AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0870610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870610 MtrunA17_Chr6g0452041 94.902 1275 64 1 1 1274 1 1275 0.0 2459
Msa0870610 MtrunA17_Chr6g0452171 90.047 1276 125 2 1 1274 1 1276 0.0 2264
Msa0870610 MtrunA17_Chr6g0452111 86.052 1269 168 2 6 1273 13 1273 0.0 2230
Msa0870610 MtrunA17_Chr6g0452141 87.147 1276 159 3 1 1274 1 1273 0.0 2216
Msa0870610 MtrunA17_Chr6g0451881 82.759 1276 205 4 1 1274 1 1263 0.0 2143
Msa0870610 MtrunA17_Chr6g0451911 79.173 1282 250 6 1 1274 1 1273 0.0 2034
Msa0870610 MtrunA17_Chr7g0233901 68.864 1259 366 4 7 1261 3 1239 0.0 1786
Msa0870610 MtrunA17_Chr6g0452061 82.781 784 123 4 492 1274 13 785 0.0 1302
Msa0870610 MtrunA17_Chr6g0452061 37.762 572 342 6 32 599 209 770 4.37e-110 365
Msa0870610 MtrunA17_Chr4g0041871 52.160 1250 578 10 23 1260 5 1246 0.0 1297
Msa0870610 MtrunA17_Chr6g0486841 51.200 1250 585 7 14 1259 11 1239 0.0 1284
Msa0870610 MtrunA17_Chr3g0123411 53.436 1164 505 9 115 1260 1 1145 0.0 1212
Msa0870610 MtrunA17_Chr3g0123411 35.144 589 362 5 25 603 570 1148 5.96e-107 365
Msa0870610 MtrunA17_Chr6g0453051 45.295 1254 660 11 13 1261 16 1248 0.0 1106
Msa0870610 MtrunA17_Chr6g0453051 38.423 596 359 4 672 1264 15 605 4.72e-119 400
Msa0870610 MtrunA17_Chr5g0410921 45.136 1254 656 11 13 1264 9 1232 0.0 1080
Msa0870610 MtrunA17_Chr5g0410921 41.065 582 324 9 32 606 665 1234 5.14e-125 417
Msa0870610 MtrunA17_Chr7g0264631 43.151 1263 696 11 12 1264 75 1325 0.0 1079
Msa0870610 MtrunA17_Chr1g0180601 43.541 1254 688 12 21 1266 60 1301 0.0 1046
Msa0870610 MtrunA17_Chr4g0069401 43.844 1259 687 9 13 1259 22 1272 0.0 1005
Msa0870610 MtrunA17_Chr1g0193991 43.805 1251 690 10 13 1259 42 1283 0.0 1001
Msa0870610 MtrunA17_Chr1g0193991 37.280 625 381 7 641 1259 8 627 6.13e-115 390
Msa0870610 MtrunA17_Chr2g0285311 42.959 1257 689 12 14 1259 25 1264 0.0 1001
Msa0870610 MtrunA17_Chr2g0285191 42.028 1292 689 11 14 1259 15 1292 0.0 994
Msa0870610 MtrunA17_Chr2g0285191 41.809 586 334 4 13 596 709 1289 1.21e-124 417
Msa0870610 MtrunA17_Chr2g0285301 42.565 1271 695 12 5 1259 9 1260 0.0 981
Msa0870610 MtrunA17_Chr2g0285301 37.584 596 362 5 671 1260 12 603 9.42e-112 380
Msa0870610 MtrunA17_Chr4g0069361 41.573 1246 705 9 24 1260 44 1275 0.0 977
Msa0870610 MtrunA17_Chr4g0069411 43.151 1263 694 11 5 1259 42 1288 0.0 976
Msa0870610 MtrunA17_Chr4g0069411 35.505 614 381 9 663 1272 41 643 1.81e-105 363
Msa0870610 MtrunA17_Chr4g0069351 41.316 1261 712 10 13 1259 28 1274 0.0 973
Msa0870610 MtrunA17_Chr3g0119381 41.667 1260 716 10 5 1256 44 1292 0.0 972
Msa0870610 MtrunA17_Chr3g0119381 34.720 625 392 8 661 1274 38 657 2.32e-112 383
Msa0870610 MtrunA17_Chr4g0039821 41.073 1249 713 9 20 1259 38 1272 0.0 968
Msa0870610 MtrunA17_Chr6g0481921 43.579 1168 634 9 103 1259 13 1166 0.0 944
Msa0870610 MtrunA17_Chr6g0481921 40.317 568 333 3 36 601 605 1168 2.60e-122 408
Msa0870610 MtrunA17_Chr3g0138211 42.035 1268 689 9 5 1259 42 1276 0.0 929
Msa0870610 MtrunA17_Chr3g0138211 39.138 580 334 5 36 601 704 1278 1.44e-111 380
Msa0870610 MtrunA17_Chr3g0138211 35.458 612 381 8 666 1272 41 643 1.49e-98 343
Msa0870610 MtrunA17_Chr1g0156821 39.953 1264 693 10 13 1263 26 1236 0.0 912
Msa0870610 MtrunA17_Chr1g0156821 36.565 588 363 4 25 608 660 1241 1.36e-118 399
Msa0870610 MtrunA17_Chr8g0344651 39.509 1263 717 18 17 1263 254 1485 0.0 857
Msa0870610 MtrunA17_Chr6g0452071 91.189 454 39 1 808 1261 4 456 0.0 842
Msa0870610 MtrunA17_Chr6g0452071 39.387 457 264 8 152 600 4 455 1.34e-99 325
Msa0870610 MtrunA17_Chr6g0452051 89.831 413 42 0 81 493 2 414 0.0 773
Msa0870610 MtrunA17_Chr6g0452051 31.220 410 277 4 742 1150 7 412 3.83e-62 219
Msa0870610 MtrunA17_Chr1g0194031 42.137 833 471 8 11 839 35 860 0.0 646
Msa0870610 MtrunA17_Chr1g0194031 37.377 610 374 5 655 1260 18 623 7.53e-119 392
Msa0870610 MtrunA17_Chr8g0366481 41.957 603 342 4 662 1261 29 626 6.31e-153 474
Msa0870610 MtrunA17_Chr8g0366481 41.115 574 321 7 33 600 63 625 1.04e-119 386
Msa0870610 MtrunA17_Chr6g0452091 84.646 254 20 1 59 312 7 241 1.10e-142 432
Msa0870610 MtrunA17_Chr6g0452091 22.613 199 153 1 749 947 22 219 1.85e-14 74.7
Msa0870610 MtrunA17_Chr6g0452081 93.074 231 12 2 335 565 1 227 1.36e-142 431
Msa0870610 MtrunA17_Chr6g0452081 51.515 231 106 2 994 1224 3 227 1.00e-72 241
Msa0870610 MtrunA17_Chr1g0212701 34.680 718 418 12 556 1256 699 1382 1.09e-128 430
Msa0870610 MtrunA17_Chr1g0212701 38.474 616 362 7 21 635 68 667 6.91e-125 419
Msa0870610 MtrunA17_Chr1g0212701 36.268 568 357 4 32 597 819 1383 4.91e-102 355
Msa0870610 MtrunA17_Chr1g0212701 32.872 578 378 6 679 1256 66 633 1.50e-80 291
Msa0870610 MtrunA17_Chr7g0222781 33.241 725 437 8 556 1256 689 1390 3.85e-126 423
Msa0870610 MtrunA17_Chr7g0222781 38.449 619 366 8 21 634 67 675 1.24e-124 419
Msa0870610 MtrunA17_Chr7g0222781 35.714 588 370 7 13 597 809 1391 6.12e-100 348
Msa0870610 MtrunA17_Chr7g0222781 31.993 572 378 4 679 1245 65 630 3.90e-82 296
Msa0870610 MtrunA17_Chr3g0128381 35.343 597 373 4 671 1259 45 636 2.67e-120 388
Msa0870610 MtrunA17_Chr3g0128381 33.618 586 348 11 36 599 70 636 3.67e-92 311
Msa0870610 MtrunA17_Chr1g0194001 53.908 371 169 2 217 585 2 372 3.44e-117 370
Msa0870610 MtrunA17_Chr1g0194001 46.774 372 197 1 874 1245 3 373 1.93e-105 338
Msa0870610 MtrunA17_Chr8g0366451 44.976 418 224 4 79 493 33 447 2.51e-115 367
Msa0870610 MtrunA17_Chr8g0366451 32.771 415 272 5 738 1150 36 445 1.71e-61 218
Msa0870610 MtrunA17_Chr4g0061601 37.670 515 307 8 745 1255 117 621 3.51e-99 330
Msa0870610 MtrunA17_Chr4g0061601 39.400 533 286 16 81 595 108 621 6.74e-98 327
Msa0870610 MtrunA17_Chr6g0474071 38.876 427 215 5 872 1255 25 448 1.40e-80 272
Msa0870610 MtrunA17_Chr6g0474071 50.207 241 115 4 358 595 210 448 1.89e-66 232
Msa0870610 MtrunA17_Chr3g0128391 39.221 385 231 3 109 492 5 387 4.22e-79 271
Msa0870610 MtrunA17_Chr3g0128391 29.820 389 269 3 762 1150 2 386 1.19e-50 189
Msa0870610 MtrunA17_Chr3g0128391 69.444 108 32 1 492 599 446 552 2.35e-38 152
Msa0870610 MtrunA17_Chr3g0128391 66.355 107 34 1 1153 1259 448 552 9.27e-35 141
Msa0870610 MtrunA17_Chr7g0227391 33.708 534 325 11 80 599 146 664 4.40e-74 260
Msa0870610 MtrunA17_Chr7g0227391 33.017 527 324 11 745 1259 155 664 3.59e-72 255
Msa0870610 MtrunA17_Chr5g0412741 32.874 581 354 13 694 1259 137 696 5.89e-74 261
Msa0870610 MtrunA17_Chr5g0412741 34.652 531 298 11 91 599 193 696 2.05e-72 256
Msa0870610 MtrunA17_Chr8g0337191 25.125 999 619 36 325 1272 572 1492 4.02e-62 233
Msa0870610 MtrunA17_Chr8g0337191 22.719 581 425 10 38 603 908 1479 6.83e-34 142
Msa0870610 MtrunA17_Chr8g0337191 24.552 391 263 10 863 1246 455 820 2.25e-21 101
Msa0870610 MtrunA17_Chr1g0178481 30.813 529 321 11 744 1247 107 615 4.27e-62 224
Msa0870610 MtrunA17_Chr1g0178481 40.580 276 154 5 324 594 344 614 7.18e-49 185
Msa0870610 MtrunA17_Chr2g0285731 25.441 908 578 28 368 1245 622 1460 5.42e-61 230
Msa0870610 MtrunA17_Chr2g0285731 24.806 516 346 17 112 605 984 1479 1.73e-26 118
Msa0870610 MtrunA17_Chr2g0285731 28.889 225 144 4 1024 1247 621 830 5.85e-22 103
Msa0870610 MtrunA17_Chr6g0463201 23.344 951 616 27 326 1246 590 1457 5.73e-60 226
Msa0870610 MtrunA17_Chr6g0463201 31.250 272 172 6 335 597 1202 1467 1.22e-31 135
Msa0870610 MtrunA17_Chr6g0463201 25.445 393 248 9 867 1245 476 837 7.65e-25 112
Msa0870610 MtrunA17_Chr6g0463131 24.611 963 595 33 326 1249 586 1456 5.90e-60 226
Msa0870610 MtrunA17_Chr6g0463131 25.141 533 361 14 84 597 950 1463 1.19e-37 154
Msa0870610 MtrunA17_Chr6g0463131 26.136 440 278 11 819 1245 428 833 1.67e-30 131
Msa0870610 MtrunA17_Chr5g0433051 31.285 537 312 15 753 1266 203 705 1.71e-59 218
Msa0870610 MtrunA17_Chr5g0433051 41.776 304 161 6 293 587 394 690 6.98e-58 214
Msa0870610 MtrunA17_Chr8g0337121 24.800 1000 621 35 325 1272 592 1512 2.06e-59 224
Msa0870610 MtrunA17_Chr8g0337121 22.948 536 395 9 76 603 974 1499 5.39e-34 142
Msa0870610 MtrunA17_Chr8g0337121 24.103 390 266 10 863 1246 475 840 2.51e-21 101
Msa0870610 MtrunA17_Chr3g0080941 26.294 947 563 38 371 1264 626 1490 3.20e-59 224
Msa0870610 MtrunA17_Chr3g0080941 32.083 240 159 3 359 597 1233 1469 2.05e-26 118
Msa0870610 MtrunA17_Chr6g0463121 23.874 955 606 28 326 1246 585 1452 6.27e-59 223
Msa0870610 MtrunA17_Chr6g0463121 26.277 548 343 19 83 603 960 1473 7.08e-39 158
