 450 249 474 5.67e-11 64.7
Msa0742200 MtrunA17_Chr1g0161661 33.803 71 46 1 378 448 7 76 6.65e-11 58.9
Msa0742200 MtrunA17_Chr4g0011981 23.077 455 298 19 27 446 27 464 8.56e-11 63.9
Msa0742200 MtrunA17_Chr6g0449331 25.792 221 150 6 243 450 273 492 9.94e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0742200 AT5G36110.1 37.333 450 268 6 29 471 34 476 6.21e-106 323
Msa0742200 AT2G42850.1 34.989 443 280 5 31 471 47 483 5.40e-95 296
Msa0742200 AT5G45340.1 30.638 470 304 9 1 468 10 459 4.93e-71 233
Msa0742200 AT5G36110.2 35.511 352 216 4 29 375 34 379 5.30e-71 230
Msa0742200 AT5G45340.2 31.347 453 289 9 1 451 10 442 2.34e-70 231
Msa0742200 AT4G19230.1 31.448 442 285 8 29 469 36 460 1.21e-69 229
Msa0742200 AT4G19230.2 31.884 414 265 7 29 442 36 432 4.03e-67 223
Msa0742200 AT2G32440.2 28.868 433 300 6 17 445 32 460 4.42e-66 221
Msa0742200 AT2G32440.1 28.868 433 300 6 17 445 32 460 4.42e-66 221
Msa0742200 AT3G13730.2 30.569 422 278 8 28 442 50 463 2.95e-65 218
Msa0742200 AT3G13730.1 30.569 422 278 8 28 442 50 463 7.06e-65 218
Msa0742200 AT2G42850.2 33.237 346 226 3 31 375 47 388 7.02e-64 212
Msa0742200 AT5G05690.1 31.579 418 275 7 29 443 31 440 1.03e-63 214
Msa0742200 AT4G36380.1 29.138 429 298 4 29 453 69 495 1.69e-63 214
Msa0742200 AT2G29090.2 29.241 448 298 8 28 470 48 481 6.27e-63 212
Msa0742200 AT2G29090.1 29.241 448 298 8 28 470 48 481 6.27e-63 212
Msa0742200 AT1G05160.2 28.029 421 297 5 29 445 45 463 2.77e-62 211
Msa0742200 AT1G05160.1 28.029 421 297 5 29 445 45 463 2.77e-62 211
Msa0742200 AT3G19270.2 27.332 461 321 7 6 464 11 459 1.46e-59 203
Msa0742200 AT3G50660.1 30.197 457 280 8 29 450 39 491 2.59e-58 201
Msa0742200 AT3G19270.1 27.626 438 304 6 6 442 11 436 9.39e-58 197
Msa0742200 AT3G30180.1 27.637 474 325 8 1 470 5 464 1.47e-57 197
Msa0742200 AT1G19630.1 27.840 449 316 6 5 450 9 452 3.98e-57 196
Msa0742200 AT1G19630.3 28.345 441 308 6 5 442 9 444 4.63e-57 196
Msa0742200 AT1G12740.1 23.696 460 341 5 2 456 1 455 3.19e-56 194
Msa0742200 AT5G36140.1 32.781 302 192 5 15 311 16 311 2.64e-55 187
Msa0742200 AT1G12740.4 23.391 466 341 6 2 456 1 461 1.08e-53 187
Msa0742200 AT1G12740.2 23.176 466 342 6 2 456 1 461 2.82e-53 186
Msa0742200 AT5G38970.1 26.415 477 331 9 1 470 1 464 5.24e-53 185
Msa0742200 AT2G29090.3 29.111 371 248 7 105 470 26 386 3.53e-50 176
Msa0742200 AT1G73340.1 24.845 483 337 6 2 471 11 480 1.51e-49 176
Msa0742200 AT5G05690.2 29.058 382 262 6 29 409 31 404 2.64e-49 174
Msa0742200 AT5G14400.2 25.393 445 300 6 34 473 1 418 3.10e-49 174
Msa0742200 AT1G19630.2 28.000 400 282 5 5 401 9 405 4.31e-49 174
Msa0742200 AT1G55940.2 25.358 489 340 14 2 474 16 495 9.06e-48 172
Msa0742200 AT1G55940.1 25.714 455 317 13 2 442 16 463 3.52e-46 167
Msa0742200 AT3G50660.2 29.073 399 255 7 29 403 39 433 5.93e-46 166
Msa0742200 AT1G65670.1 27.027 444 299 9 1 438 10 434 1.59e-45 166
Msa0742200 AT5G14400.3 25.121 414 278 6 34 442 1 387 1.91e-45 163
Msa0742200 AT5G38970.2 27.062 388 271 7 86 470 5 383 7.90e-44 159
Msa0742200 AT5G38970.4 27.062 388 271 7 86 470 5 383 7.90e-44 159
Msa0742200 AT5G05690.3 31.790 324 210 7 123 443 6 321 1.89e-43 157
Msa0742200 AT4G15300.3 27.069 447 297 13 2 438 1 428 8.72e-42 155
Msa0742200 AT4G15300.2 27.009 448 298 13 1 438 10 438 1.02e-41 155
Msa0742200 AT5G48000.2 26.596 470 310 13 17 469 23 474 1.16e-41 155
Msa0742200 AT5G48000.4 26.596 470 310 13 17 469 23 474 1.16e-41 155
Msa0742200 AT5G48000.7 26.596 470 310 13 17 469 23 474 1.16e-41 155
Msa0742200 AT5G48000.6 26.596 470 310 13 17 469 23 474 1.16e-41 155
Msa0742200 AT5G48000.5 26.596 470 310 13 17 469 23 474 1.16e-41 155
Msa0742200 AT5G48000.3 26.596 470 310 13 17 469 23 474 1.16e-41 155
Msa0742200 AT3G44970.1 26.998 463 311 12 24 472 30 479 2.40e-41 154
Msa0742200 AT5G38970.3 25.862 406 283 7 1 400 1 394 2.61e-41 152
Msa0742200 AT5G48000.1 26.652 469 309 13 17 468 64 514 2.66e-41 154
Msa0742200 AT5G36130.1 43.571 140 76 2 334 471 1 139 2.60e-39 139
Msa0742200 AT5G14400.1 25.641 390 258 6 89 473 2 364 6.32e-39 145
Msa0742200 AT1G78490.1 23.467 473 349 8 4 469 8 474 2.85e-38 145
Msa0742200 AT1G12740.3 22.102 371 280 4 2 368 1 366 7.11e-37 139
Msa0742200 AT4G15396.3 23.874 444 317 9 3 438 9 439 4.03e-36 139
Msa0742200 AT4G15396.1 23.874 444 317 9 3 438 9 439 5.03e-36 139
Msa0742200 AT4G36380.2 25.882 340 248 3 29 366 69 406 3.19e-34 133
Msa0742200 AT4G15393.2 24.270 445 312 11 3 438 9 437 5.41e-34 133
Msa0742200 AT4G15300.1 25.373 469 299 15 2 438 1 450 9.65e-34 133
Msa0742200 AT5G14400.4 24.852 338 241 4 34 366 1 330 8.70e-31 122
Msa0742200 AT4G15396.2 22.072 444 304 9 3 438 9 418 3.15e-27 114
Msa0742200 AT1G78490.2 22.794 408 303 7 3 404 7 408 1.04e-26 112
Msa0742200 AT3G30290.1 25.798 376 259 9 70 438 6 368 1.07e-26 112
Msa0742200 AT4G15396.4 22.963 405 293 8 3 401 9 400 2.63e-26 110
Msa0742200 AT5G67310.1 24.124 485 315 16 2 455 15 477 6.58e-26 110
Msa0742200 AT4G15310.1 23.515 421 306 9 24 438 31 441 6.79e-26 110
Msa0742200 AT4G15393.1 23.342 407 289 10 3 402 9 399 9.67e-25 106
Msa0742200 AT2G45550.1 25.625 480 304 17 7 446 9 475 1.04e-23 104
Msa0742200 AT5G25140.1 23.952 501 335 18 2 473 1 484 6.58e-22 99.0
Msa0742200 AT4G37410.1 23.529 493 331 18 5 468 7 482 3.03e-21 97.1
Msa0742200 AT4G37330.1 24.944 445 298 12 5 427 7 437 5.25e-21 96.3
Msa0742200 AT2G34490.1 23.913 506 325 17 2 471 11 492 6.76e-21 95.9
Msa0742200 AT4G15393.3 24.257 404 256 12 3 402 9 366 1.66e-20 93.2
Msa0742200 AT2G26170.1 22.495 489 305 13 7 442 21 488 1.88e-20 94.7
Msa0742200 AT5G57220.1 24.359 468 303 20 5 443 6 451 2.31e-20 94.0
Msa0742200 AT4G12320.1 23.319 476 314 17 9 446 19 481 2.54e-20 94.4
Msa0742200 AT4G37340.1 24.569 464 312 18 4 442 5 455 6.48e-20 92.8
Msa0742200 AT2G26170.2 28.516 256 157 8 197 442 166 405 6.69e-20 92.4
Msa0742200 AT4G37320.1 24.838 463 309 14 5 442 7 455 9.81e-20 92.4
Msa0742200 AT1G50520.1 25.314 478 305 15 5 443 15 479 1.12e-19 92.4
Msa0742200 AT3G48280.1 22.845 464 332 14 1 446 1 456 1.33e-19 91.7
Msa0742200 AT2G45570.1 24.105 419 280 13 60 446 64 476 1.86e-19 91.7
Msa0742200 AT3G20140.1 22.523 444 308 15 29 446 42 475 5.96e-19 90.1
Msa0742200 AT2G29090.4 23.158 285 204 5 28 309 48 320 8.65e-19 87.8
Msa0742200 AT5G42580.1 22.113 407 281 12 64 446 70 464 1.28e-18 89.0
Msa0742200 AT4G37430.1 22.947 475 317 16 1 442 1 459 1.52e-18 88.6
Msa0742200 AT5G47990.1 22.542 417 275 12 63 443 72 476 1.60e-18 88.6
Msa0742200 AT2G26710.1 24.138 377 258 12 90 446 120 488 1.82e-18 88.6
Msa0742200 AT5G25180.1 23.387 496 336 18 6 473 5 484 2.25e-18 88.2
Msa0742200 AT5G36220.1 25.370 473 299 19 5 442 8 461 3.21e-18 87.8
Msa0742200 AT5G25120.1 22.379 496 340 17 6 473 6 484 3.60e-18 87.4
Msa0742200 AT1G31800.1 21.525 446 299 11 37 446 111 541 3.87e-18 87.8
