AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0311540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311540 MtrunA17_Chr8g0361451 80.000 200 34 1 45 238 1 200 3.26e-112 326
Msa0311540 MtrunA17_Chr8g0361451 57.812 192 38 1 242 390 9 200 1.10e-67 213
Msa0311540 MtrunA17_Chr2g0318961 79.500 200 35 1 45 238 1 200 1.42e-110 322
Msa0311540 MtrunA17_Chr2g0318961 60.417 192 33 1 242 390 9 200 2.59e-71 222
Msa0311540 MtrunA17_Chr4g0048841 78.283 198 37 1 50 241 41 238 3.10e-107 315
Msa0311540 MtrunA17_Chr4g0048841 61.000 200 35 1 237 393 39 238 1.17e-73 229
Msa0311540 MtrunA17_Chr2g0280641 73.399 203 48 1 45 241 1 203 5.41e-101 298
Msa0311540 MtrunA17_Chr2g0280641 75.385 195 5 1 242 393 9 203 7.59e-94 280
Msa0311540 MtrunA17_Chr5g0429671 65.829 199 61 2 47 238 4 202 3.48e-89 268
Msa0311540 MtrunA17_Chr5g0429671 51.813 193 49 2 242 390 10 202 3.90e-60 193
Msa0311540 MtrunA17_Chr4g0034601 64.975 197 62 2 48 237 52 248 6.93e-83 253
Msa0311540 MtrunA17_Chr4g0034601 45.833 192 60 2 242 389 57 248 1.96e-46 159
Msa0311540 MtrunA17_Chr5g0403681 62.500 200 68 2 48 240 53 252 1.10e-80 248
Msa0311540 MtrunA17_Chr5g0403681 46.667 195 60 2 242 392 58 252 1.40e-47 162
Msa0311540 MtrunA17_Chr4g0048831 83.333 120 16 1 122 241 1 116 1.72e-65 204
Msa0311540 MtrunA17_Chr4g0048831 81.690 71 13 0 323 393 46 116 1.46e-33 121
Msa0311540 MtrunA17_Chr8g0361461 76.923 117 27 0 122 238 1 117 2.01e-59 188
Msa0311540 MtrunA17_Chr8g0361461 68.493 73 23 0 318 390 45 117 5.53e-26 101
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0311540 AT4G27270.1 78.607 201 37 1 45 239 1 201 8.68e-111 323
Msa0311540 AT4G27270.1 59.067 193 36 1 242 391 9 201 2.76e-71 222
Msa0311540 AT5G54500.1 78.218 202 38 1 45 240 1 202 8.65e-110 320
Msa0311540 AT5G54500.1 60.825 194 33 1 242 392 9 202 2.76e-72 225
Msa0311540 AT4G27270.3 77.368 190 37 1 56 239 1 190 3.15e-102 301
Msa0311540 AT4G27270.3 58.947 190 35 1 245 391 1 190 2.17e-69 217
Msa0311540 AT4G27270.2 77.368 190 37 1 56 239 1 190 3.15e-102 301
Msa0311540 AT4G27270.2 58.947 190 35 1 245 391 1 190 2.17e-69 217
Msa0311540 AT5G58800.1 64.322 199 64 2 47 238 4 202 3.13e-86 261
Msa0311540 AT5G58800.1 51.813 193 49 2 242 390 10 202 1.20e-58 190
Msa0311540 AT5G58800.2 64.322 199 64 2 47 238 4 202 3.13e-86 261
Msa0311540 AT5G58800.2 51.813 193 49 2 242 390 10 202 1.20e-58 190
Msa0311540 AT4G36750.1 62.944 197 66 2 48 237 74 270 1.51e-81 251
Msa0311540 AT4G36750.1 47.396 192 57 2 242 389 79 270 1.09e-50 171
Msa0311540 AT4G27270.4 80.000 150 24 1 96 239 1 150 9.27e-81 244
Msa0311540 AT4G27270.4 54.667 150 25 1 285 391 1 150 5.16e-46 155
Msa0311540 AT5G54500.2 75.309 162 34 1 45 200 1 162 1.36e-80 248
Msa0311540 AT5G54500.2 57.792 154 22 1 242 352 9 162 7.72e-50 168

Find 89 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTCATTTGCTGAAATAAT+TGG 0.177953 2_4:-6390183 None:intergenic
ACCTCTTCTGGCAATATTTC+AGG 0.186131 2_4:-6390123 None:intergenic
ATTTCTTCAGACAATATTTC+TGG 0.196797 2_4:-6396070 None:intergenic
CCATATGGTTCAGGAACTTT+TGG 0.217112 2_4:+6397836 Msa0311540:CDS
TACTCAATTCAAAGCATTTA+TGG 0.233806 2_4:+6390260 Msa0311540:CDS
AGAAACCAAAAGGGCGTTCT+TGG 0.308627 2_4:-6389707 None:intergenic
TCAGCTTCAGCAAGCTGTTT+AGG 0.310193 2_4:-6396142 None:intergenic
ATAATTGGAACATCACTCTT+TGG 0.328363 2_4:-6390168 None:intergenic
GTGCATTATATAAATGGAAT+TGG 0.330285 2_4:+6389635 None:intergenic
CATCAGGGAAAATACTTTGC+TGG 0.334949 2_4:+6397908 Msa0311540:CDS
GTACCTATTGGATACACATT+TGG 0.364946 2_4:+6397773 Msa0311540:CDS
ACTCACCAAGAACGCCCTTT+TGG 0.367633 2_4:+6389702 Msa0311540:CDS
GAGGTGCTTTCATCTTCCTT+AGG 0.379219 2_4:-6396093 None:intergenic
TTTAGCTACTATTCTATGTA+TGG 0.386282 2_4:+6389906 Msa0311540:intron
CATCAAGGGAAATACTTTGC+GGG 0.388451 2_4:+6391101 Msa0311540:CDS
TGGTGCACACAGAAACTTGC+AGG 0.402973 2_4:+6390300 Msa0311540:CDS
ATCTTCCCAAGAACCTCTTC+TGG 0.413268 2_4:-6390135 None:intergenic
CAAGTTTCTGTGTGCACCAT+AGG 0.415808 2_4:-6390296 None:intergenic
AAAGCATTTATGGATACAAC+TGG 0.420143 2_4:+6390270 Msa0311540:CDS
TCCAACAAGATTTGGAATGA+TGG 0.421484 2_4:+6390236 Msa0311540:intron
GACATCATTCCATATCTTGC+TGG 0.429420 2_4:-6396184 None:intergenic
TATTGCCAGAAGAGGTTCTT+GGG 0.434381 2_4:+6390130 Msa0311540:CDS
GGTGGATCACCATATGGTTC+AGG 0.438436 2_4:+6397827 Msa0311540:CDS
GTGCCCGTTGGATACACATT+TGG 0.442396 2_4:+6390966 Msa0311540:CDS
AGAACCTAGTGAGTTAGAAT+TGG 0.452588 2_4:+6397874 Msa0311540:CDS
CTGTCTCTATAGAAACCAAA+AGG 0.458141 2_4:-6389717 None:intergenic
GCACCAAATGTGTATCCAAT+AGG 0.462098 2_4:-6397776 None:intergenic
TATTCTATGTATGGACATGT+TGG 0.462480 2_4:+6389915 Msa0311540:CDS
AATGGAGTTGAATCCATAGA+AGG 0.462725 2_4:+6389960 Msa0311540:CDS
CTAGCTGAAGAGATTCTAAA+GGG 0.480491 2_4:+6395765 Msa0311540:CDS
TATGGTGCTGGAACTTATGC+AGG 0.483004 2_4:+6391032 Msa0311540:CDS
CCAAAAGTTCCTGAACCATA+TGG 0.483267 2_4:-6397836 None:intergenic
ATATTGCCAGAAGAGGTTCT+TGG 0.489085 2_4:+6390129 Msa0311540:CDS
GCTAGCTGAAGAGATTCTAA+AGG 0.492200 2_4:+6395764 Msa0311540:CDS
TTTAGTTACCATTCTGTGTA+CGG 0.493434 2_4:+6395729 Msa0311540:intron
ATTGGATACACATTTGGTGC+TGG 0.493510 2_4:+6397779 Msa0311540:CDS
GCATAAGTTCCAGCACCATA+TGG 0.494566 2_4:-6391029 None:intergenic
TCATCAAGGGAAATACTTTG+CGG 0.497889 2_4:+6391100 Msa0311540:CDS
AATGAGCTTCTTGAGGCTGA+TGG 0.504019 2_4:+6390198 Msa0311540:CDS
GTGAAAGGTGGCTCACCATA+TGG 0.504157 2_4:+6391014 Msa0311540:CDS
ACAGCCCACTGAATTAGAAC+TGG 0.505688 2_4:+6391067 Msa0311540:CDS
GCACCAAATGTGTATCCAAC+GGG 0.505966 2_4:-6390969 None:intergenic
ATGTCTGGAACTTCACTCCT+TGG 0.507106 2_4:-6396115 None:intergenic
GTTGGATACACATTTGGTGC+TGG 0.509879 2_4:+6390972 Msa0311540:CDS
AGCTGTTTAGGTGAAATGTC+TGG 0.522083 2_4:-6396130 None:intergenic
GTGAAGGGTGGATCACCATA+TGG 0.524280 2_4:+6397821 Msa0311540:CDS
ATTGGAACATCACTCTTTGG+AGG 0.524679 2_4:-6390165 None:intergenic
ATTCTATGTATGGACATGTT+GGG 0.527530 2_4:+6389916 Msa0311540:CDS
GTGCTGTAAAAGATGCCAGC+AGG 0.530472 2_4:-6390327 None:intergenic
CTTCAAGTTACTAGCAGCAA+TGG 0.533135 2_4:+6389761 Msa0311540:CDS
CAACATGTCCGTACACAGAA+TGG 0.533687 2_4:-6395737 None:intergenic
TCTGGAACTTCACTCCTTGG+AGG 0.536604 2_4:-6396112 None:intergenic
GCTGGAACTTATGCAGGGGA+TGG 0.539914 2_4:+6391038 Msa0311540:CDS
GGTGGCTCACCATATGGTGC+TGG 0.541107 2_4:+6391020 Msa0311540:CDS
GAATTGCAAAGAAGCTCAAA+GGG 0.547992 2_4:+6391123 Msa0311540:CDS
AAACTTGCAGGAAAGCCTGC+TGG 0.549934 2_4:+6390312 Msa0311540:CDS
AGTAGAAGCAAAACTCTGGC+AGG 0.554251 2_4:+6395806 Msa0311540:CDS
TGTAGAAGCAAAACTCTGGC+AGG 0.555434 2_4:+6389983 Msa0311540:CDS
TTCAGCAAATGAGCTTCTTG+AGG 0.559049 2_4:+6390191 Msa0311540:CDS
TGGATACAACTGGAGACCTA+TGG 0.560259 2_4:+6390280 Msa0311540:CDS
TTGAGCCAGTTCTAATTCAG+TGG 0.564705 2_4:-6391072 None:intergenic
GGAATTGCAAAGAAGCTCAA+AGG 0.567048 2_4:+6391122 Msa0311540:CDS
AAGGAGTAGAAGCAAAACTC+TGG 0.567226 2_4:+6395802 Msa0311540:CDS
GAGATGGAAAAGGTGAAGGG+TGG 0.571043 2_4:+6397809 Msa0311540:CDS