Msa0870610 MtrunA17_Chr6g0463121 23.922 464 311 12 820 1272 428 860 4.46e-26 117
Msa0870610 MtrunA17_Chr1g0195691 24.252 903 576 26 379 1246 668 1497 2.06e-58 221
Msa0870610 MtrunA17_Chr1g0195691 31.023 303 182 8 312 597 1214 1506 5.43e-27 120
Msa0870610 MtrunA17_Chr1g0195691 31.455 213 129 3 1036 1247 668 864 1.33e-22 105
Msa0870610 MtrunA17_Chr1g0183191 26.436 923 592 28 368 1257 650 1518 4.93e-58 220
Msa0870610 MtrunA17_Chr1g0183191 24.685 555 368 10 79 608 1000 1529 1.57e-33 141
Msa0870610 MtrunA17_Chr1g0183191 25.554 587 369 21 693 1257 325 865 9.55e-29 125
Msa0870610 MtrunA17_Chr8g0353781 26.159 906 572 30 368 1249 606 1438 5.43e-58 220
Msa0870610 MtrunA17_Chr8g0353781 31.475 305 189 8 303 596 1148 1443 3.98e-32 136
Msa0870610 MtrunA17_Chr8g0353781 24.719 445 274 13 849 1271 430 835 3.47e-24 110
Msa0870610 MtrunA17_Chr5g0445741 23.570 1014 637 28 298 1257 556 1485 8.39e-58 219
Msa0870610 MtrunA17_Chr5g0445741 24.023 512 342 13 108 596 997 1484 4.15e-32 136
Msa0870610 MtrunA17_Chr5g0445741 26.448 518 300 17 792 1273 408 880 1.84e-26 118
Msa0870610 MtrunA17_Chr6g0463141 23.014 982 613 28 326 1249 584 1480 3.08e-57 218
Msa0870610 MtrunA17_Chr6g0463141 24.655 507 346 14 108 597 1000 1487 8.34e-31 132
Msa0870610 MtrunA17_Chr6g0463141 22.851 442 276 10 841 1245 444 857 3.91e-20 97.4
Msa0870610 MtrunA17_Chr5g0445671 23.968 993 634 31 298 1244 165 1082 5.27e-56 213
Msa0870610 MtrunA17_Chr5g0445671 23.909 527 343 13 108 602 606 1106 3.04e-31 133
Msa0870610 MtrunA17_Chr5g0445671 25.567 485 284 14 792 1247 17 453 1.79e-26 117
Msa0870610 MtrunA17_Chr8g0353541 25.134 935 600 31 361 1263 208 1074 5.72e-56 212
Msa0870610 MtrunA17_Chr8g0353541 31.148 305 190 8 303 596 765 1060 2.33e-32 137
Msa0870610 MtrunA17_Chr8g0353541 24.943 437 283 11 849 1271 39 444 3.98e-26 116
Msa0870610 MtrunA17_Chr8g0341811 24.403 922 551 25 368 1249 444 1259 3.09e-55 211
Msa0870610 MtrunA17_Chr8g0341811 26.245 522 333 16 92 596 778 1264 8.46e-32 135
Msa0870610 MtrunA17_Chr8g0341811 24.272 412 275 11 849 1249 268 653 9.56e-21 99.4
Msa0870610 MtrunA17_Chr3g0101441 24.134 982 590 35 347 1264 413 1303 3.13e-55 211
Msa0870610 MtrunA17_Chr3g0101441 23.179 604 383 17 693 1261 112 669 7.54e-26 116
Msa0870610 MtrunA17_Chr3g0101461 23.741 973 606 32 347 1264 413 1304 5.21e-55 210
Msa0870610 MtrunA17_Chr3g0101461 22.742 598 393 14 693 1261 112 669 3.08e-24 110
Msa0870610 MtrunA17_Chr5g0433071 37.288 413 234 11 189 587 291 692 6.33e-55 205
Msa0870610 MtrunA17_Chr5g0433071 33.264 481 266 14 807 1266 261 707 1.07e-54 204
Msa0870610 MtrunA17_Chr7g0262191 24.468 940 582 26 361 1244 639 1506 1.16e-53 206
Msa0870610 MtrunA17_Chr7g0262191 32.599 227 152 1 377 603 1299 1524 1.02e-29 129
Msa0870610 MtrunA17_Chr7g0262191 26.396 394 254 8 863 1247 487 853 5.92e-28 123
Msa0870610 MtrunA17_Chr8g0341851 22.148 1201 779 36 104 1249 348 1447 2.32e-53 205
Msa0870610 MtrunA17_Chr8g0341851 29.667 300 206 4 298 596 1158 1453 3.47e-34 143
Msa0870610 MtrunA17_Chr8g0341851 24.883 426 281 12 856 1272 448 843 1.42e-22 105
Msa0870610 MtrunA17_Chr6g0471281 23.933 961 604 32 326 1249 586 1456 3.50e-52 201
Msa0870610 MtrunA17_Chr6g0471281 24.906 534 363 15 81 596 949 1462 8.71e-28 122
Msa0870610 MtrunA17_Chr6g0471281 25.455 440 281 12 819 1245 428 833 1.70e-26 118
Msa0870610 MtrunA17_Chr3g0101471 23.108 991 604 32 337 1261 401 1299 4.46e-52 201
Msa0870610 MtrunA17_Chr3g0101471 24.706 510 340 16 108 596 807 1293 2.39e-31 134
Msa0870610 MtrunA17_Chr3g0101471 23.658 596 388 19 693 1261 112 667 2.96e-26 117
Msa0870610 MtrunA17_Chr8g0341751 23.942 969 605 30 343 1263 406 1290 1.27e-49 193
Msa0870610 MtrunA17_Chr8g0341751 30.921 304 192 7 303 596 981 1276 8.14e-32 135
Msa0870610 MtrunA17_Chr8g0341751 25.057 435 263 14 849 1260 255 649 1.38e-23 108
Msa0870610 MtrunA17_Chr8g0366471 65.041 123 43 0 481 603 7 129 8.43e-47 164
Msa0870610 MtrunA17_Chr8g0366471 63.025 119 43 1 1153 1271 20 137 5.38e-42 150
Msa0870610 MtrunA17_Chr8g0374191 92.208 77 6 0 213 289 1 77 4.12e-41 145
Msa0870610 MtrunA17_Chr2g0295911 25.878 541 339 16 735 1249 983 1487 2.01e-37 154
Msa0870610 MtrunA17_Chr2g0295911 25.333 600 372 25 33 597 936 1494 1.95e-34 144
Msa0870610 MtrunA17_Chr2g0295911 28.926 242 149 6 347 586 633 853 7.83e-22 103
Msa0870610 MtrunA17_Chr2g0295911 30.097 206 127 3 1043 1247 666 855 8.32e-20 96.7
Msa0870610 MtrunA17_Chr8g0376961 26.130 509 348 13 112 607 949 1442 8.36e-37 152
Msa0870610 MtrunA17_Chr8g0376961 33.333 243 155 5 1016 1257 1196 1432 4.09e-35 146
Msa0870610 MtrunA17_Chr8g0376961 27.314 443 275 14 818 1245 390 800 4.71e-28 123
Msa0870610 MtrunA17_Chr8g0376961 29.371 286 160 10 321 590 545 804 1.10e-20 99.4
Msa0870610 MtrunA17_Chr2g0295921 35.169 236 144 5 1016 1249 1271 1499 2.81e-36 150
Msa0870610 MtrunA17_Chr2g0295921 32.117 274 166 7 335 597 1242 1506 8.25e-33 139
Msa0870610 MtrunA17_Chr2g0295921 29.339 242 148 6 347 586 645 865 1.36e-23 108
Msa0870610 MtrunA17_Chr2g0295921 29.126 206 129 3 1043 1247 678 867 3.61e-19 94.4
Msa0870610 MtrunA17_Chr2g0295901 26.916 509 307 22 120 597 1017 1491 7.87e-36 148
Msa0870610 MtrunA17_Chr2g0295901 34.335 233 145 4 1016 1246 1256 1482 2.87e-35 147
Msa0870610 MtrunA17_Chr2g0295901 27.832 309 195 11 285 586 566 853 2.39e-22 104
Msa0870610 MtrunA17_Chr2g0295901 29.612 206 128 3 1043 1247 666 855 3.25e-19 94.7
Msa0870610 MtrunA17_Chr2g0333911 25.098 510 342 14 108 597 518 1007 3.27e-35 146
Msa0870610 MtrunA17_Chr2g0333911 34.043 235 148 4 1016 1249 772 1000 3.08e-34 142
Msa0870610 MtrunA17_Chr2g0333911 24.203 533 337 16 375 897 174 649 2.51e-28 124
Msa0870610 MtrunA17_Chr2g0333911 31.513 238 134 10 1034 1264 176 391 1.04e-19 95.9
Msa0870610 MtrunA17_Chr3g0085281 29.577 284 185 4 324 606 1195 1464 4.39e-35 146
Msa0870610 MtrunA17_Chr3g0085281 31.984 247 161 5 1016 1261 1219 1459 8.48e-33 139
Msa0870610 MtrunA17_Chr3g0085281 24.696 575 373 18 693 1245 270 806 4.17e-27 120
Msa0870610 MtrunA17_Chr3g0085281 30.932 236 139 8 386 616 617 833 6.95e-21 100
Msa0870610 MtrunA17_Chr5g0412721 25.094 530 360 13 85 596 969 1479 5.64e-35 145
Msa0870610 MtrunA17_Chr5g0412721 30.638 235 157 4 1016 1249 1244 1473 1.80e-32 137
Msa0870610 MtrunA17_Chr5g0412721 26.905 420 251 11 842 1247 456 833 7.03e-26 116
Msa0870610 MtrunA17_Chr5g0412721 26.974 304 188 8 298 585 545 830 8.01e-22 103
Msa0870610 MtrunA17_Chr8g0363771 26.336 524 329 19 101 597 998 1491 5.91e-35 145
Msa0870610 MtrunA17_Chr8g0363771 34.894 235 146 4 1016 1249 1256 1484 4.51e-34 143
Msa0870610 MtrunA17_Chr8g0363771 28.926 242 149 6 347 586 628 848 1.97e-22 105
Msa0870610 MtrunA17_Chr8g0363771 30.097 206 127 3 1043 1247 661 850 5.63e-20 97.1
Msa0870610 MtrunA17_Chr5g0412941 31.174 247 166 3 359 604 83 326 1.50e-34 135
Msa0870610 MtrunA17_Chr5g0412941 30.041 243 163 5 1016 1257 83 319 8.32e-33 130
Msa0870610 MtrunA17_Chr3g0080981 28.625 538 312 22 769 1264 982 1489 2.52e-34 144
Msa0870610 MtrunA17_Chr3g0080981 28.674 279 182 5 321 597 1205 1468 2.43e-24 111
Msa0870610 MtrunA17_Chr3g0080981 28.959 221 135 6 371 586 626 829 3.69e-23 107
Msa0870610 MtrunA17_Chr3g0080981 21.684 475 315 14 793 1248 396 832 4.31e-20 97.4
Msa0870610 MtrunA17_Chr6g0472531 30.464 302 196 7 311 601 1119 1417 1.56e-33 141
Msa0870610 MtrunA17_Chr6g0472531 29.362 235 160 4 1016 1249 1177 1406 1.19e-29 128
Msa0870610 MtrunA17_Chr6g0472531 29.545 264 165 7 326 585 536 782 6.22e-27 119
Msa0870610 MtrunA17_Chr6g0472531 29.572 257 152 4 1012 1267 565 793 2.97e-24 110
Msa0870610 MtrunA17_Chr6g0463181 29.605 304 190 8 311 597 1150 1446 6.12e-33 139
Msa0870610 MtrunA17_Chr6g0463181 23.614 487 315 13 790 1249 983 1439 4.08e-32 136
Msa0870610 MtrunA17_Chr6g0463181 23.733 434 288 7 827 1245 414 819 3.79e-25 114
Msa0870610 MtrunA17_Chr6g0463181 29.167 264 166 6 326 585 572 818 5.06e-25 113
Msa0870610 MtrunA17_Chr8g0341761 32.131 305 187 8 303 596 1142 1437 7.31e-33 139
Msa0870610 MtrunA17_Chr8g0341761 34.322 236 147 4 1016 1249 1203 1432 9.51e-33 138
Msa0870610 MtrunA17_Chr8g0341761 24.402 418 263 12 849 1247 427 810 1.55e-23 108
Msa0870610 MtrunA17_Chr8g0341761 27.211 294 185 7 343 631 578 847 2.55e-21 101
Msa0870610 MtrunA17_Chr6g0463151 31.102 254 170 4 357 609 1042 1291 7.67e-33 139
Msa0870610 MtrunA17_Chr6g0463151 29.362 235 160 4 1016 1249 1044 1273 1.08e-29 128
