Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123530 | sp|Q9M2J7|LBD29_ARATH | 52.941 | 221 | 83 | 5 | 12 | 228 | 11 | 214 | 2.45e-69 | 214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123530 | A0A072VL56 | 95.726 | 234 | 5 | 1 | 1 | 229 | 1 | 234 | 2.27e-166 | 467 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0123530 | TF | LOB |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0123530 | 0.842683 | 2.225723e-58 | -8.615850e-47 |
| Msa0014590 | Msa0123530 | 0.816550 | 5.220808e-52 | -8.615850e-47 |
| Msa0017710 | Msa0123530 | 0.805892 | 1.071957e-49 | -8.615850e-47 |
| Msa0027860 | Msa0123530 | 0.949339 | 1.554076e-107 | -8.615850e-47 |
| Msa0048380 | Msa0123530 | 0.803701 | 3.074479e-49 | -8.615850e-47 |
| Msa0048950 | Msa0123530 | 0.807858 | 4.116490e-50 | -8.615850e-47 |
| Msa0059880 | Msa0123530 | 0.844263 | 8.427030e-59 | -8.615850e-47 |
| Msa0063540 | Msa0123530 | 0.801485 | 8.806908e-49 | -8.615850e-47 |
| Msa0074620 | Msa0123530 | 0.808562 | 2.914525e-50 | -8.615850e-47 |
| Msa0075560 | Msa0123530 | 0.911519 | 5.550235e-83 | -8.615850e-47 |
| Msa0087900 | Msa0123530 | 0.807818 | 4.197956e-50 | -8.615850e-47 |
| Msa0123530 | Msa0134570 | 0.802246 | 6.145515e-49 | -8.615850e-47 |
| Msa0123530 | Msa0140270 | 0.828546 | 8.464353e-55 | -8.615850e-47 |
| Msa0123530 | Msa0150910 | 0.844620 | 6.755751e-59 | -8.615850e-47 |
| Msa0123530 | Msa0150920 | 0.859231 | 4.772919e-63 | -8.615850e-47 |
| Msa0123530 | Msa0160580 | 0.800001 | 1.768743e-48 | -8.615850e-47 |
| Msa0123530 | Msa0163340 | 0.816824 | 4.530359e-52 | -8.615850e-47 |
| Msa0123530 | Msa0168010 | 0.922765 | 6.423407e-89 | -8.615850e-47 |
| Msa0123530 | Msa0177550 | 0.808713 | 2.705078e-50 | -8.615850e-47 |
| Msa0123530 | Msa0190670 | 0.849298 | 3.537540e-60 | -8.615850e-47 |
| Msa0123530 | Msa0194230 | 0.804558 | 2.039228e-49 | -8.615850e-47 |
| Msa0123530 | Msa0195190 | 0.801622 | 8.253504e-49 | -8.615850e-47 |
| Msa0123530 | Msa0195580 | 0.810378 | 1.187512e-50 | -8.615850e-47 |
| Msa0123530 | Msa0207640 | 0.846440 | 2.169321e-59 | -8.615850e-47 |
| Msa0123530 | Msa0209060 | 0.813011 | 3.176145e-51 | -8.615850e-47 |
| Msa0123530 | Msa0212550 | 0.807995 | 3.849832e-50 | -8.615850e-47 |
| Msa0123530 | Msa0238110 | 0.813714 | 2.225733e-51 | -8.615850e-47 |
| Msa0123530 | Msa0238140 | 0.806149 | 9.465841e-50 | -8.615850e-47 |
| Msa0123530 | Msa0242830 | 0.813183 | 2.911166e-51 | -8.615850e-47 |
| Msa0123530 | Msa0269710 | 0.809022 | 2.324019e-50 | -8.615850e-47 |
| Msa0123530 | Msa0272210 | 0.833789 | 4.357253e-56 | -8.615850e-47 |
| Msa0123530 | Msa0272230 | 0.805428 | 1.341119e-49 | -8.615850e-47 |
| Msa0123530 | Msa0274250 | 0.823553 | 1.302092e-53 | -8.615850e-47 |
| Msa0123530 | Msa0274260 | 0.847413 | 1.174933e-59 | -8.615850e-47 |
| Msa0123530 | Msa0278460 | 0.817153 | 3.823229e-52 | -8.615850e-47 |
| Msa0123530 | Msa0278950 | 0.819790 | 9.651490e-53 | -8.615850e-47 |
| Msa0123530 | Msa0281190 | 0.827456 | 1.549350e-54 | -8.615850e-47 |
| Msa0123530 | Msa0287720 | 0.819823 | 9.488101e-53 | -8.615850e-47 |
| Msa0123530 | Msa0288540 | 0.820111 | 8.148998e-53 | -8.615850e-47 |
| Msa0123530 | Msa0307630 | 0.807563 | 4.755957e-50 | -8.615850e-47 |
| Msa0123530 | Msa0314440 | 0.802483 | 5.491375e-49 | -8.615850e-47 |
| Msa0123530 | Msa0316600 | 0.800429 | 1.447526e-48 | -8.615850e-47 |
| Msa0123530 | Msa0326770 | 0.814183 | 1.753605e-51 | -8.615850e-47 |
| Msa0123530 | Msa0328090 | 0.811628 | 6.367182e-51 | -8.615850e-47 |
| Msa0123530 | Msa0346170 | 0.825143 | 5.503740e-54 | -8.615850e-47 |
| Msa0123530 | Msa0349910 | 0.816503 | 5.348708e-52 | -8.615850e-47 |
| Msa0123530 | Msa0366510 | 0.826615 | 2.460934e-54 | -8.615850e-47 |
| Msa0123530 | Msa0369990 | 0.819420 | 1.172681e-52 | -8.615850e-47 |
| Msa0123530 | Msa0374040 | 0.846270 | 2.413740e-59 | -8.615850e-47 |
| Msa0123530 | Msa0380680 | 0.827011 | 1.979674e-54 | -8.615850e-47 |
| Msa0123530 | Msa0396700 | 0.802905 | 4.493760e-49 | -8.615850e-47 |
| Msa0123530 | Msa0396730 | 0.805545 | 1.267487e-49 | -8.615850e-47 |
| Msa0123530 | Msa0396790 | 0.817351 | 3.450215e-52 | -8.615850e-47 |
| Msa0123530 | Msa0414480 | 0.838853 | 2.247333e-57 | -8.615850e-47 |
| Msa0123530 | Msa0417400 | 0.814733 | 1.325431e-51 | -8.615850e-47 |
| Msa0123530 | Msa0418160 | 0.818670 | 1.736867e-52 | -8.615850e-47 |
| Msa0123530 | Msa0423200 | 0.810907 | 9.128309e-51 | -8.615850e-47 |
| Msa0123530 | Msa0430460 | 0.803587 | 3.246512e-49 | -8.615850e-47 |
| Msa0123530 | Msa0444250 | 0.814180 | 1.756835e-51 | -8.615850e-47 |
| Msa0123530 | Msa0444400 | 0.828345 | 9.467032e-55 | -8.615850e-47 |
| Msa0123530 | Msa0459300 | 0.802130 | 6.491586e-49 | -8.615850e-47 |
| Msa0123530 | Msa0464310 | 0.847310 | 1.253622e-59 | -8.615850e-47 |
| Msa0123530 | Msa0469450 | 0.837617 | 4.677028e-57 | -8.615850e-47 |
| Msa0123530 | Msa0469460 | 0.803508 | 3.371688e-49 | -8.615850e-47 |
