AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0870550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870550 MtrunA17_Chr6g0452111 92.005 788 59 2 4 791 490 1273 0.0 1484
Msa0870550 MtrunA17_Chr6g0452111 36.170 611 358 11 184 778 13 607 3.53e-108 359
Msa0870550 MtrunA17_Chr6g0452061 90.909 792 65 2 1 792 1 785 0.0 1445
Msa0870550 MtrunA17_Chr6g0452041 85.246 793 113 2 4 792 483 1275 0.0 1390
Msa0870550 MtrunA17_Chr6g0452041 36.000 575 357 6 209 778 32 600 4.55e-109 361
Msa0870550 MtrunA17_Chr6g0452171 87.786 786 89 3 13 792 492 1276 0.0 1381
Msa0870550 MtrunA17_Chr6g0452171 37.214 524 321 5 257 778 83 600 1.57e-105 352
Msa0870550 MtrunA17_Chr6g0452141 84.557 790 121 1 4 792 484 1273 0.0 1346
Msa0870550 MtrunA17_Chr6g0452141 38.113 530 308 8 257 778 84 601 8.05e-107 355
Msa0870550 MtrunA17_Chr6g0451881 79.770 781 148 3 13 792 492 1263 0.0 1278
Msa0870550 MtrunA17_Chr6g0451881 37.977 524 317 5 257 778 83 600 1.62e-108 360
Msa0870550 MtrunA17_Chr6g0451911 74.718 799 184 5 4 792 483 1273 0.0 1199
Msa0870550 MtrunA17_Chr6g0451911 34.584 613 367 9 183 778 5 600 3.06e-108 359
Msa0870550 MtrunA17_Chr7g0233901 65.553 778 249 3 4 779 479 1239 0.0 1053
Msa0870550 MtrunA17_Chr7g0233901 35.548 602 337 11 202 778 21 596 2.34e-103 345
Msa0870550 MtrunA17_Chr4g0041871 54.627 778 336 7 13 778 474 1246 0.0 851
Msa0870550 MtrunA17_Chr4g0041871 35.088 570 360 6 215 778 20 585 3.11e-102 342
Msa0870550 MtrunA17_Chr3g0123411 54.253 776 335 7 13 778 380 1145 0.0 840
Msa0870550 MtrunA17_Chr3g0123411 37.795 508 307 5 289 792 1 503 2.10e-93 317
Msa0870550 MtrunA17_Chr3g0123411 69.725 109 32 1 15 122 1038 1146 3.67e-38 153
Msa0870550 MtrunA17_Chr6g0452071 89.427 454 47 1 326 779 4 456 0.0 833
Msa0870550 MtrunA17_Chr6g0452071 62.037 108 40 1 15 121 348 455 9.33e-36 141
Msa0870550 MtrunA17_Chr6g0486841 52.021 767 349 5 13 777 490 1239 0.0 788
Msa0870550 MtrunA17_Chr6g0486841 38.258 528 309 8 257 777 80 597 5.87e-99 333
Msa0870550 MtrunA17_Chr7g0264631 44.246 782 417 8 13 785 557 1328 0.0 689
Msa0870550 MtrunA17_Chr7g0264631 36.967 633 371 8 166 777 40 665 5.93e-122 397
Msa0870550 MtrunA17_Chr5g0410921 46.875 768 382 9 13 779 487 1229 0.0 685
Msa0870550 MtrunA17_Chr5g0410921 36.526 616 365 11 180 781 1 604 4.75e-113 372
Msa0870550 MtrunA17_Chr5g0410921 62.609 115 43 0 13 127 1120 1234 4.27e-39 156
Msa0870550 MtrunA17_Chr6g0453051 43.862 782 415 7 4 779 485 1248 0.0 672
Msa0870550 MtrunA17_Chr6g0453051 39.763 591 347 5 191 777 15 600 2.08e-126 408
Msa0870550 MtrunA17_Chr1g0180601 44.444 783 421 7 13 788 530 1305 0.0 666
Msa0870550 MtrunA17_Chr1g0180601 37.625 598 367 4 183 777 44 638 8.48e-122 397
Msa0870550 MtrunA17_Chr4g0069401 45.198 781 414 8 6 777 497 1272 0.0 650
Msa0870550 MtrunA17_Chr4g0069401 36.557 610 378 8 171 777 8 611 2.24e-115 379
Msa0870550 MtrunA17_Chr4g0039821 42.802 778 434 7 6 777 500 1272 0.0 636
Msa0870550 MtrunA17_Chr4g0039821 36.601 612 376 8 173 777 8 614 4.04e-115 378
Msa0870550 MtrunA17_Chr2g0285311 43.077 780 428 7 6 777 493 1264 0.0 630
Msa0870550 MtrunA17_Chr2g0285311 39.787 563 335 4 215 777 49 607 2.08e-123 400
Msa0870550 MtrunA17_Chr2g0285311 64.220 109 39 0 14 122 1158 1266 1.51e-37 152
Msa0870550 MtrunA17_Chr4g0069411 44.459 776 412 9 14 781 528 1292 0.0 628
Msa0870550 MtrunA17_Chr4g0069411 36.394 599 371 8 183 777 42 634 5.45e-111 367
Msa0870550 MtrunA17_Chr2g0285191 43.646 779 424 6 6 777 522 1292 0.0 627
Msa0870550 MtrunA17_Chr2g0285191 37.969 640 345 11 180 777 7 636 1.49e-125 407
Msa0870550 MtrunA17_Chr2g0285191 66.055 109 37 0 14 122 1186 1294 3.83e-38 154
Msa0870550 MtrunA17_Chr4g0069361 42.747 779 435 6 6 778 502 1275 0.0 624
Msa0870550 MtrunA17_Chr4g0069361 36.885 610 375 8 171 777 14 616 2.18e-120 392
Msa0870550 MtrunA17_Chr4g0069351 43.261 779 429 7 6 777 502 1274 0.0 623
Msa0870550 MtrunA17_Chr4g0069351 35.774 601 376 7 182 777 21 616 7.95e-118 385
Msa0870550 MtrunA17_Chr6g0481921 43.061 771 423 6 15 777 404 1166 0.0 621
Msa0870550 MtrunA17_Chr6g0481921 42.369 498 279 7 282 777 18 509 2.20e-115 377
Msa0870550 MtrunA17_Chr6g0481921 66.055 109 37 0 14 122 1060 1168 8.89e-39 155
Msa0870550 MtrunA17_Chr1g0193991 43.790 781 420 7 6 777 513 1283 0.0 620
Msa0870550 MtrunA17_Chr1g0193991 38.206 602 363 7 179 777 32 627 1.13e-122 399
Msa0870550 MtrunA17_Chr1g0193991 71.171 111 32 0 14 124 1177 1287 3.47e-42 166
Msa0870550 MtrunA17_Chr3g0138211 43.406 781 403 9 14 782 528 1281 0.0 610
Msa0870550 MtrunA17_Chr3g0138211 36.622 598 372 7 182 777 42 634 5.54e-106 353
Msa0870550 MtrunA17_Chr2g0285301 43.377 770 425 5 14 777 496 1260 0.0 608
Msa0870550 MtrunA17_Chr2g0285301 38.270 601 360 6 183 778 9 603 2.14e-118 387
Msa0870550 MtrunA17_Chr3g0119381 43.312 785 417 8 14 789 531 1296 0.0 600
Msa0870550 MtrunA17_Chr3g0119381 38.163 566 342 6 215 777 77 637 1.63e-121 395
Msa0870550 MtrunA17_Chr1g0156821 41.906 766 410 9 13 778 503 1233 0.0 597
Msa0870550 MtrunA17_Chr1g0156821 36.184 608 375 7 184 788 19 616 9.87e-103 343
Msa0870550 MtrunA17_Chr1g0156821 61.538 117 45 0 13 129 1125 1241 7.48e-36 146
Msa0870550 MtrunA17_Chr8g0344651 39.589 778 426 11 13 774 729 1478 3.30e-162 508
Msa0870550 MtrunA17_Chr8g0344651 35.552 571 360 4 209 776 269 834 3.65e-116 384
Msa0870550 MtrunA17_Chr8g0344651 65.138 109 37 1 13 120 1373 1481 1.60e-33 139
Msa0870550 MtrunA17_Chr8g0366481 42.833 593 333 4 186 778 39 625 2.62e-159 477
Msa0870550 MtrunA17_Chr8g0366481 67.890 109 35 0 13 121 517 625 5.40e-38 150
Msa0870550 MtrunA17_Chr1g0212701 34.801 704 433 9 77 774 699 1382 3.00e-138 442
Msa0870550 MtrunA17_Chr1g0212701 34.188 585 373 8 191 774 60 633 2.49e-90 310
Msa0870550 MtrunA17_Chr1g0212701 36.126 191 115 3 13 203 530 713 7.25e-25 111
Msa0870550 MtrunA17_Chr1g0212701 56.364 110 43 3 13 121 1278 1383 1.02e-20 98.2
Msa0870550 MtrunA17_Chr7g0222781 36.905 588 365 4 189 774 807 1390 2.83e-133 429
Msa0870550 MtrunA17_Chr7g0222781 32.925 571 369 7 209 774 78 639 2.30e-88 305
Msa0870550 MtrunA17_Chr7g0222781 38.350 206 91 6 13 188 536 735 3.20e-27 119
Msa0870550 MtrunA17_Chr7g0222781 54.545 110 45 3 13 121 1286 1391 1.52e-20 97.8
Msa0870550 MtrunA17_Chr3g0128381 34.839 620 378 7 170 777 31 636 8.42e-129 398
Msa0870550 MtrunA17_Chr3g0128381 53.913 115 45 1 14 120 522 636 5.89e-29 123
Msa0870550 MtrunA17_Chr1g0194031 37.396 599 366 7 182 777 30 622 5.11e-123 390
Msa0870550 MtrunA17_Chr1g0194031 39.888 356 207 5 6 357 508 860 3.61e-73 256
Msa0870550 MtrunA17_Chr1g0194001 47.312 372 195 1 392 763 3 373 7.85e-113 347
Msa0870550 MtrunA17_Chr1g0194001 76.344 93 22 0 14 106 280 372 2.70e-40 152
Msa0870550 MtrunA17_Chr4g0061601 34.530 585 362 10 199 773 48 621 3.09e-105 337
Msa0870550 MtrunA17_Chr4g0061601 60.194 103 40 1 14 116 520 621 1.14e-31 131
Msa0870550 MtrunA17_Chr6g0474071 39.110 427 214 5 390 773 25 448 1.18e-82 271
Msa0870550 MtrunA17_Chr6g0474071 59.223 103 41 1 14 116 347 448 1.16e-28 120
Msa0870550 MtrunA17_Chr3g0128391 32.496 557 311 8 280 777 2 552 2.77e-82 273
Msa0870550 MtrunA17_Chr3g0128391 69.369 111 33 1 10 120 443 552 9.02e-40 155
Msa0870550 MtrunA17_Chr5g0412741 34.875 519 293 12 259 764 199 685 1.39e-78 267
Msa0870550 MtrunA17_Chr5g0412741 57.692 104 39 2 21 120 594 696 5.24e-24 107
Msa0870550 MtrunA17_Chr6g0452081 52.381 231 104 2 512 742 3 227 1.70e-77 249
Msa0870550 MtrunA17_Chr6g0452081 98.649 74 1 0 13 86 154 227 8.88e-40 146
Msa0870550 MtrunA17_Chr7g0227391 33.144 528 327 11 258 777 155 664 1.49e-75 258
Msa0870550 MtrunA17_Chr7g0227391 57.009 107 40 3 18 120 560 664 3.34e-25 111
Msa0870550 MtrunA17_Chr1g0178481 30.827 532 325 11 258 765 103 615 8.78e-66 230
Msa0870550 MtrunA17_Chr1g0178481 46.602 103 55 0 13 115 512 614 8.20e-19 91.3
Msa0870550 MtrunA17_Chr5g0433051 31.589 535 316 14 271 784 203 708 1.76e-63 226
Msa0870550 MtrunA17_Chr5g0433051 50.000 112 55 1 14 125 596 706 1.01e-24 110
Msa0870550 MtrunA17_Chr6g0452051 31.325 415 274 6 258 668 5 412 3.35e-62 215
Msa0870550 MtrunA17_Chr8g0366451 30.508 413 284 2 256 668 36 445 8.61e-60 209
Msa0870550 MtrunA17_Chr5g0433071 32.233 515 303 15 289 784 223 710 1.18e-57 209
Msa0870550 MtrunA17_Chr5g0433071 54.737 95 43 0 14 108 598 692 1.41e-24 109
Msa0870550 MtrunA17_Chr2g0333911 25.096 781 500 24 14 767 278 1000 1.07e-54 204
Msa0870550 MtrunA17_Chr2g0333911 31.754 211 124 6 552 759 176 369 2.12e-19 93.6
Msa0870550 MtrunA17_Chr2g0333911 36.607 112 71 0 7 118 896 1007 3.27e-16 83.6
Msa0870550 MtrunA17_Chr8g0353541 24.842 793 500 29 11 767 323 1055 7.57e-52 196
Msa0870550 MtrunA17_Chr8g0353541 24.476 429 281 11 367 782 39 437 1.06e-24 110
Msa0870550 MtrunA17_Chr8g0353541 34.615 104 67 1 14 117 958 1060 1.80e-11 68.2
Msa0870550 MtrunA17_Chr6g0463201 24.969 797 482 31 11 767 740 1460 1.66e-51 195
Msa0870550 MtrunA17_Chr6g0463201 24.396 414 266 11 379 778 470 850 1.77e-23 107
Msa0870550 MtrunA17_Chr6g0463201 35.238 105 68 0 14 118 1363 1467 2.16e-14 77.8
Msa0870550 MtrunA17_Chr2g0295911 24.586 785 506 26 13 766 758 1487 7.43e-51 193
Msa0870550 MtrunA17_Chr2g0295911 30.583 206 126 3 561 765 666 855 5.68e-20 95.9
Msa0870550 MtrunA17_Chr2g0295911 35.644 101 64 1 18 118 1395 1494 3.28e-11 67.4
Msa0870550 MtrunA17_Chr8g0341751 24.811 794 499 28 11 767 539 1271 1.03e-50 192
Msa0870550 MtrunA17_Chr8g0341751 24.362 431 271 13 367 778 255 649 8.95e-23 104