Msa0870610 MtrunA17_Chr6g0463151 29.545 264 165 6 326 585 403 649 2.52e-26 117
Msa0870610 MtrunA17_Chr6g0463151 23.918 439 289 9 819 1245 245 650 8.19e-24 109
Msa0870610 MtrunA17_Chr8g0359291 30.547 311 199 8 298 597 340 644 1.24e-32 135
Msa0870610 MtrunA17_Chr8g0359291 23.926 489 311 15 790 1249 181 637 1.51e-32 135
Msa0870610 MtrunA17_Chr6g0463391 31.224 237 154 5 1015 1249 411 640 4.35e-32 134
Msa0870610 MtrunA17_Chr6g0463391 30.147 272 175 5 335 597 382 647 2.12e-30 129
Msa0870610 MtrunA17_Chr6g0463211 31.224 237 154 5 1015 1249 1297 1526 1.87e-31 134
Msa0870610 MtrunA17_Chr6g0463211 29.779 272 176 5 335 597 1268 1533 2.51e-29 127
Msa0870610 MtrunA17_Chr6g0463211 26.168 428 260 9 867 1274 509 900 9.95e-26 115
Msa0870610 MtrunA17_Chr6g0463211 21.827 591 381 19 326 900 623 1148 1.10e-20 99.4
Msa0870610 MtrunA17_Chr1g0202221 24.681 470 296 14 790 1246 935 1359 2.32e-31 134
Msa0870610 MtrunA17_Chr1g0202221 29.310 290 180 6 311 597 1102 1369 1.99e-30 130
Msa0870610 MtrunA17_Chr1g0202221 24.374 439 276 13 823 1245 433 831 2.15e-22 104
Msa0870610 MtrunA17_Chr1g0202221 24.645 422 253 14 226 632 487 858 6.72e-21 100
Msa0870610 MtrunA17_Chr6g0484351 27.037 540 336 20 760 1266 147 661 2.96e-30 128
Msa0870610 MtrunA17_Chr6g0484351 32.131 305 187 8 303 596 349 644 8.65e-28 120
Msa0870610 MtrunA17_Chr5g0445701 32.353 204 132 4 1023 1226 3 200 5.22e-30 120
Msa0870610 MtrunA17_Chr5g0445701 31.308 214 140 2 389 596 23 235 4.30e-29 117
Msa0870610 MtrunA17_Chr8g0393151 36.232 207 118 5 1035 1236 35 232 8.72e-30 119
Msa0870610 MtrunA17_Chr8g0393151 33.659 205 124 4 378 577 35 232 3.95e-26 108
Msa0870610 MtrunA17_Chr8g0341801 31.683 303 191 8 303 596 124 419 2.04e-29 123
Msa0870610 MtrunA17_Chr8g0341801 33.051 236 150 4 1016 1249 185 414 4.30e-29 122
Msa0870610 MtrunA17_Chr3g0101481 29.091 275 182 6 977 1244 1209 1477 2.10e-29 127
Msa0870610 MtrunA17_Chr3g0101481 28.315 279 192 5 332 606 1224 1498 9.53e-29 125
Msa0870610 MtrunA17_Chr3g0101481 26.179 424 251 13 842 1247 459 838 9.59e-26 115
Msa0870610 MtrunA17_Chr3g0101481 28.374 289 182 6 346 626 604 875 8.49e-24 109
Msa0870610 MtrunA17_Chr2g0285231 64.706 85 30 0 504 588 19 103 3.46e-29 112
Msa0870610 MtrunA17_Chr2g0285231 59.756 82 33 0 1163 1244 19 100 1.87e-24 99.0
Msa0870610 MtrunA17_Chr5g0412921 26.891 476 284 17 792 1247 393 824 5.78e-28 122
Msa0870610 MtrunA17_Chr5g0412921 32.212 208 126 3 379 585 628 821 2.17e-21 101
Msa0870610 MtrunA17_Chr7g0249091 34.109 258 132 11 1017 1248 85 330 4.64e-21 96.3
Msa0870610 MtrunA17_Chr7g0249091 31.174 247 121 10 370 582 92 323 1.93e-16 82.4
Msa0870610 MtrunA17_Chr6g0463401 24.760 416 263 11 827 1225 435 817 1.60e-20 98.2
Msa0870610 MtrunA17_Chr6g0463401 25.207 242 163 5 326 566 593 817 3.06e-17 87.8
Msa0870610 MtrunA17_Chr6g0484361 25.888 394 228 15 849 1217 434 788 8.33e-20 95.9
Msa0870610 MtrunA17_Chr6g0484361 29.032 217 135 4 345 558 588 788 2.34e-17 88.2
Msa0870610 MtrunA17_Chr8g0341791 35.294 153 95 3 1096 1247 16 165 1.34e-19 92.4
Msa0870610 MtrunA17_Chr8g0341791 32.000 150 96 3 439 585 16 162 1.70e-17 85.9
Msa0870610 MtrunA17_Chr2g0300791 34.965 143 84 3 671 810 3 139 3.30e-18 83.2
Msa0870610 MtrunA17_Chr1g0202431 34.335 233 127 11 1028 1247 44 263 2.62e-17 87.4
Msa0870610 MtrunA17_Chr1g0202431 29.358 218 139 6 374 584 46 255 1.73e-12 72.0
Msa0870610 MtrunA17_Chr3g0130211 27.953 254 156 8 998 1245 18 250 1.02e-16 81.6
Msa0870610 MtrunA17_Chr3g0130211 26.609 233 142 7 361 584 36 248 1.54e-15 78.2
Msa0870610 MtrunA17_Chr7g0267971 26.355 406 253 16 294 680 79 457 3.63e-16 84.0
Msa0870610 MtrunA17_Chr7g0267971 29.167 216 138 9 1035 1241 160 369 2.16e-13 75.1
Msa0870610 MtrunA17_Chr8g0359931 32.292 192 118 6 1034 1219 65 250 7.47e-16 82.8
Msa0870610 MtrunA17_Chr8g0359931 30.412 194 121 7 375 560 63 250 4.87e-13 73.6
Msa0870610 MtrunA17_Chr1g0176451 32.984 191 116 7 378 560 23 209 1.02e-15 82.0
Msa0870610 MtrunA17_Chr1g0176451 32.407 216 132 10 1035 1241 23 233 2.92e-15 80.9
Msa0870610 MtrunA17_Chr1g0176441 31.390 223 140 8 372 585 165 383 2.37e-15 81.3
Msa0870610 MtrunA17_Chr1g0176441 31.780 236 140 10 1035 1258 171 397 2.47e-15 81.3
Msa0870610 MtrunA17_Chr7g0263351 32.381 210 126 10 1046 1245 138 341 6.93e-14 76.6
Msa0870610 MtrunA17_Chr7g0263351 28.571 217 143 8 377 584 126 339 6.12e-11 67.0
Msa0870610 MtrunA17_Chr8g0384391 28.636 220 140 8 378 587 56 268 7.50e-14 76.3
Msa0870610 MtrunA17_Chr8g0384391 30.435 207 122 10 1050 1245 71 266 7.87e-13 73.2
Msa0870610 MtrunA17_Chr1g0213091 32.536 209 127 9 1046 1245 133 336 8.26e-14 76.3
Msa0870610 MtrunA17_Chr6g0477811 33.962 212 115 10 1044 1241 75 275 8.31e-14 76.3
Msa0870610 MtrunA17_Chr4g0060431 24.194 248 174 9 345 584 580 821 2.62e-13 75.1
Msa0870610 MtrunA17_Chr3g0102731 30.000 210 131 8 1035 1238 98 297 3.67e-13 73.9
Msa0870610 MtrunA17_Chr4g0065231 30.531 226 140 9 1030 1243 69 289 4.19e-13 73.9
Msa0870610 MtrunA17_Chr4g0065231 29.508 244 140 12 363 584 56 289 1.47e-11 68.9
Msa0870610 MtrunA17_Chr1g0200651 28.235 255 164 10 343 586 57 303 4.64e-13 73.9
Msa0870610 MtrunA17_Chr1g0200651 30.244 205 124 10 1045 1238 100 296 2.34e-11 68.2
Msa0870610 MtrunA17_Chr5g0446901 30.660 212 137 7 1035 1238 109 318 5.03e-13 73.6
Msa0870610 MtrunA17_Chr5g0446901 28.846 260 168 9 346 598 83 332 1.21e-11 69.3
Msa0870610 MtrunA17_Chr4g0060501 24.296 284 196 10 374 651 628 898 5.96e-13 73.9
Msa0870610 MtrunA17_Chr1g0198931 27.830 212 141 6 1035 1238 107 314 7.82e-13 73.2
Msa0870610 MtrunA17_Chr8g0349441 28.571 182 110 2 1018 1199 45 206 9.17e-13 68.9
Msa0870610 MtrunA17_Chr8g0349441 26.966 178 112 2 361 538 45 204 4.09e-12 67.0
Msa0870610 MtrunA17_Chr4g0060421 22.957 257 184 7 318 568 88 336 1.06e-12 72.0
Msa0870610 MtrunA17_Chr3g0130331 30.508 236 135 12 383 598 64 290 1.17e-12 72.4
Msa0870610 MtrunA17_Chr4g0060401 24.267 375 233 16 232 584 489 834 1.38e-12 72.8
Msa0870610 MtrunA17_Chr4g0060401 22.414 232 167 6 1027 1253 619 842 2.87e-11 68.2
Msa0870610 MtrunA17_Chr2g0318061 30.052 193 123 6 375 560 28 215 1.92e-12 70.5
Msa0870610 MtrunA17_Chr2g0318061 29.534 193 120 8 1035 1219 31 215 6.70e-12 68.9
Msa0870610 MtrunA17_Chr5g0408061 27.711 249 160 10 1035 1273 65 303 2.60e-12 71.2
Msa0870610 MtrunA17_Chr4g0039261 31.553 206 118 8 1035 1230 51 243 2.97e-12 71.2
Msa0870610 MtrunA17_Chr2g0316301 28.634 227 135 10 1028 1239 66 280 3.54e-12 70.9
Msa0870610 MtrunA17_Chr2g0316301 26.316 228 137 10 371 580 66 280 1.09e-11 69.3
Msa0870610 MtrunA17_Chr5g0411621 31.841 201 126 9 1046 1239 62 258 5.24e-12 70.5
Msa0870610 MtrunA17_Chr5g0411621 31.132 212 133 10 378 580 51 258 1.64e-11 68.9
Msa0870610 MtrunA17_Chr8g0393191 28.980 245 151 9 375 608 66 298 6.50e-12 70.5
Msa0870610 MtrunA17_Chr8g0393191 30.144 209 128 10 1046 1243 80 281 9.17e-11 66.6
Msa0870610 MtrunA17_Chr2g0285211 32.381 105 70 1 289 392 16 120 6.98e-12 63.9
Msa0870610 MtrunA17_Chr7g0257341 29.167 216 141 7 1050 1263 587 792 7.46e-12 70.5
Msa0870610 MtrunA17_Chr4g0060471 23.415 205 147 5 1051 1253 1 197 1.21e-11 67.0
Msa0870610 MtrunA17_Chr8g0371961 34.043 94 59 1 1034 1127 17 107 1.89e-11 62.4
Msa0870610 MtrunA17_Chr4g0050251 31.220 205 115 10 389 579 84 276 1.93e-11 68.6
Msa0870610 MtrunA17_Chr4g0050251 29.412 221 136 6 1035 1242 73 286 4.45e-11 67.4
Msa0870610 MtrunA17_Chr4g0050261 30.102 196 119 5 1035 1219 73 261 2.01e-11 68.6
Msa0870610 MtrunA17_Chr4g0050261 31.188 202 119 10 389 579 84 276 2.47e-11 68.2
Msa0870610 MtrunA17_Chr3g0093091 23.009 226 151 7 345 558 600 814 2.85e-11 68.2
Msa0870610 MtrunA17_Chr4g0039251 30.918 207 126 8 1031 1230 89 285 4.12e-11 67.8
Msa0870610 MtrunA17_Chr4g0050221 30.415 217 139 6 1034 1241 30 243 7.18e-11 66.6
Msa0870610 MtrunA17_Chr1g0208391 27.803 223 130 10 1034 1238 92 301 7.95e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0870610 AT3G28345.1 70.032 1268 339 8 1 1259 1 1236 0.0 1798
Msa0870610 AT3G28415.2 66.081 1253 389 7 16 1260 2 1226 0.0 1717
Msa0870610 AT3G28415.2 35.108 601 378 9 8 602 634 1228 2.36e-105 362
Msa0870610 AT3G28380.1 65.004 1263 413 6 1 1260 1 1237 0.0 1711
Msa0870610 AT3G28380.1 36.634 606 366 8 667 1263 5 601 1.72e-106 365
Msa0870610 AT3G28390.1 66.051 1246 396 7 16 1260 3 1222 0.0 1705
Msa0870610 AT3G28415.1 65.443 1253 389 8 16 1260 2 1218 0.0 1687