| Msa0123530 | Msa0490060 | 0.826856 | 2.156605e-54 | -8.615850e-47 |
| Msa0123530 | Msa0491800 | 0.804421 | 2.177648e-49 | -8.615850e-47 |
| Msa0123530 | Msa0491830 | 0.809700 | 1.661812e-50 | -8.615850e-47 |
| Msa0123530 | Msa0491950 | 0.813122 | 3.003050e-51 | -8.615850e-47 |
| Msa0123530 | Msa0507600 | 0.802235 | 6.177368e-49 | -8.615850e-47 |
| Msa0123530 | Msa0515130 | 0.830754 | 2.457070e-55 | -8.615850e-47 |
| Msa0123530 | Msa0515150 | 0.825101 | 5.632176e-54 | -8.615850e-47 |
| Msa0123530 | Msa0535570 | 0.862763 | 4.024939e-64 | -8.615850e-47 |
| Msa0123530 | Msa0538440 | 0.835018 | 2.142472e-56 | -8.615850e-47 |
| Msa0123530 | Msa0538450 | 0.830032 | 3.689092e-55 | -8.615850e-47 |
| Msa0123530 | Msa0538520 | 0.824828 | 6.531449e-54 | -8.615850e-47 |
| Msa0123530 | Msa0538530 | 0.820918 | 5.321330e-53 | -8.615850e-47 |
| Msa0123530 | Msa0543740 | 0.821113 | 4.798044e-53 | -8.615850e-47 |
| Msa0123530 | Msa0554660 | 0.821003 | 5.086309e-53 | -8.615850e-47 |
| Msa0123530 | Msa0555920 | 0.836852 | 7.337680e-57 | -8.615850e-47 |
| Msa0123530 | Msa0579530 | 0.802634 | 5.111692e-49 | -8.615850e-47 |
| Msa0123530 | Msa0587730 | 0.801261 | 9.786922e-49 | -8.615850e-47 |
| Msa0123530 | Msa0587920 | 0.806635 | 7.475589e-50 | -8.615850e-47 |
| Msa0123530 | Msa0589740 | 0.811123 | 8.194048e-51 | -8.615850e-47 |
| Msa0123530 | Msa0591490 | 0.860200 | 2.437595e-63 | -8.615850e-47 |
| Msa0123530 | Msa0594330 | 0.809475 | 1.858286e-50 | -8.615850e-47 |
| Msa0123530 | Msa0599600 | 0.800153 | 1.647544e-48 | -8.615850e-47 |
| Msa0123530 | Msa0604280 | 0.802756 | 4.824626e-49 | -8.615850e-47 |
| Msa0123530 | Msa0609460 | 0.832107 | 1.141237e-55 | -8.615850e-47 |
| Msa0123530 | Msa0629720 | 0.800693 | 1.278601e-48 | -8.615850e-47 |
| Msa0123530 | Msa0631700 | 0.843526 | 1.326959e-58 | -8.615850e-47 |
| Msa0123530 | Msa0634290 | 0.832323 | 1.009456e-55 | -8.615850e-47 |
| Msa0123530 | Msa0639410 | 0.818609 | 1.792809e-52 | -8.615850e-47 |
| Msa0123530 | Msa0643840 | 0.830857 | 2.318258e-55 | -8.615850e-47 |
| Msa0123530 | Msa0646210 | 0.803741 | 3.016737e-49 | -8.615850e-47 |
| Msa0123530 | Msa0650100 | 0.824804 | 6.618381e-54 | -8.615850e-47 |
| Msa0123530 | Msa0651820 | 0.802393 | 5.732137e-49 | -8.615850e-47 |
| Msa0123530 | Msa0668220 | 0.842331 | 2.760318e-58 | -8.615850e-47 |
| Msa0123530 | Msa0670360 | 0.864092 | 1.559269e-64 | -8.615850e-47 |
| Msa0123530 | Msa0671640 | 0.812396 | 4.329559e-51 | -8.615850e-47 |
| Msa0123530 | Msa0678620 | 0.806534 | 7.851007e-50 | -8.615850e-47 |
| Msa0123530 | Msa0680460 | 0.805035 | 1.620944e-49 | -8.615850e-47 |
| Msa0123530 | Msa0683690 | 0.802406 | 5.694829e-49 | -8.615850e-47 |
| Msa0123530 | Msa0685080 | 0.814296 | 1.656360e-51 | -8.615850e-47 |
| Msa0123530 | Msa0692090 | 0.824114 | 9.620138e-54 | -8.615850e-47 |
| Msa0123530 | Msa0699170 | 0.804077 | 2.568201e-49 | -8.615850e-47 |
| Msa0123530 | Msa0708680 | 0.803692 | 3.087289e-49 | -8.615850e-47 |
| Msa0123530 | Msa0711240 | 0.816232 | 6.149990e-52 | -8.615850e-47 |
| Msa0123530 | Msa0711250 | 0.807945 | 3.945359e-50 | -8.615850e-47 |
| Msa0123530 | Msa0715220 | 0.819466 | 1.144405e-52 | -8.615850e-47 |
| Msa0123530 | Msa0720870 | 0.806856 | 6.712225e-50 | -8.615850e-47 |
| Msa0123530 | Msa0727480 | 0.830647 | 2.610407e-55 | -8.615850e-47 |
| Msa0123530 | Msa0735280 | 0.800713 | 1.266929e-48 | -8.615850e-47 |
| Msa0123530 | Msa0751960 | 0.823574 | 1.287555e-53 | -8.615850e-47 |
| Msa0123530 | Msa0757120 | 0.832287 | 1.030178e-55 | -8.615850e-47 |
| Msa0123530 | Msa0768670 | 0.835701 | 1.439871e-56 | -8.615850e-47 |
| Msa0123530 | Msa0768720 | 0.827573 | 1.452378e-54 | -8.615850e-47 |
| Msa0123530 | Msa0777060 | 0.814422 | 1.552830e-51 | -8.615850e-47 |
| Msa0123530 | Msa0777070 | 0.817797 | 2.736825e-52 | -8.615850e-47 |
| Msa0123530 | Msa0777250 | 0.818270 | 2.139722e-52 | -8.615850e-47 |
| Msa0123530 | Msa0787860 | 0.811079 | 8.374375e-51 | -8.615850e-47 |
| Msa0123530 | Msa0792410 | 0.807444 | 5.040722e-50 | -8.615850e-47 |
| Msa0123530 | Msa0793570 | 0.800069 | 1.713258e-48 | -8.615850e-47 |
| Msa0123530 | Msa0806930 | 0.803501 | 3.382982e-49 | -8.615850e-47 |
| Msa0123530 | Msa0814160 | 0.854678 | 1.048894e-61 | -8.615850e-47 |
| Msa0123530 | Msa0814230 | 0.834020 | 3.815611e-56 | -8.615850e-47 |
| Msa0123530 | Msa0816140 | 0.808215 | 3.456171e-50 | -8.615850e-47 |
| Msa0123530 | Msa0822410 | 0.825217 | 5.286683e-54 | -8.615850e-47 |
| Msa0123530 | Msa0824850 | 0.810109 | 1.357470e-50 | -8.615850e-47 |
| Msa0123530 | Msa0824860 | 0.802571 | 5.266616e-49 | -8.615850e-47 |
| Msa0123530 | Msa0829990 | 0.806231 | 9.097155e-50 | -8.615850e-47 |
| Msa0123530 | Msa0831890 | 0.800271 | 1.558690e-48 | -8.615850e-47 |
| Msa0123530 | Msa0854840 | 0.836733 | 7.868937e-57 | -8.615850e-47 |
| Msa0123530 | Msa0861730 | 0.859972 | 2.855986e-63 | -8.615850e-47 |
| Msa0123530 | Msa0863840 | 0.804598 | 2.000010e-49 | -8.615850e-47 |