Msa0870550 MtrunA17_Chr8g0341751 33.654 104 68 1 14 117 1174 1276 4.05e-11 67.0
Msa0870550 MtrunA17_Chr1g0195691 24.838 773 522 22 13 766 767 1499 1.11e-50 192
Msa0870550 MtrunA17_Chr1g0195691 28.794 257 163 4 513 765 624 864 2.17e-22 103
Msa0870550 MtrunA17_Chr1g0195691 35.238 105 67 1 14 118 1403 1506 9.13e-13 72.4
Msa0870550 MtrunA17_Chr8g0337191 25.858 816 500 27 5 774 716 1472 1.31e-50 192
Msa0870550 MtrunA17_Chr8g0337191 27.318 399 242 17 381 764 455 820 1.70e-23 107
Msa0870550 MtrunA17_Chr8g0337191 31.250 128 84 1 14 141 1369 1492 3.94e-15 80.1
Msa0870550 MtrunA17_Chr8g0341811 24.331 785 489 23 11 767 552 1259 1.54e-50 192
Msa0870550 MtrunA17_Chr8g0341811 31.280 211 128 5 558 767 459 653 2.95e-20 96.7
Msa0870550 MtrunA17_Chr8g0341811 34.615 104 67 1 14 117 1162 1264 2.80e-12 70.9
Msa0870550 MtrunA17_Chr8g0353781 25.543 783 499 28 11 767 714 1438 1.88e-50 192
Msa0870550 MtrunA17_Chr8g0353781 24.480 433 276 12 367 782 430 828 7.57e-23 105
Msa0870550 MtrunA17_Chr8g0353781 31.200 125 84 2 14 138 1341 1463 2.18e-11 67.8
Msa0870550 MtrunA17_Chr8g0337121 25.619 808 512 27 5 774 736 1492 6.62e-50 190
Msa0870550 MtrunA17_Chr8g0337121 26.076 395 252 14 381 764 475 840 1.53e-23 107
Msa0870550 MtrunA17_Chr8g0337121 31.250 128 84 1 14 141 1389 1512 3.22e-15 80.5
Msa0870550 MtrunA17_Chr6g0463121 22.109 787 517 20 11 767 735 1455 1.16e-49 189
Msa0870550 MtrunA17_Chr6g0463121 25.163 461 282 16 338 778 428 845 7.50e-25 111
Msa0870550 MtrunA17_Chr6g0463121 34.286 105 69 0 14 118 1358 1462 2.49e-14 77.4
Msa0870550 MtrunA17_Chr6g0463141 22.790 803 518 21 11 767 734 1480 4.23e-49 188
Msa0870550 MtrunA17_Chr6g0463141 23.129 441 274 8 360 763 445 857 1.23e-20 98.2
Msa0870550 MtrunA17_Chr6g0463141 29.524 105 74 0 14 118 1383 1487 6.62e-12 69.7
Msa0870550 MtrunA17_Chr1g0183191 26.223 797 499 27 14 767 761 1511 9.72e-49 187
Msa0870550 MtrunA17_Chr1g0183191 23.387 620 406 19 177 775 294 865 5.49e-26 115
Msa0870550 MtrunA17_Chr1g0183191 35.577 104 67 0 14 117 1414 1517 1.23e-13 75.5
Msa0870550 MtrunA17_Chr8g0341761 23.956 814 470 25 11 767 711 1432 1.11e-48 186
Msa0870550 MtrunA17_Chr8g0341761 24.286 420 265 12 367 767 427 812 1.10e-22 104
Msa0870550 MtrunA17_Chr8g0341761 33.654 104 68 1 14 117 1335 1437 2.07e-11 68.2
Msa0870550 MtrunA17_Chr3g0080941 25.532 799 494 31 13 774 734 1468 3.81e-48 185
Msa0870550 MtrunA17_Chr3g0080941 22.996 474 300 15 311 761 396 827 3.32e-21 99.8
Msa0870550 MtrunA17_Chr3g0080941 37.736 106 66 0 13 118 1364 1469 4.99e-12 70.1
Msa0870550 MtrunA17_Chr6g0463211 24.384 812 501 28 11 767 773 1526 8.12e-47 181
Msa0870550 MtrunA17_Chr6g0463211 26.196 439 269 10 345 762 465 869 5.96e-25 112
Msa0870550 MtrunA17_Chr6g0463211 32.381 105 71 0 14 118 1429 1533 7.23e-13 72.8
Msa0870550 MtrunA17_Chr8g0366471 67.257 113 37 0 11 123 16 128 1.37e-46 162
Msa0870550 MtrunA17_Chr8g0366471 64.545 110 38 1 671 780 20 128 8.11e-41 146
Msa0870550 MtrunA17_Chr7g0262191 25.223 785 526 25 14 767 757 1511 4.38e-45 176
Msa0870550 MtrunA17_Chr7g0262191 23.138 631 424 19 176 789 289 875 1.27e-26 117
Msa0870550 MtrunA17_Chr7g0262191 33.654 104 69 0 14 117 1414 1517 7.15e-13 72.8
Msa0870550 MtrunA17_Chr6g0463131 22.791 781 531 17 5 767 730 1456 4.54e-45 175
Msa0870550 MtrunA17_Chr6g0463131 26.170 470 286 13 337 786 428 856 9.67e-30 127
Msa0870550 MtrunA17_Chr6g0463131 31.429 105 72 0 14 118 1359 1463 1.10e-12 72.0
Msa0870550 MtrunA17_Chr5g0445671 24.905 791 497 28 14 767 357 1087 2.10e-44 173
Msa0870550 MtrunA17_Chr5g0445671 24.569 464 312 12 332 784 34 470 5.08e-26 115
Msa0870550 MtrunA17_Chr5g0445671 33.333 105 70 0 14 118 990 1094 1.60e-13 74.7
Msa0870550 MtrunA17_Chr6g0471281 22.420 785 517 21 11 767 736 1456 8.03e-40 159
Msa0870550 MtrunA17_Chr6g0471281 25.373 469 281 14 337 782 428 850 4.97e-25 112
Msa0870550 MtrunA17_Chr6g0471281 30.769 104 72 0 14 117 1359 1462 9.83e-12 68.9
Msa0870550 MtrunA17_Chr2g0285731 26.852 540 342 19 255 768 953 1465 9.74e-37 149
Msa0870550 MtrunA17_Chr2g0285731 29.778 225 142 4 542 765 621 830 2.18e-22 103
Msa0870550 MtrunA17_Chr2g0285731 37.255 102 63 1 5 105 725 826 5.71e-13 73.2
Msa0870550 MtrunA17_Chr2g0285731 36.792 106 67 0 13 118 1366 1471 8.12e-12 69.3
Msa0870550 MtrunA17_Chr8g0376961 34.468 235 148 4 534 767 1196 1425 3.18e-36 147
Msa0870550 MtrunA17_Chr8g0376961 25.495 455 268 13 336 763 390 800 4.54e-26 115
Msa0870550 MtrunA17_Chr8g0376961 34.783 115 75 0 14 128 1328 1442 5.54e-15 79.7
Msa0870550 MtrunA17_Chr8g0376961 38.235 102 62 1 11 111 703 804 1.56e-13 75.1
Msa0870550 MtrunA17_Chr2g0295921 34.468 235 146 4 534 766 1271 1499 1.14e-35 146
Msa0870550 MtrunA17_Chr2g0295921 29.612 206 128 3 561 765 678 867 3.26e-19 93.6
Msa0870550 MtrunA17_Chr2g0295921 34.375 96 62 1 13 107 770 865 1.24e-13 75.1
Msa0870550 MtrunA17_Chr2g0295921 35.644 101 64 1 18 118 1407 1506 2.79e-11 67.8
Msa0870550 MtrunA17_Chr6g0463391 24.953 529 349 18 260 767 139 640 4.22e-35 142
Msa0870550 MtrunA17_Chr6g0463391 32.381 105 71 0 14 118 543 647 6.80e-13 72.4
Msa0870550 MtrunA17_Chr2g0295901 34.043 235 147 4 534 766 1256 1484 5.20e-35 144
Msa0870550 MtrunA17_Chr2g0295901 30.097 206 127 3 561 765 666 855 2.27e-19 94.0
Msa0870550 MtrunA17_Chr2g0295901 33.333 96 63 1 13 107 758 853 4.77e-13 73.6
Msa0870550 MtrunA17_Chr2g0295901 35.644 101 64 1 18 118 1392 1491 1.66e-11 68.2
Msa0870550 MtrunA17_Chr3g0080981 26.454 533 300 18 287 774 982 1467 7.64e-35 143
Msa0870550 MtrunA17_Chr3g0080981 23.961 409 247 13 380 765 464 831 1.47e-21 100
Msa0870550 MtrunA17_Chr3g0080981 33.333 96 63 1 13 107 734 829 1.45e-12 71.6
Msa0870550 MtrunA17_Chr3g0080981 34.906 106 69 0 13 118 1363 1468 5.63e-11 66.6
Msa0870550 MtrunA17_Chr5g0445741 26.757 441 267 12 354 767 1067 1478 7.50e-34 140
Msa0870550 MtrunA17_Chr5g0445741 26.076 395 260 9 379 766 476 845 3.67e-25 112
Msa0870550 MtrunA17_Chr5g0445741 33.913 115 75 1 14 128 1381 1494 5.78e-15 79.7
Msa0870550 MtrunA17_Chr5g0445741 35.789 95 60 1 14 107 748 842 5.56e-13 73.2
Msa0870550 MtrunA17_Chr8g0359291 23.062 503 342 11 283 767 162 637 8.66e-34 138
Msa0870550 MtrunA17_Chr8g0359291 30.476 105 73 0 14 118 540 644 1.47e-11 68.2
Msa0870550 MtrunA17_Chr6g0463181 22.817 504 342 11 283 767 964 1439 1.59e-33 139
Msa0870550 MtrunA17_Chr6g0463181 24.194 434 286 8 345 763 414 819 3.11e-25 112
Msa0870550 MtrunA17_Chr6g0463181 33.981 103 67 1 5 106 716 818 6.01e-13 73.2
Msa0870550 MtrunA17_Chr6g0463181 31.429 105 72 0 14 118 1342 1446 1.74e-12 71.6
Msa0870550 MtrunA17_Chr8g0363771 34.468 235 146 4 534 766 1256 1484 2.01e-33 139
Msa0870550 MtrunA17_Chr8g0363771 30.583 206 126 3 561 765 661 850 1.22e-19 94.7
Msa0870550 MtrunA17_Chr8g0363771 30.400 125 80 3 13 130 753 877 9.38e-14 75.5
Msa0870550 MtrunA17_Chr8g0363771 34.653 101 65 1 18 118 1392 1491 8.86e-11 65.9
Msa0870550 MtrunA17_Chr5g0412941 30.213 235 158 4 534 767 83 312 8.38e-33 129
Msa0870550 MtrunA17_Chr5g0412941 35.577 104 67 0 14 117 215 318 1.40e-15 79.0
Msa0870550 MtrunA17_Chr8g0341851 31.489 235 155 3 534 767 1218 1447 1.87e-32 135
Msa0870550 MtrunA17_Chr8g0341851 24.292 424 276 11 380 790 452 843 9.10e-21 98.6
Msa0870550 MtrunA17_Chr8g0341851 33.654 104 69 0 14 117 1350 1453 4.47e-13 73.6
Msa0870550 MtrunA17_Chr8g0341851 36.458 96 60 1 11 105 721 816 1.37e-12 72.0
Msa0870550 MtrunA17_Chr5g0412721 26.276 529 344 20 260 767 970 1473 3.13e-32 135
Msa0870550 MtrunA17_Chr5g0412721 27.020 396 253 12 379 766 467 834 9.17e-26 114
Msa0870550 MtrunA17_Chr5g0412721 34.783 115 74 1 14 128 1376 1489 2.15e-15 80.9
Msa0870550 MtrunA17_Chr5g0412721 36.842 95 59 1 14 107 737 831 3.66e-13 73.6
Msa0870550 MtrunA17_Chr1g0202221 29.804 255 166 5 519 767 1115 1362 3.32e-32 135
Msa0870550 MtrunA17_Chr1g0202221 24.018 433 285 11 341 763 433 831 2.47e-22 103
Msa0870550 MtrunA17_Chr1g0202221 30.476 105 73 0 14 118 1265 1369 5.07e-12 70.1
Msa0870550 MtrunA17_Chr1g0202221 31.068 103 70 1 5 106 728 830 2.29e-11 67.8
Msa0870550 MtrunA17_Chr6g0472531 29.008 262 174 5 513 767 1150 1406 9.43e-32 133
Msa0870550 MtrunA17_Chr6g0472531 24.503 453 295 11 338 778 379 796 1.25e-23 107
Msa0870550 MtrunA17_Chr6g0472531 36.607 112 67 2 5 112 680 791 6.20e-14 76.3
Msa0870550 MtrunA17_Chr6g0472531 32.479 117 74 1 14 125 1309 1425 2.78e-13 73.9
Msa0870550 MtrunA17_Chr3g0085281 30.864 243 161 5 534 775 1219 1455 1.04e-31 133
Msa0870550 MtrunA17_Chr3g0085281 24.609 447 280 12 338 763 396 806 3.57e-25 112
Msa0870550 MtrunA17_Chr3g0085281 33.824 136 82 3 12 146 710 838 3.09e-15 80.5
Msa0870550 MtrunA17_Chr3g0085281 31.579 114 78 0 14 127 1351 1464 4.26e-14 76.6
Msa0870550 MtrunA17_Chr6g0463151 29.787 235 159 3 534 767 1044 1273 6.40e-31 130
Msa0870550 MtrunA17_Chr6g0463151 24.605 443 287 9 337 766 245 653 1.60e-24 110
Msa0870550 MtrunA17_Chr6g0463151 35.052 97 62 1 11 106 553 649 7.01e-13 72.8
Msa0870550 MtrunA17_Chr6g0463151 30.476 105 73 0 14 118 1176 1280 1.01e-11 68.9
Msa0870550 MtrunA17_Chr3g0101441 25.370 473 298 16 341 782 855 1303 1.01e-30 130
Msa0870550 MtrunA17_Chr3g0101441 22.025 563 387 11 240 781 140 671 1.05e-22 104
Msa0870550 MtrunA17_Chr3g0101441 34.211 114 74 1 14 127 1192 1304 1.71e-13 74.7
Msa0870550 MtrunA17_Chr3g0101441 36.170 94 59 1 14 106 550 643 2.80e-12 70.9
Msa0870550 MtrunA17_Chr3g0101461 25.000 444 294 15 354 779 879 1301 2.56e-30 129
Msa0870550 MtrunA17_Chr3g0101461 21.441 569 383 12 240 781 140 671 4.07e-22 102