Msa0870610 AT3G28415.1 35.108 601 378 9 8 602 626 1220 2.54e-105 362
Msa0870610 AT3G28360.1 65.758 1247 402 8 16 1261 2 1224 0.0 1685
Msa0870610 AT3G28860.1 45.751 1259 661 11 5 1259 8 1248 0.0 1100
Msa0870610 AT3G28860.1 35.935 615 367 7 3 602 649 1251 1.17e-111 380
Msa0870610 AT2G36910.1 43.889 1260 680 12 13 1260 20 1264 0.0 1040
Msa0870610 AT4G25960.1 43.865 1247 658 11 20 1261 61 1270 0.0 1035
Msa0870610 AT1G10680.1 42.480 1250 673 10 13 1261 18 1222 0.0 1033
Msa0870610 AT1G02520.1 42.788 1248 698 9 21 1264 43 1278 0.0 1001
Msa0870610 AT1G02520.2 42.788 1248 698 9 21 1264 43 1278 0.0 1001
Msa0870610 AT1G02520.3 42.788 1248 698 9 21 1264 43 1278 0.0 1001
Msa0870610 AT3G62150.3 42.937 1253 689 8 14 1259 58 1291 0.0 999
Msa0870610 AT3G62150.2 42.937 1253 689 8 14 1259 58 1291 0.0 999
Msa0870610 AT3G62150.1 42.937 1253 689 8 14 1259 58 1291 0.0 999
Msa0870610 AT1G27940.1 42.639 1243 679 12 20 1259 31 1242 0.0 997
Msa0870610 AT2G47000.6 42.903 1247 691 9 21 1259 48 1281 0.0 984
Msa0870610 AT2G47000.6 42.958 568 318 3 36 601 720 1283 4.65e-137 451
Msa0870610 AT2G47000.6 37.012 589 355 8 679 1261 46 624 1.38e-109 375
Msa0870610 AT2G47000.5 42.903 1247 691 9 21 1259 48 1281 0.0 984
Msa0870610 AT2G47000.5 42.958 568 318 3 36 601 720 1283 4.65e-137 451
Msa0870610 AT2G47000.5 37.012 589 355 8 679 1261 46 624 1.38e-109 375
Msa0870610 AT2G47000.1 42.903 1247 691 9 21 1259 48 1281 0.0 984
Msa0870610 AT2G47000.1 42.958 568 318 3 36 601 720 1283 4.65e-137 451
Msa0870610 AT2G47000.1 37.012 589 355 8 679 1261 46 624 1.38e-109 375
Msa0870610 AT1G02530.1 41.838 1262 712 12 14 1264 23 1273 0.0 971
Msa0870610 AT1G10680.2 42.052 1189 644 9 13 1200 18 1162 0.0 969
Msa0870610 AT1G10680.2 36.585 615 371 10 655 1263 4 605 1.64e-109 373
Msa0870610 AT1G28010.1 42.363 1244 682 12 20 1259 32 1244 0.0 967
Msa0870610 AT4G01830.1 41.473 1249 701 7 17 1264 11 1230 0.0 954
Msa0870610 AT5G46540.1 41.374 1252 704 8 20 1263 19 1248 0.0 951
Msa0870610 AT4G01820.1 41.827 1248 700 7 13 1259 2 1224 0.0 937
Msa0870610 AT4G18050.1 42.699 1267 676 13 13 1263 4 1236 0.0 935
Msa0870610 AT4G18050.2 42.722 1264 675 13 15 1263 17 1246 0.0 935
Msa0870610 AT1G27940.2 44.782 1054 550 9 209 1259 4 1028 0.0 890
Msa0870610 AT1G27940.2 35.652 575 360 4 29 599 460 1028 7.83e-109 368
Msa0870610 AT1G27940.2 43.609 399 219 4 862 1259 1 394 6.56e-90 315
Msa0870610 AT2G47000.2 40.600 1133 653 8 21 1145 48 1168 0.0 831
Msa0870610 AT2G47000.2 37.012 589 355 8 679 1261 46 624 5.34e-110 374
Msa0870610 AT2G47000.2 36.784 454 281 3 36 487 720 1169 1.11e-79 286
Msa0870610 AT4G01830.2 42.955 1022 556 5 244 1264 1 996 0.0 810
Msa0870610 AT4G01830.2 40.806 571 314 7 40 599 434 991 2.34e-128 421
Msa0870610 AT2G47000.4 39.227 1035 610 7 21 1047 48 1071 0.0 726
Msa0870610 AT2G47000.4 37.012 589 355 8 679 1261 46 624 2.51e-110 374
Msa0870610 AT2G47000.3 39.112 946 557 7 21 958 48 982 0.0 672
Msa0870610 AT2G47000.3 37.012 589 355 8 679 1261 46 624 2.87e-111 374
Msa0870610 AT2G47000.7 39.112 946 557 7 21 958 48 982 0.0 672
Msa0870610 AT2G47000.7 37.012 589 355 8 679 1261 46 624 2.87e-111 374
Msa0870610 AT1G02530.2 38.389 956 569 10 14 959 23 968 0.0 659
Msa0870610 AT1G02530.2 36.651 633 359 12 662 1270 10 624 1.39e-109 369
Msa0870610 AT4G01820.2 38.186 948 561 6 13 959 2 925 0.0 644
Msa0870610 AT4G01820.2 39.518 539 313 8 740 1274 73 602 8.80e-105 355
Msa0870610 AT2G39480.1 40.823 583 332 7 21 597 71 646 6.65e-130 434
Msa0870610 AT2G39480.1 35.714 700 404 12 571 1256 726 1393 2.20e-128 430
Msa0870610 AT2G39480.1 34.495 574 370 4 32 603 831 1400 4.37e-99 347
Msa0870610 AT2G39480.1 30.981 581 378 7 679 1247 69 638 3.23e-77 281
Msa0870610 AT2G39480.2 35.571 700 405 11 571 1256 546 1213 8.57e-130 430
Msa0870610 AT2G39480.2 42.887 471 263 5 128 597 1 466 2.12e-109 374
Msa0870610 AT2G39480.2 34.495 574 370 4 32 603 651 1220 4.98e-100 347
Msa0870610 AT2G39480.2 34.328 469 292 5 784 1247 1 458 4.71e-75 273
Msa0870610 AT3G55320.1 40.103 581 339 6 21 597 73 648 3.01e-126 424
Msa0870610 AT3G55320.1 38.436 601 356 7 662 1256 802 1394 3.98e-126 424
Msa0870610 AT3G55320.1 34.331 568 367 4 32 597 832 1395 1.17e-95 337
Msa0870610 AT3G55320.1 30.936 598 393 9 674 1259 61 650 2.28e-79 288
Msa0870610 AT5G39040.1 37.917 509 306 8 95 599 132 634 1.68e-100 334
Msa0870610 AT5G39040.1 35.824 522 303 7 751 1259 132 634 9.16e-88 299
Msa0870610 AT1G70610.2 34.871 542 302 14 734 1259 8 514 2.75e-82 280
Msa0870610 AT1G70610.2 35.039 508 286 10 114 599 29 514 3.76e-81 276
Msa0870610 AT1G70610.1 35.161 529 311 11 745 1259 185 695 9.13e-80 278
Msa0870610 AT1G70610.1 35.167 509 284 10 114 599 210 695 2.55e-79 276
Msa0870610 AT4G25450.3 33.766 539 299 9 771 1260 12 541 1.76e-79 273
Msa0870610 AT4G25450.3 34.066 546 296 13 109 600 6 541 3.74e-65 231
Msa0870610 AT4G25450.1 33.766 539 299 9 771 1260 181 710 1.91e-77 271
Msa0870610 AT4G25450.1 33.826 541 304 13 109 600 175 710 2.18e-63 231
Msa0870610 AT1G30400.2 26.258 914 572 30 368 1249 621 1464 2.07e-62 235
Msa0870610 AT1G30400.2 29.855 345 205 9 358 675 1234 1568 3.66e-26 117
Msa0870610 AT1G30400.2 30.531 226 141 5 1024 1248 620 830 1.34e-23 109
Msa0870610 AT1G30400.1 26.258 914 572 30 368 1249 621 1464 2.07e-62 235
Msa0870610 AT1G30400.1 29.855 345 205 9 358 675 1234 1568 3.66e-26 117
Msa0870610 AT1G30400.1 30.531 226 141 5 1024 1248 620 830 1.34e-23 109
Msa0870610 AT5G58270.1 32.707 532 308 13 749 1259 212 714 2.41e-62 228
Msa0870610 AT5G58270.1 48.899 227 114 1 359 585 477 701 1.55e-57 213
Msa0870610 AT4G28620.1 35.652 460 256 12 810 1259 245 674 1.35e-61 224
Msa0870610 AT4G28620.1 39.244 344 171 11 247 585 351 661 2.92e-56 209
Msa0870610 AT1G30410.5 24.205 975 636 28 327 1265 469 1376 1.47e-60 228
Msa0870610 AT4G28630.1 34.711 484 277 13 794 1259 210 672 1.70e-60 221
Msa0870610 AT4G28630.1 30.146 617 369 17 5 586 71 660 4.04e-57 211
Msa0870610 AT1G30410.1 24.205 975 636 28 327 1265 587 1494 3.26e-60 228
Msa0870610 AT1G30410.2 24.205 975 636 28 327 1265 584 1491 3.64e-60 228
Msa0870610 AT1G30410.6 24.205 975 636 28 327 1265 584 1491 3.64e-60 228
Msa0870610 AT1G30410.4 24.205 975 636 28 327 1265 584 1491 3.64e-60 228
Msa0870610 AT2G34660.3 26.477 914 567 32 368 1245 334 1178 5.29e-60 227
Msa0870610 AT2G34660.3 25.838 507 336 17 112 597 702 1189 1.53e-28 125
Msa0870610 AT2G34660.3 29.515 227 142 5 1024 1248 333 543 2.46e-22 105
Msa0870610 AT2G34660.1 26.477 914 567 32 368 1245 621 1465 6.05e-60 227
Msa0870610 AT2G34660.1 25.838 507 336 17 112 597 989 1476 1.71e-28 125
Msa0870610 AT2G34660.1 29.515 227 142 5 1024 1248 620 830 2.16e-22 105
Msa0870610 AT2G34660.2 26.477 914 567 32 368 1245 621 1465 6.05e-60 227
Msa0870610 AT2G34660.2 25.838 507 336 17 112 597 989 1476 1.71e-28 125
Msa0870610 AT2G34660.2 29.515 227 142 5 1024 1248 620 830 2.16e-22 105
Msa0870610 AT1G04120.1 26.007 919 599 29 370 1257 634 1502 2.89e-58 221
Msa0870610 AT1G04120.1 24.587 545 371 11 79 603 984 1508 1.26e-31 135
Msa0870610 AT1G04120.1 25.123 609 376 21 669 1247 278 836 1.43e-27 122
Msa0870610 AT1G04120.3 26.007 919 599 29 370 1257 599 1467 3.82e-58 221
Msa0870610 AT1G04120.3 24.954 541 374 13 79 603 949 1473 9.54e-32 135
Msa0870610 AT1G04120.3 24.628 605 349 20 669 1247 278 801 9.15e-27 119
Msa0870610 AT3G60160.1 25.539 928 577 26 361 1249 630 1482 1.47e-57 219
Msa0870610 AT3G60160.1 25.490 510 354 13 108 605 1002 1497 7.11e-34 142
Msa0870610 AT3G60160.1 23.550 569 384 15 693 1246 311 843 1.02e-23 109
Msa0870610 AT3G60160.3 25.539 928 577 26 361 1249 594 1446 2.51e-57 218
Msa0870610 AT3G60160.3 25.490 510 354 13 108 605 966 1461 9.01e-34 142
Msa0870610 AT3G60160.3 23.550 569 384 15 693 1246 275 807 1.28e-23 109
Msa0870610 AT3G59140.1 23.655 892 557 26 379 1236 620 1421 1.03e-55 213
Msa0870610 AT3G59140.1 28.025 314 215 6 298 607 1145 1451 5.48e-35 146
Msa0870610 AT3G59140.1 25.058 431 275 11 845 1260 430 827 5.88e-25 113
Msa0870610 AT2G47800.1 23.608 970 595 29 343 1249 614 1500 1.10e-55 213
Msa0870610 AT2G47800.1 32.886 298 183 8 312 597 1215 1507 2.84e-28 124
Msa0870610 AT1G04120.2 24.811 927 595 25 370 1257 634 1497 1.52e-55 213
Msa0870610 AT1G04120.2 24.220 545 368 13 79 603 984 1503 1.50e-29 128
Msa0870610 AT1G04120.2 25.123 609 376 21 669 1247 278 836 1.62e-27 122
Msa0870610 AT5G03910.1 44.245 278 146 5 971 1245 350 621 1.45e-54 202