Msa0742200 AT3G25180.1 28.638 213 135 7 237 442 267 469 7.74e-18 86.7
Msa0742200 AT1G66540.2 27.155 232 156 6 214 442 62 283 8.38e-18 84.7
Msa0742200 AT4G37400.1 23.126 467 315 16 5 443 7 457 1.01e-17 86.3
Msa0742200 AT4G13770.1 23.493 481 318 18 2 446 1 467 1.30e-17 85.9
Msa0742200 AT5G06900.1 22.472 445 307 15 5 423 10 442 1.31e-17 85.9
Msa0742200 AT3G28740.1 25.714 385 234 15 87 442 102 463 1.70e-17 85.5
Msa0742200 AT1G66540.1 27.155 232 156 6 214 442 121 342 1.80e-17 84.3
Msa0742200 AT3G53130.1 22.222 432 287 11 56 453 103 519 2.32e-17 85.1
Msa0742200 AT1G33720.1 22.737 475 323 15 6 446 11 475 2.41e-17 85.1
Msa0742200 AT3G20110.1 24.421 475 317 16 4 449 11 472 2.54e-17 84.7
Msa0742200 AT3G20120.4 22.793 487 329 14 1 449 4 481 2.89e-17 84.7
Msa0742200 AT1G64940.1 28.889 225 145 6 232 445 258 478 3.21e-17 84.7
Msa0742200 AT2G34500.1 25.225 444 300 16 2 427 11 440 3.82e-17 84.3
Msa0742200 AT3G14680.1 24.444 405 265 15 69 446 95 485 4.25e-17 84.3
Msa0742200 AT4G15110.1 26.518 313 173 13 177 446 252 550 6.96e-17 84.0
Msa0742200 AT2G45560.1 25.156 481 305 19 7 446 9 475 7.61e-17 83.6
Msa0742200 AT3G20090.2 22.245 481 330 11 2 449 14 483 9.41e-17 83.2
Msa0742200 AT1G11680.1 21.459 466 333 14 1 448 10 460 1.00e-16 82.8
Msa0742200 AT5G52400.1 23.143 350 241 13 115 446 153 492 1.30e-16 82.8
Msa0742200 AT5G04330.1 23.779 471 280 17 27 446 30 472 1.72e-16 82.4
Msa0742200 AT2G28860.1 23.651 482 304 18 27 471 34 488 1.79e-16 82.0
Msa0742200 AT4G37370.1 21.692 461 298 16 4 427 5 439 1.95e-16 82.0
Msa0742200 AT3G20100.1 21.940 433 305 12 43 446 51 479 2.21e-16 82.0
Msa0742200 AT5G24900.2 30.348 201 122 7 273 467 210 398 2.76e-16 81.3
Msa0742200 AT3G26280.1 24.569 464 274 17 15 427 14 452 2.77e-16 81.6
Msa0742200 AT5G24910.1 26.866 268 173 9 216 468 270 529 2.98e-16 81.6
Msa0742200 AT3G26280.2 24.569 464 274 17 15 427 31 469 3.04e-16 81.6
Msa0742200 AT4G37360.1 23.696 460 307 19 11 442 12 455 3.35e-16 81.3
Msa0742200 AT3G14630.2 26.510 298 199 11 163 446 245 536 4.28e-16 81.3
Msa0742200 AT3G26290.1 24.729 461 294 16 21 446 23 465 4.44e-16 80.9
Msa0742200 AT3G14630.1 26.510 298 199 11 163 446 190 481 4.96e-16 80.9
Msa0742200 AT4G15360.1 23.319 476 323 15 5 449 15 479 5.31e-16 80.9
Msa0742200 AT3G14640.1 25.581 301 199 10 163 446 195 487 5.37e-16 80.9
Msa0742200 AT3G26290.2 24.729 461 294 16 21 446 36 478 5.70e-16 80.9
Msa0742200 AT3G14640.2 25.418 299 202 9 163 446 217 509 6.25e-16 80.9
Msa0742200 AT5G24900.1 30.348 201 122 7 273 467 327 515 6.90e-16 80.5
Msa0742200 AT4G15350.1 24.105 419 281 14 63 450 65 477 9.29e-16 80.1
Msa0742200 AT3G61040.1 30.303 198 127 5 244 433 258 452 1.17e-15 79.7
Msa0742200 AT3G32047.1 22.293 471 333 11 5 449 16 479 1.25e-15 79.7
Msa0742200 AT3G14610.1 24.503 302 209 9 159 446 189 485 1.42e-15 79.3
Msa0742200 AT5G44620.1 26.891 238 157 9 219 446 252 482 1.54e-15 79.3
Msa0742200 AT1G33720.4 25.424 295 193 9 174 446 54 343 1.94e-15 78.2
Msa0742200 AT1G33720.3 25.424 295 193 9 174 446 54 343 1.94e-15 78.2
Msa0742200 AT1G33720.5 25.424 295 193 9 174 446 54 343 1.94e-15 78.2
Msa0742200 AT4G13290.1 23.195 457 302 15 19 446 22 458 1.97e-15 79.0
Msa0742200 AT3G20935.1 26.971 241 144 6 234 446 69 305 1.98e-15 77.8
Msa0742200 AT1G64950.1 28.000 225 147 6 232 445 257 477 2.10e-15 79.0
Msa0742200 AT3G56630.1 24.252 301 194 10 169 442 173 466 2.23e-15 79.0
Msa0742200 AT3G10570.1 20.379 422 290 10 56 442 68 478 2.25e-15 79.0
Msa0742200 AT2G46950.1 23.438 384 261 10 86 449 176 546 3.42e-15 78.6
Msa0742200 AT4G31500.1 22.567 483 319 19 2 446 1 466 6.78e-15 77.4
Msa0742200 AT1G64930.1 29.612 206 129 6 251 445 278 478 8.89e-15 77.0
Msa0742200 AT3G48320.1 22.737 475 324 18 2 450 4 461 1.32e-14 76.3
Msa0742200 AT5G36220.2 27.615 239 157 8 208 442 89 315 1.47e-14 75.5
Msa0742200 AT5G24950.1 22.807 456 305 16 22 446 25 464 1.51e-14 76.3
Msa0742200 AT1G50560.1 24.793 484 313 17 5 449 15 486 1.57e-14 76.3
Msa0742200 AT4G27710.1 28.947 228 150 6 226 446 268 490 1.68e-14 76.3
Msa0742200 AT3G26270.1 28.879 232 144 8 227 446 248 470 1.80e-14 75.9
Msa0742200 AT3G44970.2 23.220 323 228 8 24 337 30 341 1.91e-14 75.1
Msa0742200 AT2G12190.1 27.753 227 147 6 232 445 257 479 2.22e-14 75.9
Msa0742200 AT3G20960.2 21.292 418 291 11 63 449 71 481 2.35e-14 75.9
Msa0742200 AT2G45580.2 27.442 215 141 7 239 446 116 322 2.48e-14 74.7
Msa0742200 AT1G33730.1 23.810 294 199 7 174 446 50 339 2.53e-14 74.7
Msa0742200 AT1G33730.2 23.810 294 199 7 174 446 50 339 2.53e-14 74.7
Msa0742200 AT3G48300.1 21.117 412 292 14 63 451 58 459 3.52e-14 75.1
Msa0742200 AT3G48300.2 21.117 412 292 14 63 451 60 461 3.54e-14 75.1
Msa0742200 AT2G45580.1 27.442 215 141 7 239 446 270 476 3.59e-14 75.1
Msa0742200 AT3G03470.1 28.497 193 128 4 265 447 288 480 6.67e-14 74.3
Msa0742200 AT5G06905.1 22.156 501 322 18 10 459 9 492 7.00e-14 74.3
Msa0742200 AT5G38450.1 26.158 367 234 11 102 443 132 486 7.40e-14 74.3
Msa0742200 AT3G26330.1 22.756 479 326 13 27 472 29 496 9.27e-14 73.9
Msa0742200 AT1G13110.1 23.176 466 290 18 6 423 3 448 1.44e-13 73.2
Msa0742200 AT1G13090.2 22.350 434 296 13 21 423 19 442 1.89e-13 72.8
Msa0742200 AT1G11600.1 19.672 488 338 14 18 466 24 496 2.56e-13 72.4
Msa0742200 AT5G25130.1 22.400 500 335 17 6 473 6 484 3.04e-13 72.0
Msa0742200 AT1G28430.1 22.695 423 291 15 44 435 51 468 3.33e-13 72.0
Msa0742200 AT1G67110.1 26.611 357 238 9 102 443 133 480 3.38e-13 72.0
Msa0742200 AT3G20130.1 21.602 412 291 10 63 446 72 479 4.72e-13 71.6
Msa0742200 AT3G26125.1 23.837 344 217 12 173 473 193 534 1.62e-12 70.1
Msa0742200 AT3G44250.1 24.222 450 268 20 21 423 19 442 3.34e-12 68.9
Msa0742200 AT1G74110.1 26.728 217 132 8 225 423 279 486 4.06e-12 68.9
Msa0742200 AT2G27010.1 22.545 448 284 17 63 473 65 486 4.15e-12 68.6
Msa0742200 AT5G07990.1 22.737 475 324 14 4 446 7 470 6.65e-12 68.2
Msa0742200 AT1G58260.1 19.753 486 341 15 4 446 11 490 1.22e-11 67.4
Msa0742200 AT4G36220.1 25.081 307 193 8 172 446 182 483 1.49e-11 67.0
Msa0742200 AT5G23190.1 21.429 336 228 12 173 474 210 543 1.52e-11 67.0
Msa0742200 AT5G04660.1 21.791 335 219 10 134 442 160 477 1.72e-11 66.6
Msa0742200 AT1G24540.1 22.713 317 215 9 161 447 178 494 1.93e-11 66.6
Msa0742200 AT2G44890.2 22.876 306 198 8 169 451 177 467 4.22e-11 65.5
Msa0742200 AT1G11610.2 27.586 261 162 10 217 467 234 477 5.37e-11 65.1
Msa0742200 AT1G11610.1 27.586 261 162 10 217 467 234 477 5.49e-11 65.1
Msa0742200 AT3G48290.1 21.867 407 285 16 63 446 62 458 6.79e-11 64.7
Msa0742200 AT2G27000.1 22.651 415 284 11 63 446 69 477 6.82e-11 64.7

Find 121 sgRNAs with CRISPR-Local

Find 390 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCATTTCAATCAATAATTA+AGG 0.150288 5_1:-62022742 Msa0742200:CDS
ATTTCAAAGCTGAGTTTATT+TGG 0.177572 5_1:-62023581 Msa0742200:CDS