Msa0870550 MtrunA17_Chr3g0101461 34.211 114 74 1 14 127 1192 1304 2.27e-13 74.3
Msa0870550 MtrunA17_Chr3g0101461 31.061 132 83 2 14 137 550 681 3.13e-12 70.5
Msa0870550 MtrunA17_Chr6g0484351 33.898 236 148 4 534 767 410 639 3.51e-30 127
Msa0870550 MtrunA17_Chr6g0484351 33.654 104 68 1 14 117 542 644 1.86e-11 67.8
Msa0870550 MtrunA17_Chr8g0341801 33.898 236 148 4 534 767 185 414 9.60e-30 123
Msa0870550 MtrunA17_Chr5g0445701 31.658 199 131 3 546 744 7 200 2.86e-29 117
Msa0870550 MtrunA17_Chr5g0445701 31.818 110 69 1 14 117 126 235 2.79e-12 67.4
Msa0870550 MtrunA17_Chr3g0101471 25.223 448 294 13 337 767 864 1287 4.78e-29 125
Msa0870550 MtrunA17_Chr3g0101471 23.232 594 398 18 210 781 112 669 2.93e-25 112
Msa0870550 MtrunA17_Chr3g0101471 35.965 114 72 1 14 127 1190 1302 3.53e-14 77.0
Msa0870550 MtrunA17_Chr3g0101471 36.170 94 59 1 14 106 548 641 4.95e-12 70.1
Msa0870550 MtrunA17_Chr8g0393151 34.906 212 114 5 553 754 35 232 1.74e-28 115
Msa0870550 MtrunA17_Chr8g0393151 42.857 84 45 2 18 98 149 232 3.78e-11 64.3
Msa0870550 MtrunA17_Chr3g0101481 25.532 470 317 15 308 762 1026 1477 2.17e-28 122
Msa0870550 MtrunA17_Chr3g0101481 26.728 434 260 14 360 778 459 849 3.37e-24 109
Msa0870550 MtrunA17_Chr3g0101481 37.895 95 58 1 14 107 742 836 1.92e-13 74.7
Msa0870550 MtrunA17_Chr3g0101481 30.702 114 79 0 14 127 1385 1498 2.31e-12 71.2
Msa0870550 MtrunA17_Chr2g0285231 63.855 83 30 0 25 107 19 101 2.18e-27 107
Msa0870550 MtrunA17_Chr2g0285231 61.842 76 29 0 687 762 25 100 1.64e-23 95.9
Msa0870550 MtrunA17_Chr5g0412921 32.035 231 130 6 539 766 619 825 1.60e-24 110
Msa0870550 MtrunA17_Chr5g0412921 38.298 94 57 1 14 106 728 821 3.13e-14 77.0
Msa0870550 MtrunA17_Chr6g0463401 27.342 395 221 13 345 713 435 789 3.51e-21 99.4
Msa0870550 MtrunA17_Chr7g0249091 34.538 249 125 11 536 758 86 322 1.47e-20 94.0
Msa0870550 MtrunA17_Chr2g0300791 33.600 125 75 2 187 311 4 120 7.75e-20 87.4
Msa0870550 MtrunA17_Chr8g0341791 31.765 170 110 3 614 782 16 180 1.45e-19 91.3
Msa0870550 MtrunA17_Chr8g0341791 35.052 97 62 1 11 106 66 162 5.79e-14 74.3
Msa0870550 MtrunA17_Chr1g0176441 33.065 248 139 12 553 786 171 405 1.00e-17 88.2
Msa0870550 MtrunA17_Chr1g0176451 32.099 243 149 11 553 786 23 258 1.81e-17 86.7
Msa0870550 MtrunA17_Chr1g0202431 33.333 237 124 11 546 765 44 263 2.10e-17 86.7
Msa0870550 MtrunA17_Chr8g0359931 30.864 243 152 9 552 786 65 299 2.58e-17 86.7
Msa0870550 MtrunA17_Chr6g0484361 24.742 388 240 12 367 735 434 788 1.39e-16 84.3
Msa0870550 MtrunA17_Chr3g0130211 30.672 238 132 9 536 763 36 250 1.80e-16 80.5
Msa0870550 MtrunA17_Chr7g0267971 27.935 247 153 11 553 786 160 394 1.05e-14 78.2
Msa0870550 MtrunA17_Chr7g0263351 31.905 210 127 10 564 763 138 341 1.57e-13 74.7
Msa0870550 MtrunA17_Chr5g0408061 26.506 249 163 10 553 791 65 303 2.11e-13 73.9
Msa0870550 MtrunA17_Chr6g0477811 32.579 221 124 10 553 759 66 275 2.77e-13 73.6
Msa0870550 MtrunA17_Chr8g0384391 29.469 207 124 9 568 763 71 266 3.30e-13 73.2
Msa0870550 MtrunA17_Chr1g0213091 31.579 209 129 9 564 763 133 336 3.92e-13 73.2
Msa0870550 MtrunA17_Chr7g0257341 30.093 216 139 7 568 781 587 792 4.38e-13 73.6
Msa0870550 MtrunA17_Chr3g0102731 26.860 242 161 9 553 786 98 331 4.81e-13 72.8
Msa0870550 MtrunA17_Chr5g0446901 29.245 212 140 6 553 756 109 318 5.00e-13 72.8
Msa0870550 MtrunA17_Chr4g0065231 28.959 221 150 5 548 761 69 289 5.69e-13 72.4
Msa0870550 MtrunA17_Chr8g0349441 28.090 178 102 3 538 715 53 204 1.03e-12 68.2
Msa0870550 MtrunA17_Chr1g0198931 28.704 216 134 9 553 756 107 314 1.22e-12 71.6
Msa0870550 MtrunA17_Chr1g0208391 29.493 217 134 8 552 756 92 301 1.42e-12 71.2
Msa0870550 MtrunA17_Chr4g0039251 32.039 206 125 8 549 748 89 285 2.42e-12 70.9
Msa0870550 MtrunA17_Chr4g0060401 23.404 235 161 8 545 771 619 842 2.57e-12 70.9
Msa0870550 MtrunA17_Chr2g0318061 25.703 249 165 10 553 791 31 269 8.41e-12 67.8
Msa0870550 MtrunA17_Chr8g0371961 36.842 76 48 0 552 627 17 92 2.10e-11 62.0
Msa0870550 MtrunA17_Chr2g0285211 33.333 105 70 0 461 565 14 118 2.71e-11 61.6
Msa0870550 MtrunA17_Chr8g0393191 29.665 209 129 10 564 761 80 281 2.86e-11 67.4
Msa0870550 MtrunA17_Chr6g0452091 22.857 210 155 4 267 474 22 226 2.92e-11 64.7
Msa0870550 MtrunA17_Chr3g0093091 24.691 243 148 9 545 771 626 849 3.07e-11 67.4
Msa0870550 MtrunA17_Chr4g0039261 30.500 200 128 6 553 748 51 243 3.17e-11 67.0
Msa0870550 MtrunA17_Chr4g0050221 30.594 219 136 7 552 759 30 243 3.51e-11 66.6
Msa0870550 MtrunA17_Chr1g0200651 29.756 205 125 10 563 756 100 296 3.63e-11 66.6
Msa0870550 MtrunA17_Chr1g0199471 27.778 216 143 8 528 736 493 702 3.89e-11 67.0
Msa0870550 MtrunA17_Chr4g0060431 23.404 235 161 9 545 771 606 829 5.08e-11 66.6
Msa0870550 MtrunA17_Chr5g0411621 30.303 198 127 9 567 757 65 258 6.33e-11 66.2
Msa0870550 MtrunA17_Chr3g0130331 29.208 202 123 7 568 757 73 266 7.14e-11 65.9
Msa0870550 MtrunA17_Chr4g0060421 24.576 236 157 10 545 771 141 364 7.53e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870550 AT3G28345.1 70.130 770 202 4 13 777 490 1236 0.0 1096
Msa0870550 AT3G28345.1 36.694 605 365 9 182 778 4 598 3.85e-115 378
Msa0870550 AT3G28415.1 64.360 766 257 2 13 778 469 1218 0.0 1031
Msa0870550 AT3G28415.1 36.742 577 327 11 215 777 24 576 2.53e-105 351
Msa0870550 AT3G28415.2 64.360 766 257 2 13 778 477 1226 0.0 1030
Msa0870550 AT3G28415.2 36.915 577 334 10 215 777 24 584 1.26e-107 357
Msa0870550 AT3G28380.1 64.276 767 254 4 13 778 490 1237 0.0 1019
Msa0870550 AT3G28380.1 37.068 607 360 10 182 778 4 598 4.43e-113 372
Msa0870550 AT3G28390.1 64.099 766 254 3 13 778 478 1222 0.0 1008
Msa0870550 AT3G28390.1 37.182 589 344 11 202 778 12 586 1.17e-114 376
Msa0870550 AT3G28360.1 63.364 767 262 4 13 779 477 1224 0.0 1002
Msa0870550 AT3G28360.1 36.410 585 353 9 202 778 11 584 6.69e-110 363
Msa0870550 AT3G28860.1 45.641 780 400 8 4 777 487 1248 0.0 683
Msa0870550 AT3G28860.1 38.384 594 357 5 188 777 14 602 1.81e-118 387
Msa0870550 AT1G10680.1 44.459 767 390 8 13 779 492 1222 0.0 666
Msa0870550 AT1G10680.1 37.018 597 365 7 184 777 11 599 5.28e-117 382
Msa0870550 AT1G10680.1 64.035 114 41 0 13 126 1113 1226 5.41e-40 160
Msa0870550 AT2G36910.1 44.716 776 409 7 13 778 499 1264 0.0 662
Msa0870550 AT2G36910.1 37.415 588 362 4 193 777 23 607 8.23e-117 383
Msa0870550 AT1G02520.1 44.317 783 421 8 6 782 505 1278 0.0 662
Msa0870550 AT1G02520.1 38.850 574 324 8 216 777 61 619 1.56e-116 382
Msa0870550 AT1G02520.2 44.317 783 421 8 6 782 505 1278 0.0 662
Msa0870550 AT1G02520.2 38.850 574 324 8 216 777 61 619 1.56e-116 382
Msa0870550 AT1G02520.3 44.317 783 421 8 6 782 505 1278 0.0 662
Msa0870550 AT1G02520.3 38.850 574 324 8 216 777 61 619 1.56e-116 382
Msa0870550 AT4G25960.1 45.372 767 391 7 13 779 532 1270 0.0 661
Msa0870550 AT4G25960.1 36.689 586 358 7 215 791 79 660 1.21e-113 374
Msa0870550 AT4G25960.1 66.071 112 38 0 13 124 1161 1272 3.21e-38 154
Msa0870550 AT1G27940.2 44.837 765 398 6 13 777 288 1028 0.0 656
Msa0870550 AT1G27940.2 44.361 399 216 4 380 777 1 394 7.72e-99 330
Msa0870550 AT1G27940.2 59.633 109 44 0 13 121 921 1029 6.74e-35 143
Msa0870550 AT1G27940.1 44.837 765 398 6 13 777 502 1242 0.0 655
Msa0870550 AT1G27940.1 37.456 566 345 6 215 777 49 608 2.81e-113 373
Msa0870550 AT1G27940.1 59.633 109 44 0 13 121 1135 1243 8.46e-35 143
Msa0870550 AT2G47000.6 45.165 786 405 10 6 777 508 1281 0.0 653
Msa0870550 AT2G47000.6 38.407 565 339 7 215 777 65 622 4.69e-115 378
Msa0870550 AT2G47000.6 69.725 109 33 0 14 122 1175 1283 4.12e-41 163
Msa0870550 AT2G47000.5 45.165 786 405 10 6 777 508 1281 0.0 653
Msa0870550 AT2G47000.5 38.407 565 339 7 215 777 65 622 4.69e-115 378
Msa0870550 AT2G47000.5 69.725 109 33 0 14 122 1175 1283 4.12e-41 163
Msa0870550 AT2G47000.1 45.165 786 405 10 6 777 508 1281 0.0 653
Msa0870550 AT2G47000.1 38.407 565 339 7 215 777 65 622 4.69e-115 378
Msa0870550 AT2G47000.1 69.725 109 33 0 14 122 1175 1283 4.12e-41 163
Msa0870550 AT3G62150.3 46.184 773 407 7 6 777 527 1291 0.0 648
Msa0870550 AT3G62150.3 37.902 591 357 8 191 777 57 641 1.33e-121 396
Msa0870550 AT3G62150.2 46.184 773 407 7 6 777 527 1291 0.0 648
Msa0870550 AT3G62150.2 37.902 591 357 8 191 777 57 641 1.33e-121 396
Msa0870550 AT3G62150.1 46.184 773 407 7 6 777 527 1291 0.0 648
Msa0870550 AT3G62150.1 37.902 591 357 8 191 777 57 641 1.33e-121 396
Msa0870550 AT1G28010.1 45.692 766 391 8 13 777 503 1244 0.0 637
Msa0870550 AT1G28010.1 37.633 566 344 6 215 777 50 609 3.65e-116 380
Msa0870550 AT1G28010.1 59.459 111 45 0 11 121 1135 1245 2.29e-34 142
Msa0870550 AT1G02530.1 42.351 791 433 8 6 782 492 1273 0.0 632
Msa0870550 AT1G02530.1 36.422 626 361 11 184 788 15 624 1.53e-110 366
Msa0870550 AT4G01830.1 44.083 769 407 5 14 782 485 1230 0.0 625
Msa0870550 AT4G01830.1 37.633 566 344 6 215 777 32 591 1.14e-116 382
Msa0870550 AT4G01830.2 44.083 769 407 5 14 782 251 996 0.0 624
Msa0870550 AT4G01830.2 47.977 346 177 2 432 777 15 357 6.72e-96 321
Msa0870550 AT4G01820.1 43.455 764 413 4 14 777 480 1224 0.0 617
Msa0870550 AT4G01820.1 36.887 591 365 7 191 778 2 587 4.68e-109 361
Msa0870550 AT1G10680.2 43.892 704 360 7 13 716 492 1160 0.0 602
Msa0870550 AT1G10680.2 37.018 597 365 7 184 777 11 599 6.71e-117 381
Msa0870550 AT1G10680.2 82.000 50 9 0 13 62 1113 1162 1.57e-17 88.2
Msa0870550 AT4G18050.1 44.031 779 404 8 6 777 479 1232 0.0 588
Msa0870550 AT4G18050.1 38.526 597 360 7 183 777 2 593 1.21e-120 392