| Msa0123530 | Msa0863850 | 0.805759 | 1.143083e-49 | -8.615850e-47 |
| Msa0123530 | Msa0863860 | 0.801689 | 7.999672e-49 | -8.615850e-47 |
| Msa0123530 | Msa0864160 | 0.815830 | 7.560625e-52 | -8.615850e-47 |
| Msa0123530 | Msa0883640 | 0.801067 | 1.072359e-48 | -8.615850e-47 |
| Msa0123530 | Msa0893840 | 0.826949 | 2.048358e-54 | -8.615850e-47 |
| Msa0123530 | Msa0896910 | 0.810303 | 1.232614e-50 | -8.615850e-47 |
| Msa0123530 | Msa0896920 | 0.849585 | 2.942680e-60 | -8.615850e-47 |
| Msa0123530 | Msa0896950 | 0.836770 | 7.702201e-57 | -8.615850e-47 |
| Msa0123530 | Msa0902340 | 0.814358 | 1.604456e-51 | -8.615850e-47 |
| Msa0123530 | Msa0910830 | 0.816547 | 5.227305e-52 | -8.615850e-47 |
| Msa0123530 | Msa0913550 | 0.832598 | 8.628321e-56 | -8.615850e-47 |
| Msa0123530 | Msa0921180 | 0.803905 | 2.789261e-49 | -8.615850e-47 |
| Msa0123530 | Msa0932900 | 0.814376 | 1.589913e-51 | -8.615850e-47 |
| Msa0123530 | Msa0932930 | 0.812747 | 3.629023e-51 | -8.615850e-47 |
| Msa0123530 | Msa0933590 | 0.808582 | 2.885299e-50 | -8.615850e-47 |
| Msa0123530 | Msa0933610 | 0.807421 | 5.097487e-50 | -8.615850e-47 |
| Msa0123530 | Msa0941120 | 0.825930 | 3.584113e-54 | -8.615850e-47 |
| Msa0123530 | Msa0946010 | 0.824109 | 9.645929e-54 | -8.615850e-47 |
| Msa0123530 | Msa0951150 | 0.826566 | 2.529102e-54 | -8.615850e-47 |
| Msa0123530 | Msa0959700 | 0.805929 | 1.052618e-49 | -8.615850e-47 |
| Msa0123530 | Msa0960090 | 0.802030 | 6.807457e-49 | -8.615850e-47 |
| Msa0123530 | Msa0970790 | 0.803423 | 3.510234e-49 | -8.615850e-47 |
| Msa0123530 | Msa0975950 | 0.809975 | 1.450721e-50 | -8.615850e-47 |
| Msa0123530 | Msa0985700 | 0.801921 | 7.165420e-49 | -8.615850e-47 |
| Msa0123530 | Msa0993450 | 0.805676 | 1.189775e-49 | -8.615850e-47 |
| Msa0123530 | Msa0996980 | 0.825579 | 4.339980e-54 | -8.615850e-47 |
| Msa0123530 | Msa1006030 | 0.809710 | 1.653905e-50 | -8.615850e-47 |
| Msa0123530 | Msa1006170 | 0.851062 | 1.133638e-60 | -8.615850e-47 |
| Msa0123530 | Msa1007940 | 0.807999 | 3.841561e-50 | -8.615850e-47 |
| Msa0123530 | Msa1018590 | 0.805613 | 1.226405e-49 | -8.615850e-47 |
| Msa0123530 | Msa1021620 | 0.814904 | 1.214998e-51 | -8.615850e-47 |
| Msa0123530 | Msa1022490 | 0.832828 | 7.564376e-56 | -8.615850e-47 |
| Msa0123530 | Msa1022510 | 0.843987 | 9.990529e-59 | -8.615850e-47 |
| Msa0123530 | Msa1024350 | 0.830309 | 3.157669e-55 | -8.615850e-47 |
| Msa0123530 | Msa1024420 | 0.803863 | 2.845835e-49 | -8.615850e-47 |
| Msa0123530 | Msa1026050 | 0.805518 | 1.284337e-49 | -8.615850e-47 |
| Msa0123530 | Msa1030320 | 0.807876 | 4.080673e-50 | -8.615850e-47 |
| Msa0123530 | Msa1037360 | 0.803469 | 3.435455e-49 | -8.615850e-47 |
| Msa0123530 | Msa1041910 | 0.823697 | 1.204876e-53 | -8.615850e-47 |
| Msa0123530 | Msa1047300 | 0.806966 | 6.362630e-50 | -8.615850e-47 |
| Msa0123530 | Msa1047340 | 0.805390 | 1.366430e-49 | -8.615850e-47 |
| Msa0123530 | Msa1048350 | 0.845903 | 3.038247e-59 | -8.615850e-47 |
| Msa0123530 | Msa1048390 | 0.803005 | 4.285362e-49 | -8.615850e-47 |
| Msa0123530 | Msa1061670 | 0.844131 | 9.140590e-59 | -8.615850e-47 |
| Msa0123530 | Msa1064940 | 0.852999 | 3.191847e-61 | -8.615850e-47 |
| Msa0123530 | Msa1068080 | 0.804312 | 2.294481e-49 | -8.615850e-47 |
| Msa0123530 | Msa1076830 | 0.812312 | 4.516873e-51 | -8.615850e-47 |
| Msa0123530 | Msa1087370 | 0.813320 | 2.717426e-51 | -8.615850e-47 |
| Msa0123530 | Msa1087380 | 0.849015 | 4.240900e-60 | -8.615850e-47 |
| Msa0123530 | Msa1098100 | 0.814748 | 1.315361e-51 | -8.615850e-47 |
| Msa0123530 | Msa1100030 | 0.807199 | 5.681231e-50 | -8.615850e-47 |
| Msa0123530 | Msa1100330 | 0.814844 | 1.252650e-51 | -8.615850e-47 |
| Msa0123530 | Msa1106680 | 0.836851 | 7.342728e-57 | -8.615850e-47 |
| Msa0123530 | Msa1106960 | 0.838436 | 2.878403e-57 | -8.615850e-47 |
| Msa0123530 | Msa1108560 | 0.812462 | 4.187943e-51 | -8.615850e-47 |
| Msa0123530 | Msa1109880 | 0.844931 | 5.566938e-59 | -8.615850e-47 |
| Msa0123530 | Msa1109890 | 0.816231 | 6.152129e-52 | -8.615850e-47 |
| Msa0123530 | Msa1123000 | 0.801449 | 8.959136e-49 | -8.615850e-47 |
| Msa0123530 | Msa1138110 | 0.845413 | 4.125530e-59 | -8.615850e-47 |
| Msa0123530 | Msa1147030 | 0.809511 | 1.825534e-50 | -8.615850e-47 |
| Msa0123530 | Msa1148210 | 0.811257 | 7.663540e-51 | -8.615850e-47 |
| Msa0123530 | Msa1153690 | 0.810917 | 9.081857e-51 | -8.615850e-47 |
| Msa0123530 | Msa1156240 | 0.822774 | 1.978263e-53 | -8.615850e-47 |
| Msa0123530 | Msa1157210 | 0.800578 | 1.349792e-48 | -8.615850e-47 |
| Msa0123530 | Msa1162430 | 0.801299 | 9.614331e-49 | -8.615850e-47 |
| Msa0123530 | Msa1164230 | 0.804547 | 2.049864e-49 | -8.615850e-47 |
| Msa0123530 | Msa1167960 | 0.835397 | 1.718836e-56 | -8.615850e-47 |
| Msa0123530 | Msa1170340 | 0.829762 | 4.292669e-55 | -8.615850e-47 |
| Msa0123530 | Msa1181090 | 0.836694 | 8.055391e-57 | -8.615850e-47 |
| Msa0123530 | Msa1191350 | 0.801400 | 9.168414e-49 | -8.615850e-47 |
