Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220290 | XP_013465032.1 | 76.256 | 219 | 37 | 3 | 4 | 216 | 31 | 240 | 3.70e-103 | 319 |
| Msa0220290 | XP_013465032.1 | 96.000 | 250 | 10 | 0 | 214 | 463 | 23 | 272 | 3.29e-166 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220290 | sp|Q9ZQZ9|TI204_ARATH | 46.025 | 239 | 119 | 4 | 226 | 462 | 52 | 282 | 6.15e-71 | 229 |
| Msa0220290 | sp|Q9ZQZ9|TI204_ARATH | 43.662 | 213 | 103 | 6 | 16 | 216 | 44 | 251 | 3.84e-49 | 172 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220290 | A0A072VB93 | 76.256 | 219 | 37 | 3 | 4 | 216 | 31 | 240 | 1.77e-103 | 319 |
| Msa0220290 | A0A072VB93 | 96.000 | 250 | 10 | 0 | 214 | 463 | 23 | 272 | 1.57e-166 | 479 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011500 | Msa0220290 | -0.800940 | 1.138652e-48 | -8.615850e-47 |
| Msa0014570 | Msa0220290 | -0.808375 | 3.194588e-50 | -8.615850e-47 |
| Msa0017510 | Msa0220290 | -0.827207 | 1.777221e-54 | -8.615850e-47 |
| Msa0025330 | Msa0220290 | -0.813167 | 2.935528e-51 | -8.615850e-47 |
| Msa0028640 | Msa0220290 | -0.816935 | 4.278088e-52 | -8.615850e-47 |
| Msa0048000 | Msa0220290 | -0.815187 | 1.051048e-51 | -8.615850e-47 |
| Msa0055720 | Msa0220290 | -0.811737 | 6.026358e-51 | -8.615850e-47 |
| Msa0060400 | Msa0220290 | -0.801830 | 7.481341e-49 | -8.615850e-47 |
| Msa0072900 | Msa0220290 | -0.810816 | 9.548072e-51 | -8.615850e-47 |
| Msa0101810 | Msa0220290 | 0.827946 | 1.181491e-54 | -8.615850e-47 |
| Msa0110970 | Msa0220290 | -0.811180 | 7.965778e-51 | -8.615850e-47 |
| Msa0121090 | Msa0220290 | -0.817997 | 2.466065e-52 | -8.615850e-47 |
| Msa0133980 | Msa0220290 | 0.814579 | 1.433865e-51 | -8.615850e-47 |
| Msa0142460 | Msa0220290 | -0.803065 | 4.165023e-49 | -8.615850e-47 |
| Msa0152430 | Msa0220290 | -0.803562 | 3.285906e-49 | -8.615850e-47 |
| Msa0157290 | Msa0220290 | -0.827462 | 1.543749e-54 | -8.615850e-47 |
| Msa0160130 | Msa0220290 | -0.820877 | 5.436528e-53 | -8.615850e-47 |
| Msa0169860 | Msa0220290 | -0.801237 | 9.899200e-49 | -8.615850e-47 |
| Msa0170140 | Msa0220290 | -0.808738 | 2.672820e-50 | -8.615850e-47 |
| Msa0191250 | Msa0220290 | -0.811387 | 7.181271e-51 | -8.615850e-47 |
| Msa0200260 | Msa0220290 | -0.805108 | 1.565517e-49 | -8.615850e-47 |
| Msa0220290 | Msa0220740 | -0.801004 | 1.104846e-48 | -8.615850e-47 |
| Msa0220290 | Msa0243100 | -0.813957 | 1.967303e-51 | -8.615850e-47 |
| Msa0220290 | Msa0244860 | -0.842169 | 3.046877e-58 | -8.615850e-47 |
| Msa0220290 | Msa0259500 | -0.838786 | 2.338325e-57 | -8.615850e-47 |
| Msa0220290 | Msa0260810 | -0.812318 | 4.502690e-51 | -8.615850e-47 |
| Msa0220290 | Msa0261340 | -0.831579 | 1.540926e-55 | -8.615850e-47 |
| Msa0220290 | Msa0264780 | -0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0220290 | Msa0283450 | -0.843669 | 1.215667e-58 | -8.615850e-47 |
| Msa0220290 | Msa0283520 | -0.832037 | 1.187700e-55 | -8.615850e-47 |
| Msa0220290 | Msa0287650 | -0.836610 | 8.458978e-57 | -8.615850e-47 |
| Msa0220290 | Msa0299420 | 0.803429 | 3.500988e-49 | -8.615850e-47 |
| Msa0220290 | Msa0300270 | -0.805120 | 1.556211e-49 | -8.615850e-47 |
| Msa0220290 | Msa0305700 | -0.844217 | 8.666941e-59 | -8.615850e-47 |
| Msa0220290 | Msa0311860 | -0.805278 | 1.442095e-49 | -8.615850e-47 |
| Msa0220290 | Msa0315260 | 0.833577 | 4.924705e-56 | -8.615850e-47 |
| Msa0220290 | Msa0317730 | -0.827054 | 1.933590e-54 | -8.615850e-47 |
| Msa0220290 | Msa0317740 | -0.804250 | 2.363838e-49 | -8.615850e-47 |
| Msa0220290 | Msa0332000 | -0.838932 | 2.143609e-57 | -8.615850e-47 |
| Msa0220290 | Msa0338110 | -0.806070 | 9.831592e-50 | -8.615850e-47 |
| Msa0220290 | Msa0341540 | -0.837383 | 5.369516e-57 | -8.615850e-47 |
| Msa0220290 | Msa0356890 | 0.836745 | 7.813663e-57 | -8.615850e-47 |
| Msa0220290 | Msa0363200 | -0.805753 | 1.146414e-49 | -8.615850e-47 |
| Msa0220290 | Msa0376590 | -0.813588 | 2.372013e-51 | -8.615850e-47 |
| Msa0220290 | Msa0388960 | -0.818345 | 2.057843e-52 | -8.615850e-47 |
| Msa0220290 | Msa0410650 | -0.835364 | 1.752045e-56 | -8.615850e-47 |
| Msa0220290 | Msa0417880 | -0.803357 | 3.622966e-49 | -8.615850e-47 |
| Msa0220290 | Msa0422280 | -0.809788 | 1.591343e-50 | -8.615850e-47 |
| Msa0220290 | Msa0422850 | -0.820229 | 7.659608e-53 | -8.615850e-47 |
| Msa0220290 | Msa0422930 | -0.823524 | 1.322682e-53 | -8.615850e-47 |
| Msa0220290 | Msa0436370 | -0.826587 | 2.500226e-54 | -8.615850e-47 |
| Msa0220290 | Msa0437560 | -0.819991 | 8.683592e-53 | -8.615850e-47 |
| Msa0220290 | Msa0448550 | 0.829533 | 4.882436e-55 | -8.615850e-47 |
| Msa0220290 | Msa0468800 | -0.805588 | 1.241773e-49 | -8.615850e-47 |
| Msa0220290 | Msa0469160 | -0.817176 | 3.776628e-52 | -8.615850e-47 |
| Msa0220290 | Msa0484780 | -0.818594 | 1.806385e-52 | -8.615850e-47 |
| Msa0220290 | Msa0490730 | 0.817846 | 2.668040e-52 | -8.615850e-47 |
| Msa0220290 | Msa0498060 | -0.811381 | 7.203438e-51 | -8.615850e-47 |
| Msa0220290 | Msa0507680 | -0.827327 | 1.663124e-54 | -8.615850e-47 |
| Msa0220290 | Msa0509610 | -0.807569 | 4.741603e-50 | -8.615850e-47 |
| Msa0220290 | Msa0516370 | -0.816965 | 4.213074e-52 | -8.615850e-47 |
| Msa0220290 | Msa0546680 | -0.803790 | 2.947108e-49 | -8.615850e-47 |
| Msa0220290 | Msa0566030 | -0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa0220290 | Msa0567020 | -0.801803 | 7.578221e-49 | -8.615850e-47 |
| Msa0220290 | Msa0572420 | -0.822912 | 1.838038e-53 | -8.615850e-47 |
| Msa0220290 | Msa0572480 | -0.833320 | 5.707788e-56 | -8.615850e-47 |
| Msa0220290 | Msa0574890 | -0.838255 | 3.205420e-57 | -8.615850e-47 |
| Msa0220290 | Msa0626280 | -0.811910 | 5.526598e-51 | -8.615850e-47 |
| Msa0220290 | Msa0639430 | -0.807495 | 4.915197e-50 | -8.615850e-47 |
| Msa0220290 | Msa0648520 | -0.841994 | 3.390543e-58 | -8.615850e-47 |
| Msa0220290 | Msa0657970 | -0.814978 | 1.169485e-51 | -8.615850e-47 |
| Msa0220290 | Msa0658570 | -0.806084 | 9.767127e-50 | -8.615850e-47 |
| Msa0220290 | Msa0659510 | -0.820207 | 7.746617e-53 | -8.615850e-47 |
| Msa0220290 | Msa0662570 | -0.815444 | 9.218341e-52 | -8.615850e-47 |
| Msa0220290 | Msa0667050 | -0.800431 | 1.445614e-48 | -8.615850e-47 |
| Msa0220290 | Msa0677410 | -0.806498 | 7.988459e-50 | -8.615850e-47 |
| Msa0220290 | Msa0682330 | -0.825863 | 3.716897e-54 | -8.615850e-47 |
| Msa0220290 | Msa0691050 | -0.854972 | 8.617856e-62 | -8.615850e-47 |
| Msa0220290 | Msa0693380 | -0.822853 | 1.896187e-53 | -8.615850e-47 |
| Msa0220290 | Msa0703490 | -0.805710 | 1.170572e-49 | -8.615850e-47 |
| Msa0220290 | Msa0723990 | -0.828480 | 8.784579e-55 | -8.615850e-47 |
| Msa0220290 | Msa0727710 | -0.828136 | 1.062885e-54 | -8.615850e-47 |
| Msa0220290 | Msa0736960 | -0.803579 | 3.259249e-49 | -8.615850e-47 |
| Msa0220290 | Msa0737570 | -0.835113 | 2.026812e-56 | -8.615850e-47 |
| Msa0220290 | Msa0756630 | 0.824836 | 6.504358e-54 | -8.615850e-47 |
| Msa0220290 | Msa0764130 | 0.814709 | 1.342102e-51 | -8.615850e-47 |
| Msa0220290 | Msa0764570 | -0.812524 | 4.060899e-51 | -8.615850e-47 |
| Msa0220290 | Msa0800770 | -0.811015 | 8.648855e-51 | -8.615850e-47 |
| Msa0220290 | Msa0802090 | 0.801585 | 8.399865e-49 | -8.615850e-47 |
| Msa0220290 | Msa0816710 | -0.810999 | 8.715640e-51 | -8.615850e-47 |
| Msa0220290 | Msa0828560 | -0.817942 | 2.538455e-52 | -8.615850e-47 |
| Msa0220290 | Msa0829620 | -0.807663 | 4.528434e-50 | -8.615850e-47 |
| Msa0220290 | Msa0838930 | -0.812032 | 5.199587e-51 | -8.615850e-47 |
| Msa0220290 | Msa0843780 | 0.846507 | 2.079222e-59 | -8.615850e-47 |
| Msa0220290 | Msa0844240 | -0.813223 | 2.853951e-51 | -8.615850e-47 |
| Msa0220290 | Msa0856920 | -0.821682 | 3.545458e-53 | -8.615850e-47 |
| Msa0220290 | Msa0858840 | -0.804446 | 2.152260e-49 | -8.615850e-47 |