AAACAGCTTGCTGAAGCTGA+TGG 0.579655 2_4:+6396145 Msa0311540:CDS
TGGAATGTTTGAGATAGAAA+AGG 0.585194 2_4:+6390992 Msa0311540:CDS
TATTGTCTGAAGAAATCCTA+AGG 0.587507 2_4:+6396077 Msa0311540:CDS
GCCTGAAATATTGCCAGAAG+AGG 0.587723 2_4:+6390122 Msa0311540:CDS
TGAGCCAGTTCTAATTCAGT+GGG 0.588214 2_4:-6391071 None:intergenic
TGAGCCAATTCTAACTCACT+AGG 0.588519 2_4:-6397878 None:intergenic
TACAGCACTGCTTGTCAAGG+AGG 0.588851 2_4:+6390342 Msa0311540:CDS
TGGTGCTGGAATGTTTGAGA+TGG 0.592919 2_4:+6397793 Msa0311540:CDS
GTTTGAGATGGAAAAGGTGA+AGG 0.593131 2_4:+6397805 Msa0311540:CDS
AGCACCAAATGTGTATCCAA+CGG 0.594733 2_4:-6390970 None:intergenic
TGGAATGTTTGAGATGGAAA+AGG 0.598335 2_4:+6397799 Msa0311540:CDS
GGAAGATGAAAGCACCTCCA+AGG 0.601210 2_4:+6396098 Msa0311540:CDS
AGCACTGCTTGTCAAGGAGG+TGG 0.606846 2_4:+6390345 Msa0311540:CDS
TTTGAGATAGAAAAGGTGAA+AGG 0.612381 2_4:+6390999 Msa0311540:CDS
GGAATTGCAAAGAAGCTCAA+AGG 0.612793 2_4:+6397929 Msa0311540:CDS
AAGGTGTAGAAGCAAAACTC+TGG 0.618036 2_4:+6389979 Msa0311540:CDS
TGTCTCTATAGAAACCAAAA+GGG 0.625559 2_4:-6389716 None:intergenic
ATGGTGCTGGAACTTATGCA+GGG 0.634036 2_4:+6391033 Msa0311540:CDS
ATTACACAACTTGTTCACCA+TGG 0.638391 2_4:+6390933 Msa0311540:CDS
AGCTGAAGAGATTCTAAAGG+GGG 0.639484 2_4:+6395767 Msa0311540:CDS
ATTACTCAGCTTGTTCACCA+TGG 0.640802 2_4:+6397740 Msa0311540:intron
GAGATAGAAAAGGTGAAAGG+TGG 0.645866 2_4:+6391002 Msa0311540:CDS
TAGCTGAAGAGATTCTAAAG+GGG 0.681515 2_4:+6395766 Msa0311540:CDS
TTTGAGATGGAAAAGGTGAA+GGG 0.701314 2_4:+6397806 Msa0311540:CDS
TGGTGCTGGAACTTATGCAG+GGG 0.770860 2_4:+6391034 Msa0311540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTATATACTATATGTAT+AGG + chr2_4:6390098-6390117 Msa0311540:intron 10.0%
!!! TTTTAGAATTCAATAATAAT+TGG + chr2_4:6390445-6390464 Msa0311540:intron 10.0%
!!! TAAATTAACTATTTTCAATT+TGG + chr2_4:6390631-6390650 Msa0311540:intron 10.0%
!!! TCAAAAAATTTAAGTTTTTT+AGG - chr2_4:6393097-6393116 None:intergenic 10.0%
!!! TAATCACTTAAATATTTTAT+TGG + chr2_4:6394963-6394982 Msa0311540:intron 10.0%
!!! ATCTTTTTTTTTTTTTTGTA+AGG + chr2_4:6395025-6395044 Msa0311540:intron 10.0%
!! ATATACATAAATATAAACTA+AGG - chr2_4:6395192-6395211 None:intergenic 10.0%
!! ATTATAATATATATCATTAG+TGG - chr2_4:6396035-6396054 None:intergenic 10.0%
!! TATTGAGAAAAAAAAAATAA+AGG + chr2_4:6396629-6396648 Msa0311540:intron 10.0%
!!! AAATTAGATCATTTTTTTTT+TGG + chr2_4:6396975-6396994 Msa0311540:intron 10.0%
!!! GATATATTTTTTTTTTTTGT+CGG - chr2_4:6397095-6397114 None:intergenic 10.0%
!!! ATATAAATTTATTCTAAAAG+AGG + chr2_4:6397488-6397507 Msa0311540:intron 10.0%
!!! TATAAATTTATTCTAAAAGA+GGG + chr2_4:6397489-6397508 Msa0311540:intron 10.0%
!! CAAAAAATTAACATATTTAT+AGG + chr2_4:6397579-6397598 Msa0311540:intron 10.0%
!!! TATTGAATTCTAAAAACATT+TGG - chr2_4:6390440-6390459 None:intergenic 15.0%
!! TTGTAAAATCAGAAAATAAA+TGG - chr2_4:6390892-6390911 None:intergenic 15.0%
!!! AATATTTAGAATATGTTAAG+TGG - chr2_4:6391186-6391205 None:intergenic 15.0%
!!! TTTTAAACTTTCATTATCAA+AGG + chr2_4:6391353-6391372 Msa0311540:intron 15.0%
!! TTTAAACTTTCATTATCAAA+GGG + chr2_4:6391354-6391373 Msa0311540:intron 15.0%
!!! ATTTTTTATTTTTTTTGGGT+GGG - chr2_4:6392383-6392402 None:intergenic 15.0%
!!! AATTTTTTATTTTTTTTGGG+TGG - chr2_4:6392384-6392403 None:intergenic 15.0%
!! ATTCATTATTTATGTTATTC+TGG - chr2_4:6393384-6393403 None:intergenic 15.0%
!!! AACATAAATAATGAATCTTT+TGG + chr2_4:6393388-6393407 Msa0311540:intron 15.0%
!!! ACATAAATAATGAATCTTTT+GGG + chr2_4:6393389-6393408 Msa0311540:intron 15.0%
!! AGATTTACAAAAAAAAAGTT+TGG - chr2_4:6393561-6393580 None:intergenic 15.0%
!!! TTTTTTTTTGTAAATCTAGA+AGG + chr2_4:6393564-6393583 Msa0311540:intron 15.0%
!! ATGCTTATTTATTTATATAG+AGG + chr2_4:6394896-6394915 Msa0311540:intron 15.0%
!! AAAGATGTATGTTAAATAAA+TGG - chr2_4:6395011-6395030 None:intergenic 15.0%
!! ATTTAACATACATCTTATAA+AGG + chr2_4:6395048-6395067 Msa0311540:intron 15.0%
!! TTTAACATACATCTTATAAA+GGG + chr2_4:6395049-6395068 Msa0311540:intron 15.0%
!! AACAAAACAATAATAATGTT+AGG + chr2_4:6395213-6395232 Msa0311540:intron 15.0%
!!! TTTTTTTTTACTGTTTTTGT+TGG + chr2_4:6395496-6395515 Msa0311540:intron 15.0%
!! AAGTATAAATGAATTACAAT+TGG + chr2_4:6395894-6395913 Msa0311540:intron 15.0%
!!! ATTTTTACTATACACTAAAA+TGG - chr2_4:6396705-6396724 None:intergenic 15.0%
!! TGTATAGTAAAAATAGTAAA+AGG + chr2_4:6396711-6396730 Msa0311540:intron 15.0%
!! ACATTAAATATAACTTCTGA+AGG - chr2_4:6389858-6389877 None:intergenic 20.0%
!! TTTCAAAAAATAAAGTGTGA+TGG - chr2_4:6390409-6390428 None:intergenic 20.0%
!! CATAAATTTACTAACAAAAG+AGG - chr2_4:6390567-6390586 None:intergenic 20.0%
!! GAAATGATAGAAATACATTA+TGG + chr2_4:6391561-6391580 Msa0311540:intron 20.0%
!! TTTCGTTATTAAAATGTTAC+CGG + chr2_4:6391868-6391887 Msa0311540:intron 20.0%
!!! TTTTTAAGAATGTTCTCTTT+TGG + chr2_4:6392016-6392035 Msa0311540:intron 20.0%
!!! AATTATTTAACTATTGGTCT+CGG + chr2_4:6392293-6392312 Msa0311540:intron 20.0%
!!! TGCTAAAATTTTATACTGTT+AGG - chr2_4:6392425-6392444 None:intergenic 20.0%
!!! TTTTTGCTTATATTAATGAC+CGG - chr2_4:6392518-6392537 None:intergenic 20.0%
!!! TATTTTTGGAATTTTTTGCA+AGG - chr2_4:6392862-6392881 None:intergenic 20.0%
!!! TTTTTGAAGAAATGTAAGAA+AGG + chr2_4:6393110-6393129 Msa0311540:intron 20.0%
!! AAAATGAACCATATTTATAG+GGG - chr2_4:6394111-6394130 None:intergenic 20.0%
!! GAAAATGAACCATATTTATA+GGG - chr2_4:6394112-6394131 None:intergenic 20.0%
!! AGAAAATGAACCATATTTAT+AGG - chr2_4:6394113-6394132 None:intergenic 20.0%
!! ATAGGATTAGAAATAGATTT+AGG + chr2_4:6394468-6394487 Msa0311540:intron 20.0%
!! GGGTAAAATTGAAAAAAATA+GGG + chr2_4:6394733-6394752 Msa0311540:intron 20.0%
!! TTTATTCAATCATTCAATCT+TGG + chr2_4:6395075-6395094 Msa0311540:intron 20.0%
!! AATAATGTTAGGTTAAAGAA+TGG + chr2_4:6395224-6395243 Msa0311540:intron 20.0%
!! TAAATTTCATATGAGGATAT+AGG - chr2_4:6395700-6395719 None:intergenic 20.0%
!! TAATCTGAATGAAAATGAAA+AGG - chr2_4:6395838-6395857 None:intergenic 20.0%
!! TGGGAAAAATAAGATTATTA+CGG - chr2_4:6396776-6396795 None:intergenic 20.0%
!!! TCTTTTTAAAAAAAAAGGGT+GGG - chr2_4:6396915-6396934 None:intergenic 20.0%
!!! TTCTTTTTAAAAAAAAAGGG+TGG - chr2_4:6396916-6396935 None:intergenic 20.0%
!!! AATTGAAGATGAAAAACTTT+TGG + chr2_4:6397517-6397536 Msa0311540:intron 20.0%
!! TAAATTCTACAAGGAAAAAA+GGG - chr2_4:6397624-6397643 None:intergenic 20.0%
!! TTAAATATAACTTCTGAAGG+AGG - chr2_4:6389855-6389874 None:intergenic 25.0%
! TTTAGCTACTATTCTATGTA+TGG + chr2_4:6389906-6389925 Msa0311540:intron 25.0%
!! TACTCAATTCAAAGCATTTA+TGG + chr2_4:6390260-6390279 Msa0311540:CDS 25.0%
! ATGAATCGATTAAATGTATG+AGG + chr2_4:6390489-6390508 Msa0311540:intron 25.0%
! GATACATTTATGTACTATAG+TGG - chr2_4:6390520-6390539 None:intergenic 25.0%
!!! CTGATTCAATTTTTTCTAGA+GGG - chr2_4:6391239-6391258 None:intergenic 25.0%
!!! ACTGATTCAATTTTTTCTAG+AGG - chr2_4:6391240-6391259 None:intergenic 25.0%
!!! AAATAACTTATGGTCTTGTA+AGG - chr2_4:6391263-6391282 None:intergenic 25.0%