Msa0870610 AT5G03910.1 43.173 271 144 4 331 594 363 630 4.71e-48 183
Msa0870610 AT3G62700.1 23.391 979 596 31 346 1246 619 1521 1.16e-53 207
Msa0870610 AT3G62700.1 31.250 304 195 7 302 597 1233 1530 2.24e-26 118
Msa0870610 AT3G62700.1 28.139 231 149 3 1018 1247 639 853 2.57e-21 102
Msa0870610 AT3G13090.1 24.351 924 576 27 361 1244 601 1441 2.31e-51 199
Msa0870610 AT3G13090.1 24.859 531 361 12 84 596 942 1452 9.81e-33 139
Msa0870610 AT3G13090.1 23.640 478 302 15 792 1247 379 815 1.38e-17 89.7
Msa0870610 AT2G07680.6 23.906 891 573 24 384 1249 507 1317 1.93e-50 196
Msa0870610 AT2G07680.6 35.246 244 149 4 357 597 1087 1324 5.50e-34 143
Msa0870610 AT2G07680.6 24.590 427 275 11 824 1239 301 691 9.18e-23 106
Msa0870610 AT2G07680.3 23.906 891 573 24 384 1249 606 1416 2.03e-50 196
Msa0870610 AT2G07680.3 35.246 244 149 4 357 597 1186 1423 4.38e-34 143
Msa0870610 AT2G07680.3 24.590 427 275 11 824 1239 400 790 8.45e-23 106
Msa0870610 AT2G07680.1 23.457 891 577 25 384 1249 584 1394 5.61e-50 194
Msa0870610 AT2G07680.1 35.246 244 149 4 357 597 1164 1401 4.79e-34 143
Msa0870610 AT2G07680.1 24.590 427 275 11 824 1239 378 768 9.21e-23 106
Msa0870610 AT5G39040.2 31.926 379 249 7 99 473 136 509 6.10e-50 186
Msa0870610 AT5G39040.2 28.101 395 254 6 751 1132 132 509 2.55e-37 149
Msa0870610 AT2G07680.4 23.457 891 577 25 384 1249 581 1391 6.30e-50 194
Msa0870610 AT2G07680.4 35.246 244 149 4 357 597 1161 1398 4.99e-34 143
Msa0870610 AT2G07680.4 24.590 427 275 11 824 1239 375 765 9.52e-23 106
Msa0870610 AT2G07680.5 23.906 891 573 24 384 1249 590 1400 6.76e-50 194
Msa0870610 AT2G07680.5 35.246 244 149 4 357 597 1170 1407 5.06e-34 143
Msa0870610 AT2G07680.5 24.590 427 275 11 824 1239 384 774 9.31e-23 106
Msa0870610 AT4G25450.2 28.604 444 261 8 771 1165 181 617 2.12e-43 169
Msa0870610 AT4G25450.2 29.530 447 262 12 109 506 175 617 6.96e-33 137
Msa0870610 AT1G30410.3 22.668 847 563 26 327 1149 584 1362 1.69e-41 167
Msa0870610 AT1G30410.3 29.386 228 139 6 1024 1247 621 830 2.58e-18 92.0
Msa0870610 AT3G60160.2 24.621 792 488 24 361 1114 630 1350 1.32e-37 154
Msa0870610 AT3G60160.2 24.561 570 377 18 693 1246 311 843 1.23e-23 109
Msa0870610 AT3G60160.2 24.033 362 250 12 108 457 1002 1350 1.11e-12 73.6
Msa0870610 AT1G30420.1 26.981 530 333 18 769 1265 983 1491 1.63e-36 151
Msa0870610 AT1G30420.1 25.472 530 360 16 95 605 964 1477 5.70e-26 117
Msa0870610 AT1G30420.1 26.948 308 190 8 299 587 538 829 2.30e-23 108
Msa0870610 AT1G30420.1 23.368 475 304 18 793 1247 396 830 2.65e-18 92.0
Msa0870610 AT3G21250.2 34.387 253 155 5 1004 1254 1201 1444 2.56e-35 147
Msa0870610 AT3G21250.2 33.884 242 151 5 358 596 1212 1447 4.34e-31 133
Msa0870610 AT3G21250.2 25.059 423 276 10 861 1272 443 835 6.42e-23 107
Msa0870610 AT3G21250.2 26.250 240 149 6 373 607 608 824 7.84e-18 90.5
Msa0870610 AT3G21250.4 34.387 253 155 5 1004 1254 1207 1450 2.59e-35 147
Msa0870610 AT3G21250.4 33.884 242 151 5 358 596 1218 1453 4.54e-31 133
Msa0870610 AT3G21250.4 25.059 423 276 10 861 1272 449 841 7.55e-23 107
Msa0870610 AT3G21250.4 26.250 240 149 6 373 607 614 830 7.99e-18 90.5
Msa0870610 AT3G21250.5 34.387 253 155 5 1004 1254 1196 1439 2.78e-35 147
Msa0870610 AT3G21250.5 33.884 242 151 5 358 596 1207 1442 4.87e-31 133
Msa0870610 AT3G21250.5 24.586 423 267 11 861 1272 449 830 1.04e-19 96.7
Msa0870610 AT3G21250.5 25.417 240 140 7 373 607 614 819 1.14e-14 80.1
Msa0870610 AT3G21250.1 34.387 253 155 5 1004 1254 1190 1433 2.92e-35 147
Msa0870610 AT3G21250.1 33.884 242 151 5 358 596 1201 1436 5.20e-31 133
Msa0870610 AT3G21250.1 24.586 423 267 11 861 1272 443 824 1.14e-19 96.7
Msa0870610 AT3G21250.1 25.417 240 140 7 373 607 608 813 1.17e-14 80.1
Msa0870610 AT3G21250.6 34.387 253 155 5 1004 1254 785 1028 3.24e-35 146
Msa0870610 AT3G21250.6 33.884 242 151 5 358 596 796 1031 6.29e-31 132
Msa0870610 AT3G21250.6 28.800 250 159 4 1024 1272 188 419 4.30e-21 100
Msa0870610 AT3G21250.6 27.064 218 138 5 373 585 192 393 1.06e-17 89.7
Msa0870610 AT3G21250.3 34.387 253 155 5 1004 1254 785 1028 3.24e-35 146
Msa0870610 AT3G21250.3 33.884 242 151 5 358 596 796 1031 6.29e-31 132
Msa0870610 AT3G21250.3 28.800 250 159 4 1024 1272 188 419 4.30e-21 100
Msa0870610 AT3G21250.3 27.064 218 138 5 373 585 192 393 1.06e-17 89.7
Msa0870610 AT3G60970.1 24.655 507 362 10 108 605 549 1044 6.56e-33 139
Msa0870610 AT3G60970.1 25.202 496 326 14 774 1249 559 1029 4.54e-32 136
Msa0870610 AT3G60970.1 26.392 413 272 9 841 1246 40 427 4.12e-27 120
Msa0870610 AT3G60970.1 35.021 237 126 6 364 588 208 428 4.41e-27 120
Msa0870610 AT3G13100.2 24.044 549 340 16 739 1257 729 1230 1.10e-32 138
Msa0870610 AT3G13100.2 29.787 282 183 5 332 601 965 1243 4.39e-31 133
Msa0870610 AT3G13100.2 24.587 484 300 18 787 1247 152 593 1.54e-17 89.4
Msa0870610 AT3G13100.2 27.706 231 148 4 360 587 378 592 3.24e-17 88.2
Msa0870610 AT3G13100.1 32.157 255 160 5 1007 1257 1230 1475 1.13e-32 139
Msa0870610 AT3G13100.1 29.787 282 183 5 332 601 1210 1488 3.16e-31 134
Msa0870610 AT3G13100.1 24.587 484 300 18 787 1247 397 838 9.84e-18 90.1
Msa0870610 AT3G13100.1 27.706 231 148 4 360 587 623 837 1.78e-17 89.4
Msa0870610 AT3G13080.1 24.022 537 382 12 84 608 992 1514 1.18e-31 135
Msa0870610 AT3G13080.1 31.707 246 155 5 1016 1257 1267 1503 4.67e-31 133
Msa0870610 AT3G13080.1 31.579 152 100 2 1097 1247 706 854 1.23e-17 89.7
Msa0870610 AT3G13080.1 31.544 149 96 3 442 587 708 853 2.01e-16 85.9
Msa0870610 AT1G67940.1 34.783 207 120 4 1035 1236 44 240 1.04e-30 122
Msa0870610 AT1G67940.1 33.981 206 125 6 376 577 42 240 3.06e-26 110
Msa0870610 AT3G13080.5 32.127 221 138 4 1016 1232 1267 1479 4.94e-30 130
Msa0870610 AT3G13080.5 24.254 503 355 12 84 574 992 1480 5.74e-29 127
Msa0870610 AT3G13080.5 31.579 152 100 2 1097 1247 706 854 1.18e-17 89.7
Msa0870610 AT3G13080.5 31.544 149 96 3 442 587 708 853 1.75e-16 85.9
Msa0870610 AT3G13080.2 22.719 537 364 12 84 608 992 1489 4.29e-24 110
Msa0870610 AT3G13080.2 28.807 243 141 5 1016 1257 1267 1478 1.78e-21 102
Msa0870610 AT3G13080.2 31.579 152 100 2 1097 1247 706 854 1.22e-17 89.7
Msa0870610 AT3G13080.2 31.544 149 96 3 442 587 708 853 1.87e-16 85.9
Msa0870610 AT1G30420.2 28.626 262 170 6 327 587 584 829 1.65e-23 108
Msa0870610 AT1G30420.2 23.368 475 304 18 793 1247 396 830 4.26e-18 91.3
Msa0870610 AT2G07680.2 25.349 430 268 14 824 1239 400 790 6.83e-23 106
Msa0870610 AT2G07680.2 32.057 209 120 5 384 587 606 797 3.72e-19 94.7
Msa0870610 AT1G65410.1 32.171 258 137 11 1017 1248 84 329 2.25e-19 91.7
Msa0870610 AT1G65410.1 30.328 244 127 10 370 582 91 322 5.74e-16 81.6
Msa0870610 AT3G13080.3 31.579 152 100 2 1097 1247 706 854 6.92e-18 90.5
Msa0870610 AT3G13080.3 31.544 149 96 3 442 587 708 853 1.27e-16 86.3
Msa0870610 AT3G13080.4 31.579 152 100 2 1097 1247 706 854 6.92e-18 90.5
Msa0870610 AT3G13080.4 31.544 149 96 3 442 587 708 853 1.27e-16 86.3
Msa0870610 AT5G06530.2 31.716 268 164 10 303 560 106 364 5.26e-16 84.0
Msa0870610 AT5G06530.2 31.278 227 125 11 1035 1244 179 391 9.83e-14 76.6
Msa0870610 AT5G06530.1 31.716 268 164 10 303 560 106 364 5.26e-16 84.0
Msa0870610 AT5G06530.1 31.278 227 125 11 1035 1244 179 391 9.83e-14 76.6
Msa0870610 AT5G06530.3 31.716 268 164 10 303 560 106 364 8.76e-16 83.2
Msa0870610 AT5G06530.3 31.278 227 125 11 1035 1244 179 391 1.42e-13 75.9
Msa0870610 AT3G25620.2 29.279 222 135 9 1029 1238 93 304 1.36e-14 79.3
Msa0870610 AT4G33460.1 27.315 216 118 7 378 579 59 249 1.85e-14 75.9
Msa0870610 AT4G33460.1 28.333 240 133 9 1018 1243 40 254 5.20e-14 74.3
Msa0870610 AT3G25620.1 29.279 222 135 9 1029 1238 93 304 3.06e-14 77.4
Msa0870610 AT3G55090.1 31.754 211 126 9 1046 1245 118 321 6.05e-14 77.4
Msa0870610 AT3G55090.1 29.358 218 138 8 378 584 107 319 5.50e-11 67.8
Msa0870610 AT1G17840.1 33.641 217 127 9 1035 1241 69 278 6.63e-14 77.0
Msa0870610 AT1G53270.1 27.706 231 140 9 373 587 45 264 7.44e-14 76.6
Msa0870610 AT1G53270.1 28.444 225 140 8 1034 1246 49 264 8.76e-12 70.1
Msa0870610 AT2G37360.1 30.909 220 136 10 1034 1243 132 345 7.77e-14 77.0
Msa0870610 AT2G37360.1 30.270 185 120 6 377 555 132 313 5.40e-11 67.8
Msa0870610 AT2G39350.1 30.342 234 144 10 1022 1243 95 321 8.70e-14 76.6
Msa0870610 AT2G39350.1 28.879 232 148 9 367 586 97 323 4.42e-12 71.2
Msa0870610 AT3G55110.1 29.665 209 134 7 378 579 91 293 1.06e-13 76.3