| Msa0220290 | Msa0861510 | -0.847645 | 1.014540e-59 | -8.615850e-47 |
| Msa0220290 | Msa0861530 | -0.849010 | 4.253213e-60 | -8.615850e-47 |
| Msa0220290 | Msa0861600 | -0.853050 | 3.086273e-61 | -8.615850e-47 |
| Msa0220290 | Msa0863930 | -0.824307 | 8.664874e-54 | -8.615850e-47 |
| Msa0220290 | Msa0866520 | -0.843894 | 1.058280e-58 | -8.615850e-47 |
| Msa0220290 | Msa0867890 | -0.819823 | 9.486312e-53 | -8.615850e-47 |
| Msa0220290 | Msa0870530 | -0.822122 | 2.804879e-53 | -8.615850e-47 |
| Msa0220290 | Msa0870550 | -0.828714 | 7.709367e-55 | -8.615850e-47 |
| Msa0220290 | Msa0880140 | -0.829847 | 4.093624e-55 | -8.615850e-47 |
| Msa0220290 | Msa0903690 | -0.818653 | 1.751926e-52 | -8.615850e-47 |
| Msa0220290 | Msa0903700 | -0.818298 | 2.108301e-52 | -8.615850e-47 |
| Msa0220290 | Msa0923010 | -0.803986 | 2.682875e-49 | -8.615850e-47 |
| Msa0220290 | Msa0926890 | -0.826697 | 2.353568e-54 | -8.615850e-47 |
| Msa0220290 | Msa0930780 | -0.826898 | 2.107206e-54 | -8.615850e-47 |
| Msa0220290 | Msa0936220 | -0.800820 | 1.204315e-48 | -8.615850e-47 |
| Msa0220290 | Msa0951450 | -0.801896 | 7.251897e-49 | -8.615850e-47 |
| Msa0220290 | Msa0973150 | -0.801250 | 9.837719e-49 | -8.615850e-47 |
| Msa0220290 | Msa0973160 | -0.829275 | 5.637394e-55 | -8.615850e-47 |
| Msa0220290 | Msa0977180 | 0.808126 | 3.610461e-50 | -8.615850e-47 |
| Msa0220290 | Msa1007270 | -0.806018 | 1.008370e-49 | -8.615850e-47 |
| Msa0220290 | Msa1019000 | -0.810241 | 1.270923e-50 | -8.615850e-47 |
| Msa0220290 | Msa1024740 | -0.808004 | 3.831119e-50 | -8.615850e-47 |
| Msa0220290 | Msa1031930 | -0.813820 | 2.109634e-51 | -8.615850e-47 |
| Msa0220290 | Msa1035300 | -0.820249 | 7.579063e-53 | -8.615850e-47 |
| Msa0220290 | Msa1035310 | -0.802423 | 5.650901e-49 | -8.615850e-47 |
| Msa0220290 | Msa1045200 | -0.812007 | 5.265731e-51 | -8.615850e-47 |
| Msa0220290 | Msa1048920 | -0.809749 | 1.622708e-50 | -8.615850e-47 |
| Msa0220290 | Msa1075220 | 0.809976 | 1.450046e-50 | -8.615850e-47 |
| Msa0220290 | Msa1080160 | -0.818205 | 2.213400e-52 | -8.615850e-47 |
| Msa0220290 | Msa1082370 | -0.800881 | 1.170427e-48 | -8.615850e-47 |
| Msa0220290 | Msa1082500 | -0.817137 | 3.854151e-52 | -8.615850e-47 |
| Msa0220290 | Msa1085200 | -0.832630 | 8.473928e-56 | -8.615850e-47 |
| Msa0220290 | Msa1102770 | -0.803199 | 3.907494e-49 | -8.615850e-47 |
| Msa0220290 | Msa1122520 | -0.802462 | 5.546488e-49 | -8.615850e-47 |
| Msa0220290 | Msa1127270 | -0.827371 | 1.623152e-54 | -8.615850e-47 |
| Msa0220290 | Msa1133220 | -0.800056 | 1.723554e-48 | -8.615850e-47 |
| Msa0220290 | Msa1139890 | -0.833568 | 4.949726e-56 | -8.615850e-47 |
| Msa0220290 | Msa1162550 | 0.805059 | 1.602758e-49 | -8.615850e-47 |
| Msa0220290 | Msa1186950 | 0.808724 | 2.691105e-50 | -8.615850e-47 |
| Msa0220290 | Msa1217900 | 0.836511 | 8.964903e-57 | -8.615850e-47 |
| Msa0220290 | Msa1229600 | -0.802473 | 5.517508e-49 | -8.615850e-47 |
| Msa0220290 | Msa1238930 | -0.812775 | 3.576854e-51 | -8.615850e-47 |
| Msa0220290 | Msa1276660 | -0.800993 | 1.110312e-48 | -8.615850e-47 |
| Msa0220290 | Msa1278840 | -0.811673 | 6.222891e-51 | -8.615850e-47 |
| Msa0220290 | Msa1283840 | -0.812454 | 4.204578e-51 | -8.615850e-47 |
| Msa0220290 | Msa1283860 | -0.808997 | 2.352435e-50 | -8.615850e-47 |
| Msa0220290 | Msa1284260 | -0.812736 | 3.647867e-51 | -8.615850e-47 |
| Msa0220290 | Msa1303250 | -0.813445 | 2.550237e-51 | -8.615850e-47 |
| Msa0220290 | Msa1307210 | -0.830544 | 2.766584e-55 | -8.615850e-47 |
| Msa0220290 | Msa1308380 | -0.817675 | 2.915463e-52 | -8.615850e-47 |
| Msa0220290 | Msa1313150 | -0.805285 | 1.437116e-49 | -8.615850e-47 |
| Msa0220290 | Msa1318240 | -0.816121 | 6.512012e-52 | -8.615850e-47 |
| Msa0220290 | Msa1319650 | -0.806317 | 8.724771e-50 | -8.615850e-47 |
| Msa0220290 | Msa1320410 | -0.809430 | 1.899265e-50 | -8.615850e-47 |
| Msa0220290 | Msa1322860 | -0.801184 | 1.014723e-48 | -8.615850e-47 |
| Msa0220290 | Msa1322890 | -0.800470 | 1.419800e-48 | -8.615850e-47 |
| Msa0220290 | Msa1323670 | -0.813097 | 3.041070e-51 | -8.615850e-47 |
| Msa0220290 | Msa1327050 | -0.814266 | 1.681983e-51 | -8.615850e-47 |
| Msa0220290 | Msa1340650 | -0.801978 | 6.976021e-49 | -8.615850e-47 |
| Msa0220290 | Msa1376890 | -0.804484 | 2.112559e-49 | -8.615850e-47 |
| Msa0220290 | Msa1378760 | -0.800441 | 1.439026e-48 | -8.615850e-47 |
| Msa0220290 | Msa1379850 | -0.828951 | 6.758023e-55 | -8.615850e-47 |
| Msa0220290 | Msa1393410 | -0.803534 | 3.330592e-49 | -8.615850e-47 |
| Msa0220290 | Msa1398890 | -0.806741 | 7.099190e-50 | -8.615850e-47 |
| Msa0220290 | Msa1404540 | -0.805886 | 1.074866e-49 | -8.615850e-47 |
| Msa0220290 | Msa1408620 | 0.853480 | 2.324437e-61 | -8.615850e-47 |
| Msa0220290 | Msa1409870 | -0.839337 | 1.683399e-57 | -8.615850e-47 |
| Msa0220290 | Msa1410210 | -0.817055 | 4.021143e-52 | -8.615850e-47 |
| Msa0220290 | Msa1423880 | -0.817711 | 2.861584e-52 | -8.615850e-47 |
| Msa0220290 | Msa1431060 | -0.803588 | 3.245563e-49 | -8.615850e-47 |
| Msa0220290 | Msa1435420 | -0.801958 | 7.044114e-49 | -8.615850e-47 |
| Msa0220290 | Msa1440740 | -0.805517 | 1.284809e-49 | -8.615850e-47 |
| Msa0220290 | Msa1445610 | 0.816039 | 6.792036e-52 | -8.615850e-47 |
| Msa0220290 | Msa1452120 | -0.807265 | 5.500835e-50 | -8.615850e-47 |
| Msa0220290 | Msa1459180 | -0.822037 | 2.934468e-53 | -8.615850e-47 |
| Msa0220290 | Msa1460020 | -0.810622 | 1.051971e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220290 | MtrunA17_Chr2g0323811 | 96.000 | 250 | 10 | 0 | 214 | 463 | 23 | 272 | 3.02e-170 | 479 |
| Msa0220290 | MtrunA17_Chr2g0323811 | 76.256 | 219 | 37 | 3 | 4 | 216 | 31 | 240 | 3.41e-107 | 319 |
| Msa0220290 | MtrunA17_Chr5g0407481 | 93.750 | 144 | 9 | 0 | 320 | 463 | 1 | 144 | 2.15e-93 | 278 |
| Msa0220290 | MtrunA17_Chr5g0407481 | 73.214 | 112 | 24 | 1 | 111 | 216 | 1 | 112 | 1.17e-49 | 166 |
| Msa0220290 | MtrunA17_Chr2g0323801 | 81.250 | 144 | 21 | 1 | 320 | 463 | 1 | 138 | 2.02e-75 | 232 |
| Msa0220290 | MtrunA17_Chr2g0323801 | 87.736 | 106 | 13 | 0 | 111 | 216 | 1 | 106 | 6.60e-58 | 187 |
| Msa0220290 | MtrunA17_Chr4g0004251 | 34.043 | 188 | 107 | 3 | 268 | 451 | 77 | 251 | 9.79e-35 | 130 |
| Msa0220290 | MtrunA17_Chr4g0004251 | 35.211 | 142 | 85 | 2 | 82 | 216 | 90 | 231 | 2.90e-22 | 95.9 |
| Msa0220290 | MtrunA17_Chr5g0407491 | 67.692 | 65 | 14 | 1 | 217 | 274 | 20 | 84 | 1.97e-19 | 82.8 |
| Msa0220290 | MtrunA17_Chr5g0407491 | 64.516 | 62 | 20 | 2 | 4 | 65 | 25 | 84 | 3.26e-14 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0220290 | AT4G03320.1 | 46.025 | 239 | 119 | 4 | 226 | 462 | 52 | 282 | 6.25e-72 | 229 |
| Msa0220290 | AT4G03320.1 | 43.662 | 213 | 103 | 6 | 16 | 216 | 44 | 251 | 3.91e-50 | 172 |
| Msa0220290 | AT1G04940.1 | 43.030 | 165 | 87 | 2 | 291 | 451 | 109 | 270 | 1.10e-44 | 157 |
| Msa0220290 | AT1G04940.1 | 37.427 | 171 | 100 | 2 | 53 | 216 | 80 | 250 | 9.03e-31 | 120 |
| Msa0220290 | AT1G04945.3 | 44.371 | 151 | 77 | 2 | 291 | 437 | 109 | 256 | 2.65e-37 | 145 |
| Msa0220290 | AT1G04945.3 | 37.427 | 171 | 100 | 2 | 53 | 216 | 80 | 250 | 9.28e-29 | 120 |
Find 130 sgRNAs with CRISPR-Local
Find 394 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTCAAGCTTCTAAATTT+TGG | 0.115139 | 2_1:-68495772 | None:intergenic |
| CCCTATATTATACTGCTATT+TGG | 0.188855 | 2_1:+68495262 | Msa0220290:CDS |
| GAACACTTGGGATGTATTAT+TGG | 0.195680 | 2_1:+68495420 | Msa0220290:CDS |
| TTCTATTATATAAAGTTATA+AGG | 0.207087 | 2_1:+68495683 | Msa0220290:three_prime_UTR |
| TTTGGTATGACAAAATTTAT+AGG | 0.251802 | 2_1:-68495823 | None:intergenic |
| TCTATCAGATGTGCTCTTCT+TGG | 0.261813 | 2_1:+68495482 | Msa0220290:CDS |
| CTCTTGACTACTTCCTAAAA+TGG | 0.273468 | 2_1:-68495581 | None:intergenic |