! GGATGACAATAAATAACTTA+TGG - chr2_4:6391273-6391292 None:intergenic 25.0%
! ACTAACATAACTGAATGATA+GGG - chr2_4:6391294-6391313 None:intergenic 25.0%
! AACTAACATAACTGAATGAT+AGG - chr2_4:6391295-6391314 None:intergenic 25.0%
! GGTTAACACAAAAAAAAAGT+AGG + chr2_4:6391532-6391551 Msa0311540:intron 25.0%
!! TTTGCTTATATTCGTTTTGT+TGG - chr2_4:6391790-6391809 None:intergenic 25.0%
!!! TCTTTTTGACTTGTACATAA+TGG - chr2_4:6391908-6391927 None:intergenic 25.0%
! ATTCTGAATCTATCCTTAAA+AGG + chr2_4:6391972-6391991 Msa0311540:intron 25.0%
!!! CTAAGAATTGATTCCTTTTA+AGG - chr2_4:6391988-6392007 None:intergenic 25.0%
!! ATTATTTAACTATTGGTCTC+GGG + chr2_4:6392294-6392313 Msa0311540:intron 25.0%
! AATTAATGACAAACATGATC+AGG + chr2_4:6392482-6392501 Msa0311540:intron 25.0%
! ATTAATGACAAACATGATCA+GGG + chr2_4:6392483-6392502 Msa0311540:intron 25.0%
! CATTCGTTTAATTATGTATG+TGG - chr2_4:6392592-6392611 None:intergenic 25.0%
!! TTTTTGCTTATATTAGTGAC+CGG + chr2_4:6392617-6392636 Msa0311540:intron 25.0%
! AAATAAAGATCTACATCTTC+CGG - chr2_4:6392639-6392658 None:intergenic 25.0%
!!! AACAAGATTGTTAGTTTTTC+CGG + chr2_4:6392907-6392926 Msa0311540:intron 25.0%
!!! AAGTTTTTTAGGTAGCTTTT+GGG - chr2_4:6393086-6393105 None:intergenic 25.0%
!!! TAAGTTTTTTAGGTAGCTTT+TGG - chr2_4:6393087-6393106 None:intergenic 25.0%
!!! ACTTGTTTTAGGCTATAAAA+AGG - chr2_4:6393174-6393193 None:intergenic 25.0%
!!! AATTACCTAGTACTTGTTTT+AGG - chr2_4:6393185-6393204 None:intergenic 25.0%
!!! TTTTAAAGCGTTTTTTTGGA+CGG - chr2_4:6393242-6393261 None:intergenic 25.0%
!!! TGAGTTTTAAAGCGTTTTTT+TGG - chr2_4:6393246-6393265 None:intergenic 25.0%
! ACATTTCGGATTATATAATC+CGG - chr2_4:6393326-6393345 None:intergenic 25.0%
!!! AAATAATGAATCTTTTGGGA+AGG + chr2_4:6393393-6393412 Msa0311540:intron 25.0%
! TATAGCTTATGTAATAGGAT+AGG + chr2_4:6394450-6394469 Msa0311540:intron 25.0%
! GATTTATTTGCAGATATATC+CGG - chr2_4:6394691-6394710 None:intergenic 25.0%
! GATATATCTGCAAATAAATC+CGG + chr2_4:6394691-6394710 Msa0311540:intron 25.0%
! GGGGTAAAATTGAAAAAAAT+AGG + chr2_4:6394732-6394751 Msa0311540:intron 25.0%
!! CTGATGGAATAAATTTTTGA+TGG + chr2_4:6395135-6395154 Msa0311540:intron 25.0%
!!! AACTAAGGTAGTTTTGTTTA+AGG - chr2_4:6395177-6395196 None:intergenic 25.0%
!! CAATTCCTTTTCTATAAAGA+CGG + chr2_4:6395313-6395332 Msa0311540:intron 25.0%
!! AATTCCTTTTCTATAAAGAC+GGG + chr2_4:6395314-6395333 Msa0311540:intron 25.0%
! TTACATGATGTAAACTTTAG+TGG - chr2_4:6395370-6395389 None:intergenic 25.0%
!! ATTTTTACGCGTTTTATGTT+TGG + chr2_4:6395459-6395478 Msa0311540:intron 25.0%
! CAAAGATAAGCTTAATTTCT+CGG + chr2_4:6395616-6395635 Msa0311540:intron 25.0%
! TGCAAAGTAAATTTCATATG+AGG - chr2_4:6395707-6395726 None:intergenic 25.0%
!! TTAGTGCTTGTTTAGTATTT+TGG + chr2_4:6395926-6395945 Msa0311540:intron 25.0%
! ATTTCTTCAGACAATATTTC+TGG - chr2_4:6396073-6396092 None:intergenic 25.0%
!!! AAAGTATTTTTTGATGCAAC+TGG + chr2_4:6396217-6396236 Msa0311540:intron 25.0%
! TAGAAATTAGAAAGATGAGA+AGG - chr2_4:6396346-6396365 None:intergenic 25.0%
! AACCTATATGTTTATCTTAC+AGG + chr2_4:6396541-6396560 Msa0311540:intron 25.0%
! AACCTGTAAGATAAACATAT+AGG - chr2_4:6396546-6396565 None:intergenic 25.0%
! TATATGTTTATCTTACAGGT+TGG + chr2_4:6396545-6396564 Msa0311540:intron 25.0%
! TTTACTATACACTAAAATGG+CGG - chr2_4:6396702-6396721 None:intergenic 25.0%
! GGGAAAAATAAGATTATTAC+GGG - chr2_4:6396775-6396794 None:intergenic 25.0%
!!! CTTTTTAAAAAAAAAGGGTG+GGG - chr2_4:6396914-6396933 None:intergenic 25.0%
! TTTATAAAGAGACTTAGTTG+TGG - chr2_4:6397058-6397077 None:intergenic 25.0%
! TAAACTAACTAACAAACTTC+CGG + chr2_4:6397180-6397199 Msa0311540:intron 25.0%
! AAATTCTACAAGGAAAAAAG+GGG - chr2_4:6397623-6397642 None:intergenic 25.0%
! CTAAATTCTACAAGGAAAAA+AGG - chr2_4:6397625-6397644 None:intergenic 25.0%
!!! CTTTTTTCCTTGTAGAATTT+AGG + chr2_4:6397623-6397642 Msa0311540:intron 25.0%
!!! CTATGGTTTTTCAAATTTTC+AGG + chr2_4:6397708-6397727 Msa0311540:intron 25.0%
TGTCTCTATAGAAACCAAAA+GGG - chr2_4:6389719-6389738 None:intergenic 30.0%
TATTCTATGTATGGACATGT+TGG + chr2_4:6389915-6389934 Msa0311540:CDS 30.0%
ATTCTATGTATGGACATGTT+GGG + chr2_4:6389916-6389935 Msa0311540:CDS 30.0%
ATAATTGGAACATCACTCTT+TGG - chr2_4:6390171-6390190 None:intergenic 30.0%
! AGCTCATTTGCTGAAATAAT+TGG - chr2_4:6390186-6390205 None:intergenic 30.0%
!!! TTTGGTTTTCCAACAAGATT+TGG + chr2_4:6390228-6390247 Msa0311540:intron 30.0%
! AAAGCATTTATGGATACAAC+TGG + chr2_4:6390270-6390289 Msa0311540:CDS 30.0%
GATTCATTTCTAATTGATGC+GGG - chr2_4:6390476-6390495 None:intergenic 30.0%
CGATTCATTTCTAATTGATG+CGG - chr2_4:6390477-6390496 None:intergenic 30.0%
!! TACTAACAAAAGAGGTACTA+GGG - chr2_4:6390559-6390578 None:intergenic 30.0%
!! TTACTAACAAAAGAGGTACT+AGG - chr2_4:6390560-6390579 None:intergenic 30.0%
GTGTTCAAAAGTTTAAGCAT+TGG - chr2_4:6390601-6390620 None:intergenic 30.0%
! TGGAATGTTTGAGATAGAAA+AGG + chr2_4:6390992-6391011 Msa0311540:CDS 30.0%
! TTTGAGATAGAAAAGGTGAA+AGG + chr2_4:6390999-6391018 Msa0311540:CDS 30.0%
! TCAGTTATGTTAGTTTATCC+TGG + chr2_4:6391300-6391319 Msa0311540:intron 30.0%
!!! TTTTTTTGTGTTAACCCTCT+GGG - chr2_4:6391528-6391547 None:intergenic 30.0%
!!! TTTTTTTTGTGTTAACCCTC+TGG - chr2_4:6391529-6391548 None:intergenic 30.0%
TGGTAAATGCATCTGATTTA+GGG - chr2_4:6391636-6391655 None:intergenic 30.0%
ATGGTAAATGCATCTGATTT+AGG - chr2_4:6391637-6391656 None:intergenic 30.0%
AAGAAGAAGAAGAAGAAGAA+TGG - chr2_4:6391656-6391675 None:intergenic 30.0%
AAGAGAAGAAGAATAAGTTG+AGG - chr2_4:6391696-6391715 None:intergenic 30.0%
GAAACACTTTGTAAACACAT+TGG - chr2_4:6391949-6391968 None:intergenic 30.0%
AAGAGATTTATGAGGAACTT+GGG - chr2_4:6392055-6392074 None:intergenic 30.0%
!! AAGATGTGACTTTTGAGAAA+GGG - chr2_4:6392138-6392157 None:intergenic 30.0%
!! AAAGATGTGACTTTTGAGAA+AGG - chr2_4:6392139-6392158 None:intergenic 30.0%
GTAGAAAAATGCGAATCTTT+GGG - chr2_4:6392167-6392186 None:intergenic 30.0%
GCTAAAAGTTAAAGGTCTTT+GGG - chr2_4:6392203-6392222 None:intergenic 30.0%
AAACCAAAGAGACGATATTT+AGG - chr2_4:6392233-6392252 None:intergenic 30.0%
GTGTGTGTGTCAAATATTTA+AGG - chr2_4:6392336-6392355 None:intergenic 30.0%
!!! TTTATTTTTTTTGGGTGGGT+GGG - chr2_4:6392379-6392398 None:intergenic 30.0%
!!! TTTTATTTTTTTTGGGTGGG+TGG - chr2_4:6392380-6392399 None:intergenic 30.0%
! ATTTTATACTGTTAGGTGCT+AGG - chr2_4:6392418-6392437 None:intergenic 30.0%
! AAGACAAATTAGCTTAGTCA+CGG + chr2_4:6392700-6392719 Msa0311540:intron 30.0%
TTTGATCCAACTTCTTGTAT+AGG + chr2_4:6392770-6392789 Msa0311540:intron 30.0%
TGTATAGGTACATGTACATA+TGG + chr2_4:6392785-6392804 Msa0311540:intron 30.0%
AAAAATTCCAAAAATACCCC+TGG + chr2_4:6392866-6392885 Msa0311540:intron 30.0%
CTTGTTCGAAAAATGTAATC+CGG - chr2_4:6392893-6392912 None:intergenic 30.0%
! TTTTTCCGGAACATAAATTC+CGG + chr2_4:6392921-6392940 Msa0311540:intron 30.0%
ACATAAATTCCGGACAAATA+CGG + chr2_4:6392931-6392950 Msa0311540:intron 30.0%