Msa0870550 AT4G18050.1 70.642 109 32 0 14 122 1126 1234 6.92e-40 159
Msa0870550 AT4G18050.2 44.031 779 404 8 6 777 489 1242 0.0 588
Msa0870550 AT4G18050.2 39.716 564 334 6 215 777 45 603 2.00e-119 389
Msa0870550 AT4G18050.2 70.642 109 32 0 14 122 1136 1244 7.35e-40 159
Msa0870550 AT5G46540.1 41.379 783 427 9 6 776 481 1243 0.0 576
Msa0870550 AT5G46540.1 38.407 565 342 5 214 777 36 595 1.69e-129 417
Msa0870550 AT2G47000.2 41.815 672 366 9 6 663 508 1168 9.20e-162 500
Msa0870550 AT2G47000.2 38.407 565 339 7 215 777 65 622 2.89e-115 377
Msa0870550 AT2G39480.2 35.252 695 411 8 92 774 546 1213 2.92e-138 439
Msa0870550 AT2G39480.2 35.054 465 296 4 302 766 1 459 8.85e-84 291
Msa0870550 AT2G39480.2 51.786 112 53 1 13 124 362 472 1.39e-25 114
Msa0870550 AT2G39480.2 52.727 110 47 3 13 121 1109 1214 1.68e-19 94.7
Msa0870550 AT2G39480.1 35.252 695 411 8 92 774 726 1393 6.97e-137 439
Msa0870550 AT2G39480.1 32.447 564 369 6 209 766 82 639 6.44e-87 301
Msa0870550 AT2G39480.1 51.786 112 53 1 13 124 542 652 1.33e-25 114
Msa0870550 AT2G39480.1 52.727 110 47 3 13 121 1289 1394 1.62e-19 94.7
Msa0870550 AT3G55320.1 37.770 601 358 6 182 774 802 1394 2.09e-134 433
Msa0870550 AT3G55320.1 32.554 599 387 9 183 774 59 647 6.72e-90 310
Msa0870550 AT3G55320.1 50.893 112 54 1 13 124 544 654 2.31e-25 113
Msa0870550 AT3G55320.1 51.818 110 48 3 13 121 1290 1395 3.09e-19 94.0
Msa0870550 AT2G47000.4 39.373 574 324 8 6 565 508 1071 1.12e-121 393
Msa0870550 AT2G47000.4 38.407 565 339 7 215 777 65 622 7.66e-116 377
Msa0870550 AT2G47000.3 38.407 565 339 7 215 777 65 622 1.20e-116 377
Msa0870550 AT2G47000.3 39.712 486 269 8 6 477 508 983 7.09e-104 343
Msa0870550 AT2G47000.7 38.407 565 339 7 215 777 65 622 1.20e-116 377
Msa0870550 AT2G47000.7 39.712 486 269 8 6 477 508 983 7.09e-104 343
Msa0870550 AT1G02530.2 36.422 626 361 11 184 788 15 624 2.91e-112 364
Msa0870550 AT1G02530.2 37.185 476 278 6 6 468 492 959 2.92e-97 324
Msa0870550 AT4G01820.2 36.573 607 372 9 191 791 2 601 1.42e-110 360
Msa0870550 AT4G01820.2 37.500 464 272 3 14 477 480 925 8.35e-96 320
Msa0870550 AT5G39040.1 33.887 602 363 8 194 777 50 634 9.15e-94 307
Msa0870550 AT5G39040.1 57.009 107 45 1 14 120 529 634 6.27e-32 132
Msa0870550 AT1G70610.2 33.948 542 307 15 252 777 8 514 3.09e-83 275
Msa0870550 AT1G70610.2 56.190 105 39 3 21 120 412 514 2.13e-23 105
Msa0870550 AT1G70610.1 34.216 529 316 12 263 777 185 695 1.17e-80 273
Msa0870550 AT1G70610.1 56.190 105 39 3 21 120 593 695 3.75e-23 105
Msa0870550 AT4G25450.3 34.387 538 297 9 289 778 12 541 1.24e-80 269
Msa0870550 AT4G25450.3 59.259 108 43 1 14 121 435 541 2.46e-29 124
Msa0870550 AT4G25450.1 34.387 538 297 9 289 778 181 710 2.31e-78 267
Msa0870550 AT4G25450.1 59.259 108 43 1 14 121 604 710 5.38e-29 124
Msa0870550 AT4G28620.1 31.619 525 326 11 267 777 169 674 3.11e-65 230
Msa0870550 AT4G28620.1 50.000 110 54 1 14 123 569 677 6.21e-24 108
Msa0870550 AT5G58270.1 32.342 538 316 16 267 784 212 721 8.72e-64 227
Msa0870550 AT5G58270.1 49.107 112 56 1 14 125 609 719 6.14e-24 108
Msa0870550 AT4G28630.1 34.839 465 253 13 328 777 243 672 7.27e-62 221
Msa0870550 AT4G28630.1 48.544 103 52 1 14 116 567 668 2.01e-22 103
Msa0870550 AT5G03910.1 32.613 509 334 7 258 763 119 621 1.13e-61 219
Msa0870550 AT5G03910.1 50.505 99 49 0 14 112 529 627 1.88e-19 93.6
Msa0870550 AT2G47800.1 26.323 775 518 20 13 766 758 1500 7.41e-58 215
Msa0870550 AT2G47800.1 29.060 234 143 5 536 765 641 855 9.66e-20 95.5
Msa0870550 AT2G47800.1 35.238 105 67 1 14 118 1404 1507 2.37e-11 68.2
Msa0870550 AT3G60160.3 25.721 797 493 24 11 767 709 1446 8.13e-54 202
Msa0870550 AT3G60160.3 27.119 413 269 9 359 764 420 807 3.82e-24 109
Msa0870550 AT3G60160.3 36.190 105 67 0 14 118 1349 1453 2.43e-15 81.3
Msa0870550 AT3G60160.1 25.721 797 493 24 11 767 745 1482 1.07e-53 202
Msa0870550 AT3G60160.1 27.119 413 269 9 359 764 456 843 3.89e-24 109
Msa0870550 AT3G60160.1 36.190 105 67 0 14 118 1385 1489 2.36e-15 81.3
Msa0870550 AT3G13090.1 24.842 789 497 25 14 767 719 1446 6.34e-53 200
Msa0870550 AT3G13090.1 29.560 159 96 3 615 766 667 816 7.74e-17 86.3
Msa0870550 AT3G13090.1 36.538 104 66 0 14 117 1349 1452 5.50e-15 80.1
Msa0870550 AT3G62700.1 24.781 799 525 22 13 766 756 1523 6.09e-51 194
Msa0870550 AT3G62700.1 28.139 231 149 3 536 765 639 853 7.20e-20 95.9
Msa0870550 AT3G62700.1 35.238 105 67 1 14 118 1427 1530 2.51e-11 68.2
Msa0870550 AT1G30400.2 26.230 793 503 26 5 767 724 1464 5.44e-49 188
Msa0870550 AT1G30400.2 30.222 225 141 5 542 765 620 829 2.89e-22 103
Msa0870550 AT1G30400.2 34.677 124 81 0 13 136 1366 1489 8.55e-11 66.6
Msa0870550 AT1G30400.1 26.230 793 503 26 5 767 724 1464 5.44e-49 188
Msa0870550 AT1G30400.1 30.222 225 141 5 542 765 620 829 2.89e-22 103
Msa0870550 AT1G30400.1 34.677 124 81 0 13 136 1366 1489 8.55e-11 66.6
Msa0870550 AT1G04120.3 25.693 794 512 26 14 767 705 1460 1.73e-46 180
Msa0870550 AT1G04120.3 30.284 317 179 8 460 766 518 802 2.62e-24 110
Msa0870550 AT1G04120.3 33.654 104 69 0 14 117 1363 1466 3.08e-13 74.3
Msa0870550 AT1G04120.1 25.693 794 512 26 14 767 740 1495 2.50e-46 180
Msa0870550 AT1G04120.1 27.595 395 240 10 386 766 475 837 2.08e-26 117
Msa0870550 AT1G04120.1 33.654 104 69 0 14 117 1398 1501 2.92e-13 74.7
Msa0870550 AT2G07680.3 23.810 777 508 23 14 767 701 1416 1.20e-45 177
Msa0870550 AT2G07680.3 25.754 431 265 14 342 757 400 790 1.14e-24 111
Msa0870550 AT2G07680.3 37.963 108 67 0 14 121 1319 1426 2.83e-16 84.3
Msa0870550 AT2G07680.1 23.810 777 508 23 14 767 679 1394 1.22e-45 177
Msa0870550 AT2G07680.1 25.754 431 265 14 342 757 378 768 9.36e-25 111
Msa0870550 AT2G07680.1 37.963 108 67 0 14 121 1297 1404 3.12e-16 84.3
Msa0870550 AT2G07680.4 23.810 777 508 23 14 767 676 1391 1.25e-45 177
Msa0870550 AT2G07680.4 25.754 431 265 14 342 757 375 765 1.00e-24 111
Msa0870550 AT2G07680.4 37.963 108 67 0 14 121 1294 1401 2.99e-16 84.3
Msa0870550 AT2G07680.6 23.810 777 508 23 14 767 602 1317 1.56e-45 177
Msa0870550 AT2G07680.6 25.754 431 265 14 342 757 301 691 1.59e-24 110
Msa0870550 AT2G07680.6 37.963 108 67 0 14 121 1220 1327 3.25e-16 84.0
Msa0870550 AT2G07680.5 23.810 777 508 23 14 767 685 1400 1.60e-45 177
Msa0870550 AT2G07680.5 25.754 431 265 14 342 757 384 774 1.14e-24 111
Msa0870550 AT2G07680.5 37.963 108 67 0 14 121 1303 1410 3.20e-16 84.0
Msa0870550 AT1G04120.2 25.945 794 505 28 14 767 740 1490 8.63e-45 175
Msa0870550 AT1G04120.2 27.595 395 240 10 386 766 475 837 1.97e-26 117
Msa0870550 AT1G04120.2 33.333 96 64 0 22 117 1401 1496 2.21e-12 71.6
Msa0870550 AT4G25450.2 30.023 443 256 8 289 683 181 617 2.30e-43 167
Msa0870550 AT5G39040.2 27.391 460 302 6 194 635 50 495 4.14e-39 153
Msa0870550 AT1G30420.1 25.440 511 333 17 287 774 983 1468 2.49e-36 148
Msa0870550 AT1G30420.1 24.750 400 256 12 380 766 464 831 5.38e-21 99.8
Msa0870550 AT1G30420.1 31.967 122 77 3 13 129 733 853 3.98e-11 67.4
Msa0870550 AT3G13100.2 24.953 537 344 16 258 767 719 1223 2.32e-35 145
Msa0870550 AT3G13100.2 31.373 153 101 3 615 766 445 594 3.65e-17 87.0
Msa0870550 AT3G13100.2 36.538 104 66 0 14 117 1126 1229 9.33e-15 79.3
Msa0870550 AT3G13100.2 36.842 95 59 1 14 107 497 591 1.10e-12 72.4
Msa0870550 AT3G13100.1 24.953 537 344 16 258 767 964 1468 4.21e-35 144
Msa0870550 AT3G13100.1 31.373 153 101 3 615 766 690 839 2.68e-17 87.8
Msa0870550 AT3G13100.1 36.538 104 66 0 14 117 1371 1474 5.67e-15 80.1
Msa0870550 AT3G13100.1 36.842 95 59 1 14 107 742 836 6.25e-13 73.6
Msa0870550 AT2G34660.3 27.574 544 328 22 255 767 675 1183 8.34e-35 144
Msa0870550 AT2G34660.3 25.355 422 261 12 358 765 161 542 4.88e-24 109
Msa0870550 AT2G34660.3 36.275 102 64 1 5 105 437 538 2.74e-12 71.2
Msa0870550 AT2G34660.3 37.736 106 66 0 13 118 1084 1189 1.37e-11 68.9
Msa0870550 AT3G59140.1 25.572 481 319 14 293 754 961 1421 8.84e-35 144
Msa0870550 AT3G59140.1 23.515 421 268 10 363 764 430 815 3.27e-23 106
Msa0870550 AT3G59140.1 32.381 105 71 0 14 118 1337 1441 3.34e-14 77.4
Msa0870550 AT3G59140.1 34.737 95 61 1 13 106 719 813 1.24e-11 69.3
Msa0870550 AT2G34660.1 27.574 544 328 22 255 767 962 1470 9.60e-35 143
Msa0870550 AT2G34660.1 25.355 422 261 12 358 765 448 829 5.06e-24 109
Msa0870550 AT2G34660.1 36.275 102 64 1 5 105 724 825 1.83e-12 72.0
Msa0870550 AT2G34660.1 37.736 106 66 0 13 118 1371 1476 8.98e-12 69.7
Msa0870550 AT2G34660.2 27.574 544 328 22 255 767 962 1470 9.60e-35 143
Msa0870550 AT2G34660.2 25.355 422 261 12 358 765 448 829 5.06e-24 109
Msa0870550 AT2G34660.2 36.275 102 64 1 5 105 724 825 1.83e-12 72.0
Msa0870550 AT2G34660.2 37.736 106 66 0 13 118 1371 1476 8.98e-12 69.7
Msa0870550 AT3G60160.2 24.747 691 418 25 11 661 745 1373 5.11e-34 141
Msa0870550 AT3G60160.2 27.119 413 269 9 359 764 456 843 4.87e-24 109
Msa0870550 AT3G21250.2 35.242 227 138 4 548 772 1225 1444 8.44e-34 140
Msa0870550 AT3G21250.2 25.641 429 266 13 379 790 443 835 6.72e-22 102
Msa0870550 AT3G21250.2 34.021 97 63 1 11 106 713 809 8.20e-12 69.7
Msa0870550 AT3G21250.5 35.242 227 138 4 548 772 1220 1439 8.80e-34 140
Msa0870550 AT3G21250.5 24.709 429 259 14 379 790 449 830 9.26e-19 92.4
Msa0870550 AT3G21250.1 35.242 227 138 4 548 772 1214 1433 8.85e-34 140
Msa0870550 AT3G21250.1 24.709 429 259 14 379 790 443 824 8.94e-19 92.4
Msa0870550 AT3G21250.4 35.242 227 138 4 548 772 1231 1450 9.23e-34 140
Msa0870550 AT3G21250.4 25.175 429 268 13 379 790 449 841 8.41e-22 102