TCACTTGGAATTCCCATTAT+TGG 0.200724 5_1:-62023686 Msa0742200:CDS
CAATTTCCTTTAACATGTTT+TGG 0.206785 5_1:+62022649 None:intergenic
CCCTATTGCTTTGTTCCATT+TGG 0.221258 5_1:-62021623 Msa0742200:CDS
ATATGTGCAGCTGTTCTTAA+AGG 0.254244 5_1:-62022417 Msa0742200:intron
GGATCAAACTGTGAAGGTTC+TGG 0.277530 5_1:+62021677 None:intergenic
TCTCGTATTCAACTTTCTTC+TGG 0.279210 5_1:+62022622 None:intergenic
GCCAAGACTTTGACCAATAA+TGG 0.291356 5_1:+62023673 None:intergenic
AATCAGTAGCTTGCTTAGTA+TGG 0.297529 5_1:-62022571 Msa0742200:CDS
TTCATTTACCTGCCACCCTT+TGG 0.299628 5_1:+62021815 None:intergenic
AATAAACTCAGCTTTGAAAT+AGG 0.306490 5_1:+62023584 None:intergenic
CCCTTAATTATTGATTGAAA+TGG 0.322436 5_1:+62022741 None:intergenic
TCATTTACCTGCCACCCTTT+GGG 0.336801 5_1:+62021816 None:intergenic
TTCTAATCACTTTCATTATC+CGG 0.339903 5_1:-62022461 Msa0742200:CDS
AAGGATCCAAAACATGTTAA+AGG 0.340489 5_1:-62022655 Msa0742200:CDS
GATTAAGTCTTGGCGGGAAT+TGG 0.341640 5_1:+62022590 None:intergenic
CCATGACAAGCATAGCATTA+TGG 0.342858 5_1:+62022508 None:intergenic
TGAAAGTGAGAGTCTTCATT+AGG 0.347580 5_1:+62022826 None:intergenic
CAGTCAATTAAGATGATATT+AGG 0.348659 5_1:-62023473 Msa0742200:CDS
AAGTAGCTTACAACTGAATT+TGG 0.352974 5_1:+62021526 None:intergenic
ACTACAACAGATATTGAATA+TGG 0.357661 5_1:-62021852 Msa0742200:CDS
TGTGTAAAGGGTGCATTAAT+TGG 0.358712 5_1:+62022705 None:intergenic
TGAACCTGGAGGGACCCTTT+TGG 0.363172 5_1:+62023706 None:intergenic
TATTGCTTTGTTCCATTTGG+AGG 0.372232 5_1:-62021620 Msa0742200:CDS
GAAAGTGAGAGTCTTCATTA+GGG 0.375121 5_1:+62022827 None:intergenic
TCTTAATTGACTGTGTTTGC+TGG 0.376593 5_1:+62023483 None:intergenic
GTAAAATTGATGAAGAAGTT+AGG 0.382161 5_1:-62023352 Msa0742200:CDS
ATAATTTGTTCTCTACTGTT+TGG 0.388428 5_1:-62022801 Msa0742200:CDS
CACTTTCATTATCCGGCTCT+TGG 0.392385 5_1:-62022454 Msa0742200:CDS
GCTATGCTTGTCATGGTTGC+AGG 0.394164 5_1:-62022501 Msa0742200:CDS
CCTTGACTTGGTGTTGGCAT+TGG 0.399805 5_1:+62021479 None:intergenic
CCCATTATTGGTCAAAGTCT+TGG 0.402311 5_1:-62023674 Msa0742200:CDS
AAGACTCTGGCTTCAAGAAC+GGG 0.416106 5_1:+62023390 None:intergenic
GATCAAACTGTGAAGGTTCT+GGG 0.417095 5_1:+62021678 None:intergenic
TCCAAATGGAACAAAGCAAT+AGG 0.421660 5_1:+62021622 None:intergenic
GATAGCTAATGGCAAGCTCT+TGG 0.427207 5_1:-62021979 Msa0742200:CDS
GAAGACAGAATCAACAAGTA+TGG 0.428167 5_1:-62023608 Msa0742200:CDS
AGAGAACTGGAATGAGTAAG+AGG 0.433239 5_1:+62023753 None:intergenic
GAGAGCTAAGATAGTTTCCT+TGG 0.437949 5_1:+62021437 None:intergenic
CCATTTCAATCAATAATTAA+GGG 0.443637 5_1:-62022741 Msa0742200:CDS
GTTTGCTAGGGTTGAAACTC+TGG 0.444311 5_1:-62021570 Msa0742200:CDS
CCAAGACTTTGACCAATAAT+GGG 0.446353 5_1:+62023674 None:intergenic
TTTCAGACAATTCTTTCAGC+AGG 0.447243 5_1:-62021505 Msa0742200:CDS
ATAGCTAATGGCAAGCTCTT+GGG 0.453915 5_1:-62021978 Msa0742200:CDS
TTTCAAAGATGAAGTATACT+TGG 0.454805 5_1:-62021932 Msa0742200:CDS
AAAGAACCAAACCATCCAAA+AGG 0.460934 5_1:-62023721 Msa0742200:CDS
AACAATATTCTCATCGCGAT+TGG 0.464065 5_1:+62023508 None:intergenic
TGCTTTGTTCCATTTGGAGG+GGG 0.465672 5_1:-62021617 Msa0742200:CDS
ATTGCTTTGTTCCATTTGGA+GGG 0.470980 5_1:-62021619 Msa0742200:CDS
GGAGGCACATTCAGATGCAT+TGG 0.476070 5_1:-62023331 Msa0742200:CDS
GTGTAAAGGGTGCATTAATT+GGG 0.486122 5_1:+62022706 None:intergenic
AATAGGGTGGGGTAGATGCC+AGG 0.491827 5_1:+62021639 None:intergenic
AGGGTCCCTCCAGGTTCACT+TGG 0.493375 5_1:-62023701 Msa0742200:CDS
ACCCTAGCAAACTCATATCC+TGG 0.493624 5_1:+62021581 None:intergenic
TTGCACTCTCCTTGAGGCTG+CGG 0.494896 5_1:+62022676 None:intergenic
CATTATACCCAAAGGGTGGC+AGG 0.498119 5_1:-62021823 Msa0742200:intron
GTCCAGGATATGAGTTTGCT+AGG 0.499490 5_1:-62021583 Msa0742200:CDS
GAGGCACATTCAGATGCATT+GGG 0.503281 5_1:-62023330 Msa0742200:CDS
AGAACAGCTGCACATATAGC+TGG 0.505191 5_1:+62022423 None:intergenic
ATGGGAATTCCAAGTGAACC+TGG 0.508975 5_1:+62023692 None:intergenic
TTGCTTAGTATGGTTGAAGA+TGG 0.509580 5_1:-62022561 Msa0742200:CDS
CCAAATGGAACAAAGCAATA+GGG 0.510553 5_1:+62021623 None:intergenic
GAACAGGAAGAGATAGCTAA+TGG 0.511615 5_1:-62021990 Msa0742200:CDS
TTCAGACAATTCTTTCAGCA+GGG 0.522736 5_1:-62021504 Msa0742200:CDS
AAAGACTCTGGCTTCAAGAA+CGG 0.523087 5_1:+62023389 None:intergenic
AAGAAGAACACTAGCCATCA+TGG 0.530283 5_1:+62023784 None:intergenic
AAGAACCAAACCATCCAAAA+GGG 0.531049 5_1:-62023720 Msa0742200:CDS
GTGGATACATTATACCCAAA+GGG 0.533054 5_1:-62021830 Msa0742200:CDS
TCCAAGTAGATTTGAAAACC+TGG 0.533843 5_1:-62021657 Msa0742200:CDS
GATAATGAAAGTGATTAGAA+TGG 0.534231 5_1:+62022464 None:intergenic
ACATATTGCTTCAAAGACTC+TGG 0.534467 5_1:+62023377 None:intergenic
CTACTGTTTGGTCTTGAGCG+TGG 0.535265 5_1:-62022789 Msa0742200:CDS
TTAAGATGATATTAGGCGAC+AGG 0.535591 5_1:-62023466 Msa0742200:CDS
CTGCGGTTGTAGTGTGTAAA+GGG 0.540198 5_1:+62022693 None:intergenic
GCAAGCTACTGATTAAGTCT+TGG 0.541480 5_1:+62022580 None:intergenic
GCTGCGGTTGTAGTGTGTAA+AGG 0.544877 5_1:+62022692 None:intergenic
AGAGCTAAGATAGTTTCCTT+GGG 0.546492 5_1:+62021438 None:intergenic
TCCAGGATATGAGTTTGCTA+GGG 0.548383 5_1:-62021582 Msa0742200:CDS
TTTCTGAATCCACCAAAGAT+GGG 0.552226 5_1:+62021876 None:intergenic
AGCTACTGATTAAGTCTTGG+CGG 0.552797 5_1:+62022583 None:intergenic
CCATCCAAAAGGGTCCCTCC+AGG 0.555753 5_1:-62023710 Msa0742200:CDS
GCTACTGATTAAGTCTTGGC+GGG 0.557526 5_1:+62022584 None:intergenic
AATCAATAATTAAGGGAATG+TGG 0.560339 5_1:-62022734 Msa0742200:CDS
TTGGGCAAAGTTCAATCAGT+AGG 0.560761 5_1:+62021456 None:intergenic
AAGTATACTTCATCTTTGAA+AGG 0.563144 5_1:+62021934 None:intergenic
CACATTCAGATGCATTGGGA+AGG 0.563148 5_1:-62023326 Msa0742200:CDS
GGATCCTTGCACTCTCCTTG+AGG 0.567712 5_1:+62022670 None:intergenic
TCAATCAGTAGGCCTTGACT+TGG 0.569123 5_1:+62021467 None:intergenic
CTGGTTCATTAGCCAAGAGC+CGG 0.570121 5_1:+62022442 None:intergenic
TTGCTTTGTTCCATTTGGAG+GGG 0.575275 5_1:-62021618 Msa0742200:CDS
GTATACTTGGAGAGTAGCAA+TGG 0.576473 5_1:-62021919 Msa0742200:CDS
AGTAGGCCTTGACTTGGTGT+TGG 0.577020 5_1:+62021473 None:intergenic
AAAGATCATAGCAGAGTCAG+AGG 0.577259 5_1:-62023422 Msa0742200:CDS
CTACTTGGATCAAACTGTGA+AGG 0.583030 5_1:+62021671 None:intergenic
CCATAATGCTATGCTTGTCA+TGG 0.584435 5_1:-62022508 Msa0742200:CDS
TGGCGCGCATAGCACGAAGA+AGG 0.584948 5_1:+62023651 None:intergenic
TACAACTGAATTTGGTCACA+AGG 0.589571 5_1:+62021534 None:intergenic
ATGGAACAAAGCAATAGGGT+GGG 0.590236 5_1:+62021627 None:intergenic
ACACTACAACCGCAGCCTCA+AGG 0.596576 5_1:-62022685 Msa0742200:CDS
TACTGATTGAACTTTGCCCA+AGG 0.603194 5_1:-62021454 Msa0742200:CDS
TGCTAGGGTTGAAACTCTGG+TGG 0.603607 5_1:-62021567 Msa0742200:CDS
ACATTCAGATGCATTGGGAA+GGG 0.609178 5_1:-62023325 Msa0742200:CDS
TGTCCATGAATCAAAACAGT+TGG 0.610102 5_1:+62023554 None:intergenic
GGAAGGGAAACAGCAGCTCA+AGG 0.612285 5_1:-62023309 Msa0742200:intron
AATGGAACAAAGCAATAGGG+TGG 0.612767 5_1:+62021626 None:intergenic
GGTGGATACATTATACCCAA+AGG 0.613475 5_1:-62021831 Msa0742200:CDS