ATATGAATACCGTATTTGTC+CGG - chr2_4:6392943-6392962 None:intergenic 30.0%
! TTTTAGGCTATAAAAAGGCT+TGG - chr2_4:6393169-6393188 None:intergenic 30.0%
TATAGCCTAAAACAAGTACT+AGG + chr2_4:6393177-6393196 Msa0311540:intron 30.0%
TCTTATGAACTTGATCATGT+CGG - chr2_4:6393486-6393505 None:intergenic 30.0%
ATTGCATTGTTCATAAGAAG+AGG - chr2_4:6393510-6393529 None:intergenic 30.0%
! AAATTTTTGTCATCAAGCTC+AGG - chr2_4:6393683-6393702 None:intergenic 30.0%
! CTTGATGACAAAAATTTGCA+TGG + chr2_4:6393686-6393705 Msa0311540:intron 30.0%
!! AAAATTTGCATGGTTTGCTT+TGG + chr2_4:6393696-6393715 Msa0311540:intron 30.0%
! CATTGCACTAAGATTTTATG+TGG - chr2_4:6393799-6393818 None:intergenic 30.0%
CATAAAATCTTAGTGCAATG+TGG + chr2_4:6393799-6393818 Msa0311540:intron 30.0%
!!! GTAAAAACACGTTTTTTGAC+CGG + chr2_4:6394050-6394069 Msa0311540:intron 30.0%
TATTACATAAGCTATACCAG+TGG - chr2_4:6394446-6394465 None:intergenic 30.0%
ACTGGTATAGCTTATGTAAT+AGG + chr2_4:6394445-6394464 Msa0311540:intron 30.0%
GTTCTAATAAAACACTGTTC+CGG + chr2_4:6394655-6394674 Msa0311540:intron 30.0%
TATATCCGGATTGTATATTC+CGG - chr2_4:6394677-6394696 None:intergenic 30.0%
TAAATCCGGAAAACATAATC+CGG + chr2_4:6394705-6394724 Msa0311540:intron 30.0%
TATTATTTGTCGTGAACTGA+TGG + chr2_4:6395119-6395138 Msa0311540:intron 30.0%
CATTGTTGCAAGAATGAATT+CGG + chr2_4:6395247-6395266 Msa0311540:intron 30.0%
CGTCTTTATAGAAAAGGAAT+TGG - chr2_4:6395315-6395334 None:intergenic 30.0%
! ATTCCTTTTCTATAAAGACG+GGG + chr2_4:6395315-6395334 Msa0311540:intron 30.0%
!! CTTATCTTTGGTTCTATGTT+TGG - chr2_4:6395606-6395625 None:intergenic 30.0%
CGAGAAATTAAGCTTATCTT+TGG - chr2_4:6395618-6395637 None:intergenic 30.0%
TTTAGTTACCATTCTGTGTA+CGG + chr2_4:6395729-6395748 Msa0311540:intron 30.0%
TATTGTCTGAAGAAATCCTA+AGG + chr2_4:6396077-6396096 Msa0311540:CDS 30.0%
GTATTACATATTATACGCAG+AGG - chr2_4:6396464-6396483 None:intergenic 30.0%
!! TATCTTACAGGTTGGTATTA+AGG + chr2_4:6396553-6396572 Msa0311540:intron 30.0%
! TATTTTTCCCACTTAGTGTA+TGG + chr2_4:6396785-6396804 Msa0311540:intron 30.0%
!!! CTTTTTTCCATACACTAAGT+GGG - chr2_4:6396795-6396814 None:intergenic 30.0%
!!! TCTTTTTTCCATACACTAAG+TGG - chr2_4:6396796-6396815 None:intergenic 30.0%
ACAAATAAATCCACTTACCA+TGG + chr2_4:6396849-6396868 Msa0311540:intron 30.0%
TCTGTTAACTATACAGAGTA+CGG + chr2_4:6397213-6397232 Msa0311540:intron 30.0%
! TGAAGATGAAAAACTTTTGG+AGG + chr2_4:6397520-6397539 Msa0311540:intron 30.0%
! AAAGGGGGTAAATATGTTTT+TGG - chr2_4:6397607-6397626 None:intergenic 30.0%
AATTCTACAAGGAAAAAAGG+GGG - chr2_4:6397622-6397641 None:intergenic 30.0%
! CTTTTAGTAAGTATATCCGA+TGG - chr2_4:6397658-6397677 None:intergenic 30.0%
CAAAGTAACTGTTTGTTCTA+TGG + chr2_4:6397691-6397710 Msa0311540:intron 30.0%
TAGGTACAAAAATCATACCA+TGG - chr2_4:6397760-6397779 None:intergenic 30.0%
! GGTATGATTTTTGTACCTAT+TGG + chr2_4:6397761-6397780 Msa0311540:CDS 30.0%
CTGTCTCTATAGAAACCAAA+AGG - chr2_4:6389720-6389739 None:intergenic 35.0%
AGATTCGTGAAAATAGAGAG+AGG - chr2_4:6389821-6389840 None:intergenic 35.0%
CTAGCTGAAGAGATCAAAAA+TGG + chr2_4:6389942-6389961 Msa0311540:CDS 35.0%
AATGGAGTTGAATCCATAGA+AGG + chr2_4:6389960-6389979 Msa0311540:CDS 35.0%
! TTTTGCTTCTACACCTTCTA+TGG - chr2_4:6389976-6389995 None:intergenic 35.0%
!! TGTTTGAGAAGTGTTCAGTT+TGG - chr2_4:6390027-6390046 None:intergenic 35.0%
! TCCAACAAGATTTGGAATGA+TGG + chr2_4:6390236-6390255 Msa0311540:intron 35.0%
ACAGAAGAATGAGAAACTCA+CGG - chr2_4:6390384-6390403 None:intergenic 35.0%
TAACAGCGTCTCATACATTT+AGG + chr2_4:6390663-6390682 Msa0311540:intron 35.0%
AACAGCGTCTCATACATTTA+GGG + chr2_4:6390664-6390683 Msa0311540:intron 35.0%
! CTAAGGTTTTTCTTACACTC+TGG + chr2_4:6390794-6390813 Msa0311540:intron 35.0%
! TGATTTTACAATGTACCTGC+AGG + chr2_4:6390901-6390920 Msa0311540:intron 35.0%
! ATTACACAACTTGTTCACCA+TGG + chr2_4:6390933-6390952 Msa0311540:CDS 35.0%
TCATCAAGGGAAATACTTTG+CGG + chr2_4:6391100-6391119 Msa0311540:CDS 35.0%
GAATTGCAAAGAAGCTCAAA+GGG + chr2_4:6391123-6391142 Msa0311540:CDS 35.0%
AACAAGTGATTTGACTCAAG+TGG + chr2_4:6391388-6391407 Msa0311540:intron 35.0%
CATCATACTGACGAATCATT+CGG + chr2_4:6391422-6391441 Msa0311540:intron 35.0%
AAAAGGAGACCCTGTTAATA+TGG - chr2_4:6391498-6391517 None:intergenic 35.0%
GGTAAATGCATCTGATTTAG+GGG - chr2_4:6391635-6391654 None:intergenic 35.0%
GAAGAGATTTATGAGGAACT+TGG - chr2_4:6392056-6392075 None:intergenic 35.0%
GAGAGAAGAAGAGATTTATG+AGG - chr2_4:6392063-6392082 None:intergenic 35.0%
GGTAGAAAAATGCGAATCTT+TGG - chr2_4:6392168-6392187 None:intergenic 35.0%
!!! GTCTTTGGGTAAGTTTTGAA+AGG - chr2_4:6392189-6392208 None:intergenic 35.0%
GGCTAAAAGTTAAAGGTCTT+TGG - chr2_4:6392204-6392223 None:intergenic 35.0%
GACACTAGGCTAAAAGTTAA+AGG - chr2_4:6392211-6392230 None:intergenic 35.0%
TGTCCTAAATATCGTCTCTT+TGG + chr2_4:6392227-6392246 Msa0311540:intron 35.0%
TGCTTATATTAATGACCGGA+GGG - chr2_4:6392514-6392533 None:intergenic 35.0%
TTGCTTATATTAATGACCGG+AGG - chr2_4:6392515-6392534 None:intergenic 35.0%
CATGTACCTATACAAGAAGT+TGG - chr2_4:6392779-6392798 None:intergenic 35.0%
TTTGTCCGGAATTTATGTTC+CGG - chr2_4:6392929-6392948 None:intergenic 35.0%
TGTGTCTTTCTTTGATGTCA+AGG + chr2_4:6392965-6392984 Msa0311540:intron 35.0%
GTGTCTTTCTTTGATGTCAA+GGG + chr2_4:6392966-6392985 Msa0311540:intron 35.0%
AATGCAATTGTAGGGTTCAT+AGG + chr2_4:6393026-6393045 Msa0311540:intron 35.0%
AATTGTAGGGTTCATAGGAA+CGG + chr2_4:6393031-6393050 Msa0311540:intron 35.0%
AAGGATGTGAAGAAGAATGA+AGG + chr2_4:6393129-6393148 Msa0311540:intron 35.0%
!! CGCTTTAAAACTCAACTAAC+CGG + chr2_4:6393252-6393271 Msa0311540:intron 35.0%
CGGAAATACTGCATACATTT+CGG - chr2_4:6393340-6393359 None:intergenic 35.0%
CGAAATGTATGCAGTATTTC+CGG + chr2_4:6393338-6393357 Msa0311540:intron 35.0%
!! TATGTTATTCTGGTGCCATT+CGG - chr2_4:6393374-6393393 None:intergenic 35.0%
!! TAATGAATCTTTTGGGAAGG+TGG + chr2_4:6393396-6393415 Msa0311540:intron 35.0%
!! ATATTTTTGACAGCATGCTC+AGG + chr2_4:6393596-6393615 Msa0311540:intron 35.0%
! TGAGTTAGCTCTCTATTTGA+CGG - chr2_4:6393634-6393653 None:intergenic 35.0%
! CTGGTATTGAAGATCAAAAC+CGG + chr2_4:6393736-6393755 Msa0311540:intron 35.0%
! CAGCATAGGATTCTTTTGTA+TGG - chr2_4:6393826-6393845 None:intergenic 35.0%
!! TTGGTTCGGATTGTATAATC+CGG - chr2_4:6393856-6393875 None:intergenic 35.0%
TTCCGGAAAAAGACGATAAT+GGG - chr2_4:6393920-6393939 None:intergenic 35.0%
ATTCCGGAAAAAGACGATAA+TGG - chr2_4:6393921-6393940 None:intergenic 35.0%
! TTTTTCCGGAATACGTTATC+CGG + chr2_4:6393929-6393948 Msa0311540:intron 35.0%
GTTATCCGGATTATATCTTC+CGG + chr2_4:6393961-6393980 Msa0311540:intron 35.0%
!! CACAAAGAAAACGTTTTGGA+CGG + chr2_4:6394018-6394037 Msa0311540:intron 35.0%
TGAACCATATTTATAGGGGA+GGG - chr2_4:6394107-6394126 None:intergenic 35.0%
ATGAACCATATTTATAGGGG+AGG - chr2_4:6394108-6394127 None:intergenic 35.0%
ATGGAAACACATCATTGTAG+AGG - chr2_4:6394174-6394193 None:intergenic 35.0%
AAGAAGAAAATCTGTTGGTG+GGG - chr2_4:6394359-6394378 None:intergenic 35.0%