| TCTGGCTTCTCAGCATTTGC+AGG | 0.292403 | 2_1:-68490583 | None:intergenic |
| AAACTGCTTTCCAGATAGTA+TGG | 0.293058 | 2_1:+68490842 | Msa0220290:CDS |
| CTTCATTCCCTACTTAATAT+AGG | 0.308831 | 2_1:+68495545 | Msa0220290:CDS |
| AAAGCTGATTCGCTAATAAC+AGG | 0.313142 | 2_1:-68495521 | None:intergenic |
| GGCAATCGGTTGACAGCTCC+TGG | 0.313670 | 2_1:-68495230 | None:intergenic |
| GGGATATTGAAATTCTGATA+TGG | 0.316615 | 2_1:+68495704 | Msa0220290:three_prime_UTR |
| GCCAAATAGCAGTATAATAT+AGG | 0.316868 | 2_1:-68495263 | None:intergenic |
| GAACACTTGGGATGTATTAC+TGG | 0.323671 | 2_1:+68490902 | Msa0220290:CDS |
| AAAGTTCTCCACCACCATTC+TGG | 0.325031 | 2_1:-68490601 | None:intergenic |
| AAAGTTCTCCACCACCATTC+TGG | 0.325031 | 2_1:-68495101 | None:intergenic |
| CGATGGTATAAGTATGCTTC+TGG | 0.325201 | 2_1:-68490544 | None:intergenic |
| TACATGGAATCTGAAGATAA+TGG | 0.338807 | 2_1:-68495318 | None:intergenic |
| GAGTACTGGAACTGCTTCTT+CGG | 0.343644 | 2_1:-68495019 | None:intergenic |
| GGATTTGAGCAGTAAGAATA+TGG | 0.350629 | 2_1:-68495871 | None:intergenic |
| CATCTGCAATGCTATTAGAT+AGG | 0.350835 | 2_1:-68490635 | None:intergenic |
| CATCTGCAATGCTATTAGAT+AGG | 0.350835 | 2_1:-68495135 | None:intergenic |
| ACATGGAATCTGAAGATAAT+GGG | 0.352918 | 2_1:-68495317 | None:intergenic |
| TCTGGCTTCTCAGAATTTGC+AGG | 0.362075 | 2_1:-68495083 | None:intergenic |
| TGCTCGCAACCCATACTATC+TGG | 0.368055 | 2_1:-68490852 | None:intergenic |
| AACACTTGGGATGTATTATT+GGG | 0.376072 | 2_1:+68495421 | Msa0220290:CDS |
| TCTATTATATAAAGTTATAA+GGG | 0.379118 | 2_1:+68495684 | Msa0220290:three_prime_UTR |
| AGCTCTAGCAGGCAGTTCTC+TGG | 0.391828 | 2_1:+68494575 | Msa0220290:CDS |
| CCAAATAGCAGTATAATATA+GGG | 0.392964 | 2_1:-68495262 | None:intergenic |
| CGAAGACGCGTTTCATTCAA+TGG | 0.393075 | 2_1:+68490060 | Msa0220290:CDS |
| CTTCAGATTCCATGTAATGA+TGG | 0.402408 | 2_1:+68495325 | Msa0220290:CDS |
| TACATGGAATCTCAAGATAA+GGG | 0.403181 | 2_1:-68490800 | None:intergenic |
| AAATTGCTCTGCAGATTGTA+TGG | 0.403836 | 2_1:+68495360 | Msa0220290:CDS |
| CAGTTTGGCTATCGAGTTAG+TGG | 0.430982 | 2_1:+68490759 | Msa0220290:CDS |
| ATACTGCTATTTGGCTATCA+TGG | 0.434050 | 2_1:+68495271 | Msa0220290:CDS |
| CTTGAGATTCCATGTAATGA+TGG | 0.437833 | 2_1:+68490807 | Msa0220290:CDS |
| GGCAATTGGTTGATAGATGT+TGG | 0.446896 | 2_1:-68490712 | None:intergenic |
| CTGTCAACCGATTGCCAACC+TGG | 0.447918 | 2_1:+68495237 | Msa0220290:CDS |
| ATATGCTAGTGGACGAGTAC+TGG | 0.452962 | 2_1:-68495033 | None:intergenic |
| AAGGGAACCAGGTCGGCAAT+TGG | 0.458864 | 2_1:-68490726 | None:intergenic |
| TGTAATGATGGGAATGCTAC+TGG | 0.470169 | 2_1:+68490819 | Msa0220290:CDS |
| TGTAATGATGGGAATGCTAC+TGG | 0.470169 | 2_1:+68495337 | Msa0220290:CDS |
| CTGGCTTCTCAGCATTTGCA+GGG | 0.476966 | 2_1:-68490582 | None:intergenic |
| CATTCCCTACTTAATATAGG+AGG | 0.477614 | 2_1:+68495548 | Msa0220290:CDS |
| CATGCCACTGATACACTTCA+AGG | 0.480381 | 2_1:+68495397 | Msa0220290:CDS |
| CTATCAACCAATTGCCGACC+TGG | 0.481020 | 2_1:+68490719 | Msa0220290:CDS |
| GCAATTGGTTGATAGATGTT+GGG | 0.481489 | 2_1:-68490711 | None:intergenic |
| GCATATATATACCATTGGTC+TGG | 0.482252 | 2_1:+68495050 | Msa0220290:CDS |
| GCATATTTGTAAACTATATG+TGG | 0.483654 | 2_1:+68495603 | Msa0220290:three_prime_UTR |
| TTACATGGAATCTCAAGATA+AGG | 0.485734 | 2_1:-68490801 | None:intergenic |
| CTATATTAAGTAGGGAATGA+AGG | 0.486900 | 2_1:-68495544 | None:intergenic |
| ATACACGTCAAGGGAACACT+TGG | 0.501658 | 2_1:+68490889 | Msa0220290:CDS |
| ATACACTTCAAGGGAACACT+TGG | 0.502149 | 2_1:+68495407 | Msa0220290:CDS |
| GGAACCCTCCTATATTAAGT+AGG | 0.502372 | 2_1:-68495553 | None:intergenic |
| AGTACTGGAACTGCTTCTTC+GGG | 0.505982 | 2_1:-68495018 | None:intergenic |
| TCATAATCATGCATTCCATC+AGG | 0.507104 | 2_1:+68490950 | Msa0220290:CDS |
| CTGGCTTCTCAGAATTTGCA+GGG | 0.511599 | 2_1:-68495082 | None:intergenic |
| GAACTGCTTCTTCGGGAGGT+TGG | 0.512558 | 2_1:-68495011 | None:intergenic |
| ATCTGCAATGCTATTAGATA+GGG | 0.515006 | 2_1:-68490634 | None:intergenic |
| ATCTGCAATGCTATTAGATA+GGG | 0.515006 | 2_1:-68495134 | None:intergenic |
| CATTGCAGATGTCTGCAGTT+GGG | 0.518440 | 2_1:+68490647 | Msa0220290:CDS |
| CTTGCCATCACAGCTCTAGC+AGG | 0.524591 | 2_1:+68490096 | Msa0220290:CDS |
| CTTGCCATCACAGCTCTAGC+AGG | 0.524591 | 2_1:+68494564 | Msa0220290:CDS |
| GCATACTTATACCATCGGTC+TGG | 0.525286 | 2_1:+68490550 | Msa0220290:CDS |
| GCATTGCAGATGTCTGCTGC+TGG | 0.526281 | 2_1:+68495146 | Msa0220290:CDS |
| CTTGGGATGTATTACTGGGC+TGG | 0.526881 | 2_1:+68490907 | Msa0220290:CDS |
| GCTCTAGCAGGCAGTTCTCT+GGG | 0.531889 | 2_1:+68494576 | Msa0220290:CDS |
| CAAATTCTGAGAAGCCAGAA+TGG | 0.534347 | 2_1:+68495087 | Msa0220290:CDS |
| CACTAGCATATATATACCAT+TGG | 0.536170 | 2_1:+68495045 | Msa0220290:CDS |
| CTACTTCCTAAAATGGCCGT+TGG | 0.536876 | 2_1:-68495574 | None:intergenic |
| CTTGGGATGTATTATTGGGC+TGG | 0.536917 | 2_1:+68495425 | Msa0220290:CDS |
| TTATTGGGCTGGTGTGGCGT+TGG | 0.539601 | 2_1:+68495436 | Msa0220290:CDS |
| CCATGGTTATCAGTAAAGAA+TGG | 0.544332 | 2_1:-68490466 | None:intergenic |
| TTACTGGGCTGGTGTGGCGT+TGG | 0.546573 | 2_1:+68490918 | Msa0220290:CDS |
| GAAGACGCGTTTCATTCAAT+GGG | 0.549296 | 2_1:+68490061 | Msa0220290:CDS |
| ATTCCCTACTTAATATAGGA+GGG | 0.550198 | 2_1:+68495549 | Msa0220290:CDS |
| TTCAGATTCCATGTAATGAT+GGG | 0.550501 | 2_1:+68495326 | Msa0220290:CDS |
| CTATTTGGCTATCATGGTAG+TGG | 0.557828 | 2_1:+68495277 | Msa0220290:CDS |
| TAGGGAACCAGGTTGGCAAT+CGG | 0.558555 | 2_1:-68495244 | None:intergenic |
| GCATTGCAGATGTCTGCAGT+TGG | 0.559605 | 2_1:+68490646 | Msa0220290:CDS |
| TTGAGATTCCATGTAATGAT+GGG | 0.561663 | 2_1:+68490808 | Msa0220290:CDS |
| AGAACTGTGTCTTCGAGACA+TGG | 0.566060 | 2_1:-68490512 | None:intergenic |
| GAACCCTCCTATATTAAGTA+GGG | 0.566246 | 2_1:-68495552 | None:intergenic |
| CTGAGAAGCCAGAATGGTGG+TGG | 0.567799 | 2_1:+68495093 | Msa0220290:CDS |
| AACTGCTTTCCAGATAGTAT+GGG | 0.577068 | 2_1:+68490843 | Msa0220290:CDS |
| AATTTGAATTTATCAAGCAA+AGG | 0.581284 | 2_1:-68495182 | None:intergenic |
| CATTGCAGATGTCTGCTGCT+GGG | 0.582116 | 2_1:+68495147 | Msa0220290:CDS |
| GTAGCATTCCCATCATTACA+TGG | 0.585539 | 2_1:-68490816 | None:intergenic |
| GTAGCATTCCCATCATTACA+TGG | 0.585539 | 2_1:-68495334 | None:intergenic |
| ACTGCCTGCTAGAGCTGTGA+TGG | 0.586949 | 2_1:-68490100 | None:intergenic |
| CTGAGAAGCCAGAATGGTGG+TGG | 0.588001 | 2_1:+68490593 | Msa0220290:CDS |
| ACTGCCTGCTAGAGCTGTGA+TGG | 0.588886 | 2_1:-68494568 | None:intergenic |
| CAAATGCTGAGAAGCCAGAA+TGG | 0.589260 | 2_1:+68490587 | Msa0220290:CDS |
| ACATGGAATCTCAAGATAAG+GGG | 0.590190 | 2_1:-68490799 | None:intergenic |
| ACTGGAACTGCTTCTTCGGG+AGG | 0.591670 | 2_1:-68495015 | None:intergenic |
| TTAATATAGGAGGGTTCCAA+CGG | 0.593163 | 2_1:+68495558 | Msa0220290:CDS |
| GCAGTATAATATAGGGAACC+AGG | 0.596497 | 2_1:-68495255 | None:intergenic |
| ATGCCACTGATACACTTCAA+GGG | 0.597572 | 2_1:+68495398 | Msa0220290:CDS |
| CAGAAGCATACTTATACCAT+CGG | 0.601782 | 2_1:+68490545 | Msa0220290:CDS |
| GATGTATTATTGGGCTGGTG+TGG | 0.606994 | 2_1:+68495430 | Msa0220290:CDS |
| AATTGCTCTGCAGATTGTAT+GGG | 0.609591 | 2_1:+68495361 | Msa0220290:CDS |
| CAATGGTATATATATGCTAG+TGG | 0.609835 | 2_1:-68495044 | None:intergenic |
| AGGTTGGAGCACTGAGTGAG+AGG | 0.611111 | 2_1:-68494995 | None:intergenic |
| GCAATCGGTTGACAGCTCCT+GGG | 0.611407 | 2_1:-68495229 | None:intergenic |
| GATGAAACAGCTGTGAGTCG+TGG | 0.611706 | 2_1:-68490442 | None:intergenic |
| AACACTTGGGATGTATTACT+GGG | 0.612813 | 2_1:+68490903 | Msa0220290:CDS |
| CATGGAATCTGAAGATAATG+GGG | 0.614103 | 2_1:-68495316 | None:intergenic |
| CACTGAGTGAGAGGTGACCA+TGG | 0.617796 | 2_1:-68494986 | None:intergenic |
| GAACTGTGTCTTCGAGACAT+GGG | 0.621206 | 2_1:-68490511 | None:intergenic |