Msa0870610 AT3G55110.1 33.014 209 127 10 1046 1245 102 306 4.26e-13 74.3
Msa0870610 AT3G55100.1 29.707 239 140 11 1021 1243 37 263 1.14e-13 76.3
Msa0870610 AT3G55100.1 28.947 228 150 7 366 584 39 263 3.93e-13 74.3
Msa0870610 AT3G55100.2 29.707 239 140 11 1021 1243 37 263 1.14e-13 76.3
Msa0870610 AT3G55100.2 28.947 228 150 7 366 584 39 263 3.93e-13 74.3
Msa0870610 AT1G71330.1 31.250 128 84 2 1121 1247 2 126 1.17e-13 74.3
Msa0870610 AT1G71330.1 30.579 121 80 2 466 585 6 123 7.16e-13 71.6
Msa0870610 AT4G25750.1 27.755 245 147 9 1022 1247 10 243 1.26e-13 75.9
Msa0870610 AT4G25750.1 29.204 226 138 8 366 580 11 225 1.08e-12 72.8
Msa0870610 AT4G27420.1 27.823 248 155 10 1035 1268 66 303 2.63e-13 75.1
Msa0870610 AT1G51500.1 32.258 217 111 12 1031 1230 40 237 2.86e-13 75.1
Msa0870610 AT1G51500.1 31.674 221 121 12 374 579 40 245 4.04e-11 68.2
Msa0870610 AT3G47760.3 24.590 244 170 9 349 584 601 838 3.24e-13 75.1
Msa0870610 AT3G21090.1 31.905 210 120 9 1031 1230 41 237 3.26e-13 74.7
Msa0870610 AT3G21090.1 33.171 205 108 12 389 579 56 245 3.36e-11 68.2
Msa0870610 AT5G19410.1 31.169 231 124 11 1035 1243 66 283 3.50e-13 74.7
Msa0870610 AT5G19410.1 29.412 221 139 7 378 584 66 283 2.32e-12 72.0
Msa0870610 AT5G19410.2 31.169 231 124 11 1035 1243 75 292 3.58e-13 74.7
Msa0870610 AT5G19410.2 29.412 221 139 7 378 584 75 292 2.33e-12 72.0
Msa0870610 AT5G61700.1 27.027 222 142 9 350 558 578 792 3.86e-13 74.7
Msa0870610 AT5G61700.1 23.684 228 157 7 1027 1246 604 822 1.97e-12 72.4
Msa0870610 AT3G47760.1 24.583 240 167 9 353 584 565 798 3.88e-13 74.7
Msa0870610 AT3G47760.2 24.583 240 167 9 353 584 575 808 4.32e-13 74.7
Msa0870610 AT2G13610.1 26.047 215 140 8 1035 1239 62 267 5.17e-13 73.9
Msa0870610 AT2G13610.1 27.778 216 141 8 378 584 62 271 8.97e-12 70.1
Msa0870610 AT3G47780.1 25.221 226 146 9 345 558 596 810 1.13e-12 73.2
Msa0870610 AT5G52860.1 29.464 224 141 8 1027 1243 35 248 1.22e-12 72.8
Msa0870610 AT5G52860.1 28.623 276 166 9 372 625 38 304 2.19e-12 72.0
Msa0870610 AT1G31770.1 28.279 244 155 10 1035 1268 81 314 1.34e-12 72.8
Msa0870610 AT1G31770.1 27.753 227 148 8 375 591 78 298 9.51e-12 70.1
Msa0870610 AT3G13220.1 31.718 227 137 12 1035 1254 106 321 1.52e-12 72.8
Msa0870610 AT5G61700.2 28.378 222 135 10 350 554 578 792 1.68e-12 72.8
Msa0870610 AT5G61700.2 25.121 207 137 8 1027 1224 604 801 2.95e-11 68.6
Msa0870610 AT5G61700.4 28.378 222 135 10 350 554 578 792 1.68e-12 72.8
Msa0870610 AT5G61700.4 25.121 207 137 8 1027 1224 604 801 2.95e-11 68.6
Msa0870610 AT5G61740.2 25.221 226 141 9 350 558 536 750 1.93e-12 72.4
Msa0870610 AT5G61740.1 25.221 226 141 9 350 558 570 784 2.18e-12 72.4
Msa0870610 AT2G01320.7 28.571 224 125 11 1035 1238 90 298 2.60e-12 71.6
Msa0870610 AT2G01320.6 28.571 224 125 11 1035 1238 90 298 2.60e-12 71.6
Msa0870610 AT3G53510.1 30.455 220 137 10 1034 1243 125 338 2.69e-12 72.0
Msa0870610 AT2G01320.8 28.444 225 126 11 1034 1238 89 298 2.89e-12 71.6
Msa0870610 AT2G01320.5 28.444 225 126 11 1034 1238 89 298 2.89e-12 71.6
Msa0870610 AT5G61740.3 25.221 226 141 9 350 558 431 645 3.20e-12 71.6
Msa0870610 AT3G55130.1 30.918 207 130 9 1046 1243 110 312 3.77e-12 71.2
Msa0870610 AT3G55130.1 28.704 216 143 8 378 584 99 312 1.47e-11 69.7
Msa0870610 AT5G06530.4 33.714 175 101 7 395 560 1 169 4.04e-12 70.9
Msa0870610 AT5G06530.4 30.952 210 114 11 1052 1244 1 196 5.13e-11 67.4
Msa0870610 AT2G01320.2 28.444 225 126 11 1034 1238 89 298 4.18e-12 71.2
Msa0870610 AT2G01320.1 28.444 225 126 11 1034 1238 89 298 4.43e-12 71.2
Msa0870610 AT2G01320.4 28.444 225 126 11 1034 1238 89 298 4.43e-12 71.2
Msa0870610 AT2G01320.3 28.444 225 126 11 1034 1238 89 298 4.76e-12 71.2
Msa0870610 AT2G41700.1 22.581 248 157 10 1031 1265 1470 1695 5.42e-12 71.2
Msa0870610 AT2G41700.1 26.506 249 170 8 1018 1263 549 787 7.66e-12 70.9
Msa0870610 AT2G41700.2 25.296 253 168 7 1018 1263 479 717 7.96e-12 70.9
Msa0870610 AT2G41700.2 22.707 229 147 9 1031 1246 1428 1639 3.26e-11 68.9
Msa0870610 AT3G47750.1 23.556 225 153 6 370 584 624 839 1.64e-11 69.7
Msa0870610 AT1G51460.1 33.702 181 97 7 1050 1218 45 214 4.79e-11 67.8
Msa0870610 AT5G61690.2 26.697 221 146 7 393 606 562 773 8.22e-11 67.4

Find 242 sgRNAs with CRISPR-Local

Find 430 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTAAGATCACACTTTC+TGG 0.163969 6_1:+5137041 None:intergenic
CTACTTGGGCTTTGGACTTT+TGG 0.172929 6_1:-5134011 Msa0870610:CDS
TAACCCTTTCTAAAGCATTT+TGG 0.178707 6_1:+5133221 None:intergenic
CCGCAATAATATCAGCATTT+TGG 0.180583 6_1:+5135793 None:intergenic
CAATTGCAATTCTTTGCTTT+TGG 0.199400 6_1:+5135967 None:intergenic
AAATAAAATTGAGGAGGTTT+AGG 0.222509 6_1:-5132898 Msa0870610:three_prime_UTR
AAAGATTGATTCTGAAAATA+TGG 0.231412 6_1:-5137135 Msa0870610:CDS
TTGTGATTTGATTGCTGTTT+TGG 0.232267 6_1:-5133146 Msa0870610:CDS
GGCTCCCACCTTGAAAATAA+TGG 0.246909 6_1:-5132696 Msa0870610:three_prime_UTR
TTGAGGAGGTTTAGGGAAAT+TGG 0.252914 6_1:-5132890 Msa0870610:three_prime_UTR
ACATACCACATTGGCATCTT+TGG 0.262089 6_1:+5135071 None:intergenic
CAGCTTTGTCTAGAGCTTCT+TGG 0.264753 6_1:+5135862 None:intergenic
AATAAAATTGAGGAGGTTTA+GGG 0.266587 6_1:-5132897 Msa0870610:three_prime_UTR
CAATTATTCTACTTGGGCTT+TGG 0.270759 6_1:-5134019 Msa0870610:CDS
ATGAGATCAAGAAGCAAATT+AGG 0.271355 6_1:-5135290 Msa0870610:CDS
AGCATCTGCATGCATGAAAA+TGG 0.282068 6_1:+5139689 None:intergenic
AACTCTATTGGTAGTGCTTC+TGG 0.283742 6_1:-5139573 Msa0870610:CDS
CAGTCTTGGTTTGCAGGTAT+TGG 0.292252 6_1:-5134063 Msa0870610:CDS
TGGTCTTTGATATCCTATTA+TGG 0.298351 6_1:-5137985 Msa0870610:CDS
GAATCCAGAGGTGTTGCTTT+TGG 0.298820 6_1:-5133287 Msa0870610:CDS
CTTATAATCTAAGGTCATTA+AGG 0.300717 6_1:-5133555 Msa0870610:CDS
GAATCAGAAATTAAATTGTT+TGG 0.310154 6_1:+5133028 None:intergenic
AGAACGGTTTATTCCTTTGC+AGG 0.311163 6_1:-5138126 Msa0870610:CDS
TAGCAGCATTTGCATTGTTA+TGG 0.312542 6_1:-5138296 Msa0870610:CDS
AGATTCTACGATCCACTTAA+AGG 0.314986 6_1:-5133610 Msa0870610:CDS
AGTCTTGGTTTGCAGGTATT+GGG 0.321657 6_1:-5134062 Msa0870610:CDS
CTTCCACTCTAGCCCATTCA+TGG 0.325496 6_1:+5135416 None:intergenic
CCTTGAAAATAATGGGAGTT+AGG 0.329143 6_1:-5132688 Msa0870610:three_prime_UTR
ATCATATATGATTAAAATCT+TGG 0.329543 6_1:-5132717 Msa0870610:three_prime_UTR
ATTAGACAGTCTTGGTTTGC+AGG 0.331678 6_1:-5134069 Msa0870610:CDS
ATCACACTTTCTGGTCTTGA+TGG 0.331978 6_1:+5137050 None:intergenic
ATTATTGCGGTCGTTCAAAA+TGG 0.333222 6_1:-5135780 Msa0870610:CDS
TTTCAAGACTCGGGCCTTGT+TGG 0.335921 6_1:+5134094 None:intergenic
CCTTTGTTGTTGTTTATTGC+AGG 0.341957 6_1:-5139606 Msa0870610:CDS
GACCATTCTGCTACCATAAT+AGG 0.342415 6_1:+5137972 None:intergenic
ACACTGATCTTGAGCCTTGA+TGG 0.344325 6_1:+5134206 None:intergenic
TCCTTATGAGACAGGGCTTT+CGG 0.344767 6_1:-5137239 Msa0870610:intron
CGAAGGTTGTTGGCCATGAA+TGG 0.346410 6_1:-5135429 Msa0870610:CDS
AACTGCTTTCTCTAATGCTT+TGG 0.347293 6_1:-5138088 Msa0870610:CDS
AGAGTGGAAGCAAGCATGTT+TGG 0.349219 6_1:-5135403 Msa0870610:CDS
TTGGTAGGGGAAAGTGGTTC+TGG 0.357132 6_1:-5133661 Msa0870610:CDS
ATTTGCATTGTTATGGAGAT+TGG 0.362717 6_1:-5138289 Msa0870610:CDS
CATTCATCTTTGTTGTCAAA+AGG 0.363596 6_1:-5133094 Msa0870610:CDS
TCTGATCAGCACCACCCATT+TGG 0.371343 6_1:+5139760 None:intergenic
GTGATTCCTGGTTTCATGTA+TGG 0.371566 6_1:-5138234 Msa0870610:CDS
TTGGTAGTACTAGTGATTCC+TGG 0.372350 6_1:-5138246 Msa0870610:CDS
AAAGTGGCTTAGGTCTCAAA+TGG 0.378288 6_1:-5136865 Msa0870610:CDS
GGTGGAGAGATTCTTCTTGA+TGG 0.379445 6_1:-5136912 Msa0870610:CDS
TCTGGAAAATCAACAATCAT+AGG 0.383068 6_1:-5133643 Msa0870610:CDS
TTCAAGACTCGGGCCTTGTT+GGG 0.385604 6_1:+5134095 None:intergenic
TTTGTTTGCAACAAGTATTA+AGG 0.386511 6_1:-5136820 Msa0870610:CDS
TGAAATTCCAACTGAATAAA+CGG 0.387984 6_1:+5137924 None:intergenic
CAAGAACCAACATTGTTTAG+TGG 0.394284 6_1:-5133511 Msa0870610:CDS
ACATAAAGACTTATAATCTA+AGG 0.395545 6_1:-5133564 Msa0870610:CDS
ACATTATAGCTTTGCTTACA+TGG 0.396877 6_1:-5135208 Msa0870610:CDS
TGATCTCCATTCATGATAGA+TGG 0.397371 6_1:+5135648 None:intergenic
AGCATTAGAGAAAGCAGTTA+TGG 0.398632 6_1:+5138092 None:intergenic
ATCAAATGTGAAGTACTTCT+CGG 0.399701 6_1:-5137207 Msa0870610:CDS
TTAGTAGGAGGAAGTGGTTC+AGG 0.400294 6_1:-5136981 Msa0870610:CDS
CATGTATGGAAGAATTTCAA+TGG 0.403473 6_1:-5138220 Msa0870610:CDS
GAGTGGAAGCAAGCATGTTT+GGG 0.405917 6_1:-5135402 Msa0870610:CDS
AAATGCTTTAGAAAGGGTTA+TGG 0.406140 6_1:-5133218 Msa0870610:CDS