GAAGAAGAAAATCTGTTGGT+GGG - chr2_4:6394360-6394379 None:intergenic 35.0%
TGAAGAAGAAAATCTGTTGG+TGG - chr2_4:6394361-6394380 None:intergenic 35.0%
! TTTCAATTTTACCCCTTGTC+CGG - chr2_4:6394727-6394746 None:intergenic 35.0%
GAGCAAGCAAATTACATCAA+TGG + chr2_4:6395344-6395363 Msa0311540:intron 35.0%
!!! CTTACTGTCTAACTGGTTTT+TGG + chr2_4:6395409-6395428 Msa0311540:intron 35.0%
CTAGCTGAAGAGATTCTAAA+GGG + chr2_4:6395765-6395784 Msa0311540:CDS 35.0%
! TAGCTGAAGAGATTCTAAAG+GGG + chr2_4:6395766-6395785 Msa0311540:CDS 35.0%
! CGTTGACATTGACATTGATT+TGG - chr2_4:6395961-6395980 None:intergenic 35.0%
GTGCATATTTGATATCAGAG+TGG - chr2_4:6396007-6396026 None:intergenic 35.0%
!!! GAAGCTGATGGTTTTTTGTT+TGG + chr2_4:6396157-6396176 Msa0311540:CDS 35.0%
!!! TTTGGTTTTCCAGCAAGATA+TGG + chr2_4:6396175-6396194 Msa0311540:CDS 35.0%
TTGATGCAACTGGAAGTTTA+TGG + chr2_4:6396227-6396246 Msa0311540:intron 35.0%
! TTTTGTCAAGTATAGCCTAG+TGG + chr2_4:6396381-6396400 Msa0311540:intron 35.0%
! ATGTGAAGAAGTGAAGTATC+TGG + chr2_4:6396424-6396443 Msa0311540:intron 35.0%
! TGTGAAGAAGTGAAGTATCT+GGG + chr2_4:6396425-6396444 Msa0311540:intron 35.0%
TACATATTATACGCAGAGGT+CGG - chr2_4:6396460-6396479 None:intergenic 35.0%
! TGAGTTTAACTCAGTTGGTA+GGG - chr2_4:6396488-6396507 None:intergenic 35.0%
CAAGTTCTCATCTCTATGTT+TGG - chr2_4:6396516-6396535 None:intergenic 35.0%
TTTCTTGGACTCTACGTATA+CGG - chr2_4:6396675-6396694 None:intergenic 35.0%
! ATTACGGGTTTGAGATAATG+TGG - chr2_4:6396760-6396779 None:intergenic 35.0%
ATTACATCTTCCATGGTAAG+TGG - chr2_4:6396862-6396881 None:intergenic 35.0%
TTACCATGGAAGATGTAATC+AGG + chr2_4:6396863-6396882 Msa0311540:intron 35.0%
TACCATGGAAGATGTAATCA+GGG + chr2_4:6396864-6396883 Msa0311540:intron 35.0%
TAAAGAGACTTAGTTGTGGT+AGG - chr2_4:6397054-6397073 None:intergenic 35.0%
TTTCCTTGTAGAATTTAGGC+TGG + chr2_4:6397627-6397646 Msa0311540:intron 35.0%
GTACCTATTGGATACACATT+TGG + chr2_4:6397773-6397792 Msa0311540:CDS 35.0%
! TGGAATGTTTGAGATGGAAA+AGG + chr2_4:6397799-6397818 Msa0311540:CDS 35.0%
! TTTGAGATGGAAAAGGTGAA+GGG + chr2_4:6397806-6397825 Msa0311540:CDS 35.0%
! CATATGGTTCAGGAACTTTT+GGG + chr2_4:6397837-6397856 Msa0311540:CDS 35.0%
! ATATGGTTCAGGAACTTTTG+GGG + chr2_4:6397838-6397857 Msa0311540:CDS 35.0%
AGAACCTAGTGAGTTAGAAT+TGG + chr2_4:6397874-6397893 Msa0311540:CDS 35.0%
! CTTCAAGTTACTAGCAGCAA+TGG + chr2_4:6389761-6389780 Msa0311540:CDS 40.0%
AAGGTGTAGAAGCAAAACTC+TGG + chr2_4:6389979-6389998 Msa0311540:CDS 40.0%
!! GAGAAGTGTTCAGTTTGGTT+TGG - chr2_4:6390022-6390041 None:intergenic 40.0%
ACCTCTTCTGGCAATATTTC+AGG - chr2_4:6390126-6390145 None:intergenic 40.0%
ATATTGCCAGAAGAGGTTCT+TGG + chr2_4:6390129-6390148 Msa0311540:CDS 40.0%
TATTGCCAGAAGAGGTTCTT+GGG + chr2_4:6390130-6390149 Msa0311540:CDS 40.0%
ATTGGAACATCACTCTTTGG+AGG - chr2_4:6390168-6390187 None:intergenic 40.0%
TTCAGCAAATGAGCTTCTTG+AGG + chr2_4:6390191-6390210 Msa0311540:CDS 40.0%
!!! GAGGCTGATGGTTTTTTGTT+TGG + chr2_4:6390210-6390229 Msa0311540:intron 40.0%
GCCATCATTCCAAATCTTGT+TGG - chr2_4:6390240-6390259 None:intergenic 40.0%
! TTTTACAGCACTGCTTGTCA+AGG + chr2_4:6390339-6390358 Msa0311540:CDS 40.0%
CTGAGAAATTGCTACTGCTA+AGG + chr2_4:6390777-6390796 Msa0311540:intron 40.0%
! ATAGCACTTGCGGAAAGTAT+GGG - chr2_4:6390824-6390843 None:intergenic 40.0%
TGTAATAGATGTCAACCTGC+AGG - chr2_4:6390919-6390938 None:intergenic 40.0%
AGCACCAAATGTGTATCCAA+CGG - chr2_4:6390973-6390992 None:intergenic 40.0%
GAGATAGAAAAGGTGAAAGG+TGG + chr2_4:6391002-6391021 Msa0311540:CDS 40.0%
! TGAGCCAGTTCTAATTCAGT+GGG - chr2_4:6391074-6391093 None:intergenic 40.0%
! TTGAGCCAGTTCTAATTCAG+TGG - chr2_4:6391075-6391094 None:intergenic 40.0%
! TGGCTCAAGCTTTTCATCAA+GGG + chr2_4:6391087-6391106 Msa0311540:CDS 40.0%
CATCAAGGGAAATACTTTGC+GGG + chr2_4:6391101-6391120 Msa0311540:CDS 40.0%
GGAATTGCAAAGAAGCTCAA+AGG + chr2_4:6391122-6391141 Msa0311540:CDS 40.0%
AATCCAACTCGATTCTTGAG+TGG + chr2_4:6391448-6391467 Msa0311540:intron 40.0%
GACCCTGTTAATATGGAGTT+CGG - chr2_4:6391491-6391510 None:intergenic 40.0%
AAAATGTTACCGGTCGTAGA+TGG + chr2_4:6391878-6391897 Msa0311540:intron 40.0%
GTCGTAAATCTCTCACCAAA+AGG + chr2_4:6392107-6392126 Msa0311540:intron 40.0%
!! ATGTGACTTTTGAGAAAGGG+TGG - chr2_4:6392135-6392154 None:intergenic 40.0%
! GAGACGATATTTAGGACACT+AGG - chr2_4:6392225-6392244 None:intergenic 40.0%
TATACTGTTAGGTGCTAGGT+AGG - chr2_4:6392414-6392433 None:intergenic 40.0%
!! GTATTACTTTTCCCACCCTA+TGG + chr2_4:6392824-6392843 Msa0311540:intron 40.0%
AAAAATGTAATCCGGACCAG+GGG - chr2_4:6392885-6392904 None:intergenic 40.0%
GAAAAATGTAATCCGGACCA+GGG - chr2_4:6392886-6392905 None:intergenic 40.0%
CTTGTGTGGGGTTCATATAA+CGG - chr2_4:6393002-6393021 None:intergenic 40.0%
AATTGCATTGCAGCTTGTGT+GGG - chr2_4:6393015-6393034 None:intergenic 40.0%
ACAAGCTGCAATGCAATTGT+AGG + chr2_4:6393017-6393036 Msa0311540:intron 40.0%
CAAGCTGCAATGCAATTGTA+GGG + chr2_4:6393018-6393037 Msa0311540:intron 40.0%
TGACGTTTCACCAAAAGGTT+TGG - chr2_4:6393278-6393297 None:intergenic 40.0%
AAGTTGTTACTGAGTGCTTC+CGG + chr2_4:6393304-6393323 Msa0311540:intron 40.0%
TCCGGATTATATAGTCCGAA+TGG + chr2_4:6393356-6393375 Msa0311540:intron 40.0%
GCCATTCGGACTATATAATC+CGG - chr2_4:6393360-6393379 None:intergenic 40.0%
ATTGAAGATCAAAACCGGAG+AGG + chr2_4:6393741-6393760 Msa0311540:intron 40.0%
TTGAAGATCAAAACCGGAGA+GGG + chr2_4:6393742-6393761 Msa0311540:intron 40.0%
CTCTATAAATACACCCTCTC+CGG - chr2_4:6393758-6393777 None:intergenic 40.0%
GGTGTATTTATAGAGGTCCT+TGG + chr2_4:6393763-6393782 Msa0311540:intron 40.0%
! ATAGAGGTCCTTGGATGTTT+TGG + chr2_4:6393772-6393791 Msa0311540:intron 40.0%
TATGTGGTCCAAAACATCCA+AGG - chr2_4:6393783-6393802 None:intergenic 40.0%
AATCCTATGCTGAAGCAATC+CGG + chr2_4:6393834-6393853 Msa0311540:intron 40.0%
AACGTCCCAAGTTTCACTTT+GGG + chr2_4:6393890-6393909 Msa0311540:intron 40.0%
! ACCCCATTATCGTCTTTTTC+CGG + chr2_4:6393915-6393934 Msa0311540:intron 40.0%
TCCGGAAAAAGACGATAATG+GGG - chr2_4:6393919-6393938 None:intergenic 40.0%
! GCACCACAAAGAAAACGTTT+TGG + chr2_4:6394014-6394033 Msa0311540:intron 40.0%
! CGTCCAAAACGTTTTCTTTG+TGG - chr2_4:6394020-6394039 None:intergenic 40.0%
!! AAAGAAAACGTTTTGGACGG+TGG + chr2_4:6394021-6394040 Msa0311540:intron 40.0%
AACCATATTTATAGGGGAGG+GGG - chr2_4:6394105-6394124 None:intergenic 40.0%
GAACCATATTTATAGGGGAG+GGG - chr2_4:6394106-6394125 None:intergenic 40.0%
GGAGAAGAGAAGAAAGAAGA+AGG - chr2_4:6394150-6394169 None:intergenic 40.0%
GAAACACATCATTGTAGAGG+AGG - chr2_4:6394171-6394190 None:intergenic 40.0%
CAATGATGTGTTTCCATCGT+TGG + chr2_4:6394177-6394196 Msa0311540:intron 40.0%
TTTCTATGAAAGGCCAACGA+TGG - chr2_4:6394193-6394212 None:intergenic 40.0%
AAGAGGCCTCTTTCTATGAA+AGG - chr2_4:6394203-6394222 None:intergenic 40.0%
TTCATAGAAAGAGGCCTCTT+TGG + chr2_4:6394203-6394222 Msa0311540:intron 40.0%
GGTCATATGATCGGTCAATA+GGG + chr2_4:6394238-6394257 Msa0311540:intron 40.0%
ATATGATCGGTCAATAGGGT+GGG + chr2_4:6394242-6394261 Msa0311540:intron 40.0%