ACAACAGATATTGAATATGG+TGG 0.615515 5_1:-62021849 Msa0742200:CDS
CTTGGGAGAGACTCTAACAT+GGG 0.619914 5_1:-62021961 Msa0742200:CDS
GAGTCTTTGAAGCAATATGT+TGG 0.626184 5_1:-62023374 Msa0742200:CDS
GCAGCCTCAAGGAGAGTGCA+AGG 0.626274 5_1:-62022674 Msa0742200:CDS
TAGCAATGGAAACTCTGAGA+AGG 0.628710 5_1:-62021905 Msa0742200:CDS
GGTTACATCAATGACTCACA+TGG 0.634614 5_1:-62021714 Msa0742200:CDS
TGGAACAAAGCAATAGGGTG+GGG 0.639436 5_1:+62021628 None:intergenic
TCTTGGGAGAGACTCTAACA+TGG 0.644772 5_1:-62021962 Msa0742200:CDS
GAATTCCAAGTGAACCTGGA+GGG 0.647416 5_1:+62023696 None:intergenic
CCAATGCCAACACCAAGTCA+AGG 0.656183 5_1:-62021479 Msa0742200:CDS
AAATTGATGAAGAAGTTAGG+AGG 0.660620 5_1:-62023349 Msa0742200:CDS
AAAGTGAGAGTCTTCATTAG+GGG 0.663881 5_1:+62022828 None:intergenic
GATACATTATACCCAAAGGG+TGG 0.706221 5_1:-62021827 Msa0742200:CDS
GGAATTCCAAGTGAACCTGG+AGG 0.730756 5_1:+62023695 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTCTGAT+AGG - chr5_1:62022368-62022387 Msa0742200:intron 10.0%
!!! TTTTTTTTTTTTTTTCTGAT+AGG - chr5_1:62022368-62022387 Msa0742200:intron 10.0%
!! TATAAAAATTGATCAAATTG+TGG - chr5_1:62022166-62022185 Msa0742200:intron 15.0%
!! TATAAAAATTGATCAAATTG+TGG - chr5_1:62022166-62022185 Msa0742200:intron 15.0%
!! CAAAAGCTAATAAAAATACA+TGG - chr5_1:62021964-62021983 Msa0742200:CDS 20.0%
!! TATGTTAATGTGTATTTACT+TGG + chr5_1:62022110-62022129 None:intergenic 20.0%
!!! ACTTGATTACATATTCTTTT+TGG - chr5_1:62022304-62022323 Msa0742200:intron 20.0%
!!! CTTGATTACATATTCTTTTT+GGG - chr5_1:62022305-62022324 Msa0742200:intron 20.0%
!! TCCATTTCAATCAATAATTA+AGG - chr5_1:62022482-62022501 Msa0742200:CDS 20.0%
!! CCATTTCAATCAATAATTAA+GGG - chr5_1:62022483-62022502 Msa0742200:CDS 20.0%
!! AGAGAAAACGAAAAAAATTT+AGG - chr5_1:62022969-62022988 Msa0742200:intron 20.0%
!! GAGAAAACGAAAAAAATTTA+GGG - chr5_1:62022970-62022989 Msa0742200:intron 20.0%
!! AGAAAACGAAAAAAATTTAG+GGG - chr5_1:62022971-62022990 Msa0742200:intron 20.0%
!!! TTGTCTTTTTATAGATCTTT+TGG - chr5_1:62023488-62023507 Msa0742200:CDS 20.0%
!!! TGTCTTTTTATAGATCTTTT+GGG - chr5_1:62023489-62023508 Msa0742200:CDS 20.0%
!! CAAAAGCTAATAAAAATACA+TGG - chr5_1:62021964-62021983 Msa0742200:CDS 20.0%
!! TATGTTAATGTGTATTTACT+TGG + chr5_1:62022110-62022129 None:intergenic 20.0%
!!! ACTTGATTACATATTCTTTT+TGG - chr5_1:62022304-62022323 Msa0742200:intron 20.0%
!!! CTTGATTACATATTCTTTTT+GGG - chr5_1:62022305-62022324 Msa0742200:intron 20.0%
!! TCCATTTCAATCAATAATTA+AGG - chr5_1:62022482-62022501 Msa0742200:CDS 20.0%
!! CCATTTCAATCAATAATTAA+GGG - chr5_1:62022483-62022502 Msa0742200:CDS 20.0%
!! AGAGAAAACGAAAAAAATTT+AGG - chr5_1:62022969-62022988 Msa0742200:intron 20.0%
!! GAGAAAACGAAAAAAATTTA+GGG - chr5_1:62022970-62022989 Msa0742200:intron 20.0%
!! AGAAAACGAAAAAAATTTAG+GGG - chr5_1:62022971-62022990 Msa0742200:intron 20.0%
!!! TTGTCTTTTTATAGATCTTT+TGG - chr5_1:62023488-62023507 Msa0742200:CDS 20.0%
!!! TGTCTTTTTATAGATCTTTT+GGG - chr5_1:62023489-62023508 Msa0742200:CDS 20.0%
!!! AATAAACTCAGCTTTGAAAT+AGG + chr5_1:62021643-62021662 None:intergenic 25.0%
! ATTTCAAAGCTGAGTTTATT+TGG - chr5_1:62021643-62021662 Msa0742200:CDS 25.0%
! CAGTCAATTAAGATGATATT+AGG - chr5_1:62021751-62021770 Msa0742200:intron 25.0%
! GTAAAATTGATGAAGAAGTT+AGG - chr5_1:62021872-62021891 Msa0742200:CDS 25.0%
! TACAATACTAGTACAGATAT+GGG - chr5_1:62022059-62022078 Msa0742200:intron 25.0%
!!! TTGGTCATTTTAGAAAAATC+CGG + chr5_1:62022091-62022110 None:intergenic 25.0%
! ATGACTTGATTTACTTGAAT+AGG - chr5_1:62022213-62022232 Msa0742200:intron 25.0%
! AGTAGTATTAAGTTACTTGA+TGG - chr5_1:62022244-62022263 Msa0742200:intron 25.0%
! GTAGTATTAAGTTACTTGAT+GGG - chr5_1:62022245-62022264 Msa0742200:intron 25.0%
! TAAGAAATGAAAACTGAAGT+AGG - chr5_1:62022329-62022348 Msa0742200:intron 25.0%
!!! ATAATTTGTTCTCTACTGTT+TGG - chr5_1:62022423-62022442 Msa0742200:CDS 25.0%
!! CCCTTAATTATTGATTGAAA+TGG + chr5_1:62022486-62022505 None:intergenic 25.0%
! AATCAATAATTAAGGGAATG+TGG - chr5_1:62022490-62022509 Msa0742200:CDS 25.0%
!! CAATTTCCTTTAACATGTTT+TGG + chr5_1:62022578-62022597 None:intergenic 25.0%
! AAAGTTGAATACGAGAAAAA+TGG - chr5_1:62022609-62022628 Msa0742200:CDS 25.0%
! GATAATGAAAGTGATTAGAA+TGG + chr5_1:62022763-62022782 None:intergenic 25.0%
! TTCTAATCACTTTCATTATC+CGG - chr5_1:62022763-62022782 Msa0742200:CDS 25.0%
! AAAAAATTTAGGGGATGTAA+AGG - chr5_1:62022980-62022999 Msa0742200:intron 25.0%
! ATCGAGAATACTTAAAATGA+AGG - chr5_1:62023176-62023195 Msa0742200:intron 25.0%
! AAGTATACTTCATCTTTGAA+AGG + chr5_1:62023293-62023312 None:intergenic 25.0%
! TTTCAAAGATGAAGTATACT+TGG - chr5_1:62023292-62023311 Msa0742200:intron 25.0%
! ACTACAACAGATATTGAATA+TGG - chr5_1:62023372-62023391 Msa0742200:CDS 25.0%
!!! AATAAACTCAGCTTTGAAAT+AGG + chr5_1:62021643-62021662 None:intergenic 25.0%
! ATTTCAAAGCTGAGTTTATT+TGG - chr5_1:62021643-62021662 Msa0742200:CDS 25.0%
! CAGTCAATTAAGATGATATT+AGG - chr5_1:62021751-62021770 Msa0742200:intron 25.0%
! GTAAAATTGATGAAGAAGTT+AGG - chr5_1:62021872-62021891 Msa0742200:CDS 25.0%
! TACAATACTAGTACAGATAT+GGG - chr5_1:62022059-62022078 Msa0742200:intron 25.0%
!!! TTGGTCATTTTAGAAAAATC+CGG + chr5_1:62022091-62022110 None:intergenic 25.0%
! ATGACTTGATTTACTTGAAT+AGG - chr5_1:62022213-62022232 Msa0742200:intron 25.0%
! AGTAGTATTAAGTTACTTGA+TGG - chr5_1:62022244-62022263 Msa0742200:intron 25.0%
! GTAGTATTAAGTTACTTGAT+GGG - chr5_1:62022245-62022264 Msa0742200:intron 25.0%
! TAAGAAATGAAAACTGAAGT+AGG - chr5_1:62022329-62022348 Msa0742200:intron 25.0%
!!! ATAATTTGTTCTCTACTGTT+TGG - chr5_1:62022423-62022442 Msa0742200:CDS 25.0%
!! CCCTTAATTATTGATTGAAA+TGG + chr5_1:62022486-62022505 None:intergenic 25.0%
! AATCAATAATTAAGGGAATG+TGG - chr5_1:62022490-62022509 Msa0742200:CDS 25.0%
!! CAATTTCCTTTAACATGTTT+TGG + chr5_1:62022578-62022597 None:intergenic 25.0%
! AAAGTTGAATACGAGAAAAA+TGG - chr5_1:62022609-62022628 Msa0742200:CDS 25.0%
! GATAATGAAAGTGATTAGAA+TGG + chr5_1:62022763-62022782 None:intergenic 25.0%
! TTCTAATCACTTTCATTATC+CGG - chr5_1:62022763-62022782 Msa0742200:CDS 25.0%
! AAAAAATTTAGGGGATGTAA+AGG - chr5_1:62022980-62022999 Msa0742200:intron 25.0%
! ATCGAGAATACTTAAAATGA+AGG - chr5_1:62023176-62023195 Msa0742200:intron 25.0%
! AAGTATACTTCATCTTTGAA+AGG + chr5_1:62023293-62023312 None:intergenic 25.0%
! TTTCAAAGATGAAGTATACT+TGG - chr5_1:62023292-62023311 Msa0742200:intron 25.0%
! ACTACAACAGATATTGAATA+TGG - chr5_1:62023372-62023391 Msa0742200:CDS 25.0%
AAATTGATGAAGAAGTTAGG+AGG - chr5_1:62021875-62021894 Msa0742200:CDS 30.0%
! AAATACATGGTGTTAACTTG+TGG - chr5_1:62021977-62021996 Msa0742200:CDS 30.0%
!! GTTAACTTGTGGTAATCTAT+AGG - chr5_1:62021988-62022007 Msa0742200:CDS 30.0%
GTACAATACTAGTACAGATA+TGG - chr5_1:62022058-62022077 Msa0742200:intron 30.0%