ATCATTGGTGGGTGATAGAT+TGG 0.406891 6_1:-5134385 Msa0870610:CDS
ATCATAAGTACAATAAGAAA+AGG 0.416360 6_1:-5135476 Msa0870610:CDS
GCTCCCACCTTGAAAATAAT+GGG 0.422862 6_1:-5132695 Msa0870610:three_prime_UTR
AGGGTTGGCTGTTATCTCAA+TGG 0.423204 6_1:-5135247 Msa0870610:CDS
ATAAGGGAAAATATTGCATA+TGG 0.423678 6_1:-5133484 Msa0870610:CDS
AAATGGTCTGGTCATGGAAA+CGG 0.425172 6_1:-5135763 Msa0870610:CDS
TAGTCCAAAATGCTTTAGAA+AGG 0.426127 6_1:-5133225 Msa0870610:CDS
AATGTCTCAATTATTCTACT+TGG 0.427808 6_1:-5134026 Msa0870610:CDS
CATTGTTTAGTGGTACCATA+AGG 0.429182 6_1:-5133501 Msa0870610:CDS
AGTTGCAATTAAAGTGGCTT+AGG 0.430423 6_1:-5136875 Msa0870610:CDS
AGAAGAATCTCTCCACCAAT+TGG 0.431398 6_1:+5136918 None:intergenic
TGAGACAGGGCTTTCGGAGC+TGG 0.431518 6_1:-5137233 Msa0870610:intron
TCAAGATGTTCTTAGTGAAA+AGG 0.432958 6_1:-5138910 Msa0870610:intron
GATGAGGATCAAAATTCTAC+AGG 0.433099 6_1:-5135114 Msa0870610:CDS
AATGGTCTGGTCATGGAAAC+GGG 0.434033 6_1:-5135762 Msa0870610:CDS
ATTGTCACTATCCCTTTAAG+TGG 0.434739 6_1:+5133598 None:intergenic
TTTGGTTTGATTGGTGCCAT+TGG 0.436052 6_1:-5139645 Msa0870610:CDS
CTTGAAAATAATGGGAGTTA+GGG 0.439759 6_1:-5132687 Msa0870610:three_prime_UTR
GATTCTACGATCCACTTAAA+GGG 0.444853 6_1:-5133609 Msa0870610:CDS
GGTTATTGTTGGACAAGAAC+AGG 0.447706 6_1:-5139065 Msa0870610:CDS
TATGGAGATTGGCAATTGTT+GGG 0.447984 6_1:-5138278 Msa0870610:CDS
AATGTACTTGCTGTGATAAC+AGG 0.448797 6_1:-5132930 Msa0870610:three_prime_UTR
TGGAAGAATTTCAATGGGAT+TGG 0.449704 6_1:-5138214 Msa0870610:CDS
TGCAGCAGGAGAAAGAATAA+TGG 0.451264 6_1:-5137177 Msa0870610:CDS
CTTCTTTAGAGGGTTATTGT+TGG 0.452038 6_1:-5139076 Msa0870610:intron
CCTAATCATTGCATGGAGAC+TGG 0.453945 6_1:-5134313 Msa0870610:CDS
TGCTGGTAAATCGACCGCTT+TGG 0.454757 6_1:-5133680 Msa0870610:CDS
TGCGGTCGTTCAAAATGGTC+TGG 0.454863 6_1:-5135775 Msa0870610:CDS
TGCTTGACATATTCTTAAGA+AGG 0.456324 6_1:+5134232 None:intergenic
TGCTTGTTCTGCTATTGTAC+CGG 0.456982 6_1:+5138161 None:intergenic
TTGGAAGGATCAGTGAAGTT+GGG 0.459483 6_1:-5138069 Msa0870610:CDS
TTCATAAGTTGCAATTAAAG+TGG 0.459921 6_1:-5136881 Msa0870610:CDS
GAAGTGTACAACAAGCCAAA+TGG 0.461514 6_1:-5139775 None:intergenic
TTTGGTCATTTCTAGTTCGT+TGG 0.463785 6_1:+5135682 None:intergenic
CCCATTGCAAAAGAATATAT+AGG 0.467773 6_1:+5135345 None:intergenic
ATGAATGCATCTATGTTCCT+TGG 0.469854 6_1:-5138327 Msa0870610:CDS
AATAACACAGGTAAGATCAT+TGG 0.471004 6_1:-5134400 Msa0870610:intron
TTCTCGGAAGCAAGTGCAGC+AGG 0.471913 6_1:-5137191 Msa0870610:CDS
TTCTCGATTAAAATTGATGC+TGG 0.472802 6_1:-5133697 Msa0870610:CDS
GGCAGACTTATGAACTCTAT+TGG 0.474399 6_1:-5139585 Msa0870610:CDS
TTTATATCAAGCTTAAAAGA+TGG 0.475266 6_1:-5133394 Msa0870610:CDS
GAAATTCTAGAGAAAGTGTC+GGG 0.475562 6_1:-5137107 Msa0870610:CDS
TTTGGAAGGATCAGTGAAGT+TGG 0.476080 6_1:-5138070 Msa0870610:CDS
GAAGGTTGTTGGCCATGAAT+GGG 0.476399 6_1:-5135428 Msa0870610:CDS
AAAGGGATAGTGACAATTGA+TGG 0.477038 6_1:-5133592 Msa0870610:CDS
ATTCATCTTTGTTGTCAAAA+GGG 0.477153 6_1:-5133093 Msa0870610:CDS
CTACTACAGGTTGGGGAGAG+GGG 0.480194 6_1:-5136008 Msa0870610:intron
TTATGGAGATTGGCAATTGT+TGG 0.481253 6_1:-5138279 Msa0870610:CDS
TTGATTGGTGCCATTGGTGA+TGG 0.481889 6_1:-5139639 Msa0870610:CDS
AAAGAAGCAAGCAACAAAAG+AGG 0.484621 6_1:+5139180 None:intergenic
TGCATGCAGATGCTATTGAT+TGG 0.485589 6_1:-5139680 Msa0870610:CDS
TCATCCAAAAGCAACACCTC+TGG 0.486345 6_1:+5133283 None:intergenic
TTGTAACCTCTCAAGTCATC+CGG 0.486683 6_1:+5133805 None:intergenic
AGTCCAAAATGCTTTAGAAA+GGG 0.488008 6_1:-5133224 Msa0870610:CDS
GTCATGTATCATGGTGCTAA+AGG 0.488230 6_1:-5137952 Msa0870610:CDS
GAGAGGGGAGTTCAAATGTC+AGG 0.488932 6_1:-5135993 Msa0870610:CDS
AATTCTCAAAATGCTTGAAA+AGG 0.489092 6_1:-5134118 Msa0870610:CDS
AGCAATATCTTCAATTAGAA+CGG 0.489171 6_1:-5138142 Msa0870610:CDS
ATGTCTCAATTATTCTACTT+GGG 0.489885 6_1:-5134025 Msa0870610:CDS
GACACTCCATCTATCATGAA+TGG 0.491606 6_1:-5135654 Msa0870610:CDS
TTGAAAATATTAGACAGTCT+TGG 0.492515 6_1:-5134077 Msa0870610:CDS
GGGAAAACAGTGGCATTAGT+AGG 0.496148 6_1:-5136996 Msa0870610:CDS
ATACTTGTTGCAAACAAAGC+AGG 0.496368 6_1:+5136825 None:intergenic
TTTGCTTCTTGATCTCATCA+TGG 0.496658 6_1:+5135295 None:intergenic
GCTTTCTCTAATGCTTTGGA+AGG 0.497605 6_1:-5138084 Msa0870610:CDS
ATGTATGGAAGAATTTCAAT+GGG 0.497701 6_1:-5138219 Msa0870610:CDS
AAGTGTACAACAAGCCAAAT+GGG 0.497941 6_1:-5139774 None:intergenic
ATTGTTTAGTGGTACCATAA+GGG 0.498161 6_1:-5133500 Msa0870610:CDS
TTGAAACAAGGCTTAGCTAA+AGG 0.499443 6_1:-5138045 Msa0870610:CDS
GCTTTAGAAAGGGTTATGGT+TGG 0.499709 6_1:-5133214 Msa0870610:CDS
TGAAATTATAGAGGCATCAA+AGG 0.500437 6_1:-5133434 Msa0870610:CDS
CCAGTCTCCATGCAATGATT+AGG 0.501803 6_1:+5134313 None:intergenic
CAAGGCTTAGCTAAAGGCTT+AGG 0.506031 6_1:-5138039 Msa0870610:CDS
GGAATTTCAATAACACTTGG+AGG 0.507141 6_1:-5137910 Msa0870610:CDS
TGTACAATCATCAAAACTGT+TGG 0.508674 6_1:-5132838 Msa0870610:three_prime_UTR
TGGGAGAGTACTTGACTAAG+AGG 0.513417 6_1:-5135188 Msa0870610:CDS
GCTCTAGACAAAGCTGCAGT+TGG 0.513749 6_1:-5135855 Msa0870610:CDS
TACTACTACAGGTTGGGGAG+AGG 0.515830 6_1:-5136010 Msa0870610:intron
GTGGTAATAGCATTCACAAT+GGG 0.516199 6_1:-5134336 Msa0870610:CDS
ATCATCACATTAGGTCTAGC+CGG 0.516503 6_1:+5133730 None:intergenic
GCTAAAGGCTCTGATGCCAT+TGG 0.518356 6_1:-5133868 Msa0870610:CDS
AAGATCACTCGTCATGCTAC+CGG 0.520100 6_1:+5133891 None:intergenic
ATATGGAGCTTATGATGATA+AGG 0.520300 6_1:-5133467 Msa0870610:CDS
ACTACTACAGGTTGGGGAGA+GGG 0.520720 6_1:-5136009 Msa0870610:intron
GATACATTGTGTGGTGATAG+AGG 0.522055 6_1:-5133367 Msa0870610:CDS
AAGGGAAGTGTTGTTGAGAA+AGG 0.523547 6_1:-5133121 Msa0870610:CDS
AAGTGGCTTAGGTCTCAAAT+GGG 0.523625 6_1:-5136864 Msa0870610:CDS
TAAGAAAAGGGAGAAGGTTG+AGG 0.524831 6_1:-5135463 Msa0870610:CDS
AACTTCAAAAGTGAGTATCT+TGG 0.525144 6_1:+5135146 None:intergenic
ACCGCTTTGGTAGGGGAAAG+TGG 0.527627 6_1:-5133667 Msa0870610:CDS
GTAAATCGACCGCTTTGGTA+GGG 0.527659 6_1:-5133675 Msa0870610:CDS
TAGAAAGGGTTATGGTTGGA+AGG 0.530375 6_1:-5133210 Msa0870610:CDS
AGAGAACCTTATTGATGTCA+TGG 0.534155 6_1:+5139529 None:intergenic
CGTTCAAAATGGTCTGGTCA+TGG 0.534966 6_1:-5135769 Msa0870610:CDS
GGTAAATCGACCGCTTTGGT+AGG 0.539757 6_1:-5133676 Msa0870610:CDS
TATGTCAAGCAAAGCCATCA+AGG 0.540426 6_1:-5134220 Msa0870610:CDS
TAGTTCGTTGGAAACGAACA+AGG 0.541208 6_1:+5135694 None:intergenic
GTGGCATTAGTAGGAGGAAG+TGG 0.541283 6_1:-5136987 Msa0870610:CDS
AAGCAGCAAGAATGAGAGCT+AGG 0.543442 6_1:-5139034 Msa0870610:CDS
TCCATCGTTTCGAAGGTTGT+TGG 0.543756 6_1:-5135439 Msa0870610:CDS
GATAGAGGAGTTCAACTTAG+TGG 0.543851 6_1:-5133352 Msa0870610:CDS
ATGGTACCACTAAACAATGT+TGG 0.543943 6_1:+5133505 None:intergenic
TGATGAGAATGAAATTATAG+AGG 0.546036 6_1:-5133443 Msa0870610:CDS
TGAAGTTGGTTGGTTTGATG+AGG 0.546619 6_1:-5135130 Msa0870610:CDS
GTACAATAAGAAAAGGGAGA+AGG 0.548517 6_1:-5135469 Msa0870610:CDS
TGCTACATTTGAAGAAATTG+TGG 0.550358 6_1:-5136772 Msa0870610:CDS
TTGAGGTTCCATCGTTTCGA+AGG 0.551336 6_1:-5135446 Msa0870610:CDS
CATTATAGCTTTGCTTACAT+GGG 0.552491 6_1:-5135207 Msa0870610:CDS
GCCAACAACCTTCGAAACGA+TGG 0.555364 6_1:+5135438 None:intergenic
GTTGGAATTTCAATAACACT+TGG 0.555591 6_1:-5137913 Msa0870610:CDS
GGCTTAGGCATAGGAAGCAA+TGG 0.556154 6_1:-5138024 Msa0870610:CDS
CAAGTGTAGTTGTGGCGCAT+AGG 0.556394 6_1:-5133186 Msa0870610:CDS
TCATTTGTTGTTTCTACACA+AGG 0.556470 6_1:-5134260 Msa0870610:CDS
ATGACGAGTGATCTTGCTAA+AGG 0.557275 6_1:-5133883 Msa0870610:CDS
TCATAAGTACAATAAGAAAA+GGG 0.557615 6_1:-5135475 Msa0870610:CDS
TTCATTTCATTGTTGCCACA+AGG 0.559045 6_1:-5136720 Msa0870610:CDS
ATGCTGCTATGTAGCTTCCA+AGG 0.561319 6_1:+5138310 None:intergenic
AACACAGGTAAGATCATTGG+TGG 0.565565 6_1:-5134397 Msa0870610:intron
TAAATCGACCGCTTTGGTAG+GGG 0.566754 6_1:-5133674 Msa0870610:CDS
TTGAGATAACAGCCAACCCT+AGG 0.569368 6_1:+5135250 None:intergenic
TGAAATTCAAAATAAAATTG+AGG 0.572567 6_1:-5132907 Msa0870610:three_prime_UTR
AGCAGAATGGTCATGTATCA+TGG 0.573334 6_1:-5137961 Msa0870610:CDS
AGAGAAGAGTACAATAAAGC+CGG 0.574894 6_1:-5138180 Msa0870610:CDS
GGAAGAGTTATTGCTGATGC+CGG 0.578004 6_1:-5133910 Msa0870610:CDS
TTAGCTAAAGGCTTAGGCAT+AGG 0.578747 6_1:-5138033 Msa0870610:CDS
AGGCTCTGATGCCATTGGAT+CGG 0.581984 6_1:-5133863 Msa0870610:CDS
ATTGATTCTGAAAATATGGA+AGG 0.584566 6_1:-5137131 Msa0870610:CDS
GAGGGGAGTTCAAATGTCAG+GGG 0.590113 6_1:-5135991 Msa0870610:CDS
GCAAGGTTATATCTCGGCTA+AGG 0.590372 6_1:-5133968 Msa0870610:CDS
TAGAAACAACAAATGATAAG+TGG 0.590453 6_1:+5134267 None:intergenic