CGGTGAAGAAGAAAATCTGT+TGG - chr2_4:6394364-6394383 None:intergenic 40.0%
CTGTTCCGGAATATACAATC+CGG + chr2_4:6394669-6394688 Msa0311540:intron 40.0%
! CTTGTCCGGATTATGTTTTC+CGG - chr2_4:6394713-6394732 None:intergenic 40.0%
GGAAAACATAATCCGGACAA+GGG + chr2_4:6394712-6394731 Msa0311540:intron 40.0%
GAAAACATAATCCGGACAAG+GGG + chr2_4:6394713-6394732 Msa0311540:intron 40.0%
TCTCCCCGTCTTTATAGAAA+AGG - chr2_4:6395321-6395340 None:intergenic 40.0%
! TTTTCTATAAAGACGGGGAG+AGG + chr2_4:6395320-6395339 Msa0311540:intron 40.0%
GTTAGACAGTAAGAAGAGAG+AGG - chr2_4:6395402-6395421 None:intergenic 40.0%
CTCTCTTCTTACTGTCTAAC+TGG + chr2_4:6395402-6395421 Msa0311540:intron 40.0%
! CTATGTTTGGAGTAGTTGCT+AGG - chr2_4:6395593-6395612 None:intergenic 40.0%
GCTAGCTGAAGAGATTCTAA+AGG + chr2_4:6395764-6395783 Msa0311540:CDS 40.0%
! AGCTGAAGAGATTCTAAAGG+GGG + chr2_4:6395767-6395786 Msa0311540:CDS 40.0%
AAGGAGTAGAAGCAAAACTC+TGG + chr2_4:6395802-6395821 Msa0311540:CDS 40.0%
AGCTGTTTAGGTGAAATGTC+TGG - chr2_4:6396133-6396152 None:intergenic 40.0%
GACATCATTCCATATCTTGC+TGG - chr2_4:6396187-6396206 None:intergenic 40.0%
TGGAACAAACAAACACTTGC+AGG + chr2_4:6396247-6396266 Msa0311540:intron 40.0%
! TTTTTCTCCACTGCTTCTCA+AGG + chr2_4:6396286-6396305 Msa0311540:intron 40.0%
TGAGAAGGATGAGTGACTAA+CGG - chr2_4:6396331-6396350 None:intergenic 40.0%
! GTGAAGAAGTGAAGTATCTG+GGG + chr2_4:6396426-6396445 Msa0311540:intron 40.0%
ACATATTATACGCAGAGGTC+GGG - chr2_4:6396459-6396478 None:intergenic 40.0%
!! AGTTTAACTCAGTTGGTAGG+GGG - chr2_4:6396486-6396505 None:intergenic 40.0%
!! GAGTTTAACTCAGTTGGTAG+GGG - chr2_4:6396487-6396506 None:intergenic 40.0%
GTGAGTTTAACTCAGTTGGT+AGG - chr2_4:6396489-6396508 None:intergenic 40.0%
ACCAACTGAGTTAAACTCAC+TGG + chr2_4:6396489-6396508 Msa0311540:intron 40.0%
CCAACTGAGTTAAACTCACT+GGG + chr2_4:6396490-6396509 Msa0311540:intron 40.0%
TTCTTGGACTCTACGTATAC+GGG - chr2_4:6396674-6396693 None:intergenic 40.0%
!! TAAAATGGCGGACTCTTTCT+TGG - chr2_4:6396690-6396709 None:intergenic 40.0%
ACCATGGAAGATGTAATCAG+GGG + chr2_4:6396865-6396884 Msa0311540:intron 40.0%
! GTTAACAGAGAGTTTGAGAC+CGG - chr2_4:6397202-6397221 None:intergenic 40.0%
AAGCCAGCCTAAATTCTACA+AGG - chr2_4:6397633-6397652 None:intergenic 40.0%
! ATTACTCAGCTTGTTCACCA+TGG + chr2_4:6397740-6397759 Msa0311540:intron 40.0%
GCACCAAATGTGTATCCAAT+AGG - chr2_4:6397779-6397798 None:intergenic 40.0%
!! ATTGGATACACATTTGGTGC+TGG + chr2_4:6397779-6397798 Msa0311540:CDS 40.0%
! GTTTGAGATGGAAAAGGTGA+AGG + chr2_4:6397805-6397824 Msa0311540:CDS 40.0%
CCAAAAGTTCCTGAACCATA+TGG - chr2_4:6397839-6397858 None:intergenic 40.0%
! CCATATGGTTCAGGAACTTT+TGG + chr2_4:6397836-6397855 Msa0311540:CDS 40.0%
!! ACTTTTGGGGAACATGGAAT+AGG + chr2_4:6397851-6397870 Msa0311540:CDS 40.0%
TGAGCCAATTCTAACTCACT+AGG - chr2_4:6397881-6397900 None:intergenic 40.0%
!! ATTGGCTCAAGCTTTTCATC+AGG + chr2_4:6397892-6397911 Msa0311540:CDS 40.0%
! TTGGCTCAAGCTTTTCATCA+GGG + chr2_4:6397893-6397912 Msa0311540:CDS 40.0%
CATCAGGGAAAATACTTTGC+TGG + chr2_4:6397908-6397927 Msa0311540:CDS 40.0%
GGAATTGCAAAGAAGCTCAA+AGG + chr2_4:6391122-6391141 Msa0311540:CDS 40.0%
!! AGAAACCAAAAGGGCGTTCT+TGG - chr2_4:6389710-6389729 None:intergenic 45.0%
TGTAGAAGCAAAACTCTGGC+AGG + chr2_4:6389983-6390002 Msa0311540:CDS 45.0%
GCCTGAAATATTGCCAGAAG+AGG + chr2_4:6390122-6390141 Msa0311540:CDS 45.0%
ATCTTCCCAAGAACCTCTTC+TGG - chr2_4:6390138-6390157 None:intergenic 45.0%
AATGAGCTTCTTGAGGCTGA+TGG + chr2_4:6390198-6390217 Msa0311540:CDS 45.0%
TGGATACAACTGGAGACCTA+TGG + chr2_4:6390280-6390299 Msa0311540:CDS 45.0%
CAAGTTTCTGTGTGCACCAT+AGG - chr2_4:6390299-6390318 None:intergenic 45.0%
GATAGCACTTGCGGAAAGTA+TGG - chr2_4:6390825-6390844 None:intergenic 45.0%
CATGACTCTGATAGCACTTG+CGG - chr2_4:6390834-6390853 None:intergenic 45.0%
CGGGCACAAAAATCATTCCA+TGG - chr2_4:6390953-6390972 None:intergenic 45.0%
! GGAATGATTTTTGTGCCCGT+TGG + chr2_4:6390954-6390973 Msa0311540:CDS 45.0%
GCACCAAATGTGTATCCAAC+GGG - chr2_4:6390972-6390991 None:intergenic 45.0%
!! GTTGGATACACATTTGGTGC+TGG + chr2_4:6390972-6390991 Msa0311540:CDS 45.0%
GCATAAGTTCCAGCACCATA+TGG - chr2_4:6391032-6391051 None:intergenic 45.0%
! TATGGTGCTGGAACTTATGC+AGG + chr2_4:6391032-6391051 Msa0311540:CDS 45.0%
! ATGGTGCTGGAACTTATGCA+GGG + chr2_4:6391033-6391052 Msa0311540:CDS 45.0%
ACAGCCCACTGAATTAGAAC+TGG + chr2_4:6391067-6391086 Msa0311540:CDS 45.0%
! CTGGCTCAAGCTTTTCATCA+AGG + chr2_4:6391086-6391105 Msa0311540:CDS 45.0%
AGTGGATGCAGAATATGCAG+TGG - chr2_4:6391168-6391187 None:intergenic 45.0%
TATCCTGGACGATGTTGATG+TGG + chr2_4:6391315-6391334 Msa0311540:intron 45.0%
GTTCCACTCAAGAATCGAGT+TGG - chr2_4:6391454-6391473 None:intergenic 45.0%
ACGCCGAACTCCATATTAAC+AGG + chr2_4:6391485-6391504 Msa0311540:intron 45.0%
CGCCGAACTCCATATTAACA+GGG + chr2_4:6391486-6391505 Msa0311540:intron 45.0%
! TCCTTTTCCTAAGACCCAGA+GGG + chr2_4:6391511-6391530 Msa0311540:intron 45.0%
AATGGATCACCATCTACGAC+CGG - chr2_4:6391890-6391909 None:intergenic 45.0%
! TGAGAAAGGGTGGTACCTTT+TGG - chr2_4:6392125-6392144 None:intergenic 45.0%
!!! TTTTTTTTGGGTGGGTGGGT+GGG - chr2_4:6392375-6392394 None:intergenic 45.0%
!!! ATTTTTTTTGGGTGGGTGGG+TGG - chr2_4:6392376-6392395 None:intergenic 45.0%
TTCCAAAAATACCCCTGGTC+CGG + chr2_4:6392871-6392890 Msa0311540:intron 45.0%
CGAAAAATGTAATCCGGACC+AGG - chr2_4:6392887-6392906 None:intergenic 45.0%
ATTGCATTGCAGCTTGTGTG+GGG - chr2_4:6393014-6393033 None:intergenic 45.0%
CAATTGCATTGCAGCTTGTG+TGG - chr2_4:6393016-6393035 None:intergenic 45.0%
!!! GTAGCTTTTGGGAGTGTTTG+TGG - chr2_4:6393075-6393094 None:intergenic 45.0%
! AACTAACCGGCCAAACCTTT+TGG + chr2_4:6393265-6393284 Msa0311540:intron 45.0%
GTTTCACCAAAAGGTTTGGC+CGG - chr2_4:6393274-6393293 None:intergenic 45.0%
! ACCTTTTGGTGAAACGTCAC+TGG + chr2_4:6393279-6393298 Msa0311540:intron 45.0%
!! GGAAGCACTCAGTAACAACT+TGG - chr2_4:6393305-6393324 None:intergenic 45.0%
! GCTTTTGAACTCGATCTTGC+CGG + chr2_4:6393430-6393449 Msa0311540:intron 45.0%
ATCGTAACATGTCAGTTGGC+AGG - chr2_4:6393456-6393475 None:intergenic 45.0%
GCCAACTGACATGTTACGAT+CGG + chr2_4:6393456-6393475 Msa0311540:intron 45.0%
CTTTCTAATGCTGTCGCGAA+TGG - chr2_4:6393658-6393677 None:intergenic 45.0%
! GGTGTGTTTGTGTGTTTTGC+TGG + chr2_4:6393717-6393736 Msa0311540:intron 45.0%
! CGGAGAGGGTGTATTTATAG+AGG + chr2_4:6393756-6393775 Msa0311540:intron 45.0%
AATCCGGATTGCTTCAGCAT+AGG - chr2_4:6393840-6393859 None:intergenic 45.0%
GAAACTTGGGACGTTGTGTA+TGG - chr2_4:6393885-6393904 None:intergenic 45.0%
CAACGTCCCAAGTTTCACTT+TGG + chr2_4:6393889-6393908 Msa0311540:intron 45.0%
GGTGTCCCAAAGTGAAACTT+GGG - chr2_4:6393898-6393917 None:intergenic 45.0%
GCATTCCGGATAACGTATTC+CGG - chr2_4:6393937-6393956 None:intergenic 45.0%
TCCGGAATGCATGTGTTATC+CGG + chr2_4:6393947-6393966 Msa0311540:intron 45.0%
TCCGGATAACACATGCATTC+CGG - chr2_4:6393951-6393970 None:intergenic 45.0%