| Msa0123530 | Msa1214960 | 0.809167 | 2.162743e-50 | -8.615850e-47 |
| Msa0123530 | Msa1223960 | 0.801828 | 7.488221e-49 | -8.615850e-47 |
| Msa0123530 | Msa1223990 | 0.802180 | 6.340161e-49 | -8.615850e-47 |
| Msa0123530 | Msa1231720 | 0.804283 | 2.326358e-49 | -8.615850e-47 |
| Msa0123530 | Msa1236680 | 0.812391 | 4.339958e-51 | -8.615850e-47 |
| Msa0123530 | Msa1238250 | 0.803701 | 3.074793e-49 | -8.615850e-47 |
| Msa0123530 | Msa1240710 | 0.822060 | 2.899417e-53 | -8.615850e-47 |
| Msa0123530 | Msa1263110 | 0.805695 | 1.179118e-49 | -8.615850e-47 |
| Msa0123530 | Msa1263120 | 0.801216 | 9.995089e-49 | -8.615850e-47 |
| Msa0123530 | Msa1269050 | 0.814944 | 1.190462e-51 | -8.615850e-47 |
| Msa0123530 | Msa1300610 | 0.806580 | 7.678688e-50 | -8.615850e-47 |
| Msa0123530 | Msa1319190 | 0.803930 | 2.755803e-49 | -8.615850e-47 |
| Msa0123530 | Msa1322500 | 0.809531 | 1.807000e-50 | -8.615850e-47 |
| Msa0123530 | Msa1323030 | 0.815861 | 7.441057e-52 | -8.615850e-47 |
| Msa0123530 | Msa1323120 | 0.828522 | 8.580618e-55 | -8.615850e-47 |
| Msa0123530 | Msa1329740 | 0.803780 | 2.961269e-49 | -8.615850e-47 |
| Msa0123530 | Msa1355340 | 0.853448 | 2.373571e-61 | -8.615850e-47 |
| Msa0123530 | Msa1357840 | 0.813786 | 2.145878e-51 | -8.615850e-47 |
| Msa0123530 | Msa1373560 | 0.812945 | 3.284318e-51 | -8.615850e-47 |
| Msa0123530 | Msa1376070 | 0.816398 | 5.645992e-52 | -8.615850e-47 |
| Msa0123530 | Msa1377520 | 0.817821 | 2.702938e-52 | -8.615850e-47 |
| Msa0123530 | Msa1380740 | 0.809546 | 1.793456e-50 | -8.615850e-47 |
| Msa0123530 | Msa1406840 | 0.815747 | 7.888228e-52 | -8.615850e-47 |
| Msa0123530 | Msa1409600 | 0.807410 | 5.123078e-50 | -8.615850e-47 |
| Msa0123530 | Msa1411550 | 0.844967 | 5.443432e-59 | -8.615850e-47 |
| Msa0123530 | Msa1431160 | 0.809739 | 1.630457e-50 | -8.615850e-47 |
| Msa0123530 | Msa1445900 | 0.845431 | 4.078217e-59 | -8.615850e-47 |
| Msa0123530 | Msa1453650 | 0.815927 | 7.193156e-52 | -8.615850e-47 |
| Msa0123530 | Msa1459610 | 0.825123 | 5.563615e-54 | -8.615850e-47 |
| Msa0123530 | Msa1462610 | 0.808383 | 3.182444e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123530 | MtrunA17_Chr1g0184271 | 95.726 | 234 | 5 | 1 | 1 | 229 | 1 | 234 | 4.37e-170 | 467 |
| Msa0123530 | MtrunA17_Chr7g0261031 | 66.216 | 222 | 60 | 7 | 7 | 219 | 3 | 218 | 7.57e-94 | 274 |
| Msa0123530 | MtrunA17_Chr7g0260971 | 70.339 | 118 | 33 | 1 | 1 | 116 | 1 | 118 | 2.48e-55 | 176 |
| Msa0123530 | MtrunA17_Chr8g0351701 | 70.874 | 103 | 30 | 0 | 12 | 114 | 23 | 125 | 8.22e-52 | 167 |
| Msa0123530 | MtrunA17_Chr7g0245871 | 66.667 | 111 | 31 | 1 | 12 | 122 | 27 | 131 | 1.86e-50 | 164 |
| Msa0123530 | MtrunA17_Chr5g0435641 | 70.000 | 100 | 30 | 0 | 10 | 109 | 5 | 104 | 9.10e-50 | 161 |
| Msa0123530 | MtrunA17_Chr1g0184281 | 69.524 | 105 | 32 | 0 | 8 | 112 | 11 | 115 | 3.66e-49 | 160 |
| Msa0123530 | MtrunA17_Chr8g0351721 | 63.810 | 105 | 38 | 0 | 10 | 114 | 16 | 120 | 5.56e-49 | 159 |
| Msa0123530 | MtrunA17_Chr6g0460951 | 45.503 | 189 | 90 | 4 | 11 | 193 | 39 | 220 | 1.50e-47 | 156 |
| Msa0123530 | MtrunA17_Chr7g0245861 | 66.667 | 93 | 29 | 2 | 9 | 99 | 9 | 101 | 3.39e-41 | 137 |
| Msa0123530 | MtrunA17_Chr3g0114061 | 45.517 | 145 | 70 | 5 | 11 | 151 | 7 | 146 | 7.98e-36 | 124 |
| Msa0123530 | MtrunA17_Chr7g0227511 | 41.954 | 174 | 91 | 3 | 1 | 166 | 1 | 172 | 6.35e-35 | 122 |
| Msa0123530 | MtrunA17_Chr2g0311601 | 57.732 | 97 | 40 | 1 | 11 | 107 | 12 | 107 | 1.03e-34 | 121 |
| Msa0123530 | MtrunA17_Chr5g0437571 | 58.163 | 98 | 38 | 2 | 11 | 107 | 5 | 100 | 6.34e-34 | 119 |
| Msa0123530 | MtrunA17_Chr5g0438091 | 49.558 | 113 | 54 | 2 | 1 | 112 | 28 | 138 | 6.36e-34 | 120 |
| Msa0123530 | MtrunA17_Chr4g0043421 | 52.381 | 105 | 49 | 1 | 9 | 113 | 12 | 115 | 9.67e-34 | 119 |
| Msa0123530 | MtrunA17_Chr4g0058651 | 46.923 | 130 | 63 | 2 | 11 | 140 | 10 | 133 | 1.44e-33 | 119 |
| Msa0123530 | MtrunA17_Chr5g0437401 | 50.467 | 107 | 52 | 1 | 9 | 115 | 8 | 113 | 1.82e-33 | 119 |
| Msa0123530 | MtrunA17_Chr3g0106101 | 54.000 | 100 | 45 | 1 | 8 | 107 | 3 | 101 | 1.98e-33 | 118 |
| Msa0123530 | MtrunA17_Chr3g0117121 | 54.717 | 106 | 45 | 2 | 1 | 106 | 1 | 103 | 2.89e-33 | 119 |
| Msa0123530 | MtrunA17_Chr6g0460941 | 59.091 | 88 | 36 | 0 | 12 | 99 | 7 | 94 | 4.77e-32 | 112 |
| Msa0123530 | MtrunA17_Chr3g0097221 | 52.336 | 107 | 50 | 1 | 8 | 114 | 3 | 108 | 5.37e-32 | 118 |
| Msa0123530 | MtrunA17_Chr3g0129071 | 49.550 | 111 | 53 | 2 | 1 | 110 | 36 | 144 | 6.15e-32 | 116 |
| Msa0123530 | MtrunA17_Chr6g0449641 | 51.887 | 106 | 47 | 2 | 1 | 106 | 1 | 102 | 3.29e-31 | 112 |
| Msa0123530 | MtrunA17_Chr4g0030001 | 39.375 | 160 | 85 | 4 | 11 | 162 | 23 | 178 | 3.99e-31 | 113 |
| Msa0123530 | MtrunA17_Chr3g0115431 | 51.923 | 104 | 49 | 1 | 11 | 114 | 8 | 110 | 4.20e-31 | 114 |
| Msa0123530 | MtrunA17_Chr5g0402611 | 52.294 | 109 | 51 | 1 | 6 | 114 | 2 | 109 | 4.88e-31 | 116 |