AAGGATCCAAAACATGTTAA+AGG - chr5_1:62022569-62022588 Msa0742200:CDS 30.0%
TTGTATGTCTCTCCTAAATT+TGG + chr5_1:62023025-62023044 None:intergenic 30.0%
AAATGAAGGCAAAGAAATCT+TGG - chr5_1:62023190-62023209 Msa0742200:intron 30.0%
! GATTTTTATGATTGCAGAAC+AGG - chr5_1:62023218-62023237 Msa0742200:intron 30.0%
ACAACAGATATTGAATATGG+TGG - chr5_1:62023375-62023394 Msa0742200:CDS 30.0%
AAGTAGCTTACAACTGAATT+TGG + chr5_1:62023701-62023720 None:intergenic 30.0%
AAATTGATGAAGAAGTTAGG+AGG - chr5_1:62021875-62021894 Msa0742200:CDS 30.0%
! AAATACATGGTGTTAACTTG+TGG - chr5_1:62021977-62021996 Msa0742200:CDS 30.0%
!! GTTAACTTGTGGTAATCTAT+AGG - chr5_1:62021988-62022007 Msa0742200:CDS 30.0%
GTACAATACTAGTACAGATA+TGG - chr5_1:62022058-62022077 Msa0742200:intron 30.0%
AAGGATCCAAAACATGTTAA+AGG - chr5_1:62022569-62022588 Msa0742200:CDS 30.0%
TTGTATGTCTCTCCTAAATT+TGG + chr5_1:62023025-62023044 None:intergenic 30.0%
AAATGAAGGCAAAGAAATCT+TGG - chr5_1:62023190-62023209 Msa0742200:intron 30.0%
! GATTTTTATGATTGCAGAAC+AGG - chr5_1:62023218-62023237 Msa0742200:intron 30.0%
ACAACAGATATTGAATATGG+TGG - chr5_1:62023375-62023394 Msa0742200:CDS 30.0%
AAGTAGCTTACAACTGAATT+TGG + chr5_1:62023701-62023720 None:intergenic 30.0%
!! CTTTTTAGCAGAAAGAGAAC+TGG + chr5_1:62021487-62021506 None:intergenic 35.0%
AAAGAACCAAACCATCCAAA+AGG - chr5_1:62021503-62021522 Msa0742200:CDS 35.0%
AAGAACCAAACCATCCAAAA+GGG - chr5_1:62021504-62021523 Msa0742200:CDS 35.0%
TCACTTGGAATTCCCATTAT+TGG - chr5_1:62021538-62021557 Msa0742200:CDS 35.0%
CCAAGACTTTGACCAATAAT+GGG + chr5_1:62021553-62021572 None:intergenic 35.0%
GAAGACAGAATCAACAAGTA+TGG - chr5_1:62021616-62021635 Msa0742200:CDS 35.0%
!!! ACACCAACTGTTTTGATTCA+TGG - chr5_1:62021667-62021686 Msa0742200:CDS 35.0%
TGTCCATGAATCAAAACAGT+TGG + chr5_1:62021673-62021692 None:intergenic 35.0%
!!! AACTGTTTTGATTCATGGAC+AGG - chr5_1:62021672-62021691 Msa0742200:CDS 35.0%
AACAATATTCTCATCGCGAT+TGG + chr5_1:62021719-62021738 None:intergenic 35.0%
TCTTAATTGACTGTGTTTGC+TGG + chr5_1:62021744-62021763 None:intergenic 35.0%
TTAAGATGATATTAGGCGAC+AGG - chr5_1:62021758-62021777 Msa0742200:intron 35.0%
ACATATTGCTTCAAAGACTC+TGG + chr5_1:62021850-62021869 None:intergenic 35.0%
!! GAGTCTTTGAAGCAATATGT+TGG - chr5_1:62021850-62021869 Msa0742200:CDS 35.0%
CTTGTGGTAATCTATAGGAT+CGG - chr5_1:62021993-62022012 Msa0742200:intron 35.0%
CAGATAGATTGTCCATTAAC+TGG + chr5_1:62022026-62022045 None:intergenic 35.0%
! CAGTTAATGGACAATCTATC+TGG - chr5_1:62022024-62022043 Msa0742200:intron 35.0%
AAAGTGAGAGTCTTCATTAG+GGG + chr5_1:62022399-62022418 None:intergenic 35.0%
GAAAGTGAGAGTCTTCATTA+GGG + chr5_1:62022400-62022419 None:intergenic 35.0%
TGAAAGTGAGAGTCTTCATT+AGG + chr5_1:62022401-62022420 None:intergenic 35.0%
! GTGTAAAGGGTGCATTAATT+GGG + chr5_1:62022521-62022540 None:intergenic 35.0%
! TGTGTAAAGGGTGCATTAAT+TGG + chr5_1:62022522-62022541 None:intergenic 35.0%
TCTCGTATTCAACTTTCTTC+TGG + chr5_1:62022605-62022624 None:intergenic 35.0%
!! AATCAGTAGCTTGCTTAGTA+TGG - chr5_1:62022653-62022672 Msa0742200:CDS 35.0%
TTGCTTAGTATGGTTGAAGA+TGG - chr5_1:62022663-62022682 Msa0742200:CDS 35.0%
ATATGTGCAGCTGTTCTTAA+AGG - chr5_1:62022807-62022826 Msa0742200:CDS 35.0%
AGCCTACAGAAGGAAAAATT+AGG - chr5_1:62022925-62022944 Msa0742200:intron 35.0%
GCCTACAGAAGGAAAAATTA+GGG - chr5_1:62022926-62022945 Msa0742200:intron 35.0%
! ACCCTAATTTTTCCTTCTGT+AGG + chr5_1:62022930-62022949 None:intergenic 35.0%
TACAGAAGGAAAAATTAGGG+TGG - chr5_1:62022929-62022948 Msa0742200:intron 35.0%
ACAGAAGGAAAAATTAGGGT+GGG - chr5_1:62022930-62022949 Msa0742200:intron 35.0%
AAATTTAGGGGATGTAAAGG+AGG - chr5_1:62022983-62023002 Msa0742200:intron 35.0%
TTTAGGAGAGACATACAAAC+AGG - chr5_1:62023027-62023046 Msa0742200:intron 35.0%
TCTTGCAAAATCTCAACTGT+CGG - chr5_1:62023076-62023095 Msa0742200:intron 35.0%
TTTCTGAATCCACCAAAGAT+GGG + chr5_1:62023351-62023370 None:intergenic 35.0%
! TTTTCTGAATCCACCAAAGA+TGG + chr5_1:62023352-62023371 None:intergenic 35.0%
GTGGATACATTATACCCAAA+GGG - chr5_1:62023394-62023413 Msa0742200:CDS 35.0%
TCCAAGTAGATTTGAAAACC+TGG - chr5_1:62023567-62023586 Msa0742200:CDS 35.0%
CCAAATGGAACAAAGCAATA+GGG + chr5_1:62023604-62023623 None:intergenic 35.0%
TCCAAATGGAACAAAGCAAT+AGG + chr5_1:62023605-62023624 None:intergenic 35.0%
! TATTGCTTTGTTCCATTTGG+AGG - chr5_1:62023604-62023623 Msa0742200:CDS 35.0%
! ATTGCTTTGTTCCATTTGGA+GGG - chr5_1:62023605-62023624 Msa0742200:CDS 35.0%
TACAACTGAATTTGGTCACA+AGG + chr5_1:62023693-62023712 None:intergenic 35.0%
TTTCAGACAATTCTTTCAGC+AGG - chr5_1:62023719-62023738 Msa0742200:CDS 35.0%
TTCAGACAATTCTTTCAGCA+GGG - chr5_1:62023720-62023739 Msa0742200:CDS 35.0%
!! CTTTTTAGCAGAAAGAGAAC+TGG + chr5_1:62021487-62021506 None:intergenic 35.0%
AAAGAACCAAACCATCCAAA+AGG - chr5_1:62021503-62021522 Msa0742200:CDS 35.0%
AAGAACCAAACCATCCAAAA+GGG - chr5_1:62021504-62021523 Msa0742200:CDS 35.0%
TCACTTGGAATTCCCATTAT+TGG - chr5_1:62021538-62021557 Msa0742200:CDS 35.0%
CCAAGACTTTGACCAATAAT+GGG + chr5_1:62021553-62021572 None:intergenic 35.0%
GAAGACAGAATCAACAAGTA+TGG - chr5_1:62021616-62021635 Msa0742200:CDS 35.0%
!!! ACACCAACTGTTTTGATTCA+TGG - chr5_1:62021667-62021686 Msa0742200:CDS 35.0%
TGTCCATGAATCAAAACAGT+TGG + chr5_1:62021673-62021692 None:intergenic 35.0%
!!! AACTGTTTTGATTCATGGAC+AGG - chr5_1:62021672-62021691 Msa0742200:CDS 35.0%
AACAATATTCTCATCGCGAT+TGG + chr5_1:62021719-62021738 None:intergenic 35.0%
TCTTAATTGACTGTGTTTGC+TGG + chr5_1:62021744-62021763 None:intergenic 35.0%
TTAAGATGATATTAGGCGAC+AGG - chr5_1:62021758-62021777 Msa0742200:intron 35.0%
ACATATTGCTTCAAAGACTC+TGG + chr5_1:62021850-62021869 None:intergenic 35.0%
!! GAGTCTTTGAAGCAATATGT+TGG - chr5_1:62021850-62021869 Msa0742200:CDS 35.0%
CTTGTGGTAATCTATAGGAT+CGG - chr5_1:62021993-62022012 Msa0742200:intron 35.0%
CAGATAGATTGTCCATTAAC+TGG + chr5_1:62022026-62022045 None:intergenic 35.0%
! CAGTTAATGGACAATCTATC+TGG - chr5_1:62022024-62022043 Msa0742200:intron 35.0%
AAAGTGAGAGTCTTCATTAG+GGG + chr5_1:62022399-62022418 None:intergenic 35.0%
GAAAGTGAGAGTCTTCATTA+GGG + chr5_1:62022400-62022419 None:intergenic 35.0%
TGAAAGTGAGAGTCTTCATT+AGG + chr5_1:62022401-62022420 None:intergenic 35.0%
! GTGTAAAGGGTGCATTAATT+GGG + chr5_1:62022521-62022540 None:intergenic 35.0%
! TGTGTAAAGGGTGCATTAAT+TGG + chr5_1:62022522-62022541 None:intergenic 35.0%
TCTCGTATTCAACTTTCTTC+TGG + chr5_1:62022605-62022624 None:intergenic 35.0%
!! AATCAGTAGCTTGCTTAGTA+TGG - chr5_1:62022653-62022672 Msa0742200:CDS 35.0%
TTGCTTAGTATGGTTGAAGA+TGG - chr5_1:62022663-62022682 Msa0742200:CDS 35.0%
ATATGTGCAGCTGTTCTTAA+AGG - chr5_1:62022807-62022826 Msa0742200:CDS 35.0%
AGCCTACAGAAGGAAAAATT+AGG - chr5_1:62022925-62022944 Msa0742200:intron 35.0%
GCCTACAGAAGGAAAAATTA+GGG - chr5_1:62022926-62022945 Msa0742200:intron 35.0%