| GGAGATGAAACAGCTATGAT+CGG | 0.621667 | 2_1:-68490421 | None:intergenic |
| TGGGAACACTACTGAGTGAG+AGG | 0.626323 | 2_1:-68490492 | None:intergenic |
| GATGTATTACTGGGCTGGTG+TGG | 0.626763 | 2_1:+68490912 | Msa0220290:CDS |
| CATGGAATCTCAAGATAAGG+GGG | 0.633705 | 2_1:-68490798 | None:intergenic |
| GTTCCCTTGACGTGTATCAG+TGG | 0.633876 | 2_1:-68490883 | None:intergenic |
| TATAATATAGGGAACCAGGT+TGG | 0.639459 | 2_1:-68495251 | None:intergenic |
| ATGCCACTGATACACGTCAA+GGG | 0.641175 | 2_1:+68490880 | Msa0220290:CDS |
| AAGCTGATTCGCTAATAACA+GGG | 0.643323 | 2_1:-68495520 | None:intergenic |
| CATGCCACTGATACACGTCA+AGG | 0.647386 | 2_1:+68490879 | Msa0220290:CDS |
| CCATTCTTTACTGATAACCA+TGG | 0.650765 | 2_1:+68490466 | Msa0220290:CDS |
| GGATTCGAAAACCAGACCAA+TGG | 0.654200 | 2_1:-68495061 | None:intergenic |
| GTTCCCTTGAAGTGTATCAG+TGG | 0.656964 | 2_1:-68495401 | None:intergenic |
| TACACTTCAAGGGAACACTT+GGG | 0.657791 | 2_1:+68495408 | Msa0220290:CDS |
| CCATGGTTATCAGTAAACAA+TGG | 0.660073 | 2_1:-68494969 | None:intergenic |
| CCATTGTTTACTGATAACCA+TGG | 0.663411 | 2_1:+68494969 | Msa0220290:CDS |
| GGATTCGAAAACCAGACCGA+TGG | 0.667594 | 2_1:-68490561 | None:intergenic |
| TACTGAGTGAGAGGTTACCA+TGG | 0.673633 | 2_1:-68490483 | None:intergenic |
| ATTCTGAGAAGCCAGAATGG+TGG | 0.680045 | 2_1:+68495090 | Msa0220290:CDS |
| TACACGTCAAGGGAACACTT+GGG | 0.682765 | 2_1:+68490890 | Msa0220290:CDS |
| ATGCTGAGAAGCCAGAATGG+TGG | 0.726668 | 2_1:+68490590 | Msa0220290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATAAAAATAAAAAT+GGG | - | chr2_1:68494909-68494928 | None:intergenic | 0.0% |
| !! | AATAAAAATAAAAATAAAAA+TGG | - | chr2_1:68494910-68494929 | None:intergenic | 0.0% |
| !! | TTCAATTATATAGATATATA+AGG | + | chr2_1:68491227-68491246 | Msa0220290:intron | 10.0% |
| !! | TCAATTATATAGATATATAA+GGG | + | chr2_1:68491228-68491247 | Msa0220290:intron | 10.0% |
| !!! | TAATTTGAACATTTTTTTTT+TGG | + | chr2_1:68492524-68492543 | Msa0220290:intron | 10.0% |
| !!! | ATATTATAAAAAAAGTTTTG+AGG | + | chr2_1:68492823-68492842 | Msa0220290:intron | 10.0% |
| !!! | TATTATAAAAAAAGTTTTGA+GGG | + | chr2_1:68492824-68492843 | Msa0220290:intron | 10.0% |
| !! | AGAATAATAATAATAAAAAG+AGG | + | chr2_1:68493607-68493626 | Msa0220290:intron | 10.0% |
| !! | TTCAAATGAAAATATAAAAA+AGG | - | chr2_1:68493886-68493905 | None:intergenic | 10.0% |
| !!! | TTCATTTTAATTTGAAATTA+AGG | + | chr2_1:68494015-68494034 | Msa0220290:intron | 10.0% |
| !! | TTCTATTATATAAAGTTATA+AGG | + | chr2_1:68495683-68495702 | Msa0220290:three_prime_UTR | 10.0% |
| !! | TCTATTATATAAAGTTATAA+GGG | + | chr2_1:68495684-68495703 | Msa0220290:three_prime_UTR | 10.0% |
| !! | TAAATCCATTAAAAAATGTT+GGG | - | chr2_1:68490152-68490171 | None:intergenic | 15.0% |
| !! | ATAAATCCATTAAAAAATGT+TGG | - | chr2_1:68490153-68490172 | None:intergenic | 15.0% |
| !! | TGCAATAATAATAATGAAAT+AGG | + | chr2_1:68490224-68490243 | Msa0220290:intron | 15.0% |
| !! | AATAATAATAATGAAATAGG+AGG | + | chr2_1:68490227-68490246 | Msa0220290:intron | 15.0% |
| !!! | GAAAAATAGAAATAAGTTTT+GGG | - | chr2_1:68490377-68490396 | None:intergenic | 15.0% |
| !!! | AGAAAAATAGAAATAAGTTT+TGG | - | chr2_1:68490378-68490397 | None:intergenic | 15.0% |
| !!! | TTTCTATTTTTCTTTATTTC+AGG | + | chr2_1:68490385-68490404 | Msa0220290:intron | 15.0% |
| !! | TGATTAATTGAATAATTGTT+AGG | + | chr2_1:68491799-68491818 | Msa0220290:intron | 15.0% |
| !!! | TAGCTTTTTAAAATATTTTC+CGG | - | chr2_1:68492197-68492216 | None:intergenic | 15.0% |
| !!! | TTTTATTATTTGAATCAACA+TGG | + | chr2_1:68492731-68492750 | Msa0220290:intron | 15.0% |
| !!! | ATTATAAAAAAAGTTTTGAG+GGG | + | chr2_1:68492825-68492844 | Msa0220290:intron | 15.0% |
| !!! | ATTGGCATAATTTTAAAAAT+GGG | - | chr2_1:68493455-68493474 | None:intergenic | 15.0% |
| !!! | TCTTTTCTTTAGTTTTTTTT+AGG | - | chr2_1:68493561-68493580 | None:intergenic | 15.0% |
| !! | ATAATAATAATAAAAAGAGG+TGG | + | chr2_1:68493610-68493629 | Msa0220290:intron | 15.0% |
| !! | TAATAATAATAAAAAGAGGT+GGG | + | chr2_1:68493611-68493630 | Msa0220290:intron | 15.0% |
| !! | AAATGAAAATATAAAAAAGG+AGG | - | chr2_1:68493883-68493902 | None:intergenic | 15.0% |
| !!! | AATGTATTTGATTTTTGATT+AGG | + | chr2_1:68494487-68494506 | Msa0220290:intron | 15.0% |
| !! | TGCAATAATAATAATGAAAT+AGG | + | chr2_1:68490224-68490243 | Msa0220290:intron | 15.0% |
| !! | AATAATAATAATGAAATAGG+AGG | + | chr2_1:68490227-68490246 | Msa0220290:intron | 15.0% |
| !!! | TAAAAACTAGAAATAAGTTT+TGG | - | chr2_1:68494881-68494900 | None:intergenic | 15.0% |
| !!! | TATTTCCCAACATTTTTTAA+TGG | + | chr2_1:68490144-68490163 | Msa0220290:intron | 20.0% |
| !!! | AAGATCAAATTTTCATTCAA+AGG | - | chr2_1:68490685-68490704 | None:intergenic | 20.0% |
| !! | ATTCATTCCCTATTTAATAT+AGG | + | chr2_1:68491027-68491046 | Msa0220290:intron | 20.0% |
| !! | ATGTACATTCTTCTAAATTA+TGG | - | chr2_1:68491321-68491340 | None:intergenic | 20.0% |
| !!! | TAAGATTTTTTGGTTAGTTA+TGG | + | chr2_1:68491414-68491433 | Msa0220290:intron | 20.0% |
| !! | CGAACTACTATAAAAAATAT+CGG | + | chr2_1:68491731-68491750 | Msa0220290:intron | 20.0% |
| !! | AACTAAAATTAAAGAGGATA+GGG | - | chr2_1:68491771-68491790 | None:intergenic | 20.0% |
| !! | TAACTAAAATTAAAGAGGAT+AGG | - | chr2_1:68491772-68491791 | None:intergenic | 20.0% |
| !! | TGCAATAACTAAAATTAAAG+AGG | - | chr2_1:68491777-68491796 | None:intergenic | 20.0% |
| !!! | CATAGTAATTTTGTTCATAT+AGG | + | chr2_1:68491968-68491987 | Msa0220290:intron | 20.0% |
| !!! | TAATTTTGTTCATATAGGTT+TGG | + | chr2_1:68491973-68491992 | Msa0220290:intron | 20.0% |
| !! | TTAATTATAACTACCAAAGT+AGG | - | chr2_1:68492684-68492703 | None:intergenic | 20.0% |
| !!! | TAAATTAGTTGTCGTTTTTT+TGG | - | chr2_1:68492789-68492808 | None:intergenic | 20.0% |
| !!! | TTATAAAAAAAGTTTTGAGG+GGG | + | chr2_1:68492826-68492845 | Msa0220290:intron | 20.0% |
| !!! | ATATCTTTTCTGAATCTTAT+AGG | + | chr2_1:68493168-68493187 | Msa0220290:intron | 20.0% |
| !! | ATAATAAAGTCGATATAGTT+TGG | - | chr2_1:68493247-68493266 | None:intergenic | 20.0% |
| !!! | AACTATATCGACTTTATTAT+TGG | + | chr2_1:68493247-68493266 | Msa0220290:intron | 20.0% |
| !! | ATCTAACATGCTAAAAATTT+GGG | - | chr2_1:68493306-68493325 | None:intergenic | 20.0% |
| !!! | TAAATAATGAGCAATTTTGT+TGG | - | chr2_1:68493335-68493354 | None:intergenic | 20.0% |
| !!! | CATTGGCATAATTTTAAAAA+TGG | - | chr2_1:68493456-68493475 | None:intergenic | 20.0% |
| !!! | CATTTTTAAAATTATGCCAA+TGG | + | chr2_1:68493454-68493473 | Msa0220290:intron | 20.0% |
| !!! | TTTCTTTAGTTTTTTTTAGG+AGG | - | chr2_1:68493558-68493577 | None:intergenic | 20.0% |
| !!! | ATGTTGTTATTTTTCAATTC+TGG | + | chr2_1:68493941-68493960 | Msa0220290:intron | 20.0% |
| !! | AAAAATTAAAAGACAAACAG+AGG | - | chr2_1:68494452-68494471 | None:intergenic | 20.0% |
| !!! | AAAACAATTTTGGATTTAGA+TGG | - | chr2_1:68494828-68494847 | None:intergenic | 20.0% |
| !!! | ATGCAATTTGAAAACAATTT+TGG | - | chr2_1:68494838-68494857 | None:intergenic | 20.0% |
| !! | AATTTGAATTTATCAAGCAA+AGG | - | chr2_1:68495185-68495204 | None:intergenic | 20.0% |
| !! | TTTGGTATGACAAAATTTAT+AGG | - | chr2_1:68495826-68495845 | None:intergenic | 20.0% |
| !! | ATCTGTCAATTTTACTTGTT+TGG | + | chr2_1:68490171-68490190 | Msa0220290:intron | 25.0% |
| ! | GAAACTTGTATATTGATCAT+AGG | + | chr2_1:68490256-68490275 | Msa0220290:intron | 25.0% |
| ! | ATTCCCTATTTAATATAGGA+GGG | + | chr2_1:68491031-68491050 | Msa0220290:intron | 25.0% |
| ! | AGATTCATTGAATGAGTATA+TGG | + | chr2_1:68491147-68491166 | Msa0220290:intron | 25.0% |
| !!! | TTTGGTCTTACAAAATGTAT+AGG | - | chr2_1:68491365-68491384 | None:intergenic | 25.0% |
| ! | TAAGACCAAACAATCTAATA+AGG | + | chr2_1:68491375-68491394 | Msa0220290:intron | 25.0% |