| Msa0123530 | MtrunA17_Chr3g0113891 | 49.515 | 103 | 51 | 1 | 9 | 111 | 11 | 112 | 8.23e-31 | 112 |
| Msa0123530 | MtrunA17_Chr6g0449651 | 50.000 | 106 | 50 | 2 | 1 | 106 | 58 | 160 | 3.17e-29 | 108 |
| Msa0123530 | MtrunA17_Chr1g0200201 | 51.485 | 101 | 46 | 2 | 13 | 113 | 73 | 170 | 3.19e-28 | 106 |
| Msa0123530 | MtrunA17_Chr5g0432451 | 52.747 | 91 | 40 | 2 | 3 | 92 | 34 | 122 | 1.50e-26 | 102 |
| Msa0123530 | MtrunA17_Chr7g0225111 | 45.192 | 104 | 56 | 1 | 11 | 114 | 4 | 106 | 1.26e-25 | 96.7 |
| Msa0123530 | MtrunA17_Chr8g0353981 | 54.651 | 86 | 38 | 1 | 7 | 92 | 2 | 86 | 1.33e-25 | 99.8 |
| Msa0123530 | MtrunA17_Chr5g0444351 | 38.571 | 140 | 77 | 4 | 13 | 144 | 6 | 144 | 1.72e-24 | 94.7 |
| Msa0123530 | MtrunA17_Chr8g0374591 | 43.269 | 104 | 58 | 1 | 12 | 115 | 8 | 110 | 1.26e-20 | 84.0 |
| Msa0123530 | MtrunA17_Chr8g0374601 | 39.423 | 104 | 62 | 1 | 12 | 115 | 26 | 128 | 2.21e-19 | 84.3 |
| Msa0123530 | MtrunA17_Chr8g0342351 | 37.255 | 102 | 63 | 1 | 13 | 114 | 13 | 113 | 1.69e-18 | 81.6 |
| Msa0123530 | MtrunA17_Chr4g0059901 | 39.000 | 100 | 60 | 1 | 13 | 112 | 11 | 109 | 3.14e-18 | 80.9 |
| Msa0123530 | MtrunA17_Chr6g0452691 | 39.080 | 87 | 51 | 2 | 7 | 92 | 4 | 89 | 3.19e-16 | 73.9 |
| Msa0123530 | MtrunA17_Chr6g0452661 | 35.897 | 117 | 70 | 4 | 7 | 119 | 4 | 119 | 4.38e-16 | 74.7 |
| Msa0123530 | MtrunA17_Chr8g0374581 | 38.000 | 100 | 60 | 2 | 12 | 110 | 8 | 106 | 4.55e-16 | 74.3 |
| Msa0123530 | MtrunA17_Chr2g0330201 | 33.333 | 102 | 67 | 1 | 13 | 114 | 20 | 120 | 6.03e-16 | 75.1 |
| Msa0123530 | MtrunA17_Chr6g0452671 | 34.579 | 107 | 66 | 2 | 13 | 116 | 12 | 117 | 1.81e-15 | 72.4 |
| Msa0123530 | MtrunA17_Chr4g0040831 | 27.586 | 174 | 110 | 4 | 13 | 186 | 16 | 173 | 4.49e-15 | 71.2 |
| Msa0123530 | MtrunA17_Chr2g0326041 | 54.167 | 48 | 21 | 1 | 11 | 58 | 32 | 78 | 1.25e-12 | 61.6 |
| Msa0123530 | MtrunA17_Chr5g0439111 | 31.613 | 155 | 88 | 7 | 13 | 154 | 10 | 159 | 2.30e-12 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0123530 | AT3G58190.1 | 52.941 | 221 | 83 | 5 | 12 | 228 | 11 | 214 | 2.49e-70 | 214 |
| Msa0123530 | AT2G42440.1 | 71.324 | 136 | 36 | 2 | 7 | 141 | 2 | 135 | 7.09e-65 | 201 |
| Msa0123530 | AT2G31310.1 | 53.179 | 173 | 67 | 3 | 10 | 181 | 5 | 164 | 3.45e-59 | 185 |
| Msa0123530 | AT2G42430.1 | 71.795 | 117 | 30 | 1 | 1 | 114 | 1 | 117 | 2.75e-56 | 179 |
| Msa0123530 | AT4G00210.1 | 56.934 | 137 | 56 | 2 | 4 | 137 | 2 | 138 | 2.27e-50 | 164 |
| Msa0123530 | AT3G03760.1 | 69.608 | 102 | 31 | 0 | 11 | 112 | 50 | 151 | 1.13e-49 | 164 |
| Msa0123530 | AT2G45420.1 | 71.000 | 100 | 29 | 0 | 15 | 114 | 40 | 139 | 3.69e-49 | 162 |
| Msa0123530 | AT5G06080.1 | 67.619 | 105 | 34 | 0 | 8 | 112 | 3 | 107 | 1.19e-48 | 158 |
| Msa0123530 | AT4G00220.1 | 71.000 | 100 | 29 | 0 | 15 | 114 | 20 | 119 | 2.18e-48 | 159 |
| Msa0123530 | AT2G45410.1 | 62.500 | 96 | 36 | 0 | 15 | 110 | 19 | 114 | 3.71e-42 | 142 |
| Msa0123530 | AT3G27650.1 | 56.250 | 96 | 41 | 1 | 11 | 106 | 38 | 132 | 3.08e-33 | 118 |
| Msa0123530 | AT5G63090.4 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.69e-33 | 118 |
| Msa0123530 | AT5G63090.3 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.69e-33 | 118 |
| Msa0123530 | AT5G63090.2 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.69e-33 | 118 |
| Msa0123530 | AT5G63090.1 | 56.604 | 106 | 44 | 2 | 1 | 106 | 1 | 104 | 3.69e-33 | 118 |
| Msa0123530 | AT2G30130.1 | 52.336 | 107 | 46 | 2 | 1 | 107 | 1 | 102 | 6.71e-32 | 115 |
| Msa0123530 | AT1G07900.1 | 53.608 | 97 | 44 | 1 | 11 | 107 | 32 | 127 | 3.33e-31 | 113 |
| Msa0123530 | AT1G16530.1 | 42.969 | 128 | 71 | 2 | 11 | 137 | 13 | 139 | 3.83e-31 | 112 |
| Msa0123530 | AT3G11090.1 | 42.222 | 135 | 76 | 2 | 9 | 143 | 8 | 140 | 9.43e-31 | 111 |
| Msa0123530 | AT2G28500.1 | 53.608 | 97 | 44 | 1 | 11 | 107 | 54 | 149 | 2.04e-30 | 112 |
| Msa0123530 | AT1G31320.1 | 50.515 | 97 | 47 | 1 | 3 | 99 | 4 | 99 | 4.75e-30 | 110 |
| Msa0123530 | AT5G66870.1 | 52.336 | 107 | 50 | 1 | 8 | 114 | 3 | 108 | 1.36e-29 | 112 |
| Msa0123530 | AT2G30340.1 | 46.218 | 119 | 61 | 2 | 6 | 123 | 46 | 162 | 2.22e-29 | 111 |
| Msa0123530 | AT2G30340.2 | 46.218 | 119 | 61 | 2 | 6 | 123 | 47 | 163 | 2.41e-29 | 110 |
| Msa0123530 | AT2G23660.2 | 50.000 | 102 | 50 | 1 | 11 | 112 | 4 | 104 | 8.03e-28 | 107 |
| Msa0123530 | AT2G23660.3 | 50.000 | 102 | 50 | 1 | 11 | 112 | 4 | 104 | 8.03e-28 | 107 |
| Msa0123530 | AT2G23660.1 | 50.000 | 102 | 50 | 1 | 11 | 112 | 4 | 104 | 8.03e-28 | 107 |
| Msa0123530 | AT1G65620.1 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.15e-27 | 103 |
| Msa0123530 | AT1G65620.4 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.15e-27 | 103 |
| Msa0123530 | AT1G65620.3 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.15e-27 | 103 |
| Msa0123530 | AT1G65620.5 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.15e-27 | 103 |
| Msa0123530 | AT1G65620.2 | 58.696 | 92 | 34 | 2 | 1 | 92 | 1 | 88 | 2.15e-27 | 103 |