Msa0870550 AT3G21250.4 34.021 97 63 1 11 106 719 815 8.14e-12 69.7
Msa0870550 AT3G21250.6 35.242 227 138 4 548 772 809 1028 1.16e-33 139
Msa0870550 AT3G21250.6 25.899 417 256 13 391 790 39 419 4.10e-21 99.8
Msa0870550 AT3G21250.6 34.021 97 63 1 11 106 297 393 9.19e-12 69.3
Msa0870550 AT3G21250.3 35.242 227 138 4 548 772 809 1028 1.16e-33 139
Msa0870550 AT3G21250.3 25.899 417 256 13 391 790 39 419 4.10e-21 99.8
Msa0870550 AT3G21250.3 34.021 97 63 1 11 106 297 393 9.19e-12 69.3
Msa0870550 AT1G30410.5 26.130 509 332 19 287 774 868 1353 4.56e-33 138
Msa0870550 AT1G30410.5 25.653 421 257 14 360 765 336 715 1.30e-19 95.1
Msa0870550 AT1G30410.5 31.538 130 83 3 5 129 610 738 6.45e-11 67.0
Msa0870550 AT1G30410.2 26.130 509 332 19 287 774 983 1468 5.76e-33 138
Msa0870550 AT1G30410.2 25.653 421 257 14 360 765 451 830 1.86e-19 94.7
Msa0870550 AT1G30410.2 31.538 130 83 3 5 129 725 853 4.52e-11 67.4
Msa0870550 AT1G30410.6 26.130 509 332 19 287 774 983 1468 5.76e-33 138
Msa0870550 AT1G30410.6 25.653 421 257 14 360 765 451 830 1.86e-19 94.7
Msa0870550 AT1G30410.6 31.538 130 83 3 5 129 725 853 4.52e-11 67.4
Msa0870550 AT1G30410.4 26.130 509 332 19 287 774 983 1468 5.76e-33 138
Msa0870550 AT1G30410.4 25.653 421 257 14 360 765 451 830 1.86e-19 94.7
Msa0870550 AT1G30410.4 31.538 130 83 3 5 129 725 853 4.52e-11 67.4
Msa0870550 AT1G30410.1 26.130 509 332 19 287 774 986 1471 6.68e-33 137
Msa0870550 AT1G30410.1 25.653 421 257 14 360 765 454 833 2.04e-19 94.4
Msa0870550 AT1G30410.1 31.538 130 83 3 5 129 728 856 4.84e-11 67.4
Msa0870550 AT3G60970.1 24.769 541 350 17 251 767 522 1029 3.54e-31 132
Msa0870550 AT3G60970.1 27.119 413 269 9 359 764 40 427 1.13e-28 124
Msa0870550 AT3G60970.1 40.816 98 57 1 11 107 329 426 1.00e-15 82.4
Msa0870550 AT3G60970.1 36.190 105 67 0 14 118 932 1036 2.77e-15 80.9
Msa0870550 AT1G67940.1 34.951 206 121 4 553 754 44 240 5.45e-31 123
Msa0870550 AT1G67940.1 42.857 84 45 2 18 98 157 240 2.12e-11 65.9
Msa0870550 AT3G13080.1 31.915 235 154 4 534 767 1267 1496 3.25e-30 129
Msa0870550 AT3G13080.1 30.719 153 102 2 615 766 706 855 2.62e-17 87.8
Msa0870550 AT3G13080.1 32.759 116 78 0 14 129 1399 1514 1.46e-13 75.5
Msa0870550 AT3G13080.1 34.737 95 61 1 14 107 758 852 1.06e-11 69.3
Msa0870550 AT3G13080.5 31.651 218 143 4 534 750 1267 1479 9.13e-29 124
Msa0870550 AT3G13080.5 30.719 153 102 2 615 766 706 855 2.38e-17 87.8
Msa0870550 AT3G13080.5 34.737 95 61 1 14 107 758 852 1.05e-11 69.3
Msa0870550 AT2G07680.2 25.754 431 265 14 342 757 400 790 1.24e-24 111
Msa0870550 AT2G07680.2 20.863 417 269 15 14 418 701 1068 4.72e-11 67.4
Msa0870550 AT3G13080.2 28.511 235 137 3 534 767 1267 1471 6.11e-21 99.4
Msa0870550 AT3G13080.2 30.719 153 102 2 615 766 706 855 2.50e-17 87.8
Msa0870550 AT3G13080.2 32.759 116 78 0 14 129 1374 1489 1.37e-13 75.5
Msa0870550 AT3G13080.2 34.737 95 61 1 14 107 758 852 9.85e-12 69.7
Msa0870550 AT1G30420.2 24.750 400 256 12 380 766 464 831 7.71e-21 99.0
Msa0870550 AT1G30420.2 31.967 122 77 3 13 129 733 853 2.15e-11 68.2
Msa0870550 AT1G30410.3 31.140 228 135 6 542 765 621 830 2.15e-19 94.4
Msa0870550 AT1G30410.3 22.886 402 267 18 287 667 983 1362 1.22e-14 79.0
Msa0870550 AT1G30410.3 31.538 130 83 3 5 129 725 853 4.39e-11 67.4
Msa0870550 AT1G65410.1 31.890 254 125 11 536 758 85 321 1.63e-17 85.5
Msa0870550 AT3G13080.3 30.719 153 102 2 615 766 706 855 1.70e-17 88.2
Msa0870550 AT3G13080.3 34.737 95 61 1 14 107 758 852 6.35e-12 70.1
Msa0870550 AT3G13080.4 30.719 153 102 2 615 766 706 855 1.70e-17 88.2
Msa0870550 AT3G13080.4 34.737 95 61 1 14 107 758 852 6.35e-12 70.1
Msa0870550 AT5G06530.2 31.452 248 143 12 553 786 179 413 6.00e-16 82.8
Msa0870550 AT5G06530.1 31.452 248 143 12 553 786 179 413 6.00e-16 82.8
Msa0870550 AT5G06530.3 31.452 248 143 12 553 786 179 413 6.68e-16 82.4
Msa0870550 AT4G33460.1 29.464 224 121 7 550 761 56 254 7.38e-16 79.0
Msa0870550 AT3G25620.1 28.099 242 150 10 527 756 75 304 1.41e-14 77.4
Msa0870550 AT3G25620.2 28.959 221 135 9 548 756 94 304 1.43e-14 78.2
Msa0870550 AT1G31770.1 28.112 249 159 10 553 791 81 319 1.60e-14 78.2
Msa0870550 AT1G17840.1 33.641 217 127 9 553 759 69 278 2.54e-14 77.4
Msa0870550 AT2G37360.1 30.909 220 136 10 552 761 132 345 6.06e-14 76.3
Msa0870550 AT3G55110.1 33.333 213 129 9 564 767 102 310 7.55e-14 75.9
Msa0870550 AT2G13610.1 24.766 214 144 6 553 757 62 267 8.48e-14 75.9
Msa0870550 AT4G27420.1 26.400 250 166 8 553 791 66 308 1.18e-13 75.1
Msa0870550 AT3G55090.1 30.806 211 128 9 564 763 118 321 1.80e-13 74.7
Msa0870550 AT4G39850.3 26.728 217 142 8 536 748 448 651 2.19e-13 74.7
Msa0870550 AT4G39850.1 26.728 217 142 8 536 748 448 651 2.36e-13 74.7
Msa0870550 AT4G39850.4 26.728 217 142 8 536 748 448 651 2.36e-13 74.7
Msa0870550 AT4G39850.2 26.728 217 142 8 536 748 448 651 2.38e-13 74.7
Msa0870550 AT4G25750.1 28.761 226 138 8 552 765 29 243 2.71e-13 73.9
Msa0870550 AT5G19410.2 30.736 231 125 11 553 761 75 292 5.08e-13 73.2
Msa0870550 AT5G19410.1 30.303 231 126 11 553 761 66 283 5.47e-13 73.2
Msa0870550 AT3G55130.1 31.884 207 128 9 564 761 110 312 5.60e-13 73.2
Msa0870550 AT3G53510.1 30.909 220 136 10 552 761 125 338 6.45e-13 73.2
Msa0870550 AT1G71330.1 32.039 103 69 1 665 766 25 127 6.46e-13 71.2
Msa0870550 AT1G71330.1 35.106 94 60 1 14 106 30 123 1.26e-12 70.1
Msa0870550 AT5G61700.1 23.529 272 188 10 509 770 566 827 7.11e-13 73.2
Msa0870550 AT3G13220.1 29.796 245 150 13 553 786 106 339 8.85e-13 72.4
Msa0870550 AT5G06530.4 30.736 231 133 12 570 786 1 218 9.44e-13 72.0
Msa0870550 AT5G52860.1 29.412 221 140 7 547 761 38 248 1.37e-12 71.6
Msa0870550 AT2G39350.1 30.144 209 128 9 564 761 120 321 1.50e-12 71.6
Msa0870550 AT2G41700.1 27.727 220 139 6 568 781 582 787 1.59e-12 72.0
Msa0870550 AT2G41700.1 22.984 248 156 10 549 783 1470 1695 1.73e-12 72.0
Msa0870550 AT2G41700.2 27.727 220 139 6 568 781 512 717 1.76e-12 72.0
Msa0870550 AT2G41700.2 24.186 215 133 9 549 750 1428 1625 3.97e-12 70.9
Msa0870550 AT2G01320.7 28.444 225 126 11 552 756 89 298 1.92e-12 70.9
Msa0870550 AT2G01320.6 28.444 225 126 11 552 756 89 298 1.92e-12 70.9
Msa0870550 AT2G01320.8 28.444 225 126 11 552 756 89 298 2.08e-12 71.2
Msa0870550 AT2G01320.5 28.444 225 126 11 552 756 89 298 2.08e-12 71.2
Msa0870550 AT2G01320.3 28.444 225 126 11 552 756 89 298 2.92e-12 70.9
Msa0870550 AT2G01320.2 28.444 225 126 11 552 756 89 298 2.95e-12 70.9
Msa0870550 AT2G01320.1 28.444 225 126 11 552 756 89 298 2.99e-12 70.9
Msa0870550 AT2G01320.4 28.444 225 126 11 552 756 89 298 2.99e-12 70.9
Msa0870550 AT3G55100.1 29.018 224 133 9 553 761 51 263 3.25e-12 70.5
Msa0870550 AT3G55100.2 29.018 224 133 9 553 761 51 263 3.25e-12 70.5
Msa0870550 AT3G21090.1 30.516 213 122 10 546 748 41 237 5.42e-12 70.1
Msa0870550 AT1G51500.1 29.858 211 124 9 549 748 40 237 1.24e-11 68.9
Msa0870550 AT3G47780.1 24.793 242 149 10 545 771 622 845 1.31e-11 68.9
Msa0870550 AT5G61700.2 24.490 245 165 10 509 742 566 801 1.32e-11 68.9
Msa0870550 AT5G61700.4 24.490 245 165 10 509 742 566 801 1.32e-11 68.9
Msa0870550 AT5G61740.1 22.394 259 185 8 520 771 570 819 1.81e-11 68.6
Msa0870550 AT5G61740.2 22.394 259 185 8 520 771 536 785 1.84e-11 68.6
Msa0870550 AT1G53270.1 27.556 225 142 8 552 764 49 264 2.49e-11 67.8
Msa0870550 AT5G61740.3 22.394 259 185 8 520 771 431 680 2.70e-11 67.8

Find 147 sgRNAs with CRISPR-Local

Find 219 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATACCACATTGGCTTCTT+TGG 0.199950 6_1:+5039280 None:intergenic
CTGCAATGATGTCTGCATTT+TGG 0.220988 6_1:+5039993 None:intergenic
TTGTGATTTGATTGCTGTTT+TGG 0.232267 6_1:-5037273 Msa0870550:CDS
GAGAAGAGGTTCAAGGAAAT+TGG 0.234555 6_1:-5037015 Msa0870550:three_prime_UTR
GTAGTTATGCTTTGAGCTTT+TGG 0.248071 6_1:-5038138 Msa0870550:CDS
TGTTCAAAATGGTAAGATTA+TGG 0.250124 6_1:-5039969 Msa0870550:CDS
ATCATTGCAGTTGTTCAAAA+TGG 0.258914 6_1:-5039980 Msa0870550:CDS
TCCTATGATCGTTGATTTCC+CGG 0.268251 6_1:+5037769 None:intergenic
TGATCTTTATTCATGATAGA+TGG 0.270601 6_1:+5039848 None:intergenic
TCTATAATCATCAAAATTGT+AGG 0.276507 6_1:-5036963 Msa0870550:three_prime_UTR
ATGAGATCAAGAGGCAAATT+AGG 0.288853 6_1:-5039499 Msa0870550:CDS
ACATTCATCTTGGGCCTTGA+TGG 0.293255 6_1:+5038333 None:intergenic
GAACCCAGAGGTGTTGCTTT+TGG 0.311598 6_1:-5037414 Msa0870550:CDS
CCTGTGTATTCGTTTGGATT+GGG 0.321603 6_1:-5039557 Msa0870550:CDS
TTGGTAGGGGAAAGTGGTTC+CGG 0.322613 6_1:-5037788 Msa0870550:CDS
TTCCTATGATAATTACTATA+TGG 0.322839 6_1:-5036921 Msa0870550:three_prime_UTR
ATTAGACAATCTTGGTTTGC+TGG 0.327051 6_1:-5038196 Msa0870550:CDS
ACCTGTGTATTCGTTTGGAT+TGG 0.334609 6_1:-5039558 Msa0870550:CDS
CAAAGATTGTTGGCAATGAA+TGG 0.336210 6_1:-5039641 Msa0870550:CDS
TTTCATGACTTGGGCCTTGT+TGG 0.338132 6_1:+5038221 None:intergenic
TGGCTTTGTCTAGAGCTTCT+TGG 0.345070 6_1:+5040062 None:intergenic
ACTTACACAGGTAAGATCTT+TGG 0.352605 6_1:-5038527 Msa0870550:intron
AGAGTGGAAGCAAACATGTT+TGG 0.357523 6_1:-5039615 Msa0870550:CDS
ATTCATCTTTGTTGTCTAAA+GGG 0.360608 6_1:-5037220 Msa0870550:CDS
AGCTTCTTGGACAACTCTTT+CGG 0.360976 6_1:+5040075 None:intergenic
ATCTTTGGTGGGTGATAGAT+TGG 0.365517 6_1:-5038512 Msa0870550:CDS
TGGATTGGGGTCGGTCATAT+CGG 0.370182 6_1:-5039543 Msa0870550:CDS
ATTCAACCTGTGTATTCGTT+TGG 0.371836 6_1:-5039563 Msa0870550:CDS
TTCATGACTTGGGCCTTGTT+GGG 0.374959 6_1:+5038222 None:intergenic
CATTCATCTTTGTTGTCTAA+AGG 0.375005 6_1:-5037221 Msa0870550:CDS