| ! | TTGAACCTTATTAGATTGTT+TGG | - | chr2_1:68491383-68491402 | None:intergenic | 25.0% |
| !!! | GTTAGCTTTCTAAGATTTTT+TGG | + | chr2_1:68491404-68491423 | Msa0220290:intron | 25.0% |
| ! | GGAAAGAACATTAATTCATT+AGG | + | chr2_1:68491451-68491470 | Msa0220290:intron | 25.0% |
| !! | AACATTAATTCATTAGGTTG+AGG | + | chr2_1:68491457-68491476 | Msa0220290:intron | 25.0% |
| !! | AATCAACATTTGTTACTTAG+TGG | + | chr2_1:68491642-68491661 | Msa0220290:intron | 25.0% |
| !!! | ATTGTTTTGTACTTTGTTCA+AGG | + | chr2_1:68492009-68492028 | Msa0220290:intron | 25.0% |
| !!! | GTTTTAACGAAATTGACTAT+TGG | - | chr2_1:68492156-68492175 | None:intergenic | 25.0% |
| !!! | CTTGTTTTTTATCAAAACTC+CGG | + | chr2_1:68492175-68492194 | Msa0220290:intron | 25.0% |
| ! | GACAACTAATTTAACACAAA+GGG | + | chr2_1:68492796-68492815 | Msa0220290:intron | 25.0% |
| !!! | TATAAAAAAAGTTTTGAGGG+GGG | + | chr2_1:68492827-68492846 | Msa0220290:intron | 25.0% |
| ! | ATGTTGTTAGATACATTAAG+TGG | + | chr2_1:68492921-68492940 | Msa0220290:intron | 25.0% |
| !! | CTTTTCATTACCAAATTTAG+AGG | + | chr2_1:68493098-68493117 | Msa0220290:intron | 25.0% |
| ! | CTTTCACATAACTAAAACTT+CGG | - | chr2_1:68493127-68493146 | None:intergenic | 25.0% |
| ! | CATCTAACATGCTAAAAATT+TGG | - | chr2_1:68493307-68493326 | None:intergenic | 25.0% |
| ! | AGAGAAAGAAAAGGTAATTA+CGG | - | chr2_1:68493760-68493779 | None:intergenic | 25.0% |
| ! | AGTTGTAAAAGAGAAAGAAA+AGG | - | chr2_1:68493769-68493788 | None:intergenic | 25.0% |
| !! | TGGTTATTTCATAGACTAAA+GGG | - | chr2_1:68494094-68494113 | None:intergenic | 25.0% |
| ! | TTTCAGTAAGAACATAAACA+TGG | - | chr2_1:68494305-68494324 | None:intergenic | 25.0% |
| !! | TGTTCTTATTGTTGTTGTTA+TGG | + | chr2_1:68494395-68494414 | Msa0220290:intron | 25.0% |
| !!! | TATCTGTCAATTTTAATCGT+AGG | + | chr2_1:68494639-68494658 | Msa0220290:intron | 25.0% |
| ! | GAAACTTGTATATTGATCTT+AGG | + | chr2_1:68494738-68494757 | Msa0220290:intron | 25.0% |
| !! | AATTGTTTTCAAATTGCATG+TGG | + | chr2_1:68494839-68494858 | Msa0220290:intron | 25.0% |
| ! | CCAAATAGCAGTATAATATA+GGG | - | chr2_1:68495265-68495284 | None:intergenic | 25.0% |
| ! | GCATATTTGTAAACTATATG+TGG | + | chr2_1:68495603-68495622 | Msa0220290:three_prime_UTR | 25.0% |
| !! | TCATACCAAAAATTCTAGAA+TGG | + | chr2_1:68495836-68495855 | Msa0220290:three_prime_UTR | 25.0% |
| ACATTGCATAAATGTCTTCA+TGG | - | chr2_1:68490322-68490341 | None:intergenic | 30.0% | |
| CCAAAAATGTTGCATTTAGA+TGG | - | chr2_1:68490346-68490365 | None:intergenic | 30.0% | |
| ! | CCATCTAAATGCAACATTTT+TGG | + | chr2_1:68490343-68490362 | Msa0220290:intron | 30.0% |
| ATCTGCAATGCTATTAGATA+GGG | - | chr2_1:68490637-68490656 | None:intergenic | 30.0% | |
| CCAAACTGCTGTATAAAAAA+GGG | - | chr2_1:68490747-68490766 | None:intergenic | 30.0% | |
| TCGAGTTAGTGGTAAAAAAT+AGG | + | chr2_1:68490770-68490789 | Msa0220290:CDS | 30.0% | |
| CGAGTTAGTGGTAAAAAATA+GGG | + | chr2_1:68490771-68490790 | Msa0220290:CDS | 30.0% | |
| TACATGGAATCTCAAGATAA+GGG | - | chr2_1:68490803-68490822 | None:intergenic | 30.0% | |
| TTACATGGAATCTCAAGATA+AGG | - | chr2_1:68490804-68490823 | None:intergenic | 30.0% | |
| TTGAGATTCCATGTAATGAT+GGG | + | chr2_1:68490808-68490827 | Msa0220290:CDS | 30.0% | |
| CATTCCTGTTATTAGTGAAT+CGG | + | chr2_1:68490999-68491018 | Msa0220290:intron | 30.0% | |
| CATTCCCTATTTAATATAGG+AGG | + | chr2_1:68491030-68491049 | Msa0220290:intron | 30.0% | |
| GAACCCTCCTATATTAAATA+GGG | - | chr2_1:68491037-68491056 | None:intergenic | 30.0% | |
| TATGATAGATAATGACTGGA+AGG | - | chr2_1:68491109-68491128 | None:intergenic | 30.0% | |
| TGCTTATGATAGATAATGAC+TGG | - | chr2_1:68491113-68491132 | None:intergenic | 30.0% | |
| GGGATATTGAAATTCTGATA+CGG | + | chr2_1:68491248-68491267 | Msa0220290:intron | 30.0% | |
| ! | ATTTAGCATGGTGCTAAATA+GGG | - | chr2_1:68491513-68491532 | None:intergenic | 30.0% |
| ! | TATTTAGCATGGTGCTAAAT+AGG | - | chr2_1:68491514-68491533 | None:intergenic | 30.0% |
| TATTTAGCACCATGCTAAAT+AGG | + | chr2_1:68491513-68491532 | Msa0220290:intron | 30.0% | |
| ACTGTCTAATTCGTTGAATT+AGG | + | chr2_1:68491861-68491880 | Msa0220290:intron | 30.0% | |
| ! | AGGAAAACCCAAAATTTTCA+GGG | - | chr2_1:68492402-68492421 | None:intergenic | 30.0% |
| TCCTAAGTAGTTGTAGTTTA+TGG | - | chr2_1:68492431-68492450 | None:intergenic | 30.0% | |
| ! | TTTAAAACTCGTACTTCGTA+GGG | - | chr2_1:68492478-68492497 | None:intergenic | 30.0% |
| !!! | TTTTAAAACTCGTACTTCGT+AGG | - | chr2_1:68492479-68492498 | None:intergenic | 30.0% |
| GTTCACACTAAAAAATGGTT+CGG | - | chr2_1:68492570-68492589 | None:intergenic | 30.0% | |
| TCACTGTTCACACTAAAAAA+TGG | - | chr2_1:68492575-68492594 | None:intergenic | 30.0% | |
| TGAACATTAATTGGATCAGA+GGG | - | chr2_1:68492652-68492671 | None:intergenic | 30.0% | |
| CGACAACTAATTTAACACAA+AGG | + | chr2_1:68492795-68492814 | Msa0220290:intron | 30.0% | |
| TGCTAATATATGATGTTCAC+TGG | + | chr2_1:68492955-68492974 | Msa0220290:intron | 30.0% | |
| ! | TAAGCTTAATTTGATGCACT+AGG | + | chr2_1:68493001-68493020 | Msa0220290:intron | 30.0% |
| AACATTAATACCCTCTCTAT+TGG | - | chr2_1:68493028-68493047 | None:intergenic | 30.0% | |
| AGAATCATATGCTTCTAATG+TGG | + | chr2_1:68493191-68493210 | Msa0220290:intron | 30.0% | |
| GATATAGTTTGGAAGATTGT+TGG | - | chr2_1:68493236-68493255 | None:intergenic | 30.0% | |
| TACTCTTCATAGTTTATCGT+CGG | + | chr2_1:68493363-68493382 | Msa0220290:intron | 30.0% | |
| ATAATAAAAAGAGGTGGGTA+AGG | + | chr2_1:68493616-68493635 | Msa0220290:intron | 30.0% | |
| TAATAAAAAGAGGTGGGTAA+GGG | + | chr2_1:68493617-68493636 | Msa0220290:intron | 30.0% | |
| GAGAAAGAAAAGGTAATTAC+GGG | - | chr2_1:68493759-68493778 | None:intergenic | 30.0% | |
| !! | GTTTTATGGGAGGTTTTAAT+AGG | + | chr2_1:68494063-68494082 | Msa0220290:intron | 30.0% |
| ! | CTGGTTATTTCATAGACTAA+AGG | - | chr2_1:68494095-68494114 | None:intergenic | 30.0% |
| !!! | GGTTTTAGAGTTTACTCTTT+AGG | + | chr2_1:68494249-68494268 | Msa0220290:intron | 30.0% |
| ACATTGCATAAATGTCTTCA+TGG | - | chr2_1:68490322-68490341 | None:intergenic | 30.0% | |
| ! | TTCAAATTGCATGTGGTTTT+TGG | + | chr2_1:68494846-68494865 | Msa0220290:intron | 30.0% |
| ATCTGCAATGCTATTAGATA+GGG | - | chr2_1:68490637-68490656 | None:intergenic | 30.0% | |
| CCCTATATTATACTGCTATT+TGG | + | chr2_1:68495262-68495281 | Msa0220290:CDS | 30.0% | |
| GCCAAATAGCAGTATAATAT+AGG | - | chr2_1:68495266-68495285 | None:intergenic | 30.0% | |
| ACATGGAATCTGAAGATAAT+GGG | - | chr2_1:68495320-68495339 | None:intergenic | 30.0% | |
| TACATGGAATCTGAAGATAA+TGG | - | chr2_1:68495321-68495340 | None:intergenic | 30.0% | |
| TTCAGATTCCATGTAATGAT+GGG | + | chr2_1:68495326-68495345 | Msa0220290:CDS | 30.0% | |
| AACACTTGGGATGTATTATT+GGG | + | chr2_1:68495421-68495440 | Msa0220290:CDS | 30.0% | |
| CTATATTAAGTAGGGAATGA+AGG | - | chr2_1:68495547-68495566 | None:intergenic | 30.0% | |
| CTTCATTCCCTACTTAATAT+AGG | + | chr2_1:68495545-68495564 | Msa0220290:CDS | 30.0% | |
| ATTCCCTACTTAATATAGGA+GGG | + | chr2_1:68495549-68495568 | Msa0220290:CDS | 30.0% | |
| GGGATATTGAAATTCTGATA+TGG | + | chr2_1:68491248-68491267 | Msa0220290:intron | 30.0% | |
| ! | ATGCTCAAGCTTCTAAATTT+TGG | - | chr2_1:68495775-68495794 | None:intergenic | 30.0% |
| !!! | CTAAGCCATTCTAGAATTTT+TGG | - | chr2_1:68495844-68495863 | None:intergenic | 30.0% |
| CATGGCTTAGCAACAAATAA+AGG | - | chr2_1:68490304-68490323 | None:intergenic | 35.0% | |
| CCATGGTTATCAGTAAAGAA+TGG | - | chr2_1:68490469-68490488 | None:intergenic | 35.0% | |
| CCATTCTTTACTGATAACCA+TGG | + | chr2_1:68490466-68490485 | Msa0220290:CDS | 35.0% | |
| ! | CAGAAGCATACTTATACCAT+CGG | + | chr2_1:68490545-68490564 | Msa0220290:CDS | 35.0% |
| CATCTGCAATGCTATTAGAT+AGG | - | chr2_1:68490638-68490657 | None:intergenic | 35.0% | |