| Msa0123530 | AT2G40470.2 | 52.809 | 89 | 39 | 2 | 5 | 92 | 13 | 99 | 7.88e-27 | 102 |
| Msa0123530 | AT3G26660.1 | 43.137 | 102 | 57 | 1 | 13 | 114 | 6 | 106 | 8.92e-27 | 100 |
| Msa0123530 | AT2G40470.1 | 52.809 | 89 | 39 | 2 | 5 | 92 | 38 | 124 | 9.09e-27 | 103 |
| Msa0123530 | AT3G26620.1 | 43.137 | 102 | 57 | 1 | 13 | 114 | 6 | 106 | 1.51e-26 | 99.8 |
| Msa0123530 | AT3G50510.1 | 36.842 | 152 | 85 | 3 | 11 | 158 | 11 | 155 | 7.66e-25 | 97.4 |
| Msa0123530 | AT3G50510.2 | 36.842 | 152 | 85 | 3 | 11 | 158 | 11 | 155 | 7.66e-25 | 97.4 |
| Msa0123530 | AT3G13850.1 | 38.596 | 114 | 60 | 3 | 13 | 118 | 37 | 148 | 1.75e-18 | 82.0 |
| Msa0123530 | AT5G35900.1 | 39.216 | 102 | 61 | 1 | 13 | 114 | 6 | 106 | 2.54e-16 | 75.1 |
| Msa0123530 | AT1G72980.1 | 36.364 | 110 | 69 | 1 | 3 | 112 | 4 | 112 | 4.46e-16 | 74.7 |
| Msa0123530 | AT1G06280.1 | 38.667 | 75 | 45 | 1 | 13 | 87 | 25 | 98 | 1.25e-13 | 67.8 |
| Msa0123530 | AT3G47870.1 | 34.375 | 96 | 60 | 2 | 1 | 96 | 27 | 119 | 1.42e-13 | 69.3 |
Find 36 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGACTTCAAGATCCTATTTA+TGG | 0.149642 | 1_3:+50721080 | Msa0123530:CDS |
| TCCCTAACAACACAATATTA+TGG | 0.175683 | 1_3:+50721562 | Msa0123530:CDS |
| TTGCCCAAGTTGGTGATTAT+TGG | 0.182263 | 1_3:-50721509 | None:intergenic |
| GACCTACATTCAGTGGCTTT+TGG | 0.265454 | 1_3:+50721721 | Msa0123530:CDS |
| AGTTCTGGTTCTGTTTCTTC+TGG | 0.281584 | 1_3:+50720849 | Msa0123530:CDS |
| TCCCATAATATTGTGTTGTT+AGG | 0.288317 | 1_3:-50721564 | None:intergenic |
| TGTGAAACACATCCATAAAT+AGG | 0.289533 | 1_3:-50721092 | None:intergenic |
| CCCTAACAACACAATATTAT+GGG | 0.308981 | 1_3:+50721563 | Msa0123530:CDS |
| GCTTCGCAACGATCACTTAC+AGG | 0.338863 | 1_3:-50721026 | None:intergenic |
| CCCATAATATTGTGTTGTTA+GGG | 0.384449 | 1_3:-50721563 | None:intergenic |
| TTGAGAAGAAAATGTATAAG+AGG | 0.389833 | 1_3:+50720897 | Msa0123530:CDS |
| TCGACTAAGATGGCTAGTTC+TGG | 0.422046 | 1_3:+50720834 | None:intergenic |
| GTTTCTTCTGGTTCTCCTTG+TGG | 0.446139 | 1_3:+50720861 | Msa0123530:CDS |
| GGTCAATTTACAAACACAAC+TGG | 0.458520 | 1_3:+50721360 | Msa0123530:CDS |
| GAAATTAAGAAACCTGTTGT+TGG | 0.459258 | 1_3:-50721127 | None:intergenic |
| AATTCCAATAATCACCAACT+TGG | 0.477226 | 1_3:+50721505 | Msa0123530:CDS |
| TTGAGGAGATGGAAACAAAC+AGG | 0.496303 | 1_3:+50721671 | Msa0123530:CDS |
| TCCCTCAAGATCTTCAAACT+TGG | 0.513604 | 1_3:+50721470 | Msa0123530:CDS |
| TAAGAAATTCTTGCCCAAGT+TGG | 0.515236 | 1_3:-50721519 | None:intergenic |
| ATTAAGAAACCTGTTGTTGG+AGG | 0.525469 | 1_3:-50721124 | None:intergenic |
| TGGAAACAAACAGGAGGACA+TGG | 0.530351 | 1_3:+50721680 | Msa0123530:CDS |
| ACATGGATCTAGACCCTATG+AGG | 0.533013 | 1_3:+50721599 | Msa0123530:CDS |
| AACCAAGTTTGAAGATCTTG+AGG | 0.542420 | 1_3:-50721472 | None:intergenic |
| ACCAAGTTTGAAGATCTTGA+GGG | 0.556027 | 1_3:-50721471 | None:intergenic |
| ATGGGGATTTGATGAAGTTG+AGG | 0.564323 | 1_3:+50721699 | Msa0123530:CDS |
| ATTCCAATAATCACCAACTT+GGG | 0.570241 | 1_3:+50721506 | Msa0123530:CDS |
| TTAAGAAACCTGTTGTTGGA+GGG | 0.580635 | 1_3:-50721123 | None:intergenic |
| CTTCGCAACGATCACTTACA+GGG | 0.583775 | 1_3:-50721025 | None:intergenic |
| GGAAACAAACAGGAGGACAT+GGG | 0.607981 | 1_3:+50721681 | Msa0123530:CDS |
| AGTTGAGGACCTACATTCAG+TGG | 0.617361 | 1_3:+50721714 | Msa0123530:CDS |
| TTCATAAGAGATTGTAACAG+CGG | 0.623464 | 1_3:-50721048 | None:intergenic |
| TCTTCAAACTTGGTTCCATG+TGG | 0.625091 | 1_3:+50721480 | Msa0123530:CDS |
| ATCCAAAAGCCACTGAATGT+AGG | 0.630404 | 1_3:-50721723 | None:intergenic |
| GAAACAAACAGGAGGACATG+GGG | 0.658640 | 1_3:+50721682 | Msa0123530:CDS |
| TGGGAACAATACTCTCAACA+TGG | 0.666386 | 1_3:+50721582 | Msa0123530:CDS |
| AGGAGATGGAAACAAACAGG+AGG | 0.707810 | 1_3:+50721674 | Msa0123530:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAAAAATAATGAGA+AGG | - | chr1_3:50721152-50721171 | None:intergenic | 10.0% |
| !! | ATAATAAAAAAATAATGAGA+AGG | - | chr1_3:50721152-50721171 | None:intergenic | 10.0% |
| !! | ATAAACCAAATAAAAAAACA+AGG | + | chr1_3:50721246-50721265 | Msa0123530:intron | 15.0% |
| !! | ATAAACCAAATAAAAAAACA+AGG | + | chr1_3:50721246-50721265 | Msa0123530:intron | 15.0% |
| !!! | TTTTTATTTGGTTTATGTCA+TGG | - | chr1_3:50721242-50721261 | None:intergenic | 20.0% |
| !!! | TTGAACCTTGTTTTTTTATT+TGG | - | chr1_3:50721254-50721273 | None:intergenic | 20.0% |
| !!! | GAGAATTAGATTTTTCATTA+GGG | - | chr1_3:50721444-50721463 | None:intergenic | 20.0% |
| !!! | AGAGAATTAGATTTTTCATT+AGG | - | chr1_3:50721445-50721464 | None:intergenic | 20.0% |
| !!! | AATTTTCATAATTCCTCATA+GGG | - | chr1_3:50721615-50721634 | None:intergenic | 20.0% |
| !!! | TTTTTATTTGGTTTATGTCA+TGG | - | chr1_3:50721242-50721261 | None:intergenic | 20.0% |
| !!! | TTGAACCTTGTTTTTTTATT+TGG | - | chr1_3:50721254-50721273 | None:intergenic | 20.0% |
| !!! | GAGAATTAGATTTTTCATTA+GGG | - | chr1_3:50721444-50721463 | None:intergenic | 20.0% |