GAGTGGAAGCAAACATGTTT+GGG 0.385673 6_1:-5039614 Msa0870550:CDS
CATCTTTACTACTACAGGTT+GGG 0.386303 6_1:-5040216 Msa0870550:CDS
CAATCTTGGTTTGCTGGCAT+TGG 0.391379 6_1:-5038190 Msa0870550:CDS
TGACCCTTTCTAAAGTATCT+TGG 0.392705 6_1:+5037348 None:intergenic
AGGGTTGGCTGTTATCTCAA+TGG 0.394186 6_1:-5039456 Msa0870550:CDS
CAAGAACCAACATTGTTTAG+TGG 0.394284 6_1:-5037638 Msa0870550:CDS
TAGAAACAACATATGATAAC+TGG 0.396082 6_1:+5038394 None:intergenic
ACATTATAGCTTTGCTTACA+TGG 0.396877 6_1:-5039417 Msa0870550:CDS
TTGTAACCTTCTATTTCATC+AGG 0.403191 6_1:+5037932 None:intergenic
ATGAAAGTATTAGACAATCT+TGG 0.404477 6_1:-5038204 Msa0870550:CDS
ATAAAAGAAAATATTGCATA+TGG 0.413206 6_1:-5037611 Msa0870550:CDS
AGCTGCATCTTTACTACTAC+AGG 0.416159 6_1:-5040221 Msa0870550:CDS
TCCTTCCTTTCAAAGATTGT+TGG 0.416339 6_1:-5039651 Msa0870550:CDS
TGCTGGAAAATCGACAGCTT+TGG 0.424357 6_1:-5037807 Msa0870550:CDS
TGGTAGGGGAAAGTGGTTCC+GGG 0.434001 6_1:-5037787 Msa0870550:CDS
GTCTAATACTTTCATGACTT+GGG 0.435511 6_1:+5038212 None:intergenic
TCATATGTTGTTTCTATACA+AGG 0.438419 6_1:-5038387 Msa0870550:CDS
TCATCCAAAAGCAACACCTC+TGG 0.441786 6_1:+5037410 None:intergenic
TTCATATCAAGCTTAAAAGA+TGG 0.448619 6_1:-5037521 Msa0870550:CDS
GTTGACTTAAAAGAGCTAGA+AGG 0.449939 6_1:+5039791 None:intergenic
TGTCTAATACTTTCATGACT+TGG 0.454780 6_1:+5038211 None:intergenic
AAACATGTTTGCTTCCACTC+TGG 0.467125 6_1:+5039617 None:intergenic
GAATCAACAATTATGTTGGT+TGG 0.467733 6_1:+5037155 None:intergenic
GAAAATTGAGAAGAGGTTCA+AGG 0.468156 6_1:-5037022 Msa0870550:three_prime_UTR
GATGTAGTTGTTGTGGTAAT+AGG 0.468181 6_1:-5037057 Msa0870550:three_prime_UTR
CTTATAATCTAAGGTCACTA+AGG 0.471616 6_1:-5037682 Msa0870550:CDS
ATCGAGCCTGATGAAATAGA+AGG 0.473781 6_1:-5037938 Msa0870550:CDS
TGTAGTTGATGATGATGATA+AGG 0.474842 6_1:-5039705 Msa0870550:CDS
AACTTCAAAAGTGAGTATCT+TGG 0.476527 6_1:+5039355 None:intergenic
GAAGGGATAGTGACAATTGA+TGG 0.477038 6_1:-5037719 Msa0870550:CDS
GAGAGAGGAGTTCAAATGTC+AGG 0.477043 6_1:-5040193 Msa0870550:CDS
GATGAAGATCAAAATTCTAC+CGG 0.478065 6_1:-5039323 Msa0870550:CDS
CTGTGTATTCGTTTGGATTG+GGG 0.490619 6_1:-5039556 Msa0870550:CDS
TCCGGGAAATCAACGATCAT+AGG 0.491027 6_1:-5037770 Msa0870550:CDS
GCCAACAATCTTTGAAAGGA+AGG 0.492056 6_1:+5039650 None:intergenic
CATTGCCAACAATCTTTGAA+AGG 0.495848 6_1:+5039646 None:intergenic
AACCATATAGTAATTATCAT+AGG 0.496299 6_1:+5036919 None:intergenic
ATATGGATCATATGATGATA+TGG 0.496598 6_1:-5037594 Msa0870550:CDS
TAGTCCAAGATACTTTAGAA+AGG 0.497021 6_1:-5037352 Msa0870550:CDS
TGAAATTATAGAGGCATCAA+AGG 0.505994 6_1:-5037561 Msa0870550:CDS
CTACTACAGGTTGGGGAGAG+AGG 0.508838 6_1:-5040208 Msa0870550:CDS
AAGTCTAGAGCAAACAGAAC+CGG 0.509465 6_1:+5039304 None:intergenic
GTAGTAATAGCATTCACAAT+GGG 0.510001 6_1:-5038463 Msa0870550:CDS
TACACAGGTAAGATCTTTGG+TGG 0.510332 6_1:-5038524 Msa0870550:intron
GGATAGTGACAATTGATGGT+AGG 0.510539 6_1:-5037715 Msa0870550:CDS
CATGATAGATGGGGTGTCGT+TGG 0.512430 6_1:+5039859 None:intergenic
TAGATGGGGTGTCGTTGGTT+TGG 0.512876 6_1:+5039864 None:intergenic
TGGGAGAGTACTTGACTAAG+AGG 0.513417 6_1:-5039397 Msa0870550:CDS
AGTCCAAGATACTTTAGAAA+GGG 0.513733 6_1:-5037351 Msa0870550:CDS
GCATCTTTACTACTACAGGT+TGG 0.515966 6_1:-5040217 Msa0870550:CDS
AGGTTCTATGATCCACTTGA+AGG 0.515979 6_1:-5037737 Msa0870550:CDS
ACTTTAGAAAGGGTCATGGT+TGG 0.516857 6_1:-5037341 Msa0870550:CDS
ATGGTACCACTAAACAATGT+TGG 0.517409 6_1:+5037632 None:intergenic
CATCCAAAAGCAACACCTCT+GGG 0.520536 6_1:+5037411 None:intergenic
GATACATTGTGTGGTGATAG+AGG 0.522055 6_1:-5037494 Msa0870550:CDS
AAGGGAAGTGTTGTTGAGAA+AGG 0.523547 6_1:-5037248 Msa0870550:CDS
TTTGCCTCTTGATCTCATCA+TGG 0.525676 6_1:+5039504 None:intergenic
CAAGGTTATATCTCAGCTAA+GGG 0.526283 6_1:-5038094 Msa0870550:CDS
GCAAGGTTATATCTCAGCTA+AGG 0.528905 6_1:-5038095 Msa0870550:CDS
ATCATCACATTTGGTCTAGA+CGG 0.529125 6_1:+5037857 None:intergenic
AATGTCAAGCAAAGCCATCA+AGG 0.532959 6_1:-5038347 Msa0870550:CDS
ATGACGAATGATCTTGCTAA+AGG 0.533890 6_1:-5038010 Msa0870550:CDS
GGAAAAGTTATTGCTGATGC+TGG 0.535323 6_1:-5038037 Msa0870550:CDS
CGATGAAAGTGAAATTATAG+AGG 0.538112 6_1:-5037570 Msa0870550:CDS
GAAAATCGACAGCTTTGGTA+GGG 0.539829 6_1:-5037802 Msa0870550:CDS
GATAGAGGAGTTCAACTTAG+TGG 0.543851 6_1:-5037479 Msa0870550:CDS
AATGGTAAGATTATGGAAAG+AGG 0.544279 6_1:-5039962 Msa0870550:CDS
ACAGCTTTGGTAGGGGAAAG+TGG 0.544349 6_1:-5037794 Msa0870550:CDS
GATCTTTATTCATGATAGAT+GGG 0.546201 6_1:+5039849 None:intergenic
GTATTCGTTTGGATTGGGGT+CGG 0.548150 6_1:-5039552 Msa0870550:CDS
CATTATAGCTTTGCTTACAT+GGG 0.552491 6_1:-5039416 Msa0870550:CDS
GATAGTGACAATTGATGGTA+GGG 0.555865 6_1:-5037714 Msa0870550:CDS
ATGAAAAGAAAATTGAGAAG+AGG 0.555915 6_1:-5037029 Msa0870550:three_prime_UTR
ATCTTTACTACTACAGGTTG+GGG 0.557058 6_1:-5040215 Msa0870550:CDS
TAGAAAGGGTCATGGTTGGA+AGG 0.557118 6_1:-5037337 Msa0870550:CDS
GGAAAATCGACAGCTTTGGT+AGG 0.558533 6_1:-5037803 Msa0870550:CDS
TTGTTTGTTGAAGACGAACA+AGG 0.571696 6_1:+5039894 None:intergenic
GCTCTAGACAAAGCCACCGT+TGG 0.573882 6_1:-5040055 Msa0870550:CDS
GGGTGATAGATTGGCTCTAG+TGG 0.574754 6_1:-5038503 Msa0870550:CDS
ATTGTCACTATCCCTTCAAG+TGG 0.575106 6_1:+5037725 None:intergenic
TGAAGAATCAACAATTATGT+TGG 0.576817 6_1:+5037151 None:intergenic
GATTGTGAAAACCGACGCAA+TGG 0.583680 6_1:+5037979 None:intergenic
TTGTTGTCTAAAGGGTCAAG+TGG 0.591126 6_1:-5037212 Msa0870550:CDS
AGAGAGGAGTTCAAATGTCA+GGG 0.594258 6_1:-5040192 Msa0870550:CDS
AGGTTCTGATGCCATTGCGT+CGG 0.597221 6_1:-5037990 Msa0870550:CDS
CAATGGGACTAATCATTGCA+TGG 0.598709 6_1:-5038447 Msa0870550:CDS
GATGATGGTGGTGCGTCCAA+CGG 0.599782 6_1:+5040039 None:intergenic
AGTTGATGATGTAGTTGTTG+TGG 0.600937 6_1:-5037064 Msa0870550:three_prime_UTR
ATGTTTGGGTTGTATAAATG+CGG 0.602306 6_1:-5039600 Msa0870550:CDS
AGATACTTTAGAAAGGGTCA+TGG 0.606118 6_1:-5037345 Msa0870550:CDS
TGTTTGTTGAAGACGAACAA+GGG 0.608457 6_1:+5039895 None:intergenic
GGTTCTATGATCCACTTGAA+GGG 0.609223 6_1:-5037736 Msa0870550:CDS
AAAATCGACAGCTTTGGTAG+GGG 0.621278 6_1:-5037801 Msa0870550:CDS
AGGACCATGATGAGATCAAG+AGG 0.626745 6_1:-5039508 Msa0870550:CDS
GGTGGGAAACTTGTGTCGCA+AGG 0.628793 6_1:-5038112 Msa0870550:CDS
GATGGTGGTGCGTCCAACGG+TGG 0.634455 6_1:+5040042 None:intergenic
ATCTTTATTCATGATAGATG+GGG 0.641505 6_1:+5039850 None:intergenic
AGTAGTAATAGCATTCACAA+TGG 0.643891 6_1:-5038464 Msa0870550:CDS
TTGAACTGCTATCATAACAA+TGG 0.647321 6_1:+5038417 None:intergenic
CGATCATAGGACTAATTGAG+AGG 0.648789 6_1:-5037757 Msa0870550:CDS
GGGAGAGTACTTGACTAAGA+GGG 0.657633 6_1:-5039396 Msa0870550:CDS
TAGGCGGTGAGCGATGATGA+TGG 0.663793 6_1:+5040024 None:intergenic
TTGTTGAAGACGAACAAGGG+AGG 0.670936 6_1:+5039898 None:intergenic
CCCAATCCAAACGAATACAC+AGG 0.672865 6_1:+5039557 None:intergenic
AGAGGAGTTCAAATGTCAGG+GGG 0.672943 6_1:-5040190 Msa0870550:CDS
AGAGGAGTTCAACTTAGTGG+TGG 0.673586 6_1:-5037476 Msa0870550:CDS
GATGGATATGATACATTGTG+TGG 0.682598 6_1:-5037503 Msa0870550:CDS
ACTTGCCAAAGAAGCCAATG+TGG 0.684674 6_1:-5039285 Msa0870550:intron
ACACAGGTAAGATCTTTGGT+GGG 0.690517 6_1:-5038523 Msa0870550:intron
ACTGAGGAGACATACCACAT+TGG 0.694166 6_1:+5039271 None:intergenic
GAGAGGAGTTCAAATGTCAG+GGG 0.698591 6_1:-5040191 Msa0870550:CDS
CATGGTTGGAAGGACAAGCG+TGG 0.699565 6_1:-5037327 Msa0870550:CDS
AAGGTTATATCTCAGCTAAG+GGG 0.702652 6_1:-5038093 Msa0870550:CDS
AGCTATATTGAAGAACCCAG+AGG 0.736668 6_1:-5037426 Msa0870550:CDS
GAGGAGTTCAAATGTCAGGG+GGG 0.745051 6_1:-5040189 Msa0870550:CDS
GCGGTGAGCGATGATGATGG+TGG 0.754165 6_1:+5040027 None:intergenic
TGGCAATGAATGGACCAGAG+TGG 0.761725 6_1:-5039631 Msa0870550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAATAAAATAAAACTG+AGG + chr6_1:5037881-5037900 None:intergenic 10.0%
!!! ACAATTTATGTTTATTTTTA+AGG - chr6_1:5038299-5038318 Msa0870550:CDS 10.0%
!! TTAAAAATAACAATTTAGTA+GGG + chr6_1:5038585-5038604 None:intergenic 10.0%
!!! ATTTAAGACTTTTATAATTT+TGG - chr6_1:5039065-5039084 Msa0870550:intron 10.0%
!!! ATTATAGAAATGAATTTTTT+TGG + chr6_1:5040158-5040177 None:intergenic 10.0%
!!! TTGCTTTAAATTTTGTATTT+TGG - chr6_1:5038050-5038069 Msa0870550:CDS 15.0%
!!! ATTATTATTTGTTAGAAAAG+AGG - chr6_1:5038225-5038244 Msa0870550:CDS 15.0%
!! GTTAAAAATAACAATTTAGT+AGG + chr6_1:5038586-5038605 None:intergenic 15.0%
!! ACATAAAAACTTATAATCTA+AGG - chr6_1:5039442-5039461 Msa0870550:CDS 15.0%
!!! ATATGCAATATTTTCTTTTA+TGG + chr6_1:5039523-5039542 None:intergenic 15.0%
!! ATAAAAGAAAATATTGCATA+TGG - chr6_1:5039522-5039541 Msa0870550:CDS 15.0%
!!! ATGAAATTTTTAATGTTTGA+AGG - chr6_1:5040029-5040048 Msa0870550:CDS 15.0%
!!! TGAAATTTTTAATGTTTGAA+GGG - chr6_1:5040030-5040049 Msa0870550:CDS 15.0%
!! TTGAGATGAAAAAGAATTTA+TGG + chr6_1:5038863-5038882 None:intergenic 20.0%
!!! TTTATAATTTTGGTAAGTAC+CGG - chr6_1:5039075-5039094 Msa0870550:intron 20.0%
!! TACAAAGCTAAAAAGTTAAT+AGG - chr6_1:5039219-5039238 Msa0870550:intron 20.0%
!!! TTTTCGATTAAAATTAATGC+TGG - chr6_1:5039309-5039328 Msa0870550:CDS 20.0%
!! TCTATAATCATCAAAATTGT+AGG - chr6_1:5040170-5040189 Msa0870550:CDS 20.0%
!! TTCCTATGATAATTACTATA+TGG - chr6_1:5040212-5040231 Msa0870550:CDS 20.0%
!! AACCATATAGTAATTATCAT+AGG + chr6_1:5040217-5040236 None:intergenic 20.0%
!! TTTTATTATAGCTCTTGCAA+TGG + chr6_1:5036986-5037005 None:intergenic 25.0%
!! TCATCTAGCAATAGAATTTT+TGG + chr6_1:5037012-5037031 None:intergenic 25.0%
! TGTTCAAAATGGTAAGATTA+TGG - chr6_1:5037164-5037183 Msa0870550:CDS 25.0%
! ATCTTTATTCATGATAGATG+GGG + chr6_1:5037286-5037305 None:intergenic 25.0%