! ACCCTAATTTTTCCTTCTGT+AGG + chr5_1:62022930-62022949 None:intergenic 35.0%
TACAGAAGGAAAAATTAGGG+TGG - chr5_1:62022929-62022948 Msa0742200:intron 35.0%
ACAGAAGGAAAAATTAGGGT+GGG - chr5_1:62022930-62022949 Msa0742200:intron 35.0%
AAATTTAGGGGATGTAAAGG+AGG - chr5_1:62022983-62023002 Msa0742200:intron 35.0%
TTTAGGAGAGACATACAAAC+AGG - chr5_1:62023027-62023046 Msa0742200:intron 35.0%
TCTTGCAAAATCTCAACTGT+CGG - chr5_1:62023076-62023095 Msa0742200:intron 35.0%
TTTCTGAATCCACCAAAGAT+GGG + chr5_1:62023351-62023370 None:intergenic 35.0%
! TTTTCTGAATCCACCAAAGA+TGG + chr5_1:62023352-62023371 None:intergenic 35.0%
GTGGATACATTATACCCAAA+GGG - chr5_1:62023394-62023413 Msa0742200:CDS 35.0%
TCCAAGTAGATTTGAAAACC+TGG - chr5_1:62023567-62023586 Msa0742200:CDS 35.0%
CCAAATGGAACAAAGCAATA+GGG + chr5_1:62023604-62023623 None:intergenic 35.0%
TCCAAATGGAACAAAGCAAT+AGG + chr5_1:62023605-62023624 None:intergenic 35.0%
! TATTGCTTTGTTCCATTTGG+AGG - chr5_1:62023604-62023623 Msa0742200:CDS 35.0%
! ATTGCTTTGTTCCATTTGGA+GGG - chr5_1:62023605-62023624 Msa0742200:CDS 35.0%
TACAACTGAATTTGGTCACA+AGG + chr5_1:62023693-62023712 None:intergenic 35.0%
TTTCAGACAATTCTTTCAGC+AGG - chr5_1:62023719-62023738 Msa0742200:CDS 35.0%
TTCAGACAATTCTTTCAGCA+GGG - chr5_1:62023720-62023739 Msa0742200:CDS 35.0%
AGAGAACTGGAATGAGTAAG+AGG + chr5_1:62021474-62021493 None:intergenic 40.0%
CCCATTATTGGTCAAAGTCT+TGG - chr5_1:62021550-62021569 Msa0742200:CDS 40.0%
GCCAAGACTTTGACCAATAA+TGG + chr5_1:62021554-62021573 None:intergenic 40.0%
AAAGATCATAGCAGAGTCAG+AGG - chr5_1:62021802-62021821 Msa0742200:intron 40.0%
! AAAGACTCTGGCTTCAAGAA+CGG + chr5_1:62021838-62021857 None:intergenic 40.0%
ACATTCAGATGCATTGGGAA+GGG - chr5_1:62021899-62021918 Msa0742200:CDS 40.0%
AGATTGTCCATTAACTGGAG+AGG + chr5_1:62022021-62022040 None:intergenic 40.0%
!! CAATCTATCTGGTATCGACA+CGG - chr5_1:62022035-62022054 Msa0742200:intron 40.0%
!! AATCTATCTGGTATCGACAC+GGG - chr5_1:62022036-62022055 Msa0742200:intron 40.0%
ATACTAGTACAGATATGGGC+AGG - chr5_1:62022063-62022082 Msa0742200:intron 40.0%
TACTAGTACAGATATGGGCA+GGG - chr5_1:62022064-62022083 Msa0742200:intron 40.0%
! AGCTACTGATTAAGTCTTGG+CGG + chr5_1:62022644-62022663 None:intergenic 40.0%
! GCAAGCTACTGATTAAGTCT+TGG + chr5_1:62022647-62022666 None:intergenic 40.0%
CCATGACAAGCATAGCATTA+TGG + chr5_1:62022719-62022738 None:intergenic 40.0%
CCATAATGCTATGCTTGTCA+TGG - chr5_1:62022716-62022735 Msa0742200:CDS 40.0%
ATGTAAAGGAGGCTGTATTG+CGG - chr5_1:62022994-62023013 Msa0742200:intron 40.0%
ATTGCGGAGGATCCAAATTT+AGG - chr5_1:62023010-62023029 Msa0742200:intron 40.0%
!! AACTGTCGGATTAGTCTAGA+GGG - chr5_1:62023090-62023109 Msa0742200:intron 40.0%
GAACAGGAAGAGATAGCTAA+TGG - chr5_1:62023234-62023253 Msa0742200:intron 40.0%
ATAGCTAATGGCAAGCTCTT+GGG - chr5_1:62023246-62023265 Msa0742200:intron 40.0%
GTATACTTGGAGAGTAGCAA+TGG - chr5_1:62023305-62023324 Msa0742200:intron 40.0%
! TAGCAATGGAAACTCTGAGA+AGG - chr5_1:62023319-62023338 Msa0742200:CDS 40.0%
! AGAAGGTTTTCTCCCATCTT+TGG - chr5_1:62023336-62023355 Msa0742200:CDS 40.0%
GGTGGATACATTATACCCAA+AGG - chr5_1:62023393-62023412 Msa0742200:CDS 40.0%
GATACATTATACCCAAAGGG+TGG - chr5_1:62023397-62023416 Msa0742200:CDS 40.0%
GGTTACATCAATGACTCACA+TGG - chr5_1:62023510-62023529 Msa0742200:CDS 40.0%
GATCAAACTGTGAAGGTTCT+GGG + chr5_1:62023549-62023568 None:intergenic 40.0%
CTACTTGGATCAAACTGTGA+AGG + chr5_1:62023556-62023575 None:intergenic 40.0%
! GCCAGGTTTTCAAATCTACT+TGG + chr5_1:62023571-62023590 None:intergenic 40.0%
ATGGAACAAAGCAATAGGGT+GGG + chr5_1:62023600-62023619 None:intergenic 40.0%
AATGGAACAAAGCAATAGGG+TGG + chr5_1:62023601-62023620 None:intergenic 40.0%
! CCCTATTGCTTTGTTCCATT+TGG - chr5_1:62023601-62023620 Msa0742200:CDS 40.0%
! TTGCTTTGTTCCATTTGGAG+GGG - chr5_1:62023606-62023625 Msa0742200:CDS 40.0%
!! TCCAGGATATGAGTTTGCTA+GGG - chr5_1:62023642-62023661 Msa0742200:CDS 40.0%
TTGGGCAAAGTTCAATCAGT+AGG + chr5_1:62023771-62023790 None:intergenic 40.0%
! TACTGATTGAACTTTGCCCA+AGG - chr5_1:62023770-62023789 Msa0742200:CDS 40.0%
AGAGAACTGGAATGAGTAAG+AGG + chr5_1:62021474-62021493 None:intergenic 40.0%
CCCATTATTGGTCAAAGTCT+TGG - chr5_1:62021550-62021569 Msa0742200:CDS 40.0%
GCCAAGACTTTGACCAATAA+TGG + chr5_1:62021554-62021573 None:intergenic 40.0%
AAAGATCATAGCAGAGTCAG+AGG - chr5_1:62021802-62021821 Msa0742200:intron 40.0%
! AAAGACTCTGGCTTCAAGAA+CGG + chr5_1:62021838-62021857 None:intergenic 40.0%
ACATTCAGATGCATTGGGAA+GGG - chr5_1:62021899-62021918 Msa0742200:CDS 40.0%
AGATTGTCCATTAACTGGAG+AGG + chr5_1:62022021-62022040 None:intergenic 40.0%
!! CAATCTATCTGGTATCGACA+CGG - chr5_1:62022035-62022054 Msa0742200:intron 40.0%
!! AATCTATCTGGTATCGACAC+GGG - chr5_1:62022036-62022055 Msa0742200:intron 40.0%
ATACTAGTACAGATATGGGC+AGG - chr5_1:62022063-62022082 Msa0742200:intron 40.0%
TACTAGTACAGATATGGGCA+GGG - chr5_1:62022064-62022083 Msa0742200:intron 40.0%
! AGCTACTGATTAAGTCTTGG+CGG + chr5_1:62022644-62022663 None:intergenic 40.0%
! GCAAGCTACTGATTAAGTCT+TGG + chr5_1:62022647-62022666 None:intergenic 40.0%
CCATGACAAGCATAGCATTA+TGG + chr5_1:62022719-62022738 None:intergenic 40.0%
CCATAATGCTATGCTTGTCA+TGG - chr5_1:62022716-62022735 Msa0742200:CDS 40.0%
ATGTAAAGGAGGCTGTATTG+CGG - chr5_1:62022994-62023013 Msa0742200:intron 40.0%
ATTGCGGAGGATCCAAATTT+AGG - chr5_1:62023010-62023029 Msa0742200:intron 40.0%
!! AACTGTCGGATTAGTCTAGA+GGG - chr5_1:62023090-62023109 Msa0742200:intron 40.0%
GAACAGGAAGAGATAGCTAA+TGG - chr5_1:62023234-62023253 Msa0742200:intron 40.0%
ATAGCTAATGGCAAGCTCTT+GGG - chr5_1:62023246-62023265 Msa0742200:intron 40.0%
GTATACTTGGAGAGTAGCAA+TGG - chr5_1:62023305-62023324 Msa0742200:intron 40.0%
! TAGCAATGGAAACTCTGAGA+AGG - chr5_1:62023319-62023338 Msa0742200:CDS 40.0%
! AGAAGGTTTTCTCCCATCTT+TGG - chr5_1:62023336-62023355 Msa0742200:CDS 40.0%
GGTGGATACATTATACCCAA+AGG - chr5_1:62023393-62023412 Msa0742200:CDS 40.0%
GATACATTATACCCAAAGGG+TGG - chr5_1:62023397-62023416 Msa0742200:CDS 40.0%
GGTTACATCAATGACTCACA+TGG - chr5_1:62023510-62023529 Msa0742200:CDS 40.0%
GATCAAACTGTGAAGGTTCT+GGG + chr5_1:62023549-62023568 None:intergenic 40.0%
CTACTTGGATCAAACTGTGA+AGG + chr5_1:62023556-62023575 None:intergenic 40.0%
! GCCAGGTTTTCAAATCTACT+TGG + chr5_1:62023571-62023590 None:intergenic 40.0%
ATGGAACAAAGCAATAGGGT+GGG + chr5_1:62023600-62023619 None:intergenic 40.0%
AATGGAACAAAGCAATAGGG+TGG + chr5_1:62023601-62023620 None:intergenic 40.0%
! CCCTATTGCTTTGTTCCATT+TGG - chr5_1:62023601-62023620 Msa0742200:CDS 40.0%
! TTGCTTTGTTCCATTTGGAG+GGG - chr5_1:62023606-62023625 Msa0742200:CDS 40.0%
!! TCCAGGATATGAGTTTGCTA+GGG - chr5_1:62023642-62023661 Msa0742200:CDS 40.0%
TTGGGCAAAGTTCAATCAGT+AGG + chr5_1:62023771-62023790 None:intergenic 40.0%
! TACTGATTGAACTTTGCCCA+AGG - chr5_1:62023770-62023789 Msa0742200:CDS 40.0%