| !!! | AGAGAATTAGATTTTTCATT+AGG | - | chr1_3:50721445-50721464 | None:intergenic | 20.0% |
| !!! | AATTTTCATAATTCCTCATA+GGG | - | chr1_3:50721615-50721634 | None:intergenic | 20.0% |
| !! | TTTTCTTCTCAAAAATTTGC+AGG | - | chr1_3:50720889-50720908 | None:intergenic | 25.0% |
| ! | TTGAGAAGAAAATGTATAAG+AGG | + | chr1_3:50720897-50720916 | Msa0123530:CDS | 25.0% |
| !!! | GCAATTGATTTTGATTTTGT+AGG | + | chr1_3:50721336-50721355 | Msa0123530:intron | 25.0% |
| !!! | ATTGATTTTGATTTTGTAGG+TGG | + | chr1_3:50721339-50721358 | Msa0123530:intron | 25.0% |
| !! | TTTTTCATTAGGGTTTTCAT+TGG | - | chr1_3:50721434-50721453 | None:intergenic | 25.0% |
| !! | GAATTTTCATAATTCCTCAT+AGG | - | chr1_3:50721616-50721635 | None:intergenic | 25.0% |
| !! | TTTTCTTCTCAAAAATTTGC+AGG | - | chr1_3:50720889-50720908 | None:intergenic | 25.0% |
| ! | TTGAGAAGAAAATGTATAAG+AGG | + | chr1_3:50720897-50720916 | Msa0123530:CDS | 25.0% |
| !!! | GCAATTGATTTTGATTTTGT+AGG | + | chr1_3:50721336-50721355 | Msa0123530:intron | 25.0% |
| !!! | ATTGATTTTGATTTTGTAGG+TGG | + | chr1_3:50721339-50721358 | Msa0123530:intron | 25.0% |
| !! | TTTTTCATTAGGGTTTTCAT+TGG | - | chr1_3:50721434-50721453 | None:intergenic | 25.0% |
| !! | GAATTTTCATAATTCCTCAT+AGG | - | chr1_3:50721616-50721635 | None:intergenic | 25.0% |
| CCTTGTTCATGAGAAAAATA+AGG | - | chr1_3:50720936-50720955 | None:intergenic | 30.0% | |
| !!! | CCTTATTTTTCTCATGAACA+AGG | + | chr1_3:50720933-50720952 | Msa0123530:CDS | 30.0% |
| !! | ACATTTTTCAGCCATTCATA+AGG | + | chr1_3:50720962-50720981 | Msa0123530:CDS | 30.0% |
| TTCATAAGAGATTGTAACAG+CGG | - | chr1_3:50721051-50721070 | None:intergenic | 30.0% | |
| AGACTTCAAGATCCTATTTA+TGG | + | chr1_3:50721080-50721099 | Msa0123530:CDS | 30.0% | |
| TGTGAAACACATCCATAAAT+AGG | - | chr1_3:50721095-50721114 | None:intergenic | 30.0% | |
| GAAATTAAGAAACCTGTTGT+TGG | - | chr1_3:50721130-50721149 | None:intergenic | 30.0% | |
| ! | GATTATTGGAATTTTCCACA+TGG | - | chr1_3:50721498-50721517 | None:intergenic | 30.0% |
| AATTCCAATAATCACCAACT+TGG | + | chr1_3:50721505-50721524 | Msa0123530:CDS | 30.0% | |
| ATTCCAATAATCACCAACTT+GGG | + | chr1_3:50721506-50721525 | Msa0123530:CDS | 30.0% | |
| TCCCTAACAACACAATATTA+TGG | + | chr1_3:50721562-50721581 | Msa0123530:CDS | 30.0% | |
| ! | CCCATAATATTGTGTTGTTA+GGG | - | chr1_3:50721566-50721585 | None:intergenic | 30.0% |
| CCCTAACAACACAATATTAT+GGG | + | chr1_3:50721563-50721582 | Msa0123530:CDS | 30.0% | |
| ! | TCCCATAATATTGTGTTGTT+AGG | - | chr1_3:50721567-50721586 | None:intergenic | 30.0% |
| CCTTGTTCATGAGAAAAATA+AGG | - | chr1_3:50720936-50720955 | None:intergenic | 30.0% | |
| !!! | CCTTATTTTTCTCATGAACA+AGG | + | chr1_3:50720933-50720952 | Msa0123530:CDS | 30.0% |
| !! | ACATTTTTCAGCCATTCATA+AGG | + | chr1_3:50720962-50720981 | Msa0123530:CDS | 30.0% |
| TTCATAAGAGATTGTAACAG+CGG | - | chr1_3:50721051-50721070 | None:intergenic | 30.0% | |
| AGACTTCAAGATCCTATTTA+TGG | + | chr1_3:50721080-50721099 | Msa0123530:CDS | 30.0% | |
| TGTGAAACACATCCATAAAT+AGG | - | chr1_3:50721095-50721114 | None:intergenic | 30.0% | |
| GAAATTAAGAAACCTGTTGT+TGG | - | chr1_3:50721130-50721149 | None:intergenic | 30.0% | |
| ! | GATTATTGGAATTTTCCACA+TGG | - | chr1_3:50721498-50721517 | None:intergenic | 30.0% |
| AATTCCAATAATCACCAACT+TGG | + | chr1_3:50721505-50721524 | Msa0123530:CDS | 30.0% | |
| ATTCCAATAATCACCAACTT+GGG | + | chr1_3:50721506-50721525 | Msa0123530:CDS | 30.0% | |
| TCCCTAACAACACAATATTA+TGG | + | chr1_3:50721562-50721581 | Msa0123530:CDS | 30.0% | |
| ! | CCCATAATATTGTGTTGTTA+GGG | - | chr1_3:50721566-50721585 | None:intergenic | 30.0% |
| CCCTAACAACACAATATTAT+GGG | + | chr1_3:50721563-50721582 | Msa0123530:CDS | 30.0% | |
| ! | TCCCATAATATTGTGTTGTT+AGG | - | chr1_3:50721567-50721586 | None:intergenic | 30.0% |
| ! | TCAGCCATTCATAAGGTTTT+TGG | + | chr1_3:50720969-50720988 | Msa0123530:CDS | 35.0% |
| TGCACCAAAAACCTTATGAA+TGG | - | chr1_3:50720976-50720995 | None:intergenic | 35.0% | |
| TTAAGAAACCTGTTGTTGGA+GGG | - | chr1_3:50721126-50721145 | None:intergenic | 35.0% | |
| ATTAAGAAACCTGTTGTTGG+AGG | - | chr1_3:50721127-50721146 | None:intergenic | 35.0% | |
| GGTCAATTTACAAACACAAC+TGG | + | chr1_3:50721360-50721379 | Msa0123530:CDS | 35.0% | |
| ACCAAGTTTGAAGATCTTGA+GGG | - | chr1_3:50721474-50721493 | None:intergenic | 35.0% | |
| AACCAAGTTTGAAGATCTTG+AGG | - | chr1_3:50721475-50721494 | None:intergenic | 35.0% | |
| TAAGAAATTCTTGCCCAAGT+TGG | - | chr1_3:50721522-50721541 | None:intergenic | 35.0% | |
| !!! | CACTTCATTTTCTAGCTTTG+AGG | + | chr1_3:50721654-50721673 | Msa0123530:CDS | 35.0% |
| !!! | ATTTTCTAGCTTTGAGGAGA+TGG | + | chr1_3:50721660-50721679 | Msa0123530:CDS | 35.0% |
| ! | TCAGCCATTCATAAGGTTTT+TGG | + | chr1_3:50720969-50720988 | Msa0123530:CDS | 35.0% |
| TGCACCAAAAACCTTATGAA+TGG | - | chr1_3:50720976-50720995 | None:intergenic | 35.0% | |
| TTAAGAAACCTGTTGTTGGA+GGG | - | chr1_3:50721126-50721145 | None:intergenic | 35.0% | |