! GATCTTTATTCATGATAGAT+GGG + chr6_1:5037287-5037306 None:intergenic 25.0%
! TGATCTTTATTCATGATAGA+TGG + chr6_1:5037288-5037307 None:intergenic 25.0%
! TAATAGTAAAAACGAGAAGA+AGG - chr6_1:5037452-5037471 Msa0870550:CDS 25.0%
!!! TGTATAAATGCGGTTTTATT+CGG - chr6_1:5037543-5037562 Msa0870550:CDS 25.0%
!!! ATTTATGCACTTTGTTTTCT+AGG - chr6_1:5037657-5037676 Msa0870550:CDS 25.0%
!!! TTTATGCACTTTGTTTTCTA+GGG - chr6_1:5037658-5037677 Msa0870550:CDS 25.0%
!! TTCACAAGTTGAAAGTAAAA+AGG - chr6_1:5038013-5038032 Msa0870550:CDS 25.0%
! TTGAAAGTAAAAAGGAATAG+AGG - chr6_1:5038021-5038040 Msa0870550:CDS 25.0%
! TGAAAGTAAAAAGGAATAGA+GGG - chr6_1:5038022-5038041 Msa0870550:CDS 25.0%
!!! TTATTGTTCGTCATTTTGAA+GGG - chr6_1:5038156-5038175 Msa0870550:CDS 25.0%
! GAATAAGCGTATTAAGTTAA+AGG - chr6_1:5038442-5038461 Msa0870550:CDS 25.0%
! ATAATATCATGAGTTCTCAA+TGG - chr6_1:5038521-5038540 Msa0870550:intron 25.0%
!!! GTTATTTTTAACACTTACAC+AGG - chr6_1:5038594-5038613 Msa0870550:intron 25.0%
! TAGAAACAACATATGATAAC+TGG + chr6_1:5038742-5038761 None:intergenic 25.0%
!!! TCATATGTTGTTTCTATACA+AGG - chr6_1:5038746-5038765 Msa0870550:intron 25.0%
!! TATTTTGCTACATTCATCTT+GGG + chr6_1:5038812-5038831 None:intergenic 25.0%
!!! ATGAAAGTATTAGACAATCT+TGG - chr6_1:5038929-5038948 Msa0870550:intron 25.0%
! ATATGGATCATATGATGATA+TGG - chr6_1:5039539-5039558 Msa0870550:CDS 25.0%
! TTCATATCAAGCTTAAAAGA+TGG - chr6_1:5039612-5039631 Msa0870550:CDS 25.0%
!! ATTCATCTTTGTTGTCTAAA+GGG - chr6_1:5039913-5039932 Msa0870550:CDS 25.0%
! TGAAGAATCAACAATTATGT+TGG + chr6_1:5039985-5040004 None:intergenic 25.0%
! ATGAAAAGAAAATTGAGAAG+AGG - chr6_1:5040104-5040123 Msa0870550:CDS 25.0%
!!! ATGAATTTTTTTGGAAGCTA+AGG + chr6_1:5040149-5040168 None:intergenic 25.0%
ATCATTGCAGTTGTTCAAAA+TGG - chr6_1:5037153-5037172 Msa0870550:CDS 30.0%
AATGGTAAGATTATGGAAAG+AGG - chr6_1:5037171-5037190 Msa0870550:CDS 30.0%
TCGTCTTCAACAAACAAAAA+AGG - chr6_1:5037245-5037264 Msa0870550:CDS 30.0%
!! TGTAGTTGATGATGATGATA+AGG - chr6_1:5037428-5037447 Msa0870550:CDS 30.0%
!! ATGTTTGGGTTGTATAAATG+CGG - chr6_1:5037533-5037552 Msa0870550:CDS 30.0%
!!! GGTCATATCGGTTTATTTTT+TGG - chr6_1:5037602-5037621 Msa0870550:CDS 30.0%
!!! CATATCGGTTTATTTTTTGG+AGG - chr6_1:5037605-5037624 Msa0870550:CDS 30.0%
! ACATTATAGCTTTGCTTACA+TGG - chr6_1:5037716-5037735 Msa0870550:CDS 30.0%
! CATTATAGCTTTGCTTACAT+GGG - chr6_1:5037717-5037736 Msa0870550:CDS 30.0%
AACTTCAAAAGTGAGTATCT+TGG + chr6_1:5037781-5037800 None:intergenic 30.0%
!!! AAGATACTCACTTTTGAAGT+TGG - chr6_1:5037780-5037799 Msa0870550:CDS 30.0%
GATGAAGATCAAAATTCTAC+CGG - chr6_1:5037810-5037829 Msa0870550:CDS 30.0%
TGAAAGATGCTTGTCTAATT+GGG + chr6_1:5038105-5038124 None:intergenic 30.0%
TTGAAAGATGCTTGTCTAAT+TGG + chr6_1:5038106-5038125 None:intergenic 30.0%
GAACAATAACAATTAGTGAC+AGG + chr6_1:5038145-5038164 None:intergenic 30.0%
!! GTTATTGTTCGTCATTTTGA+AGG - chr6_1:5038155-5038174 Msa0870550:CDS 30.0%
AGTAGTAATAGCATTCACAA+TGG - chr6_1:5038669-5038688 Msa0870550:intron 30.0%
GTAGTAATAGCATTCACAAT+GGG - chr6_1:5038670-5038689 Msa0870550:intron 30.0%
TTGAACTGCTATCATAACAA+TGG + chr6_1:5038719-5038738 None:intergenic 30.0%
! CTATTTTGCTACATTCATCT+TGG + chr6_1:5038813-5038832 None:intergenic 30.0%
GTCTAATACTTTCATGACTT+GGG + chr6_1:5038924-5038943 None:intergenic 30.0%
TGTCTAATACTTTCATGACT+TGG + chr6_1:5038925-5038944 None:intergenic 30.0%
TTGTAACCTTCTATTTCATC+AGG + chr6_1:5039204-5039223 None:intergenic 30.0%
CCTTCAAAAATCATCACATT+TGG + chr6_1:5039288-5039307 None:intergenic 30.0%
! CCAAATGTGATGATTTTTGA+AGG - chr6_1:5039285-5039304 Msa0870550:intron 30.0%
! CTTATAATCTAAGGTCACTA+AGG - chr6_1:5039451-5039470 Msa0870550:CDS 30.0%
CGATGAAAGTGAAATTATAG+AGG - chr6_1:5039563-5039582 Msa0870550:CDS 30.0%
!! TGAAATTATAGAGGCATCAA+AGG - chr6_1:5039572-5039591 Msa0870550:CDS 30.0%
! TAGTCCAAGATACTTTAGAA+AGG - chr6_1:5039781-5039800 Msa0870550:CDS 30.0%
! AGTCCAAGATACTTTAGAAA+GGG - chr6_1:5039782-5039801 Msa0870550:CDS 30.0%
!!! TTGTGATTTGATTGCTGTTT+TGG - chr6_1:5039860-5039879 Msa0870550:CDS 30.0%
!!! TTTGATTGCTGTTTTGGATA+AGG - chr6_1:5039866-5039885 Msa0870550:CDS 30.0%
!!! TTGATTGCTGTTTTGGATAA+GGG - chr6_1:5039867-5039886 Msa0870550:CDS 30.0%
! CATTCATCTTTGTTGTCTAA+AGG - chr6_1:5039912-5039931 Msa0870550:CDS 30.0%
GAATCAACAATTATGTTGGT+TGG + chr6_1:5039981-5040000 None:intergenic 30.0%
CATCTTTACTACTACAGGTT+GGG - chr6_1:5036917-5036936 Msa0870550:three_prime_UTR 35.0%
ATCTTTACTACTACAGGTTG+GGG - chr6_1:5036918-5036937 Msa0870550:three_prime_UTR 35.0%
! AATGATGTCTGCATTTTGGA+TGG + chr6_1:5037139-5037158 None:intergenic 35.0%
! TGTTTGTTGAAGACGAACAA+GGG + chr6_1:5037241-5037260 None:intergenic 35.0%
! TTGTTTGTTGAAGACGAACA+AGG + chr6_1:5037242-5037261 None:intergenic 35.0%
! GTTGACTTAAAAGAGCTAGA+AGG + chr6_1:5037345-5037364 None:intergenic 35.0%
TAAAAACGAGAAGAAGGTTG+AGG - chr6_1:5037458-5037477 Msa0870550:CDS 35.0%
TCCTTCCTTTCAAAGATTGT+TGG - chr6_1:5037482-5037501 Msa0870550:CDS 35.0%
CATTGCCAACAATCTTTGAA+AGG + chr6_1:5037490-5037509 None:intergenic 35.0%
CAAAGATTGTTGGCAATGAA+TGG - chr6_1:5037492-5037511 Msa0870550:CDS 35.0%
ATTCAACCTGTGTATTCGTT+TGG - chr6_1:5037570-5037589 Msa0870550:CDS 35.0%
ATGAGATCAAGAGGCAAATT+AGG - chr6_1:5037634-5037653 Msa0870550:CDS 35.0%
!!! TACTCACTTTTGAAGTTGGT+TGG - chr6_1:5037784-5037803 Msa0870550:CDS 35.0%
GAAAGATGCTTGTCTAATTG+GGG + chr6_1:5038104-5038123 None:intergenic 35.0%
TAGTGACAGGAAAAAGAACT+AGG + chr6_1:5038132-5038151 None:intergenic 35.0%
!! TTCTCTTTGAAGGTGTCAAA+GGG + chr6_1:5038350-5038369 None:intergenic 35.0%
!! TTTCTCTTTGAAGGTGTCAA+AGG + chr6_1:5038351-5038370 None:intergenic 35.0%
CTCTATCTCTTTCTCTTTGA+AGG + chr6_1:5038360-5038379 None:intergenic 35.0%
ACTTACACAGGTAAGATCTT+TGG - chr6_1:5038606-5038625 Msa0870550:intron 35.0%
! TGCTTGACATTTTCTTGAGA+AGG + chr6_1:5038777-5038796 None:intergenic 35.0%
ATGCTTGAAAAATCCCAACA+AGG - chr6_1:5038898-5038917 Msa0870550:intron 35.0%
!! ATTAGACAATCTTGGTTTGC+TGG - chr6_1:5038937-5038956 Msa0870550:intron 35.0%
!! GTAGTTATGCTTTGAGCTTT+TGG - chr6_1:5038995-5039014 Msa0870550:intron 35.0%
!! TATGCTTTGAGCTTTTGGTA+TGG - chr6_1:5039000-5039019 Msa0870550:intron 35.0%
CAAGGTTATATCTCAGCTAA+GGG - chr6_1:5039039-5039058 Msa0870550:intron 35.0%
AAGGTTATATCTCAGCTAAG+GGG - chr6_1:5039040-5039059 Msa0870550:intron 35.0%
! AGCATCAGCAATAACTTTTC+CGG + chr6_1:5039097-5039116 None:intergenic 35.0%
ATGACGAATGATCTTGCTAA+AGG - chr6_1:5039123-5039142 Msa0870550:intron 35.0%
! CGATTTTCGTATACCTATCA+AGG + chr6_1:5039179-5039198 None:intergenic 35.0%
ATCATCACATTTGGTCTAGA+CGG + chr6_1:5039279-5039298 None:intergenic 35.0%
! GATAGTGACAATTGATGGTA+GGG - chr6_1:5039419-5039438 Msa0870550:CDS 35.0%
CAAGAACCAACATTGTTTAG+TGG - chr6_1:5039495-5039514 Msa0870550:CDS 35.0%
ATGGTACCACTAAACAATGT+TGG + chr6_1:5039504-5039523 None:intergenic 35.0%
GATGGATATGATACATTGTG+TGG - chr6_1:5039630-5039649 Msa0870550:CDS 35.0%
!! TGACCCTTTCTAAAGTATCT+TGG + chr6_1:5039788-5039807 None:intergenic 35.0%
! AGATACTTTAGAAAGGGTCA+TGG - chr6_1:5039788-5039807 Msa0870550:CDS 35.0%
!! AGTTGATGATGTAGTTGTTG+TGG - chr6_1:5040069-5040088 Msa0870550:CDS 35.0%
GATGTAGTTGTTGTGGTAAT+AGG - chr6_1:5040076-5040095 Msa0870550:CDS 35.0%
GAAAATTGAGAAGAGGTTCA+AGG - chr6_1:5040111-5040130 Msa0870550:CDS 35.0%
AGCTGCATCTTTACTACTAC+AGG - chr6_1:5036912-5036931 Msa0870550:three_prime_UTR 40.0%
GCATCTTTACTACTACAGGT+TGG - chr6_1:5036916-5036935 Msa0870550:three_prime_UTR 40.0%
AGAGAGGAGTTCAAATGTCA+GGG - chr6_1:5036941-5036960 Msa0870550:three_prime_UTR 40.0%
AGCTTCTTGGACAACTCTTT+CGG + chr6_1:5037061-5037080 None:intergenic 40.0%
! CTGCAATGATGTCTGCATTT+TGG + chr6_1:5037143-5037162 None:intergenic 40.0%
! GAGAATTTTCATCTTGCACG+AGG + chr6_1:5037209-5037228 None:intergenic 40.0%
!! TCTTTTAAGTCAACAACGCG+AGG - chr6_1:5037351-5037370 Msa0870550:CDS 40.0%
! GCCAACAATCTTTGAAAGGA+AGG + chr6_1:5037486-5037505 None:intergenic 40.0%
AAACATGTTTGCTTCCACTC+TGG + chr6_1:5037519-5037538 None:intergenic 40.0%
AGAGTGGAAGCAAACATGTT+TGG - chr6_1:5037518-5037537 Msa0870550:CDS 40.0%
GAGTGGAAGCAAACATGTTT+GGG - chr6_1:5037519-5037538 Msa0870550:CDS 40.0%
ACCTGTGTATTCGTTTGGAT+TGG - chr6_1:5037575-5037594 Msa0870550:CDS 40.0%
CCTGTGTATTCGTTTGGATT+GGG - chr6_1:5037576-5037595 Msa0870550:CDS 40.0%
CTGTGTATTCGTTTGGATTG+GGG - chr6_1:5037577-5037596 Msa0870550:CDS 40.0%
TTTGCCTCTTGATCTCATCA+TGG + chr6_1:5037632-5037651 None:intergenic 40.0%
!!! TGCACTTTGTTTTCTAGGGT+TGG - chr6_1:5037662-5037681 Msa0870550:CDS 40.0%
! AAGTCTAGAGCAAACAGAAC+CGG + chr6_1:5037832-5037851 None:intergenic 40.0%
!! ACATACCACATTGGCTTCTT+TGG + chr6_1:5037856-5037875 None:intergenic 40.0%
!!! GAAGGTGTCAAAGGGTTTTT+GGG + chr6_1:5038342-5038361 None:intergenic 40.0%
!!! TGAAGGTGTCAAAGGGTTTT+TGG + chr6_1:5038343-5038362 None:intergenic 40.0%
TACACAGGTAAGATCTTTGG+TGG - chr6_1:5038609-5038628 Msa0870550:intron 40.0%
ACACAGGTAAGATCTTTGGT+GGG - chr6_1:5038610-5038629 Msa0870550:intron 40.0%
! ATCTTTGGTGGGTGATAGAT+TGG - chr6_1:5038621-5038640 Msa0870550:intron 40.0%
CAATGGGACTAATCATTGCA+TGG - chr6_1:5038686-5038705 Msa0870550:intron 40.0%
AATGTCAAGCAAAGCCATCA+AGG - chr6_1:5038786-5038805 Msa0870550:intron 40.0%
! CTTTGAGCTTTTGGTATGGT+GGG - chr6_1:5039004-5039023 Msa0870550:intron 40.0%
GCAAGGTTATATCTCAGCTA+AGG - chr6_1:5039038-5039057 Msa0870550:intron 40.0%
GGAAAAGTTATTGCTGATGC+TGG - chr6_1:5039096-5039115 Msa0870550:intron 40.0%