GCAGTCCGGAAGATATAATC+CGG - chr2_4:6393969-6393988 None:intergenic 45.0%
!!! CGTTTTTTGACCGGCATTGA+TGG + chr2_4:6394059-6394078 Msa0311540:intron 45.0%
AGGGGGGTTAAAAAACGTGT+GGG - chr2_4:6394088-6394107 None:intergenic 45.0%
ACCATATTTATAGGGGAGGG+GGG - chr2_4:6394104-6394123 None:intergenic 45.0%
!! CGTTGGCCTTTCATAGAAAG+AGG + chr2_4:6394194-6394213 Msa0311540:intron 45.0%
!! GCCTCTTTGGAAAAGCATCA+GGG + chr2_4:6394216-6394235 Msa0311540:intron 45.0%
!! CCTCTTTGGAAAAGCATCAG+GGG + chr2_4:6394217-6394236 Msa0311540:intron 45.0%
AGCATCAGGGGTCATATGAT+CGG + chr2_4:6394229-6394248 Msa0311540:intron 45.0%
GGGTCATATGATCGGTCAAT+AGG + chr2_4:6394237-6394256 Msa0311540:intron 45.0%
CATATGATCGGTCAATAGGG+TGG + chr2_4:6394241-6394260 Msa0311540:intron 45.0%
TATGATCGGTCAATAGGGTG+GGG + chr2_4:6394243-6394262 Msa0311540:intron 45.0%
! GGTCAGTTTGAATCTGAGGT+TGG + chr2_4:6394265-6394284 Msa0311540:intron 45.0%
!! AATCTGAGGTTGGTTTGCCT+GGG + chr2_4:6394275-6394294 Msa0311540:intron 45.0%
TAGGGAACAAGAGACCATGA+TGG - chr2_4:6394312-6394331 None:intergenic 45.0%
TGATGAAGAGGAAAGAGGGT+GGG - chr2_4:6394401-6394420 None:intergenic 45.0%
CCACTGATGAAGAGGAAAGA+GGG - chr2_4:6394405-6394424 None:intergenic 45.0%
CGGAAAACATAATCCGGACA+AGG + chr2_4:6394711-6394730 Msa0311540:intron 45.0%
CAACATGTCCGTACACAGAA+TGG - chr2_4:6395740-6395759 None:intergenic 45.0%
AGTAGAAGCAAAACTCTGGC+AGG + chr2_4:6395806-6395825 Msa0311540:CDS 45.0%
! GAGGTGCTTTCATCTTCCTT+AGG - chr2_4:6396096-6396115 None:intergenic 45.0%
! ATGTCTGGAACTTCACTCCT+TGG - chr2_4:6396118-6396137 None:intergenic 45.0%
TCAGCTTCAGCAAGCTGTTT+AGG - chr2_4:6396145-6396164 None:intergenic 45.0%
!! AAACAGCTTGCTGAAGCTGA+TGG + chr2_4:6396145-6396164 Msa0311540:CDS 45.0%
TGACTAACGGTGTTTCCTCT+TGG - chr2_4:6396318-6396337 None:intergenic 45.0%
! ATGTGTGAGCTCTAACCACT+AGG - chr2_4:6396399-6396418 None:intergenic 45.0%
CCCAGTGAGTTTAACTCAGT+TGG - chr2_4:6396493-6396512 None:intergenic 45.0%
CCATGGAAGATGTAATCAGG+GGG + chr2_4:6396866-6396885 Msa0311540:intron 45.0%
CATGGAAGATGTAATCAGGG+GGG + chr2_4:6396867-6396886 Msa0311540:intron 45.0%
AAGATGTAATCAGGGGGGAA+GGG + chr2_4:6396872-6396891 Msa0311540:intron 45.0%
! TGGTGCTGGAATGTTTGAGA+TGG + chr2_4:6390986-6391005 Msa0311540:CDS 45.0%
!! TCAGGAACTTTTGGGGAACA+TGG + chr2_4:6397845-6397864 Msa0311540:CDS 45.0%
!! AATAGTTAAATAATTATAAA+AGG - chr2_4:6392288-6392307 None:intergenic 5.0%
!!! TTTTATAATTATTTAACTAT+TGG + chr2_4:6392287-6392306 Msa0311540:intron 5.0%
!!! GATAATTTTTTATTTTTTTT+GGG - chr2_4:6392387-6392406 None:intergenic 5.0%
!!! AGATAATTTTTTATTTTTTT+TGG - chr2_4:6392388-6392407 None:intergenic 5.0%
!! AAACAAATATTTAAATATAT+AGG + chr2_4:6392677-6392696 Msa0311540:intron 5.0%
!! ATATTATAATTCATATATTA+AGG + chr2_4:6396045-6396064 Msa0311540:intron 5.0%
!!! TTTTTCTTTTTAAAAAAAAA+GGG - chr2_4:6396919-6396938 None:intergenic 5.0%
!!! ATTTTTCTTTTTAAAAAAAA+AGG - chr2_4:6396920-6396939 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG - chr2_4:6397316-6397335 None:intergenic 5.0%
!!! ATGAATTTTTATATTTTTTA+CGG - chr2_4:6397316-6397335 None:intergenic 5.0%
! ACTCACCAAGAACGCCCTTT+TGG + chr2_4:6389702-6389721 Msa0311540:CDS 50.0%
TGGTGCACACAGAAACTTGC+AGG + chr2_4:6390300-6390319 Msa0311540:CDS 50.0%
AAACTTGCAGGAAAGCCTGC+TGG + chr2_4:6390312-6390331 Msa0311540:CDS 50.0%
GTGCTGTAAAAGATGCCAGC+AGG - chr2_4:6390330-6390349 None:intergenic 50.0%
TACAGCACTGCTTGTCAAGG+AGG + chr2_4:6390342-6390361 Msa0311540:CDS 50.0%
CGCAAGTGCTATCAGAGTCA+TGG + chr2_4:6390832-6390851 Msa0311540:intron 50.0%
GTGCCCGTTGGATACACATT+TGG + chr2_4:6390966-6390985 Msa0311540:CDS 50.0%
GTGAAAGGTGGCTCACCATA+TGG + chr2_4:6391014-6391033 Msa0311540:CDS 50.0%
! TGGTGCTGGAACTTATGCAG+GGG + chr2_4:6391034-6391053 Msa0311540:CDS 50.0%
CTACCACATCAACATCGTCC+AGG - chr2_4:6391321-6391340 None:intergenic 50.0%
! CTCCTTTTCCTAAGACCCAG+AGG + chr2_4:6391510-6391529 Msa0311540:intron 50.0%
ACCCTCTGGGTCTTAGGAAA+AGG - chr2_4:6391515-6391534 None:intergenic 50.0%
GTGTTAACCCTCTGGGTCTT+AGG - chr2_4:6391521-6391540 None:intergenic 50.0%
! TTTTTGCAAGGCGCACGAGA+AGG - chr2_4:6392850-6392869 None:intergenic 50.0%
!!! ATCCGGACCAGGGGTATTTT+TGG - chr2_4:6392876-6392895 None:intergenic 50.0%
!! TGGGAGTGTTTGTGGTGTCA+TGG - chr2_4:6393067-6393086 None:intergenic 50.0%
GCCAGTGACGTTTCACCAAA+AGG - chr2_4:6393283-6393302 None:intergenic 50.0%
TTTGGGAAGGTGGTTCGAAG+AGG + chr2_4:6393406-6393425 Msa0311540:intron 50.0%
TAACATGTCAGTTGGCAGGC+CGG - chr2_4:6393452-6393471 None:intergenic 50.0%
GCCGATCGTAACATGTCAGT+TGG - chr2_4:6393460-6393479 None:intergenic 50.0%
ACTGACATGTTACGATCGGC+AGG + chr2_4:6393460-6393479 Msa0311540:intron 50.0%
!! GTGTATGGTGAGGGTTGGTT+CGG - chr2_4:6393870-6393889 None:intergenic 50.0%
ACGTTGTGTATGGTGAGGGT+TGG - chr2_4:6393875-6393894 None:intergenic 50.0%
TGGGACGTTGTGTATGGTGA+GGG - chr2_4:6393879-6393898 None:intergenic 50.0%
TTGGGACGTTGTGTATGGTG+AGG - chr2_4:6393880-6393899 None:intergenic 50.0%
GGGTGTCCCAAAGTGAAACT+TGG - chr2_4:6393899-6393918 None:intergenic 50.0%
CTAAAGCTTCTGGTGCAGTC+CGG - chr2_4:6393983-6394002 None:intergenic 50.0%
TTCTTTGTGGTGCAGACCAC+CGG - chr2_4:6394007-6394026 None:intergenic 50.0%
GGGGTTAAAAAACGTGTGGG+AGG - chr2_4:6394085-6394104 None:intergenic 50.0%
GAGGGGGGTTAAAAAACGTG+TGG - chr2_4:6394089-6394108 None:intergenic 50.0%
ACCCCCCTCCCCTATAAATA+TGG + chr2_4:6394100-6394119 Msa0311540:intron 50.0%
!! GGCCTCTTTGGAAAAGCATC+AGG + chr2_4:6394215-6394234 Msa0311540:intron 50.0%
! CCCCTGATGCTTTTCCAAAG+AGG - chr2_4:6394220-6394239 None:intergenic 50.0%
ATGATCGGTCAATAGGGTGG+GGG + chr2_4:6394244-6394263 Msa0311540:intron 50.0%
TGGGGGTCAGTTTGAATCTG+AGG + chr2_4:6394261-6394280 Msa0311540:intron 50.0%
!! GAATCTGAGGTTGGTTTGCC+TGG + chr2_4:6394274-6394293 Msa0311540:intron 50.0%
TGATGGTCAACATGACACCC+AGG - chr2_4:6394295-6394314 None:intergenic 50.0%
! GGGTGTCATGTTGACCATCA+TGG + chr2_4:6394295-6394314 Msa0311540:intron 50.0%
CTGATGAAGAGGAAAGAGGG+TGG - chr2_4:6394402-6394421 None:intergenic 50.0%
CCCTCTTTCCTCTTCATCAG+TGG + chr2_4:6394402-6394421 Msa0311540:intron 50.0%
GCCACTGATGAAGAGGAAAG+AGG - chr2_4:6394406-6394425 None:intergenic 50.0%
CTTTCCTCTTCATCAGTGGC+TGG + chr2_4:6394406-6394425 Msa0311540:intron 50.0%
AACTCCAGCCACTGATGAAG+AGG - chr2_4:6394413-6394432 None:intergenic 50.0%
TGAAAAAAATAGGGCGCGCG+AGG + chr2_4:6394742-6394761 Msa0311540:intron 50.0%
!! GGAAGATGAAAGCACCTCCA+AGG + chr2_4:6390151-6390170 Msa0311540:CDS 50.0%
! TCTGGAACTTCACTCCTTGG+AGG - chr2_4:6396115-6396134 None:intergenic 50.0%
GTGGAGAAAAAGAAGCCAGC+AGG - chr2_4:6396277-6396296 None:intergenic 50.0%
TCCACTGCTTCTCAAGGAAG+TGG + chr2_4:6396292-6396311 Msa0311540:intron 50.0%
TTCTCAAGGAAGTGGCCAAG+AGG + chr2_4:6396300-6396319 Msa0311540:intron 50.0%
CCCCCTGATTACATCTTCCA+TGG - chr2_4:6396869-6396888 None:intergenic 50.0%
GAAGATGTAATCAGGGGGGA+AGG + chr2_4:6396871-6396890 Msa0311540:intron 50.0%