| ATTAAGAAACCTGTTGTTGG+AGG | - | chr1_3:50721127-50721146 | None:intergenic | 35.0% | |
| GGTCAATTTACAAACACAAC+TGG | + | chr1_3:50721360-50721379 | Msa0123530:CDS | 35.0% | |
| ACCAAGTTTGAAGATCTTGA+GGG | - | chr1_3:50721474-50721493 | None:intergenic | 35.0% | |
| AACCAAGTTTGAAGATCTTG+AGG | - | chr1_3:50721475-50721494 | None:intergenic | 35.0% | |
| TAAGAAATTCTTGCCCAAGT+TGG | - | chr1_3:50721522-50721541 | None:intergenic | 35.0% | |
| !!! | CACTTCATTTTCTAGCTTTG+AGG | + | chr1_3:50721654-50721673 | Msa0123530:CDS | 35.0% |
| !!! | ATTTTCTAGCTTTGAGGAGA+TGG | + | chr1_3:50721660-50721679 | Msa0123530:CDS | 35.0% |
| !! | AGTTCTGGTTCTGTTTCTTC+TGG | + | chr1_3:50720849-50720868 | Msa0123530:CDS | 40.0% |
| AAAAATTTGCAGGCTCCACA+AGG | - | chr1_3:50720879-50720898 | None:intergenic | 40.0% | |
| !! | TATTTTTGCCCTCCAACAAC+AGG | + | chr1_3:50721115-50721134 | Msa0123530:CDS | 40.0% |
| TCCCTCAAGATCTTCAAACT+TGG | + | chr1_3:50721470-50721489 | Msa0123530:CDS | 40.0% | |
| TCTTCAAACTTGGTTCCATG+TGG | + | chr1_3:50721480-50721499 | Msa0123530:CDS | 40.0% | |
| !! | TTGCCCAAGTTGGTGATTAT+TGG | - | chr1_3:50721512-50721531 | None:intergenic | 40.0% |
| TGGGAACAATACTCTCAACA+TGG | + | chr1_3:50721582-50721601 | Msa0123530:CDS | 40.0% | |
| TTGAGGAGATGGAAACAAAC+AGG | + | chr1_3:50721671-50721690 | Msa0123530:CDS | 40.0% | |
| ATGGGGATTTGATGAAGTTG+AGG | + | chr1_3:50721699-50721718 | Msa0123530:CDS | 40.0% | |
| ATCCAAAAGCCACTGAATGT+AGG | - | chr1_3:50721726-50721745 | None:intergenic | 40.0% | |
| !! | AGTTCTGGTTCTGTTTCTTC+TGG | + | chr1_3:50720849-50720868 | Msa0123530:CDS | 40.0% |
| AAAAATTTGCAGGCTCCACA+AGG | - | chr1_3:50720879-50720898 | None:intergenic | 40.0% | |
| !! | TATTTTTGCCCTCCAACAAC+AGG | + | chr1_3:50721115-50721134 | Msa0123530:CDS | 40.0% |
| TCCCTCAAGATCTTCAAACT+TGG | + | chr1_3:50721470-50721489 | Msa0123530:CDS | 40.0% | |
| TCTTCAAACTTGGTTCCATG+TGG | + | chr1_3:50721480-50721499 | Msa0123530:CDS | 40.0% | |
| !! | TTGCCCAAGTTGGTGATTAT+TGG | - | chr1_3:50721512-50721531 | None:intergenic | 40.0% |
| TGGGAACAATACTCTCAACA+TGG | + | chr1_3:50721582-50721601 | Msa0123530:CDS | 40.0% | |
| TTGAGGAGATGGAAACAAAC+AGG | + | chr1_3:50721671-50721690 | Msa0123530:CDS | 40.0% | |
| ATGGGGATTTGATGAAGTTG+AGG | + | chr1_3:50721699-50721718 | Msa0123530:CDS | 40.0% | |
| ATCCAAAAGCCACTGAATGT+AGG | - | chr1_3:50721726-50721745 | None:intergenic | 40.0% | |
| !! | GTTTCTTCTGGTTCTCCTTG+TGG | + | chr1_3:50720861-50720880 | Msa0123530:CDS | 45.0% |
| CTTCGCAACGATCACTTACA+GGG | - | chr1_3:50721028-50721047 | None:intergenic | 45.0% | |
| ACATGGATCTAGACCCTATG+AGG | + | chr1_3:50721599-50721618 | Msa0123530:CDS | 45.0% | |
| AGGAGATGGAAACAAACAGG+AGG | + | chr1_3:50721674-50721693 | Msa0123530:CDS | 45.0% | |
| TGGAAACAAACAGGAGGACA+TGG | + | chr1_3:50721680-50721699 | Msa0123530:CDS | 45.0% | |
| GGAAACAAACAGGAGGACAT+GGG | + | chr1_3:50721681-50721700 | Msa0123530:CDS | 45.0% | |
| GAAACAAACAGGAGGACATG+GGG | + | chr1_3:50721682-50721701 | Msa0123530:CDS | 45.0% | |
| AGTTGAGGACCTACATTCAG+TGG | + | chr1_3:50721714-50721733 | Msa0123530:CDS | 45.0% | |
| ! | GACCTACATTCAGTGGCTTT+TGG | + | chr1_3:50721721-50721740 | Msa0123530:CDS | 45.0% |
| !! | GTTTCTTCTGGTTCTCCTTG+TGG | + | chr1_3:50720861-50720880 | Msa0123530:CDS | 45.0% |
| CTTCGCAACGATCACTTACA+GGG | - | chr1_3:50721028-50721047 | None:intergenic | 45.0% | |
| ACATGGATCTAGACCCTATG+AGG | + | chr1_3:50721599-50721618 | Msa0123530:CDS | 45.0% | |
| AGGAGATGGAAACAAACAGG+AGG | + | chr1_3:50721674-50721693 | Msa0123530:CDS | 45.0% | |
| TGGAAACAAACAGGAGGACA+TGG | + | chr1_3:50721680-50721699 | Msa0123530:CDS | 45.0% | |
| GGAAACAAACAGGAGGACAT+GGG | + | chr1_3:50721681-50721700 | Msa0123530:CDS | 45.0% | |
| GAAACAAACAGGAGGACATG+GGG | + | chr1_3:50721682-50721701 | Msa0123530:CDS | 45.0% | |
| AGTTGAGGACCTACATTCAG+TGG | + | chr1_3:50721714-50721733 | Msa0123530:CDS | 45.0% | |
| ! | GACCTACATTCAGTGGCTTT+TGG | + | chr1_3:50721721-50721740 | Msa0123530:CDS | 45.0% |
| GCTTCGCAACGATCACTTAC+AGG | - | chr1_3:50721029-50721048 | None:intergenic | 50.0% | |
| GCTTCGCAACGATCACTTAC+AGG | - | chr1_3:50721029-50721048 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 50720843 | 50721753 | 50720843 | ID=Msa0123530;Name=Msa0123530 |
| chr1_3 | mRNA | 50720843 | 50721753 | 50720843 | ID=Msa0123530-mRNA-1;Parent=Msa0123530;Name=Msa0123530-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|229 |
| chr1_3 | exon | 50720843 | 50721136 | 50720843 | ID=Msa0123530-mRNA-1:exon:15475;Parent=Msa0123530-mRNA-1 |
| chr1_3 | exon | 50721358 | 50721753 | 50721358 | ID=Msa0123530-mRNA-1:exon:15476;Parent=Msa0123530-mRNA-1 |
| chr1_3 | CDS | 50720843 | 50721136 | 50720843 | ID=Msa0123530-mRNA-1:cds;Parent=Msa0123530-mRNA-1 |
| chr1_3 | CDS | 50721358 | 50721753 | 50721358 | ID=Msa0123530-mRNA-1:cds;Parent=Msa0123530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