! CGGTTTTCACAATCCTTGAT+AGG - chr6_1:5039163-5039182 Msa0870550:intron 40.0%
ATCGAGCCTGATGAAATAGA+AGG - chr6_1:5039195-5039214 Msa0870550:intron 40.0%
! GAAAATCGACAGCTTTGGTA+GGG - chr6_1:5039331-5039350 Msa0870550:CDS 40.0%
! AAAATCGACAGCTTTGGTAG+GGG - chr6_1:5039332-5039351 Msa0870550:CDS 40.0%
!! TCCTATGATCGTTGATTTCC+CGG + chr6_1:5039367-5039386 None:intergenic 40.0%
CGATCATAGGACTAATTGAG+AGG - chr6_1:5039376-5039395 Msa0870550:CDS 40.0%
AGGTTCTATGATCCACTTGA+AGG - chr6_1:5039396-5039415 Msa0870550:CDS 40.0%
GGTTCTATGATCCACTTGAA+GGG - chr6_1:5039397-5039416 Msa0870550:CDS 40.0%
ATTGTCACTATCCCTTCAAG+TGG + chr6_1:5039411-5039430 None:intergenic 40.0%
GAAGGGATAGTGACAATTGA+TGG - chr6_1:5039414-5039433 Msa0870550:CDS 40.0%
! GGATAGTGACAATTGATGGT+AGG - chr6_1:5039418-5039437 Msa0870550:CDS 40.0%
GATACATTGTGTGGTGATAG+AGG - chr6_1:5039639-5039658 Msa0870550:CDS 40.0%
GATAGAGGAGTTCAACTTAG+TGG - chr6_1:5039654-5039673 Msa0870550:CDS 40.0%
AGCTATATTGAAGAACCCAG+AGG - chr6_1:5039707-5039726 Msa0870550:CDS 40.0%
! ACTTTAGAAAGGGTCATGGT+TGG - chr6_1:5039792-5039811 Msa0870550:CDS 40.0%
!! AAGGGAAGTGTTGTTGAGAA+AGG - chr6_1:5039885-5039904 Msa0870550:CDS 40.0%
TTGTTGTCTAAAGGGTCAAG+TGG - chr6_1:5039921-5039940 Msa0870550:CDS 40.0%
GAGAAGAGGTTCAAGGAAAT+TGG - chr6_1:5040118-5040137 Msa0870550:CDS 40.0%
GAGAGAGGAGTTCAAATGTC+AGG - chr6_1:5036940-5036959 Msa0870550:three_prime_UTR 45.0%
GAGAGGAGTTCAAATGTCAG+GGG - chr6_1:5036942-5036961 Msa0870550:three_prime_UTR 45.0%
AGAGGAGTTCAAATGTCAGG+GGG - chr6_1:5036943-5036962 Msa0870550:three_prime_UTR 45.0%
!! TGGCTTTGTCTAGAGCTTCT+TGG + chr6_1:5037074-5037093 None:intergenic 45.0%
!!! CATTTTGGATGGTGGATAGG+CGG + chr6_1:5037128-5037147 None:intergenic 45.0%
!!! CTGCATTTTGGATGGTGGAT+AGG + chr6_1:5037131-5037150 None:intergenic 45.0%
! GATGTCTGCATTTTGGATGG+TGG + chr6_1:5037136-5037155 None:intergenic 45.0%
TTGTTGAAGACGAACAAGGG+AGG + chr6_1:5037238-5037257 None:intergenic 45.0%
CCCAATCCAAACGAATACAC+AGG + chr6_1:5037579-5037598 None:intergenic 45.0%
! GTATTCGTTTGGATTGGGGT+CGG - chr6_1:5037581-5037600 Msa0870550:CDS 45.0%
AGGACCATGATGAGATCAAG+AGG - chr6_1:5037625-5037644 Msa0870550:CDS 45.0%
!! AGGGTTGGCTGTTATCTCAA+TGG - chr6_1:5037677-5037696 Msa0870550:CDS 45.0%
!! TGGGAGAGTACTTGACTAAG+AGG - chr6_1:5037736-5037755 Msa0870550:CDS 45.0%
!! GGGAGAGTACTTGACTAAGA+GGG - chr6_1:5037737-5037756 Msa0870550:CDS 45.0%
ACTTGCCAAAGAAGCCAATG+TGG - chr6_1:5037848-5037867 Msa0870550:CDS 45.0%
ACTGAGGAGACATACCACAT+TGG + chr6_1:5037865-5037884 None:intergenic 45.0%
ACATTCATCTTGGGCCTTGA+TGG + chr6_1:5038803-5038822 None:intergenic 45.0%
!! TTCATGACTTGGGCCTTGTT+GGG + chr6_1:5038914-5038933 None:intergenic 45.0%
! TTTCATGACTTGGGCCTTGT+TGG + chr6_1:5038915-5038934 None:intergenic 45.0%
!! CAATCTTGGTTTGCTGGCAT+TGG - chr6_1:5038943-5038962 Msa0870550:intron 45.0%
!! GCTTTGAGCTTTTGGTATGG+TGG - chr6_1:5039003-5039022 Msa0870550:intron 45.0%
GATTGTGAAAACCGACGCAA+TGG + chr6_1:5039157-5039176 None:intergenic 45.0%
TGCTGGAAAATCGACAGCTT+TGG - chr6_1:5039326-5039345 Msa0870550:CDS 45.0%
! GGAAAATCGACAGCTTTGGT+AGG - chr6_1:5039330-5039349 Msa0870550:CDS 45.0%
TCCGGGAAATCAACGATCAT+AGG - chr6_1:5039363-5039382 Msa0870550:CDS 45.0%
AGAGGAGTTCAACTTAGTGG+TGG - chr6_1:5039657-5039676 Msa0870550:CDS 45.0%
CATCCAAAAGCAACACCTCT+GGG + chr6_1:5039725-5039744 None:intergenic 45.0%
TCATCCAAAAGCAACACCTC+TGG + chr6_1:5039726-5039745 None:intergenic 45.0%
TAGAAAGGGTCATGGTTGGA+AGG - chr6_1:5039796-5039815 Msa0870550:CDS 45.0%
!! ATATAATATAAAAAATTACA+AGG - chr6_1:5037927-5037946 Msa0870550:CDS 5.0%
!! TATAATATAAAAAATTACAA+GGG - chr6_1:5037928-5037947 Msa0870550:CDS 5.0%
GAGGAGTTCAAATGTCAGGG+GGG - chr6_1:5036944-5036963 Msa0870550:three_prime_UTR 50.0%
!! TAGATGGGGTGTCGTTGGTT+TGG + chr6_1:5037272-5037291 None:intergenic 50.0%
!! CATGATAGATGGGGTGTCGT+TGG + chr6_1:5037277-5037296 None:intergenic 50.0%
TGGCAATGAATGGACCAGAG+TGG - chr6_1:5037502-5037521 Msa0870550:CDS 50.0%
! TGGATTGGGGTCGGTCATAT+CGG - chr6_1:5037590-5037609 Msa0870550:CDS 50.0%
!! GGGTGATAGATTGGCTCTAG+TGG - chr6_1:5038630-5038649 Msa0870550:intron 50.0%
! AGGTTCTGATGCCATTGCGT+CGG - chr6_1:5039143-5039162 Msa0870550:intron 50.0%
! ACAGCTTTGGTAGGGGAAAG+TGG - chr6_1:5039339-5039358 Msa0870550:CDS 50.0%
TTGGTAGGGGAAAGTGGTTC+CGG - chr6_1:5039345-5039364 Msa0870550:CDS 50.0%
!!! GAACCCAGAGGTGTTGCTTT+TGG - chr6_1:5039719-5039738 Msa0870550:CDS 50.0%
! CTACTACAGGTTGGGGAGAG+AGG - chr6_1:5036925-5036944 Msa0870550:three_prime_UTR 55.0%
TGTCAGGGGGGCAAAAGCAA+AGG - chr6_1:5036956-5036975 Msa0870550:three_prime_UTR 55.0%
! GCTCTAGACAAAGCCACCGT+TGG - chr6_1:5037078-5037097 Msa0870550:three_prime_UTR 55.0%
!! GATGATGGTGGTGCGTCCAA+CGG + chr6_1:5037097-5037116 None:intergenic 55.0%
TAGGCGGTGAGCGATGATGA+TGG + chr6_1:5037112-5037131 None:intergenic 55.0%
GGTGGGAAACTTGTGTCGCA+AGG - chr6_1:5039021-5039040 Msa0870550:intron 55.0%
TGGTAGGGGAAAGTGGTTCC+GGG - chr6_1:5039346-5039365 Msa0870550:CDS 55.0%
CATGGTTGGAAGGACAAGCG+TGG - chr6_1:5039806-5039825 Msa0870550:CDS 55.0%
CAAGCGTGGTTGTAGCGCAT+AGG - chr6_1:5039820-5039839 Msa0870550:CDS 55.0%
!! GCGGTGAGCGATGATGATGG+TGG + chr6_1:5037109-5037128 None:intergenic 60.0%
! GATGGTGGTGCGTCCAACGG+TGG + chr6_1:5037094-5037113 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 5036895 5040260 5036895 ID=Msa0870550;Name=Msa0870550
chr6_1 mRNA 5036895 5040260 5036895 ID=Msa0870550-mRNA-1;Parent=Msa0870550;Name=Msa0870550-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|241|792
chr6_1 exon 5036895 5038539 5036895 ID=Msa0870550-mRNA-1:exon:1613;Parent=Msa0870550-mRNA-1
chr6_1 exon 5039286 5040260 5039286 ID=Msa0870550-mRNA-1:exon:1612;Parent=Msa0870550-mRNA-1
chr6_1 CDS 5039286 5040260 5039286 ID=Msa0870550-mRNA-1:cds;Parent=Msa0870550-mRNA-1
chr6_1 CDS 5037136 5038539 5037136 ID=Msa0870550-mRNA-1:cds;Parent=Msa0870550-mRNA-1
chr6_1 three_prime_UTR 5036895 5037135 5036895 ID=Msa0870550-mRNA-1:three_prime_utr;Parent=Msa0870550-mRNA-1
Gene Sequence

>Msa0870550

ATGGCTGACACATTATTAGCTGCATCTTTACTACTACAGGTTGGGGAGAGAGGAGTTCAAATGTCAGGGGGGCAAAAGCAAAGGATTGCCATTGCAAGAGCTATAATAAAAATGCCAAAAATTCTATTGCTAGATGAAGCAACAAGTGCACTCGATTCTGAATCCGAAAGAGTTGTCCAAGAAGCTCTAGACAAAGCCACCGTTGGACGCACCACCATCATCATCGCTCACCGCCTATCCACCATCCAAAATGCAGACATCATTGCAGTTGTTCAAAATGGTAAGATTATGGAAAGAGGATCTCACGAAAGCCTCGTGCAAGATGAAAATTCTCTTTATGCCTCCCTTGTTCGTCTTCAACAAACAAAAAAGGACCAAACCAACGACACCCCATCTATCATGAATAAAGATCACATGCAAAACACGAGTACTTGTAGACTCGTGAGTCCTTCTAGCTCTTTTAAGTCAACAACGCGAGGTAGTGATGATGTTTTTAACTATAATAATGTCGTTGAAGATGTTGTTACTAAATTTGTAGTTGATGATGATGATAAGGATAATAGTAAAAACGAGAAGAAGGTTGAGGCTCCTTCCTTTCAAAGATTGTTGGCAATGAATGGACCAGAGTGGAAGCAAACATGTTTGGGTTGTATAAATGCGGTTTTATTCGGTGCAATTCAACCTGTGTATTCGTTTGGATTGGGGTCGGTCATATCGGTTTATTTTTTGGAGGACCATGATGAGATCAAGAGGCAAATTAGGATTTATGCACTTTGTTTTCTAGGGTTGGCTGTTATCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGGTTAGAGAAAAAATGTTTTCCAAGATACTCACTTTTGAAGTTGGTTGGTTTGATGAAGATCAAAATTCTACCGGTTCTGTTTGCTCTAGACTTGCCAAAGAAGCCAATGTGGTAAGATCTTTGGTGGGTGATAGATTGGCTCTAGTGGTACAAACAATTTCAGCAGTAGTAATAGCATTCACAATGGGACTAATCATTGCATGGAGACTAGCCATTGTTATGATAGCAGTTCAACCAGTTATCATATGTTGTTTCTATACAAGGTGTGTCCTTCTCAAGAAAATGTCAAGCAAAGCCATCAAGGCCCAAGATGAATGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTTAGAACCATAAATTCTTTTTCATCTCAAGAGAGAATTCTCAAAATGCTTGAAAAATCCCAACAAGGCCCAAGTCATGAAAGTATTAGACAATCTTGGTTTGCTGGCATTGGACTTGCATGTGCACAAAGTATCAAATTATGTAGTTATGCTTTGAGCTTTTGGTATGGTGGGAAACTTGTGTCGCAAGGTTATATCTCAGCTAAGGGGTTATTTAAGACTTTTATAATTTTGGTAAGTACCGGAAAAGTTATTGCTGATGCTGGTAGCATGACGAATGATCTTGCTAAAGGTTCTGATGCCATTGCGTCGGTTTTCACAATCCTTGATAGGTATACGAAAATCGAGCCTGATGAAATAGAAGGTTACAAAGCTAAAAAGTTAATAGGAAAAATTGAATTTTGTGATGTATATTTTGCATATCCGTCTAGACCAAATGTGATGATTTTTGAAGGATTTTCGATTAAAATTAATGCTGGAAAATCGACAGCTTTGGTAGGGGAAAGTGGTTCCGGGAAATCAACGATCATAGGACTAATTGAGAGGTTCTATGATCCACTTGAAGGGATAGTGACAATTGATGGTAGGGACATAAAAACTTATAATCTAAGGTCACTAAGGAAACACATTGCACTTGTGAGTCAAGAACCAACATTGTTTAGTGGTACCATAAAAGAAAATATTGCATATGGATCATATGATGATATGGTCGATGAAAGTGAAATTATAGAGGCATCAAAGGCTGCAAATGCTCATGATTTCATATCAAGCTTAAAAGATGGATATGATACATTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAGCAAAGACTTGCAATAGCTAGAGCTATATTGAAGAACCCAGAGGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAAATTAGTCCAAGATACTTTAGAAAGGGTCATGGTTGGAAGGACAAGCGTGGTTGTAGCGCATAGGTTGAGTACTATACAAAATTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCTAAAGGGTCAAGTGGAGCATATTACTCTTTGATAAGTCTACAAAGAAGACCAACCAACATAATTGTTGATTCTTCACATGAAATCAACTAA
Protein sequence

>Msa0870550

MADTLLAASLLLQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKATVGRTTIIIAHRLSTIQNADIIAVVQNGKIMERGSHESLVQDENSLYASLVRLQQTKKDQTNDTPSIMNKDHMQNTSTCRLVSPSSSFKSTTRGSDDVFNYNNVVEDVVTKFVVDDDDKDNSKNEKKVEAPSFQRLLAMNGPEWKQTCLGCINAVLFGAIQPVYSFGLGSVISVYFLEDHDEIKRQIRIYALCFLGLAVISMVVNVLQHYSFAYMGEYLTKRVREKMFSKILTFEVGWFDEDQNSTGSVCSRLAKEANVVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPVIICCFYTRCVLLKKMSSKAIKAQDECSKIAAEAVSNLRTINSFSSQERILKMLEKSQQGPSHESIRQSWFAGIGLACAQSIKLCSYALSFWYGGKLVSQGYISAKGLFKTFIILVSTGKVIADAGSMTNDLAKGSDAIASVFTILDRYTKIEPDEIEGYKAKKLIGKIEFCDVYFAYPSRPNVMIFEGFSIKINAGKSTALVGESGSGKSTIIGLIERFYDPLEGIVTIDGRDIKTYNLRSLRKHIALVSQEPTLFSGTIKENIAYGSYDDMVDESEIIEASKAANAHDFISSLKDGYDTLCGDRGVQLSGGQKQRLAIARAILKNPEVLLLDEATSALDSQSEKLVQDTLERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVEKGTHSSLLSKGSSGAYYSLISLQRRPTNIIVDSSHEIN*