| !! | GCAATTGGTTGATAGATGTT+GGG | - | chr2_1:68490714-68490733 | None:intergenic | 35.0% |
| TATAAAAAAGGGAACCAGGT+CGG | - | chr2_1:68490736-68490755 | None:intergenic | 35.0% | |
| !!! | CCCTTTTTTATACAGCAGTT+TGG | + | chr2_1:68490744-68490763 | Msa0220290:CDS | 35.0% |
| GCCAAACTGCTGTATAAAAA+AGG | - | chr2_1:68490748-68490767 | None:intergenic | 35.0% | |
| ACATGGAATCTCAAGATAAG+GGG | - | chr2_1:68490802-68490821 | None:intergenic | 35.0% | |
| CTTGAGATTCCATGTAATGA+TGG | + | chr2_1:68490807-68490826 | Msa0220290:CDS | 35.0% | |
| AAACTGCTTTCCAGATAGTA+TGG | + | chr2_1:68490842-68490861 | Msa0220290:CDS | 35.0% | |
| AACTGCTTTCCAGATAGTAT+GGG | + | chr2_1:68490843-68490862 | Msa0220290:CDS | 35.0% | |
| AACACTTGGGATGTATTACT+GGG | + | chr2_1:68490903-68490922 | Msa0220290:CDS | 35.0% | |
| TCATAATCATGCATTCCATC+AGG | + | chr2_1:68490950-68490969 | Msa0220290:CDS | 35.0% | |
| GGAACCCTCCTATATTAAAT+AGG | - | chr2_1:68491038-68491057 | None:intergenic | 35.0% | |
| CTCTTGACTACTTCCTAAAA+CGG | - | chr2_1:68491069-68491088 | None:intergenic | 35.0% | |
| ! | ATGAGTATATGGTCTTGAAG+TGG | + | chr2_1:68491158-68491177 | Msa0220290:intron | 35.0% |
| CTTCTAAATTATGGCATGAC+AGG | - | chr2_1:68491312-68491331 | None:intergenic | 35.0% | |
| ! | GGTTAGTTATGGTCTTCAAT+TGG | + | chr2_1:68491425-68491444 | Msa0220290:intron | 35.0% |
| GTTATGGTCTTCAATTGGTT+AGG | + | chr2_1:68491430-68491449 | Msa0220290:intron | 35.0% | |
| GCATTTAGACCATCTACAAT+GGG | + | chr2_1:68491479-68491498 | Msa0220290:intron | 35.0% | |
| CATTTAGACCATCTACAATG+GGG | + | chr2_1:68491480-68491499 | Msa0220290:intron | 35.0% | |
| ! | TTTAGCATGGTGCTAAATAG+GGG | - | chr2_1:68491512-68491531 | None:intergenic | 35.0% |
| !! | ATCAAACATCGACTCAATCA+CGG | - | chr2_1:68492332-68492351 | None:intergenic | 35.0% |
| ! | ACTTCGAACCCTGAAAATTT+TGG | + | chr2_1:68492391-68492410 | Msa0220290:intron | 35.0% |
| ! | CTTCGAACCCTGAAAATTTT+GGG | + | chr2_1:68492392-68492411 | Msa0220290:intron | 35.0% |
| ! | GAGGAAAACCCAAAATTTTC+AGG | - | chr2_1:68492403-68492422 | None:intergenic | 35.0% |
| GTAGTTGTAGTTTATGGCAA+CGG | - | chr2_1:68492425-68492444 | None:intergenic | 35.0% | |
| GCCATAAACTACAACTACTT+AGG | + | chr2_1:68492427-68492446 | Msa0220290:intron | 35.0% | |
| GTGAACATTAATTGGATCAG+AGG | - | chr2_1:68492653-68492672 | None:intergenic | 35.0% | |
| TGTGTGGAGTGAACATTAAT+TGG | - | chr2_1:68492661-68492680 | None:intergenic | 35.0% | |
| !!! | TCGTTTTTTTGGATTGAGTG+TGG | - | chr2_1:68492778-68492797 | None:intergenic | 35.0% |
| TTATAGAAACCGCAAAAAGG+AGG | - | chr2_1:68492984-68493003 | None:intergenic | 35.0% | |
| AGCTTATAGAAACCGCAAAA+AGG | - | chr2_1:68492987-68493006 | None:intergenic | 35.0% | |
| !! | TAGAGAGGGTATTAATGTTG+TGG | + | chr2_1:68493029-68493048 | Msa0220290:intron | 35.0% |
| AAGAAGAAAGAAGACGATGA+TGG | + | chr2_1:68493666-68493685 | Msa0220290:intron | 35.0% | |
| ATATGTTGTCTCTGTTCGTT+AGG | + | chr2_1:68494041-68494060 | Msa0220290:intron | 35.0% | |
| ! | TCTCTGTTCGTTAGGTTTTA+TGG | + | chr2_1:68494049-68494068 | Msa0220290:intron | 35.0% |
| !! | CTCTGTTCGTTAGGTTTTAT+GGG | + | chr2_1:68494050-68494069 | Msa0220290:intron | 35.0% |
| TCTTTAGGTACTTTACCAGT+TGG | + | chr2_1:68494264-68494283 | Msa0220290:intron | 35.0% | |
| CACATATTCTCAAATCCAAC+TGG | - | chr2_1:68494282-68494301 | None:intergenic | 35.0% | |
| AGATGTTTGTCTCATGATTC+AGG | + | chr2_1:68494361-68494380 | Msa0220290:intron | 35.0% | |
| ! | GAGTTGTGTATGTTTTTCCT+TGG | + | chr2_1:68494422-68494441 | Msa0220290:intron | 35.0% |
| CATGGCTTAGCATCATATAA+AGG | - | chr2_1:68494786-68494805 | None:intergenic | 35.0% | |
| CCATGGTTATCAGTAAACAA+TGG | - | chr2_1:68494972-68494991 | None:intergenic | 35.0% | |
| CCATTGTTTACTGATAACCA+TGG | + | chr2_1:68494969-68494988 | Msa0220290:CDS | 35.0% | |
| GCATATATATACCATTGGTC+TGG | + | chr2_1:68495050-68495069 | Msa0220290:CDS | 35.0% | |
| CATCTGCAATGCTATTAGAT+AGG | - | chr2_1:68490638-68490657 | None:intergenic | 35.0% | |
| ! | AATGTGATCTTTTACATCCC+AGG | + | chr2_1:68495212-68495231 | Msa0220290:CDS | 35.0% |
| TATAATATAGGGAACCAGGT+TGG | - | chr2_1:68495254-68495273 | None:intergenic | 35.0% | |
| ! | ATACTGCTATTTGGCTATCA+TGG | + | chr2_1:68495271-68495290 | Msa0220290:CDS | 35.0% |
| !! | TCATGGTAGTGGTGAAAAAT+AGG | + | chr2_1:68495288-68495307 | Msa0220290:CDS | 35.0% |
| !! | CATGGTAGTGGTGAAAAATA+GGG | + | chr2_1:68495289-68495308 | Msa0220290:CDS | 35.0% |
| CATGGAATCTGAAGATAATG+GGG | - | chr2_1:68495319-68495338 | None:intergenic | 35.0% | |
| CTTCAGATTCCATGTAATGA+TGG | + | chr2_1:68495325-68495344 | Msa0220290:CDS | 35.0% | |
| AAATTGCTCTGCAGATTGTA+TGG | + | chr2_1:68495360-68495379 | Msa0220290:CDS | 35.0% | |
| AATTGCTCTGCAGATTGTAT+GGG | + | chr2_1:68495361-68495380 | Msa0220290:CDS | 35.0% | |
| GAACACTTGGGATGTATTAT+TGG | + | chr2_1:68495420-68495439 | Msa0220290:CDS | 35.0% | |
| !! | AAGCTGATTCGCTAATAACA+GGG | - | chr2_1:68495523-68495542 | None:intergenic | 35.0% |
| !! | AAAGCTGATTCGCTAATAAC+AGG | - | chr2_1:68495524-68495543 | None:intergenic | 35.0% |
| CATTCCCTACTTAATATAGG+AGG | + | chr2_1:68495548-68495567 | Msa0220290:CDS | 35.0% | |
| GAACCCTCCTATATTAAGTA+GGG | - | chr2_1:68495555-68495574 | None:intergenic | 35.0% | |
| TTAATATAGGAGGGTTCCAA+CGG | + | chr2_1:68495558-68495577 | Msa0220290:CDS | 35.0% | |
| CTCTTGACTACTTCCTAAAA+TGG | - | chr2_1:68491069-68491088 | None:intergenic | 35.0% | |
| !! | ATATGTGGTTTTGCAGTGAA+AGG | + | chr2_1:68495618-68495637 | Msa0220290:three_prime_UTR | 35.0% |
| !! | TTCTAAATTTTGGCATGGCA+GGG | - | chr2_1:68495765-68495784 | None:intergenic | 35.0% |
| !! | CAAGCTTCTAAATTTTGGCA+TGG | - | chr2_1:68495770-68495789 | None:intergenic | 35.0% |
| GAAGACGCGTTTCATTCAAT+GGG | + | chr2_1:68490061-68490080 | Msa0220290:CDS | 40.0% | |
| GGAGATGAAACAGCTATGAT+CGG | - | chr2_1:68490424-68490443 | None:intergenic | 40.0% | |
| CGATGGTATAAGTATGCTTC+TGG | - | chr2_1:68490547-68490566 | None:intergenic | 40.0% | |
| !! | GGCAATTGGTTGATAGATGT+TGG | - | chr2_1:68490715-68490734 | None:intergenic | 40.0% |
| GCTGTATAAAAAAGGGAACC+AGG | - | chr2_1:68490740-68490759 | None:intergenic | 40.0% | |
| CATGGAATCTCAAGATAAGG+GGG | - | chr2_1:68490801-68490820 | None:intergenic | 40.0% | |
| GTAGCATTCCCATCATTACA+TGG | - | chr2_1:68490819-68490838 | None:intergenic | 40.0% | |
| ! | TGTAATGATGGGAATGCTAC+TGG | + | chr2_1:68490819-68490838 | Msa0220290:CDS | 40.0% |
| GAACACTTGGGATGTATTAC+TGG | + | chr2_1:68490902-68490921 | Msa0220290:CDS | 40.0% | |
| ! | AGAGCCGATTCACTAATAAC+AGG | - | chr2_1:68491006-68491025 | None:intergenic | 40.0% |
| TTAATATAGGAGGGTTCCAG+TGG | + | chr2_1:68491040-68491059 | Msa0220290:intron | 40.0% | |
| ! | GTATATGGTCTTGAAGTGGA+AGG | + | chr2_1:68491162-68491181 | Msa0220290:intron | 40.0% |
| GGCATTTAGACCATCTACAA+TGG | + | chr2_1:68491478-68491497 | Msa0220290:intron | 40.0% | |
| ACCCTTGAATTTGGCACAAT+GGG | - | chr2_1:68491543-68491562 | None:intergenic | 40.0% | |
| AACCCTTGAATTTGGCACAA+TGG | - | chr2_1:68491544-68491563 | None:intergenic | 40.0% | |
| TGCCAAATTCAAGGGTTACT+TGG | + | chr2_1:68491547-68491566 | Msa0220290:intron | 40.0% | |
| CTCCAAGTAACCCTTGAATT+TGG | - | chr2_1:68491552-68491571 | None:intergenic | 40.0% | |
| TTCAAGGGTTACTTGGAGTT+TGG | + | chr2_1:68491554-68491573 | Msa0220290:intron | 40.0% | |
| TCAAGGGTTACTTGGAGTTT+GGG | + | chr2_1:68491555-68491574 | Msa0220290:intron | 40.0% | |
| TGCATAGGGGTTGAAGAATT+AGG | + | chr2_1:68491586-68491605 | Msa0220290:intron | 40.0% | |
| ! | TGTTACTTAGTGGATGACCT+TGG | + | chr2_1:68491652-68491671 | Msa0220290:intron | 40.0% |
| TAGATAGTCACCAAGCTAGA+GGG | - | chr2_1:68492226-68492245 | None:intergenic | 40.0% | |
| ! | GCGTTATGTGTTGGTCTATA+TGG | - | chr2_1:68492250-68492269 | None:intergenic | 40.0% |