GAATTCCAAGTGAACCTGGA+GGG + chr5_1:62021531-62021550 None:intergenic 45.0%
ATGGGAATTCCAAGTGAACC+TGG + chr5_1:62021535-62021554 None:intergenic 45.0%
!! GTCTTCCACCCATTTTTCTG+CGG + chr5_1:62021602-62021621 None:intergenic 45.0%
! AAGACTCTGGCTTCAAGAAC+GGG + chr5_1:62021837-62021856 None:intergenic 45.0%
GAGGCACATTCAGATGCATT+GGG - chr5_1:62021894-62021913 Msa0742200:CDS 45.0%
CACATTCAGATGCATTGGGA+AGG - chr5_1:62021898-62021917 Msa0742200:CDS 45.0%
ATCGGATCCTCTCCAGTTAA+TGG - chr5_1:62022011-62022030 Msa0742200:intron 45.0%
ACTAGTACAGATATGGGCAG+GGG - chr5_1:62022065-62022084 Msa0742200:intron 45.0%
TGGACAGAGATCTGATTCAG+AGG - chr5_1:62022186-62022205 Msa0742200:intron 45.0%
GGACAGAGATCTGATTCAGA+GGG - chr5_1:62022187-62022206 Msa0742200:intron 45.0%
CTGCGGTTGTAGTGTGTAAA+GGG + chr5_1:62022534-62022553 None:intergenic 45.0%
GATTAAGTCTTGGCGGGAAT+TGG + chr5_1:62022637-62022656 None:intergenic 45.0%
! GCTACTGATTAAGTCTTGGC+GGG + chr5_1:62022643-62022662 None:intergenic 45.0%
CACTTTCATTATCCGGCTCT+TGG - chr5_1:62022770-62022789 Msa0742200:CDS 45.0%
AGAACAGCTGCACATATAGC+TGG + chr5_1:62022804-62022823 None:intergenic 45.0%
TGTAGGCTGCATGGAAAAAG+AGG + chr5_1:62022913-62022932 None:intergenic 45.0%
! TTTTCCATGCAGCCTACAGA+AGG - chr5_1:62022915-62022934 Msa0742200:intron 45.0%
! TTTTCCTTCTGTAGGCTGCA+TGG + chr5_1:62022922-62022941 None:intergenic 45.0%
GAAGGAAAAATTAGGGTGGG+AGG - chr5_1:62022933-62022952 Msa0742200:intron 45.0%
! AGACATACAAACAGGCGTTG+AGG - chr5_1:62023035-62023054 Msa0742200:intron 45.0%
!! GACATACAAACAGGCGTTGA+GGG - chr5_1:62023036-62023055 Msa0742200:intron 45.0%
!! CAACTGTCGGATTAGTCTAG+AGG - chr5_1:62023089-62023108 Msa0742200:intron 45.0%
!! ACTGTCGGATTAGTCTAGAG+GGG - chr5_1:62023091-62023110 Msa0742200:intron 45.0%
GATAGCTAATGGCAAGCTCT+TGG - chr5_1:62023245-62023264 Msa0742200:intron 45.0%
TCTTGGGAGAGACTCTAACA+TGG - chr5_1:62023262-62023281 Msa0742200:intron 45.0%
CTTGGGAGAGACTCTAACAT+GGG - chr5_1:62023263-62023282 Msa0742200:intron 45.0%
! AGGTTTTCTCCCATCTTTGG+TGG - chr5_1:62023339-62023358 Msa0742200:CDS 45.0%
TCATTTACCTGCCACCCTTT+GGG + chr5_1:62023411-62023430 None:intergenic 45.0%
TTCATTTACCTGCCACCCTT+TGG + chr5_1:62023412-62023431 None:intergenic 45.0%
GGATCAAACTGTGAAGGTTC+TGG + chr5_1:62023550-62023569 None:intergenic 45.0%
TGGAACAAAGCAATAGGGTG+GGG + chr5_1:62023599-62023618 None:intergenic 45.0%
! TGCTTTGTTCCATTTGGAGG+GGG - chr5_1:62023607-62023626 Msa0742200:CDS 45.0%
! GTCCAGGATATGAGTTTGCT+AGG - chr5_1:62023641-62023660 Msa0742200:CDS 45.0%
ACCCTAGCAAACTCATATCC+TGG + chr5_1:62023646-62023665 None:intergenic 45.0%
! GTTTGCTAGGGTTGAAACTC+TGG - chr5_1:62023654-62023673 Msa0742200:CDS 45.0%
TCAATCAGTAGGCCTTGACT+TGG + chr5_1:62023760-62023779 None:intergenic 45.0%
GAATTCCAAGTGAACCTGGA+GGG + chr5_1:62021531-62021550 None:intergenic 45.0%
ATGGGAATTCCAAGTGAACC+TGG + chr5_1:62021535-62021554 None:intergenic 45.0%
!! GTCTTCCACCCATTTTTCTG+CGG + chr5_1:62021602-62021621 None:intergenic 45.0%
! AAGACTCTGGCTTCAAGAAC+GGG + chr5_1:62021837-62021856 None:intergenic 45.0%
GAGGCACATTCAGATGCATT+GGG - chr5_1:62021894-62021913 Msa0742200:CDS 45.0%
CACATTCAGATGCATTGGGA+AGG - chr5_1:62021898-62021917 Msa0742200:CDS 45.0%
ATCGGATCCTCTCCAGTTAA+TGG - chr5_1:62022011-62022030 Msa0742200:intron 45.0%
ACTAGTACAGATATGGGCAG+GGG - chr5_1:62022065-62022084 Msa0742200:intron 45.0%
TGGACAGAGATCTGATTCAG+AGG - chr5_1:62022186-62022205 Msa0742200:intron 45.0%
GGACAGAGATCTGATTCAGA+GGG - chr5_1:62022187-62022206 Msa0742200:intron 45.0%
CTGCGGTTGTAGTGTGTAAA+GGG + chr5_1:62022534-62022553 None:intergenic 45.0%
GATTAAGTCTTGGCGGGAAT+TGG + chr5_1:62022637-62022656 None:intergenic 45.0%
! GCTACTGATTAAGTCTTGGC+GGG + chr5_1:62022643-62022662 None:intergenic 45.0%
CACTTTCATTATCCGGCTCT+TGG - chr5_1:62022770-62022789 Msa0742200:CDS 45.0%
AGAACAGCTGCACATATAGC+TGG + chr5_1:62022804-62022823 None:intergenic 45.0%
TGTAGGCTGCATGGAAAAAG+AGG + chr5_1:62022913-62022932 None:intergenic 45.0%
! TTTTCCATGCAGCCTACAGA+AGG - chr5_1:62022915-62022934 Msa0742200:intron 45.0%
! TTTTCCTTCTGTAGGCTGCA+TGG + chr5_1:62022922-62022941 None:intergenic 45.0%
GAAGGAAAAATTAGGGTGGG+AGG - chr5_1:62022933-62022952 Msa0742200:intron 45.0%
! AGACATACAAACAGGCGTTG+AGG - chr5_1:62023035-62023054 Msa0742200:intron 45.0%
!! GACATACAAACAGGCGTTGA+GGG - chr5_1:62023036-62023055 Msa0742200:intron 45.0%
!! CAACTGTCGGATTAGTCTAG+AGG - chr5_1:62023089-62023108 Msa0742200:intron 45.0%
!! ACTGTCGGATTAGTCTAGAG+GGG - chr5_1:62023091-62023110 Msa0742200:intron 45.0%
GATAGCTAATGGCAAGCTCT+TGG - chr5_1:62023245-62023264 Msa0742200:intron 45.0%
TCTTGGGAGAGACTCTAACA+TGG - chr5_1:62023262-62023281 Msa0742200:intron 45.0%
CTTGGGAGAGACTCTAACAT+GGG - chr5_1:62023263-62023282 Msa0742200:intron 45.0%
! AGGTTTTCTCCCATCTTTGG+TGG - chr5_1:62023339-62023358 Msa0742200:CDS 45.0%
TCATTTACCTGCCACCCTTT+GGG + chr5_1:62023411-62023430 None:intergenic 45.0%
TTCATTTACCTGCCACCCTT+TGG + chr5_1:62023412-62023431 None:intergenic 45.0%
GGATCAAACTGTGAAGGTTC+TGG + chr5_1:62023550-62023569 None:intergenic 45.0%
TGGAACAAAGCAATAGGGTG+GGG + chr5_1:62023599-62023618 None:intergenic 45.0%
! TGCTTTGTTCCATTTGGAGG+GGG - chr5_1:62023607-62023626 Msa0742200:CDS 45.0%
! GTCCAGGATATGAGTTTGCT+AGG - chr5_1:62023641-62023660 Msa0742200:CDS 45.0%
ACCCTAGCAAACTCATATCC+TGG + chr5_1:62023646-62023665 None:intergenic 45.0%
! GTTTGCTAGGGTTGAAACTC+TGG - chr5_1:62023654-62023673 Msa0742200:CDS 45.0%
TCAATCAGTAGGCCTTGACT+TGG + chr5_1:62023760-62023779 None:intergenic 45.0%
!! ATTAAAATAAAATTAAAACT+TGG + chr5_1:62023131-62023150 None:intergenic 5.0%
!! ATTAAAATAAAATTAAAACT+TGG + chr5_1:62023131-62023150 None:intergenic 5.0%
! AGGGACCCTTTTGGATGGTT+TGG + chr5_1:62021512-62021531 None:intergenic 50.0%
GGAATTCCAAGTGAACCTGG+AGG + chr5_1:62021532-62021551 None:intergenic 50.0%
CGCCAACACCGCAGAAAAAT+GGG - chr5_1:62021591-62021610 Msa0742200:CDS 50.0%
!! CACCCATTTTTCTGCGGTGT+TGG + chr5_1:62021596-62021615 None:intergenic 50.0%
CAACACCGCAGAAAAATGGG+TGG - chr5_1:62021594-62021613 Msa0742200:CDS 50.0%
! GGAGGCACATTCAGATGCAT+TGG - chr5_1:62021893-62021912 Msa0742200:CDS 50.0%
!! CTACTGTTTGGTCTTGAGCG+TGG - chr5_1:62022435-62022454 Msa0742200:CDS 50.0%
GCTGCGGTTGTAGTGTGTAA+AGG + chr5_1:62022535-62022554 None:intergenic 50.0%
GCTATGCTTGTCATGGTTGC+AGG - chr5_1:62022723-62022742 Msa0742200:CDS 50.0%
CTGGTTCATTAGCCAAGAGC+CGG + chr5_1:62022785-62022804 None:intergenic 50.0%
TAAAGGAGGCTGTATTGCGG+AGG - chr5_1:62022997-62023016 Msa0742200:intron 50.0%
CATTATACCCAAAGGGTGGC+AGG - chr5_1:62023401-62023420 Msa0742200:CDS 50.0%
ATTCTTGCTCCCCCTCCAAA+TGG + chr5_1:62023619-62023638 None:intergenic 50.0%
TGCTAGGGTTGAAACTCTGG+TGG - chr5_1:62023657-62023676 Msa0742200:CDS 50.0%