AAAAAAGGGTGGGGTAGCCT+TGG - chr2_4:6396905-6396924 None:intergenic 50.0%
!! ATTTAGGCTGGCTTCGCCAT+CGG + chr2_4:6397639-6397658 Msa0311540:intron 50.0%
GAGATGGAAAAGGTGAAGGG+TGG + chr2_4:6397809-6397828 Msa0311540:CDS 50.0%
GTGAAGGGTGGATCACCATA+TGG + chr2_4:6397821-6397840 Msa0311540:CDS 50.0%
GGTGGATCACCATATGGTTC+AGG + chr2_4:6397827-6397846 Msa0311540:CDS 50.0%
AGCACTGCTTGTCAAGGAGG+TGG + chr2_4:6390345-6390364 Msa0311540:CDS 55.0%
GCTGGAACTTATGCAGGGGA+TGG + chr2_4:6391038-6391057 Msa0311540:CDS 55.0%
ATGATCAGGGATGCACCCTC+CGG + chr2_4:6392496-6392515 Msa0311540:intron 55.0%
CGGACTGCACCAGAAGCTTT+AGG + chr2_4:6393981-6394000 Msa0311540:intron 55.0%
!! CTGCACCAGAAGCTTTAGGC+CGG + chr2_4:6393985-6394004 Msa0311540:intron 55.0%
! TCTGTTGGTGGGGAGACAGA+GGG - chr2_4:6394349-6394368 None:intergenic 55.0%
! ATCTGTTGGTGGGGAGACAG+AGG - chr2_4:6394350-6394369 None:intergenic 55.0%
GGTGGGAGGAAAGAAGATGG+CGG - chr2_4:6394384-6394403 None:intergenic 55.0%
GAGGGTGGGAGGAAAGAAGA+TGG - chr2_4:6394387-6394406 None:intergenic 55.0%
TGAAGAGGAAAGAGGGTGGG+AGG - chr2_4:6394398-6394417 None:intergenic 55.0%
TCAGTGGCTGGAGTTAGAGC+TGG + chr2_4:6394418-6394437 Msa0311540:intron 55.0%
AAAATAGGGCGCGCGAGGAA+AGG + chr2_4:6394747-6394766 Msa0311540:intron 55.0%
AAGGGGGCTGCATCTGTAGA+AGG + chr2_4:6395783-6395802 Msa0311540:CDS 55.0%
ACACTTGCAGGAAAGCCTGC+TGG + chr2_4:6396259-6396278 Msa0311540:intron 55.0%
GCCACTTCCTTGAGAAGCAG+TGG - chr2_4:6396296-6396315 None:intergenic 55.0%
GGTGGCTCACCATATGGTGC+TGG + chr2_4:6391020-6391039 Msa0311540:CDS 60.0%
!! TTTTGGGTGGGTGGGTGGGT+GGG - chr2_4:6392371-6392390 None:intergenic 60.0%
!!! TTTTTGGGTGGGTGGGTGGG+TGG - chr2_4:6392372-6392391 None:intergenic 60.0%
GCACGAGAAGGCCATAGGGT+GGG - chr2_4:6392838-6392857 None:intergenic 60.0%
AGGCGCACGAGAAGGCCATA+GGG - chr2_4:6392842-6392861 None:intergenic 60.0%
AAGGCGCACGAGAAGGCCAT+AGG - chr2_4:6392843-6392862 None:intergenic 60.0%
!! CACCAGAAGCTTTAGGCCGG+TGG + chr2_4:6393988-6394007 Msa0311540:intron 60.0%
GACCACCGGCCTAAAGCTTC+TGG - chr2_4:6393993-6394012 None:intergenic 60.0%
GTGTGGGAGGCCATCAATGC+CGG - chr2_4:6394072-6394091 None:intergenic 60.0%
! TGTTGGTGGGGAGACAGAGG+GGG - chr2_4:6394347-6394366 None:intergenic 60.0%
! CTGTTGGTGGGGAGACAGAG+GGG - chr2_4:6394348-6394367 None:intergenic 60.0%
GGAGTTAGAGCTGGAGCCAC+TGG + chr2_4:6394427-6394446 Msa0311540:intron 60.0%
! CGCGAGGAAAGGCATAGGGT+GGG + chr2_4:6394758-6394777 Msa0311540:intron 60.0%
CGCACGAGAAGGCCATAGGG+TGG - chr2_4:6392839-6392858 None:intergenic 65.0%
! AGGGGGCACAGGGGTCTCTA+GGG - chr2_4:6394330-6394349 None:intergenic 65.0%
! GGCGCGCGAGGAAAGGCATA+GGG + chr2_4:6394754-6394773 Msa0311540:intron 65.0%
! GCGCGAGGAAAGGCATAGGG+TGG + chr2_4:6394757-6394776 Msa0311540:intron 65.0%
GGGGGAAGGGTAGTGTGCCA+AGG + chr2_4:6396885-6396904 Msa0311540:intron 65.0%
! GAGGGGGCACAGGGGTCTCT+AGG - chr2_4:6394331-6394350 None:intergenic 70.0%
! GGGAGACAGAGGGGGCACAG+GGG - chr2_4:6394339-6394358 None:intergenic 70.0%
! GGGGAGACAGAGGGGGCACA+GGG - chr2_4:6394340-6394359 None:intergenic 70.0%
! TGGGGAGACAGAGGGGGCAC+AGG - chr2_4:6394341-6394360 None:intergenic 70.0%
! GGGCGCGCGAGGAAAGGCAT+AGG + chr2_4:6394753-6394772 Msa0311540:intron 70.0%
TGGGTGGGTGGGTGGGTGGG+GGG - chr2_4:6392364-6392383 None:intergenic 75.0%
GTGGGTGGGTGGGTGGGTGG+GGG - chr2_4:6392365-6392384 None:intergenic 75.0%
GGTGGGTGGGTGGGTGGGTG+GGG - chr2_4:6392366-6392385 None:intergenic 75.0%
GGGTGGGTGGGTGGGTGGGT+GGG - chr2_4:6392367-6392386 None:intergenic 75.0%
TGGGTGGGTGGGTGGGTGGG+TGG - chr2_4:6392364-6392383 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 6389648 6397961 6389648 ID=Msa0311540;Name=Msa0311540
chr2_4 mRNA 6389648 6397961 6389648 ID=Msa0311540-mRNA-1;Parent=Msa0311540;Name=Msa0311540-mRNA-1;_AED=0.16;_eAED=0.17;_QI=0|0|0|1|0.57|0.37|8|0|393
chr2_4 exon 6389648 6389802 6389648 ID=Msa0311540-mRNA-1:exon:2452;Parent=Msa0311540-mRNA-1
chr2_4 exon 6389911 6390004 6389911 ID=Msa0311540-mRNA-1:exon:2453;Parent=Msa0311540-mRNA-1
chr2_4 exon 6390120 6390226 6390120 ID=Msa0311540-mRNA-1:exon:2454;Parent=Msa0311540-mRNA-1
chr2_4 exon 6390245 6390382 6390245 ID=Msa0311540-mRNA-1:exon:2455;Parent=Msa0311540-mRNA-1
chr2_4 exon 6390923 6391150 6390923 ID=Msa0311540-mRNA-1:exon:2456;Parent=Msa0311540-mRNA-1
chr2_4 exon 6395734 6395827 6395734 ID=Msa0311540-mRNA-1:exon:2457;Parent=Msa0311540-mRNA-1
chr2_4 exon 6396067 6396219 6396067 ID=Msa0311540-mRNA-1:exon:2458;Parent=Msa0311540-mRNA-1
chr2_4 exon 6397749 6397961 6397749 ID=Msa0311540-mRNA-1:exon:2459;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6389648 6389802 6389648 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6389911 6390004 6389911 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6390120 6390226 6390120 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6390245 6390382 6390245 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6390923 6391150 6390923 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6395734 6395827 6395734 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6396067 6396219 6396067 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
chr2_4 CDS 6397749 6397961 6397749 ID=Msa0311540-mRNA-1:cds;Parent=Msa0311540-mRNA-1
Gene Sequence

>Msa0311540

ATGGAATTGGTTTTGTGTATAAAAATATGCAAGCTGCATACACTTCACGTTCACACTCACCAAGAACGCCCTTTTGGTTTCTATAGAGACAGAGAGAACAGAGCAGTTCAAGACTTCAAGTTACTAGCAGCAATGGCTACTAAAGTTTACATTGTCTACTATTCTATGTATGGACATGTTGGGAAGCTAGCTGAAGAGATCAAAAATGGAGTTGAATCCATAGAAGGTGTAGAAGCAAAACTCTGGCAGGTGCCTGAAATATTGCCAGAAGAGGTTCTTGGGAAGATGAAAGCACCTCCAAAGAGTGATGTTCCAATTATTTCAGCAAATGAGCTTCTTGAGGCTGATGGTTTTTTATTTGGAATGATGGCTACTCAATTCAAAGCATTTATGGATACAACTGGAGACCTATGGTGCACACAGAAACTTGCAGGAAAGCCTGCTGGCATCTTTTACAGCACTGCTTGTCAAGGAGGTGGTCAAGAAACTACACCGTTGACATCTATTACACAACTTGTTCACCATGGAATGATTTTTGTGCCCGTTGGATACACATTTGGTGCTGGAATGTTTGAGATAGAAAAGGTGAAAGGTGGCTCACCATATGGTGCTGGAACTTATGCAGGGGATGGCTCAAGACAGCCCACTGAATTAGAACTGGCTCAAGCTTTTCATCAAGGGAAATACTTTGCGGGAATTGCAAAGAAGCTCAAAGGGTCACATTACCATTCTGTGTACGGACATGTTGAGAAGCTAGCTGAAGAGATTCTAAAGGGGGCTGCATCTGTAGAAGGAGTAGAAGCAAAACTCTGGCAGGTACCAGAAATATTGTCTGAAGAAATCCTAAGGAAGATGAAAGCACCTCCAAGGAGTGAAGTTCCAGACATTTCACCTAAACAGCTTGCTGAAGCTGATGGTTTTTTGTTTGGTTTTCCAGCAAGATATGGAATGATGTCTGCTCAATTCAAACTTGTTCACCATGGTATGATTTTTGTACCTATTGGATACACATTTGGTGCTGGAATGTTTGAGATGGAAAAGGTGAAGGGTGGATCACCATATGGTTCAGGAACTTTTGGGGAACATGGAATAGGAGAACCTAGTGAGTTAGAATTGGCTCAAGCTTTTCATCAGGGAAAATACTTTGCTGGAATTGCAAAGAAGCTCAAAGGATCACAATGA

Protein sequence

>Msa0311540

MELVLCIKICKLHTLHVHTHQERPFGFYRDRENRAVQDFKLLAAMATKVYIVYYSMYGHVGKLAEEIKNGVESIEGVEAKLWQVPEILPEEVLGKMKAPPKSDVPIISANELLEADGFLFGMMATQFKAFMDTTGDLWCTQKLAGKPAGIFYSTACQGGGQETTPLTSITQLVHHGMIFVPVGYTFGAGMFEIEKVKGGSPYGAGTYAGDGSRQPTELELAQAFHQGKYFAGIAKKLKGSHYHSVYGHVEKLAEEILKGAASVEGVEAKLWQVPEILSEEILRKMKAPPRSEVPDISPKQLAEADGFLFGFPARYGMMSAQFKLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGSGTFGEHGIGEPSELELAQAFHQGKYFAGIAKKLKGSQ*