| TCGTAGGGTAAGGGAAATTT+CGG | - | chr2_1:68492463-68492482 | None:intergenic | 40.0% | |
| TAACTACCAAAGTAGGTGTG+TGG | - | chr2_1:68492677-68492696 | None:intergenic | 40.0% | |
| GATGTTGATGTAGTTGTCAC+TGG | + | chr2_1:68492852-68492871 | Msa0220290:intron | 40.0% | |
| ACTTCGGCAACCTCTAAATT+TGG | - | chr2_1:68493111-68493130 | None:intergenic | 40.0% | |
| TTGGTGAACATTTAACGTCG+TGG | - | chr2_1:68493217-68493236 | None:intergenic | 40.0% | |
| CTAGATCCTTCCACAGAAAA+AGG | + | chr2_1:68493504-68493523 | Msa0220290:intron | 40.0% | |
| AAAGGTAATTACGGGAGAGA+AGG | - | chr2_1:68493751-68493770 | None:intergenic | 40.0% | |
| !! | TGTTCGTTAGGTTTTATGGG+AGG | + | chr2_1:68494053-68494072 | Msa0220290:intron | 40.0% |
| ! | ATCAGAAGTGTATGTGCTAC+AGG | + | chr2_1:68494227-68494246 | Msa0220290:intron | 40.0% |
| ! | TCAGAAGTGTATGTGCTACA+GGG | + | chr2_1:68494228-68494247 | Msa0220290:intron | 40.0% |
| AGACAAACAGAGGATAACCA+AGG | - | chr2_1:68494442-68494461 | None:intergenic | 40.0% | |
| ! | CAAATTCTGAGAAGCCAGAA+TGG | + | chr2_1:68495087-68495106 | Msa0220290:CDS | 40.0% |
| GCAGTATAATATAGGGAACC+AGG | - | chr2_1:68495258-68495277 | None:intergenic | 40.0% | |
| CTATTTGGCTATCATGGTAG+TGG | + | chr2_1:68495277-68495296 | Msa0220290:CDS | 40.0% | |
| GTAGCATTCCCATCATTACA+TGG | - | chr2_1:68490819-68490838 | None:intergenic | 40.0% | |
| ! | TGTAATGATGGGAATGCTAC+TGG | + | chr2_1:68490819-68490838 | Msa0220290:CDS | 40.0% |
| ATGCCACTGATACACTTCAA+GGG | + | chr2_1:68495398-68495417 | Msa0220290:CDS | 40.0% | |
| ATACACTTCAAGGGAACACT+TGG | + | chr2_1:68495407-68495426 | Msa0220290:CDS | 40.0% | |
| TACACTTCAAGGGAACACTT+GGG | + | chr2_1:68495408-68495427 | Msa0220290:CDS | 40.0% | |
| TCTATCAGATGTGCTCTTCT+TGG | + | chr2_1:68495482-68495501 | Msa0220290:CDS | 40.0% | |
| GGAACCCTCCTATATTAAGT+AGG | - | chr2_1:68495556-68495575 | None:intergenic | 40.0% | |
| !! | CTTCTAAATTTTGGCATGGC+AGG | - | chr2_1:68495766-68495785 | None:intergenic | 40.0% |
| CGAAGACGCGTTTCATTCAA+TGG | + | chr2_1:68490060-68490079 | Msa0220290:CDS | 45.0% | |
| TACTGAGTGAGAGGTTACCA+TGG | - | chr2_1:68490486-68490505 | None:intergenic | 45.0% | |
| GAACTGTGTCTTCGAGACAT+GGG | - | chr2_1:68490514-68490533 | None:intergenic | 45.0% | |
| AGAACTGTGTCTTCGAGACA+TGG | - | chr2_1:68490515-68490534 | None:intergenic | 45.0% | |
| GCATACTTATACCATCGGTC+TGG | + | chr2_1:68490550-68490569 | Msa0220290:CDS | 45.0% | |
| CAAATGCTGAGAAGCCAGAA+TGG | + | chr2_1:68490587-68490606 | Msa0220290:CDS | 45.0% | |
| AAAGTTCTCCACCACCATTC+TGG | - | chr2_1:68490604-68490623 | None:intergenic | 45.0% | |
| CATTGCAGATGTCTGCAGTT+GGG | + | chr2_1:68490647-68490666 | Msa0220290:CDS | 45.0% | |
| CAGTTTGGCTATCGAGTTAG+TGG | + | chr2_1:68490759-68490778 | Msa0220290:CDS | 45.0% | |
| ATGCCACTGATACACGTCAA+GGG | + | chr2_1:68490880-68490899 | Msa0220290:CDS | 45.0% | |
| ATACACGTCAAGGGAACACT+TGG | + | chr2_1:68490889-68490908 | Msa0220290:CDS | 45.0% | |
| TACACGTCAAGGGAACACTT+GGG | + | chr2_1:68490890-68490909 | Msa0220290:CDS | 45.0% | |
| ! | ATGGTCTTGAAGTGGAAGGA+AGG | + | chr2_1:68491166-68491185 | Msa0220290:intron | 45.0% |
| CCTTGAATTTGGCACAATGG+GGG | - | chr2_1:68491541-68491560 | None:intergenic | 45.0% | |
| CCCTTGAATTTGGCACAATG+GGG | - | chr2_1:68491542-68491561 | None:intergenic | 45.0% | |
| CCCCATTGTGCCAAATTCAA+GGG | + | chr2_1:68491539-68491558 | Msa0220290:intron | 45.0% | |
| CAAGGGTTACTTGGAGTTTG+GGG | + | chr2_1:68491556-68491575 | Msa0220290:intron | 45.0% | |
| AAGGGTTACTTGGAGTTTGG+GGG | + | chr2_1:68491557-68491576 | Msa0220290:intron | 45.0% | |
| !! | TTTGGGGGAGTGTTTGCATA+GGG | + | chr2_1:68491572-68491591 | Msa0220290:intron | 45.0% |
| ! | TTAGTGGATGACCTTGGTGA+AGG | + | chr2_1:68491658-68491677 | Msa0220290:intron | 45.0% |
| GATGAAGTACACCTTCACCA+AGG | - | chr2_1:68491672-68491691 | None:intergenic | 45.0% | |
| AGATAGTCACCAAGCTAGAG+GGG | - | chr2_1:68492225-68492244 | None:intergenic | 45.0% | |
| CTAGATAGTCACCAAGCTAG+AGG | - | chr2_1:68492227-68492246 | None:intergenic | 45.0% | |
| !! | CAAACGGAAGCGTTATGTGT+TGG | - | chr2_1:68492259-68492278 | None:intergenic | 45.0% |
| CATAACGCTTCCGTTTGAGT+AGG | + | chr2_1:68492262-68492281 | Msa0220290:intron | 45.0% | |
| ! | CTTCCGTTTGAGTAGGTTGA+TGG | + | chr2_1:68492269-68492288 | Msa0220290:intron | 45.0% |
| CGTCCATCAACCTACTCAAA+CGG | - | chr2_1:68492275-68492294 | None:intergenic | 45.0% | |
| !! | TTGAGTAGGTTGATGGACGT+AGG | + | chr2_1:68492276-68492295 | Msa0220290:intron | 45.0% |
| GAAGTGATGTAACACCGTCT+GGG | - | chr2_1:68492376-68492395 | None:intergenic | 45.0% | |
| GTTGTAGTTTATGGCAACGG+AGG | - | chr2_1:68492422-68492441 | None:intergenic | 45.0% | |
| ACTCGTACTTCGTAGGGTAA+GGG | - | chr2_1:68492472-68492491 | None:intergenic | 45.0% | |
| AACTCGTACTTCGTAGGGTA+AGG | - | chr2_1:68492473-68492492 | None:intergenic | 45.0% | |
| TGGATCAGAGGGTTTCATAC+TGG | - | chr2_1:68492641-68492660 | None:intergenic | 45.0% | |
| TTCACTCCACACACCTACTT+TGG | + | chr2_1:68492668-68492687 | Msa0220290:intron | 45.0% | |
| ATGCACTAGGTCCAATAGAG+AGG | + | chr2_1:68493014-68493033 | Msa0220290:intron | 45.0% | |
| TGCACTAGGTCCAATAGAGA+GGG | + | chr2_1:68493015-68493034 | Msa0220290:intron | 45.0% | |
| !!! | AGAAGCGTTGCCTTTTTCTG+TGG | - | chr2_1:68493517-68493536 | None:intergenic | 45.0% |
| AGGAGGACTTGTATGTCAGA+AGG | - | chr2_1:68493541-68493560 | None:intergenic | 45.0% | |
| AAAGAGGTGGGTAAGGGTAA+CGG | + | chr2_1:68493623-68493642 | Msa0220290:intron | 45.0% | |
| TAACGGAAGAATCGAGAGTC+AGG | + | chr2_1:68493640-68493659 | Msa0220290:intron | 45.0% | |
| ! | AGAAAGAAGACGATGATGGC+CGG | + | chr2_1:68493670-68493689 | Msa0220290:intron | 45.0% |
| GTAATTACGGGAGAGAAGGA+AGG | - | chr2_1:68493747-68493766 | None:intergenic | 45.0% | |
| AACGATGTCAGTGTCATGTC+TGG | - | chr2_1:68494114-68494133 | None:intergenic | 45.0% | |
| !!! | CATGTGGTTTTTGGCTACAG+TGG | + | chr2_1:68494855-68494874 | Msa0220290:intron | 45.0% |
| ! | AGTACTGGAACTGCTTCTTC+GGG | - | chr2_1:68495021-68495040 | None:intergenic | 45.0% |
| !! | GAGTACTGGAACTGCTTCTT+CGG | - | chr2_1:68495022-68495041 | None:intergenic | 45.0% |
| GGATTCGAAAACCAGACCAA+TGG | - | chr2_1:68495064-68495083 | None:intergenic | 45.0% | |
| CTGGCTTCTCAGAATTTGCA+GGG | - | chr2_1:68495085-68495104 | None:intergenic | 45.0% | |
| ! | TCTGGCTTCTCAGAATTTGC+AGG | - | chr2_1:68495086-68495105 | None:intergenic | 45.0% |
| ! | ATTCTGAGAAGCCAGAATGG+TGG | + | chr2_1:68495090-68495109 | Msa0220290:CDS | 45.0% |
| AAAGTTCTCCACCACCATTC+TGG | - | chr2_1:68490604-68490623 | None:intergenic | 45.0% | |
| CATGCCACTGATACACTTCA+AGG | + | chr2_1:68495397-68495416 | Msa0220290:CDS | 45.0% | |
| GTTCCCTTGAAGTGTATCAG+TGG | - | chr2_1:68495404-68495423 | None:intergenic | 45.0% | |
| CTTGGGATGTATTATTGGGC+TGG | + | chr2_1:68495425-68495444 | Msa0220290:CDS | 45.0% | |
| !! | GATGTATTATTGGGCTGGTG+TGG | + | chr2_1:68495430-68495449 | Msa0220290:CDS | 45.0% |
| CTACTTCCTAAAATGGCCGT+TGG | - | chr2_1:68495577-68495596 | None:intergenic | 45.0% | |
| !! | GTGGTTTTGCAGTGAAAGGA+AGG | + | chr2_1:68495622-68495641 | Msa0220290:three_prime_UTR | 45.0% |
| !! | TAAAAATAAAAATAAAAATG+GGG | - | chr2_1:68494908-68494927 | None:intergenic | 5.0% |
| !!! | TTTATTTTTATTTTTATTTC+AGG | + | chr2_1:68494912-68494931 | Msa0220290:intron | 5.0% |
| GATGAAACAGCTGTGAGTCG+TGG | - | chr2_1:68490445-68490464 | None:intergenic | 50.0% | |
| TGGGAACACTACTGAGTGAG+AGG | - | chr2_1:68490495-68490514 | None:intergenic | 50.0% | |
| GGATTCGAAAACCAGACCGA+TGG | - | chr2_1:68490564-68490583 | None:intergenic | 50.0% | |
| CTGGCTTCTCAGCATTTGCA+GGG | - | chr2_1:68490585-68490604 | None:intergenic | 50.0% | |
| ! | TCTGGCTTCTCAGCATTTGC+AGG | - | chr2_1:68490586-68490605 | None:intergenic | 50.0% |