!! CCTTGACTTGGTGTTGGCAT+TGG + chr5_1:62023748-62023767 None:intergenic 50.0%
CCAATGCCAACACCAAGTCA+AGG - chr5_1:62023745-62023764 Msa0742200:CDS 50.0%
!! AGTAGGCCTTGACTTGGTGT+TGG + chr5_1:62023754-62023773 None:intergenic 50.0%
! AGGGACCCTTTTGGATGGTT+TGG + chr5_1:62021512-62021531 None:intergenic 50.0%
GGAATTCCAAGTGAACCTGG+AGG + chr5_1:62021532-62021551 None:intergenic 50.0%
CGCCAACACCGCAGAAAAAT+GGG - chr5_1:62021591-62021610 Msa0742200:CDS 50.0%
!! CACCCATTTTTCTGCGGTGT+TGG + chr5_1:62021596-62021615 None:intergenic 50.0%
CAACACCGCAGAAAAATGGG+TGG - chr5_1:62021594-62021613 Msa0742200:CDS 50.0%
! GGAGGCACATTCAGATGCAT+TGG - chr5_1:62021893-62021912 Msa0742200:CDS 50.0%
!! CTACTGTTTGGTCTTGAGCG+TGG - chr5_1:62022435-62022454 Msa0742200:CDS 50.0%
GCTGCGGTTGTAGTGTGTAA+AGG + chr5_1:62022535-62022554 None:intergenic 50.0%
GCTATGCTTGTCATGGTTGC+AGG - chr5_1:62022723-62022742 Msa0742200:CDS 50.0%
CTGGTTCATTAGCCAAGAGC+CGG + chr5_1:62022785-62022804 None:intergenic 50.0%
TAAAGGAGGCTGTATTGCGG+AGG - chr5_1:62022997-62023016 Msa0742200:intron 50.0%
CATTATACCCAAAGGGTGGC+AGG - chr5_1:62023401-62023420 Msa0742200:CDS 50.0%
ATTCTTGCTCCCCCTCCAAA+TGG + chr5_1:62023619-62023638 None:intergenic 50.0%
TGCTAGGGTTGAAACTCTGG+TGG - chr5_1:62023657-62023676 Msa0742200:CDS 50.0%
!! CCTTGACTTGGTGTTGGCAT+TGG + chr5_1:62023748-62023767 None:intergenic 50.0%
CCAATGCCAACACCAAGTCA+AGG - chr5_1:62023745-62023764 Msa0742200:CDS 50.0%
!! AGTAGGCCTTGACTTGGTGT+TGG + chr5_1:62023754-62023773 None:intergenic 50.0%
! TGAACCTGGAGGGACCCTTT+TGG + chr5_1:62021521-62021540 None:intergenic 55.0%
GCGCCAACACCGCAGAAAAA+TGG - chr5_1:62021590-62021609 Msa0742200:CDS 55.0%
GGAAGGGAAACAGCAGCTCA+AGG - chr5_1:62021915-62021934 Msa0742200:CDS 55.0%
ACACTACAACCGCAGCCTCA+AGG - chr5_1:62022539-62022558 Msa0742200:CDS 55.0%
TTGCACTCTCCTTGAGGCTG+CGG + chr5_1:62022551-62022570 None:intergenic 55.0%
GGATCCTTGCACTCTCCTTG+AGG + chr5_1:62022557-62022576 None:intergenic 55.0%
GAGAGAGAGAGAGACGAGCT+AGG - chr5_1:62022885-62022904 Msa0742200:intron 55.0%
AATAGGGTGGGGTAGATGCC+AGG + chr5_1:62023588-62023607 None:intergenic 55.0%
GGGGGAGCAAGAATATGTCC+AGG - chr5_1:62023625-62023644 Msa0742200:CDS 55.0%
! TGAACCTGGAGGGACCCTTT+TGG + chr5_1:62021521-62021540 None:intergenic 55.0%
GCGCCAACACCGCAGAAAAA+TGG - chr5_1:62021590-62021609 Msa0742200:CDS 55.0%
GGAAGGGAAACAGCAGCTCA+AGG - chr5_1:62021915-62021934 Msa0742200:CDS 55.0%
ACACTACAACCGCAGCCTCA+AGG - chr5_1:62022539-62022558 Msa0742200:CDS 55.0%
TTGCACTCTCCTTGAGGCTG+CGG + chr5_1:62022551-62022570 None:intergenic 55.0%
GGATCCTTGCACTCTCCTTG+AGG + chr5_1:62022557-62022576 None:intergenic 55.0%
GAGAGAGAGAGAGACGAGCT+AGG - chr5_1:62022885-62022904 Msa0742200:intron 55.0%
AATAGGGTGGGGTAGATGCC+AGG + chr5_1:62023588-62023607 None:intergenic 55.0%
GGGGGAGCAAGAATATGTCC+AGG - chr5_1:62023625-62023644 Msa0742200:CDS 55.0%
! CCTGGAGGGACCCTTTTGGA+TGG + chr5_1:62021517-62021536 None:intergenic 60.0%
CCATCCAAAAGGGTCCCTCC+AGG - chr5_1:62021514-62021533 Msa0742200:CDS 60.0%
AGGGTCCCTCCAGGTTCACT+TGG - chr5_1:62021523-62021542 Msa0742200:CDS 60.0%
TGGCGCGCATAGCACGAAGA+AGG + chr5_1:62021576-62021595 None:intergenic 60.0%
GTACAGATATGGGCAGGGGC+CGG - chr5_1:62022069-62022088 Msa0742200:intron 60.0%
! GCAGCCTCAAGGAGAGTGCA+AGG - chr5_1:62022550-62022569 Msa0742200:CDS 60.0%
! CCTGGAGGGACCCTTTTGGA+TGG + chr5_1:62021517-62021536 None:intergenic 60.0%
CCATCCAAAAGGGTCCCTCC+AGG - chr5_1:62021514-62021533 Msa0742200:CDS 60.0%
AGGGTCCCTCCAGGTTCACT+TGG - chr5_1:62021523-62021542 Msa0742200:CDS 60.0%
TGGCGCGCATAGCACGAAGA+AGG + chr5_1:62021576-62021595 None:intergenic 60.0%
GTACAGATATGGGCAGGGGC+CGG - chr5_1:62022069-62022088 Msa0742200:intron 60.0%
! GCAGCCTCAAGGAGAGTGCA+AGG - chr5_1:62022550-62022569 Msa0742200:CDS 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 62021442 62023804 62021442 ID=Msa0742200;Name=Msa0742200
chr5_1 mRNA 62021442 62023804 62021442 ID=Msa0742200-mRNA-1;Parent=Msa0742200;Name=Msa0742200-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|1|1|4|0|474
chr5_1 exon 62023310 62023804 62023310 ID=Msa0742200-mRNA-1:exon:18183;Parent=Msa0742200-mRNA-1
chr5_1 exon 62022418 62022856 62022418 ID=Msa0742200-mRNA-1:exon:18182;Parent=Msa0742200-mRNA-1
chr5_1 exon 62021824 62022011 62021824 ID=Msa0742200-mRNA-1:exon:18181;Parent=Msa0742200-mRNA-1
chr5_1 exon 62021442 62021744 62021442 ID=Msa0742200-mRNA-1:exon:18180;Parent=Msa0742200-mRNA-1
chr5_1 CDS 62023310 62023804 62023310 ID=Msa0742200-mRNA-1:cds;Parent=Msa0742200-mRNA-1
chr5_1 CDS 62022418 62022856 62022418 ID=Msa0742200-mRNA-1:cds;Parent=Msa0742200-mRNA-1
chr5_1 CDS 62021824 62022011 62021824 ID=Msa0742200-mRNA-1:cds;Parent=Msa0742200-mRNA-1
chr5_1 CDS 62021442 62021744 62021442 ID=Msa0742200-mRNA-1:cds;Parent=Msa0742200-mRNA-1
Gene Sequence

>Msa0742200

ATGATGGCTAGTGTTCTTCTTGTTGCTCTCCTCTTACTCATTCCAGTTCTCTTTCTGCTAAAAAGAACCAAACCATCCAAAAGGGTCCCTCCAGGTTCACTTGGAATTCCCATTATTGGTCAAAGTCTTGGCCTTCTTCGTGCTATGCGCGCCAACACCGCAGAAAAATGGGTGGAAGACAGAATCAACAAGTATGGTCCTATTTCAAAGCTGAGTTTATTTGGAACACCAACTGTTTTGATTCATGGACAGGCTGCGAATAAGTTTATATTCACCAATCGCGATGAGAATATTGTTAACCAGCAAACACAGTCAATTAAGATGATATTAGGCGACAGGAACTTGCTTGAACTGAGTAGCAAAGATCATAGCAGAGTCAGAGGTGCACTTGTCCCGTTCTTGAAGCCAGAGTCTTTGAAGCAATATGTTGGTAAAATTGATGAAGAAGTTAGGAGGCACATTCAGATGCATTGGGAAGGGAAACAGCAGCTCAAGGTATTGCCCCTAATGAAGACTCTCACTTTCAACATAATTTGTTCTCTACTGTTTGGTCTTGAGCGTGGAAAACAAAGAGATCAATTCATGAATCCATTTCAATCAATAATTAAGGGAATGTGGTCAGTCCCAATTAATGCACCCTTTACACACTACAACCGCAGCCTCAAGGAGAGTGCAAGGATCCAAAACATGTTAAAGGAAATTGTGCACCAGAAGAAAGTTGAATACGAGAAAAATGGCGCCAATTCCCGCCAAGACTTAATCAGTAGCTTGCTTAGTATGGTTGAAGATGGAAAACAAGTTTTAACTGAGAACGAAATTATCCATAATGCTATGCTTGTCATGGTTGCAGGACATGATACATCATCCATTCTAATCACTTTCATTATCCGGCTCTTGGCTAATGAACCAGCTATATGTGCAGCTGTTCTTAAAGAACAGGAAGAGATAGCTAATGGCAAGCTCTTGGGAGAGACTCTAACATGGGAAGACCTTTCAAAGATGAAGTATACTTGGAGAGTAGCAATGGAAACTCTGAGAAGGTTTTCTCCCATCTTTGGTGGATTCAGAAAAACTACAACAGATATTGAATATGGTGGATACATTATACCCAAAGGGTGGCAGATCTTTTGGGTTACATCAATGACTCACATGGACAACAACATTTTCCCAGAACCTTCACAGTTTGATCCAAGTAGATTTGAAAACCTGGCATCTACCCCACCCTATTGCTTTGTTCCATTTGGAGGGGGAGCAAGAATATGTCCAGGATATGAGTTTGCTAGGGTTGAAACTCTGGTGGCGATTCATTACCTTGTGACCAAATTCAGTTGTAAGCTACTTTCAGACAATTCTTTCAGCAGGGATCCAATGCCAACACCAAGTCAAGGCCTACTGATTGAACTTTGCCCAAGGAAACTATCTTAG

Protein sequence

>Msa0742200

MMASVLLVALLLLIPVLFLLKRTKPSKRVPPGSLGIPIIGQSLGLLRAMRANTAEKWVEDRINKYGPISKLSLFGTPTVLIHGQAANKFIFTNRDENIVNQQTQSIKMILGDRNLLELSSKDHSRVRGALVPFLKPESLKQYVGKIDEEVRRHIQMHWEGKQQLKVLPLMKTLTFNIICSLLFGLERGKQRDQFMNPFQSIIKGMWSVPINAPFTHYNRSLKESARIQNMLKEIVHQKKVEYEKNGANSRQDLISSLLSMVEDGKQVLTENEIIHNAMLVMVAGHDTSSILITFIIRLLANEPAICAAVLKEQEEIANGKLLGETLTWEDLSKMKYTWRVAMETLRRFSPIFGGFRKTTTDIEYGGYIIPKGWQIFWVTSMTHMDNNIFPEPSQFDPSRFENLASTPPYCFVPFGGGARICPGYEFARVETLVAIHYLVTKFSCKLLSDNSFSRDPMPTPSQGLLIELCPRKLS*