| ATGCTGAGAAGCCAGAATGG+TGG | + | chr2_1:68490590-68490609 | Msa0220290:CDS | 50.0% | |
| GCATTGCAGATGTCTGCAGT+TGG | + | chr2_1:68490646-68490665 | Msa0220290:CDS | 50.0% | |
| CTATCAACCAATTGCCGACC+TGG | + | chr2_1:68490719-68490738 | Msa0220290:CDS | 50.0% | |
| TGCTCGCAACCCATACTATC+TGG | - | chr2_1:68490855-68490874 | None:intergenic | 50.0% | |
| CATGCCACTGATACACGTCA+AGG | + | chr2_1:68490879-68490898 | Msa0220290:CDS | 50.0% | |
| GTTCCCTTGACGTGTATCAG+TGG | - | chr2_1:68490886-68490905 | None:intergenic | 50.0% | |
| CTTGGGATGTATTACTGGGC+TGG | + | chr2_1:68490907-68490926 | Msa0220290:CDS | 50.0% | |
| !! | GATGTATTACTGGGCTGGTG+TGG | + | chr2_1:68490912-68490931 | Msa0220290:CDS | 50.0% |
| ATATAGGAGGGTTCCAGTGG+CGG | + | chr2_1:68491043-68491062 | Msa0220290:intron | 50.0% | |
| ! | AGCATGGTGCTAAATAGGGG+AGG | - | chr2_1:68491509-68491528 | None:intergenic | 50.0% |
| !! | ATGGGGGTGCCTATTTAGCA+TGG | - | chr2_1:68491525-68491544 | None:intergenic | 50.0% |
| CCCCCATTGTGCCAAATTCA+AGG | + | chr2_1:68491538-68491557 | Msa0220290:intron | 50.0% | |
| !! | GTTTGGGGGAGTGTTTGCAT+AGG | + | chr2_1:68491571-68491590 | Msa0220290:intron | 50.0% |
| !! | TTGGGGGAGTGTTTGCATAG+GGG | + | chr2_1:68491573-68491592 | Msa0220290:intron | 50.0% |
| GATAGTCACCAAGCTAGAGG+GGG | - | chr2_1:68492224-68492243 | None:intergenic | 50.0% | |
| AGTTGATCCTTCAGCCCAGA+CGG | + | chr2_1:68492359-68492378 | Msa0220290:intron | 50.0% | |
| CGAAGTGATGTAACACCGTC+TGG | - | chr2_1:68492377-68492396 | None:intergenic | 50.0% | |
| TGAACAGTGACGAGTCGACA+AGG | + | chr2_1:68492585-68492604 | Msa0220290:intron | 50.0% | |
| ! | CACTGGACACCTCCTTTTTG+CGG | + | chr2_1:68492972-68492991 | Msa0220290:intron | 50.0% |
| ! | CTTCAATGCCCTCTTTGAGG+CGG | - | chr2_1:68493482-68493501 | None:intergenic | 50.0% |
| GAGCTTCAATGCCCTCTTTG+AGG | - | chr2_1:68493485-68493504 | None:intergenic | 50.0% | |
| ! | GCGTTGCCTTTTTCTGTGGA+AGG | - | chr2_1:68493513-68493532 | None:intergenic | 50.0% |
| ATTACGGGAGAGAAGGAAGG+CGG | - | chr2_1:68493744-68493763 | None:intergenic | 50.0% | |
| CATTGCAGATGTCTGCTGCT+GGG | + | chr2_1:68495147-68495166 | Msa0220290:CDS | 50.0% | |
| ! | TAGGGAACCAGGTTGGCAAT+CGG | - | chr2_1:68495247-68495266 | None:intergenic | 50.0% |
| !! | AGGGTTCCAACGGCCATTTT+AGG | + | chr2_1:68495568-68495587 | Msa0220290:CDS | 50.0% |
| ! | CTTGCCATCACAGCTCTAGC+AGG | + | chr2_1:68490096-68490115 | Msa0220290:CDS | 55.0% |
| ACTGCCTGCTAGAGCTGTGA+TGG | - | chr2_1:68490103-68490122 | None:intergenic | 55.0% | |
| CTGAGAAGCCAGAATGGTGG+TGG | + | chr2_1:68490593-68490612 | Msa0220290:CDS | 55.0% | |
| AAGGGAACCAGGTCGGCAAT+TGG | - | chr2_1:68490729-68490748 | None:intergenic | 55.0% | |
| TCCATCAGGTGTGCTCTGCT+TGG | + | chr2_1:68490964-68490983 | Msa0220290:intron | 55.0% | |
| ACCAAGCAGAGCACACCTGA+TGG | - | chr2_1:68490968-68490987 | None:intergenic | 55.0% | |
| GGAGGACTCCCCATTGTAGA+TGG | - | chr2_1:68491491-68491510 | None:intergenic | 55.0% | |
| GCTATTCACCCCCTCTAGCT+TGG | + | chr2_1:68492213-68492232 | Msa0220290:intron | 55.0% | |
| CAATCACGGAGACACGAGGA+TGG | - | chr2_1:68492318-68492337 | None:intergenic | 55.0% | |
| GACTCAATCACGGAGACACG+AGG | - | chr2_1:68492322-68492341 | None:intergenic | 55.0% | |
| GTCTGGGCTGAAGGATCAAC+TGG | - | chr2_1:68492360-68492379 | None:intergenic | 55.0% | |
| TGTAACACCGTCTGGGCTGA+AGG | - | chr2_1:68492369-68492388 | None:intergenic | 55.0% | |
| CAATGGCACCGCCTCAAAGA+GGG | + | chr2_1:68493471-68493490 | Msa0220290:intron | 55.0% | |
| ! | AGAAGCGTAGGTGGTGGTTG+AGG | - | chr2_1:68493716-68493735 | None:intergenic | 55.0% |
| ! | GAGAAGAGAAGCGTAGGTGG+TGG | - | chr2_1:68493722-68493741 | None:intergenic | 55.0% |
| ! | AAGGCGGAGAAGAGAAGCGT+AGG | - | chr2_1:68493728-68493747 | None:intergenic | 55.0% |
| CGTGTCTGACACGTCTGGTT+GGG | - | chr2_1:68494195-68494214 | None:intergenic | 55.0% | |
| TCGTGTCTGACACGTCTGGT+TGG | - | chr2_1:68494196-68494215 | None:intergenic | 55.0% | |
| GTGTTCGTGTCTGACACGTC+TGG | - | chr2_1:68494200-68494219 | None:intergenic | 55.0% | |
| ! | CTTGCCATCACAGCTCTAGC+AGG | + | chr2_1:68490096-68490115 | Msa0220290:CDS | 55.0% |
| ACTGCCTGCTAGAGCTGTGA+TGG | - | chr2_1:68490103-68490122 | None:intergenic | 55.0% | |
| ! | AGCTCTAGCAGGCAGTTCTC+TGG | + | chr2_1:68494575-68494594 | Msa0220290:CDS | 55.0% |
| GCTCTAGCAGGCAGTTCTCT+GGG | + | chr2_1:68494576-68494595 | Msa0220290:CDS | 55.0% | |
| CACTGAGTGAGAGGTGACCA+TGG | - | chr2_1:68494989-68495008 | None:intergenic | 55.0% | |
| !! | AGGTTGGAGCACTGAGTGAG+AGG | - | chr2_1:68494998-68495017 | None:intergenic | 55.0% |
| GAACTGCTTCTTCGGGAGGT+TGG | - | chr2_1:68495014-68495033 | None:intergenic | 55.0% | |
| ACTGGAACTGCTTCTTCGGG+AGG | - | chr2_1:68495018-68495037 | None:intergenic | 55.0% | |
| CTGAGAAGCCAGAATGGTGG+TGG | + | chr2_1:68490593-68490612 | Msa0220290:CDS | 55.0% | |
| GCATTGCAGATGTCTGCTGC+TGG | + | chr2_1:68495146-68495165 | Msa0220290:CDS | 55.0% | |
| GCAATCGGTTGACAGCTCCT+GGG | - | chr2_1:68495232-68495251 | None:intergenic | 55.0% | |
| CTGTCAACCGATTGCCAACC+TGG | + | chr2_1:68495237-68495256 | Msa0220290:CDS | 55.0% | |
| !! | TTATTGGGCTGGTGTGGCGT+TGG | + | chr2_1:68495436-68495455 | Msa0220290:CDS | 55.0% |
| !! | TTACTGGGCTGGTGTGGCGT+TGG | + | chr2_1:68490918-68490937 | Msa0220290:CDS | 60.0% |
| !! | GTTCCAGTGGCGGCCGTTTT+AGG | + | chr2_1:68491053-68491072 | Msa0220290:intron | 60.0% |
| CTTCCTAAAACGGCCGCCAC+TGG | - | chr2_1:68491059-68491078 | None:intergenic | 60.0% | |
| !! | GGAGACACGAGGATGGTGGA+TGG | - | chr2_1:68492311-68492330 | None:intergenic | 60.0% |
| TCACGGAGACACGAGGATGG+TGG | - | chr2_1:68492315-68492334 | None:intergenic | 60.0% | |
| !! | CCTCTTTGAGGCGGTGCCAT+TGG | - | chr2_1:68493473-68493492 | None:intergenic | 60.0% |
| CCAATGGCACCGCCTCAAAG+AGG | + | chr2_1:68493470-68493489 | Msa0220290:intron | 60.0% | |
| GGCGGCTGCGGTTAATTGAC+CGG | - | chr2_1:68493692-68493711 | None:intergenic | 60.0% | |
| ! | AGCGTAGGTGGTGGTTGAGG+CGG | - | chr2_1:68493713-68493732 | None:intergenic | 60.0% |
| ! | GCGGAGAAGAGAAGCGTAGG+TGG | - | chr2_1:68493725-68493744 | None:intergenic | 60.0% |
| GGCAATCGGTTGACAGCTCC+TGG | - | chr2_1:68495233-68495252 | None:intergenic | 60.0% | |
| ! | GTAGGTGGTGGTTGAGGCGG+CGG | - | chr2_1:68493710-68493729 | None:intergenic | 65.0% |
| GGTGGTTGAGGCGGCGGCTG+CGG | - | chr2_1:68493704-68493723 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 68490048 | 68495886 | 68490048 | ID=Msa0220290;Name=Msa0220290 |
| chr2_1 | mRNA | 68490048 | 68495886 | 68490048 | ID=Msa0220290-mRNA-1;Parent=Msa0220290;Name=Msa0220290-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.33|0.5|0.75|1|1|4|297|463 |
| chr2_1 | exon | 68490048 | 68490129 | 68490048 | ID=Msa0220290-mRNA-1:exon:19400;Parent=Msa0220290-mRNA-1 |
| chr2_1 | exon | 68490407 | 68490971 | 68490407 | ID=Msa0220290-mRNA-1:exon:19401;Parent=Msa0220290-mRNA-1 |
| chr2_1 | exon | 68494509 | 68494597 | 68494509 | ID=Msa0220290-mRNA-1:exon:19402;Parent=Msa0220290-mRNA-1 |
| chr2_1 | exon | 68494934 | 68495886 | 68494934 | ID=Msa0220290-mRNA-1:exon:19403;Parent=Msa0220290-mRNA-1 |
| chr2_1 | CDS | 68490048 | 68490129 | 68490048 | ID=Msa0220290-mRNA-1:cds;Parent=Msa0220290-mRNA-1 |
| chr2_1 | CDS | 68490407 | 68490971 | 68490407 | ID=Msa0220290-mRNA-1:cds;Parent=Msa0220290-mRNA-1 |
| chr2_1 | CDS | 68494509 | 68494597 | 68494509 | ID=Msa0220290-mRNA-1:cds;Parent=Msa0220290-mRNA-1 |
| chr2_1 | CDS | 68494934 | 68495589 | 68494934 | ID=Msa0220290-mRNA-1:cds;Parent=Msa0220290-mRNA-1 |
| chr2_1 | three_prime_UTR | 68495590 | 68495886 | 68495590 | ID=Msa0220290-mRNA-1:three_prime_utr;Parent=Msa0220290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