TAGATGGAGTGTCATCACTT+TGG 0.594249 6_1:+5135664 None:intergenic
GCCACAAGGATATGATACTC+AGG 0.595859 6_1:-5136706 Msa0870610:intron
ATCCTATTATGGTAGCAGAA+TGG 0.598761 6_1:-5137974 Msa0870610:CDS
AACTGATATGCCATCACCAA+TGG 0.599007 6_1:+5139629 None:intergenic
CAATGGGCCTAATCATTGCA+TGG 0.600013 6_1:-5134320 Msa0870610:CDS
GTGAAGTTGGGATTGAAACA+AGG 0.603601 6_1:-5138057 Msa0870610:CDS
TAGGCTGTCGTTAGAGACAC+TGG 0.605065 6_1:+5138938 None:intergenic
GATTGCGAAAACCGATCCAA+TGG 0.605218 6_1:+5133852 None:intergenic
TGGCCATGAATGGGCTAGAG+TGG 0.609073 6_1:-5135419 Msa0870610:CDS
AAAACAGTGGCATTAGTAGG+AGG 0.609878 6_1:-5136993 Msa0870610:CDS
AATTCAAAATAAAATTGAGG+AGG 0.613514 6_1:-5132904 Msa0870610:three_prime_UTR
AGAGGGGAGTTCAAATGTCA+GGG 0.616275 6_1:-5135992 Msa0870610:CDS
TGTGTCGCAAGGTTATATCT+CGG 0.619791 6_1:-5133974 Msa0870610:CDS
AACTATATAGTAATTAACAT+AGG 0.627132 6_1:+5132794 None:intergenic
GGTGGAAAACTTGTGTCGCA+AGG 0.628793 6_1:-5133985 Msa0870610:CDS
TTTGCTTAAAGGTTCCATCA+GGG 0.628922 6_1:-5137016 Msa0870610:CDS
TGAAATTCTAGAGAAAGTGT+CGG 0.633555 6_1:-5137108 Msa0870610:CDS
ATGCTTGAAAAGGCCCAACA+AGG 0.636908 6_1:-5134108 Msa0870610:CDS
ATTCTTCCATACATGAAACC+AGG 0.638197 6_1:+5138228 None:intergenic
TTCAACTCAATGACACACGT+TGG 0.640915 6_1:-5135579 Msa0870610:CDS
CCAAAATGCTGATATTATTG+CGG 0.641301 6_1:-5135793 Msa0870610:CDS
AGTACAAACAATTTCAGCAG+TGG 0.641972 6_1:-5134355 Msa0870610:CDS
TGGAAGGACAAGTGTAGTTG+TGG 0.644127 6_1:-5133194 Msa0870610:CDS
TTGAAGAGAACATACCACAT+TGG 0.644906 6_1:+5135062 None:intergenic
ACCTGAGTATCATATCCTTG+TGG 0.648226 6_1:+5136705 None:intergenic
TAAGAACATCTTGAATCACT+AGG 0.649292 6_1:+5138919 None:intergenic
AAAGAGTAATAAGCACCACT+TGG 0.651933 6_1:+5133070 None:intergenic
ACCACTTTCCCCTACCAAAG+CGG 0.654471 6_1:+5133666 None:intergenic
GGGAGAGTACTTGACTAAGA+GGG 0.657633 6_1:-5135187 Msa0870610:CDS
TTGAACTGCTATCATAACAA+TGG 0.657829 6_1:+5134290 None:intergenic
ATGGATACGCAAATTCAACA+TGG 0.672365 6_1:+5137069 None:intergenic
AGAGGAGTTCAACTTAGTGG+TGG 0.673586 6_1:-5133349 Msa0870610:CDS
ATCAAGCCGGATGACTTGAG+AGG 0.676695 6_1:-5133811 Msa0870610:CDS
TTGTTGTCAAAAGGGCCAAG+TGG 0.677488 6_1:-5133085 Msa0870610:CDS
TAAGCGGTGAGCGATGATGA+TGG 0.679275 6_1:+5135824 None:intergenic
ATGTATCATGGTGCTAAAGG+CGG 0.679485 6_1:-5137949 Msa0870610:CDS
AGCTATATTGAAGAATCCAG+AGG 0.682072 6_1:-5133299 Msa0870610:CDS
GATGGTTATGATACATTGTG+TGG 0.682598 6_1:-5133376 Msa0870610:CDS
AGTGGTAATAGCATTCACAA+TGG 0.682880 6_1:-5134337 Msa0870610:CDS
ACTTGCCAAAGATGCCAATG+TGG 0.684674 6_1:-5135076 Msa0870610:intron
CCTGCAATAAACAACAACAA+AGG 0.685022 6_1:+5139606 None:intergenic
AGTTCGTTGGAAACGAACAA+GGG 0.687306 6_1:+5135695 None:intergenic
ACACAGGTAAGATCATTGGT+GGG 0.696726 6_1:-5134396 Msa0870610:intron
TCGTTGGAAACGAACAAGGG+AGG 0.702886 6_1:+5135698 None:intergenic
AAATTCTAGAGAAAGTGTCG+GGG 0.712449 6_1:-5137106 Msa0870610:CDS
AGGGGAGTTCAAATGTCAGG+GGG 0.712833 6_1:-5135990 Msa0870610:CDS
TGTACAACAAGCCAAATGGG+TGG 0.728143 6_1:-5139771 None:intergenic
AATTCTAGAGAAAGTGTCGG+GGG 0.734892 6_1:-5137105 Msa0870610:CDS
GGTTCCATCAGGGAAAACAG+TGG 0.743645 6_1:-5137006 Msa0870610:CDS
GCGGTGAGCGATGATGATGG+TGG 0.769646 6_1:+5135827 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTAAATTTATAATTTCG+AGG + chr6_1:5134926-5134945 None:intergenic 10.0%
!! ACAATTAAAGATAATTAAAT+TGG + chr6_1:5137625-5137644 None:intergenic 10.0%
!!! ATCAATTTTGTTTTCTATAT+AGG - chr6_1:5133582-5133601 Msa0870610:CDS 15.0%
!!! TCAATTTTGTTTTCTATATA+GGG - chr6_1:5133583-5133602 Msa0870610:CDS 15.0%
!! AGACACTTAAAAAATAATTT+AGG + chr6_1:5133782-5133801 None:intergenic 15.0%
!!! TAAATTATTTTTTAAGTGTC+TGG - chr6_1:5133781-5133800 Msa0870610:CDS 15.0%
!! TATGAAATTTAATGTGAAAT+AGG + chr6_1:5133838-5133857 None:intergenic 15.0%
!! AAAAAAAAATAACTAAGTGA+AGG - chr6_1:5136015-5136034 Msa0870610:intron 15.0%
!! AAAAAAAATAACTAAGTGAA+GGG - chr6_1:5136016-5136035 Msa0870610:intron 15.0%
!! TTGTATATAAATTCACATAA+GGG - chr6_1:5137666-5137685 Msa0870610:intron 15.0%
!! TGAAATTCAAAATAAAATTG+AGG - chr6_1:5139533-5139552 Msa0870610:intron 15.0%
!!! ATTGTACAAATGAAATTTTT+TGG + chr6_1:5139590-5139609 None:intergenic 15.0%
!! AACTATATAGTAATTAACAT+AGG + chr6_1:5139649-5139668 None:intergenic 15.0%
!! ATCATATATGATTAAAATCT+TGG - chr6_1:5139723-5139742 Msa0870610:CDS 15.0%
!!! ATCATTAAAGTAGTTTTTGT+TGG - chr6_1:5133045-5133064 Msa0870610:CDS 20.0%
!!! TCATTAAAGTAGTTTTTGTT+GGG - chr6_1:5133046-5133065 Msa0870610:CDS 20.0%
!!! TGCTGTTCTTTTTTTATATT+TGG - chr6_1:5133231-5133250 Msa0870610:CDS 20.0%
!! CATTTGACCTATTAATATTA+TGG - chr6_1:5133664-5133683 Msa0870610:CDS 20.0%
!! TATGCTACCATAATATTAAT+AGG + chr6_1:5133674-5133693 None:intergenic 20.0%
!! CTTAAAAAATAATTTAGGTC+AGG + chr6_1:5133777-5133796 None:intergenic 20.0%
!!! TGATATTTGAACAACTATTT+TGG - chr6_1:5133876-5133895 Msa0870610:CDS 20.0%
!! ATTGAATGGAATGATATAAA+GGG + chr6_1:5134574-5134593 None:intergenic 20.0%
!! AATTGAATGGAATGATATAA+AGG + chr6_1:5134575-5134594 None:intergenic 20.0%
!! TCTGAATAGTATTAATTGAA+TGG + chr6_1:5134588-5134607 None:intergenic 20.0%
!!! ATATTTTCAGAATCAATCTT+TGG + chr6_1:5135306-5135325 None:intergenic 20.0%
!!! AAAGATTGATTCTGAAAATA+TGG - chr6_1:5135305-5135324 Msa0870610:CDS 20.0%
!!! CTTAAATGATTTTTGCTTAA+AGG - chr6_1:5135413-5135432 Msa0870610:CDS 20.0%
!!! ATTAAGGAGAATATACTTTT+TGG - chr6_1:5135636-5135655 Msa0870610:CDS 20.0%
!! AATTTAATCGTGAGATTTAT+TGG - chr6_1:5135838-5135857 Msa0870610:CDS 20.0%
!!! CAAAATTTAGTTTTCAACAT+TGG + chr6_1:5135865-5135884 None:intergenic 20.0%
!!! TAAAAATGTATTGTGTTTTG+GGG + chr6_1:5136066-5136085 None:intergenic 20.0%
!!! CTAAAAATGTATTGTGTTTT+GGG + chr6_1:5136067-5136086 None:intergenic 20.0%
!!! TCTAAAAATGTATTGTGTTT+TGG + chr6_1:5136068-5136087 None:intergenic 20.0%
!! TACTTAAATTGCAGTAAAAT+AGG + chr6_1:5136109-5136128 None:intergenic 20.0%
!!! AATTTTTGGCATTTTTATGA+TGG + chr6_1:5136505-5136524 None:intergenic 20.0%
!! ATCATAAGTACAATAAGAAA+AGG - chr6_1:5136964-5136983 Msa0870610:CDS 20.0%
!! TCATAAGTACAATAAGAAAA+GGG - chr6_1:5136965-5136984 Msa0870610:CDS 20.0%
!!! TAGTAAAGTTTGTTTACATA+TGG - chr6_1:5137524-5137543 Msa0870610:intron 20.0%
!! CTCATGATATATTTAAGTAA+TGG - chr6_1:5137581-5137600 Msa0870610:intron 20.0%
!! CTTGTATATAAATTCACATA+AGG - chr6_1:5137665-5137684 Msa0870610:intron 20.0%
!!! ATAATGTGATATTTTTGCAA+TGG + chr6_1:5137836-5137855 None:intergenic 20.0%
!! AAGTGATATATTTAGAAATG+TGG - chr6_1:5137939-5137958 Msa0870610:CDS 20.0%
!! AGTGATATATTTAGAAATGT+GGG - chr6_1:5137940-5137959 Msa0870610:CDS 20.0%
!! TTTATTCCAATTAATAACAC+AGG - chr6_1:5138028-5138047 Msa0870610:CDS 20.0%
!!! ATTTGAGACTTTTATGATTT+TGG - chr6_1:5138499-5138518 Msa0870610:intron 20.0%
!! TACAAAGCTGAAAAATTAAT+AGG - chr6_1:5138653-5138672 Msa0870610:intron 20.0%
!! ACATAAAGACTTATAATCTA+AGG - chr6_1:5138876-5138895 Msa0870610:intron 20.0%
!! TTTATATCAAGCTTAAAAGA+TGG - chr6_1:5139046-5139065 Msa0870610:CDS 20.0%
!! GAATCAGAAATTAAATTGTT+TGG + chr6_1:5139415-5139434 None:intergenic 20.0%
!! AATTCAAAATAAAATTGAGG+AGG - chr6_1:5139536-5139555 Msa0870610:CDS 20.0%
! AATGATAAGAGCAATTTCAA+GGG + chr6_1:5133031-5133050 None:intergenic 25.0%
! TAATGATAAGAGCAATTTCA+AGG + chr6_1:5133032-5133051 None:intergenic 25.0%
!! CATTAAAGTAGTTTTTGTTG+GGG - chr6_1:5133047-5133066 Msa0870610:CDS 25.0%
!!! AAAATAACATTAGCCTTAGT+TGG - chr6_1:5133173-5133192 Msa0870610:CDS 25.0%
! AATCAAATTCAAACCAACTA+AGG + chr6_1:5133189-5133208 None:intergenic 25.0%
!!! TTCAGTTTTGTTACTGTTTT+TGG - chr6_1:5133291-5133310 Msa0870610:CDS 25.0%
! TAACATTATACCTTCTTTAG+AGG - chr6_1:5133353-5133372 Msa0870610:CDS 25.0%
! AACATTATACCTTCTTTAGA+GGG - chr6_1:5133354-5133373 Msa0870610:CDS 25.0%
!! TCAAATGAGTTTGTATTTTG+TGG + chr6_1:5133651-5133670 None:intergenic 25.0%
! AGACCATACTTAGATTAAAT+AGG - chr6_1:5133708-5133727 Msa0870610:CDS 25.0%
! AGACCTATTTAATCTAAGTA+TGG + chr6_1:5133714-5133733 None:intergenic 25.0%
! TGACCTATTATAATACTCTA+AGG - chr6_1:5133733-5133752 Msa0870610:CDS 25.0%
!! TAGGCTTTTAAATATGCTTT+CGG + chr6_1:5133819-5133838 None:intergenic 25.0%
!!! AACTATTTTGGTACAACTTT+TGG - chr6_1:5133888-5133907 Msa0870610:CDS 25.0%
!!! ACTATTTTGGTACAACTTTT+GGG - chr6_1:5133889-5133908 Msa0870610:CDS 25.0%
! TTACAATCCGAAACTTATAT+AGG - chr6_1:5134076-5134095 Msa0870610:CDS 25.0%
!! TTTGGAACCTATATAAGTTT+CGG + chr6_1:5134086-5134105 None:intergenic 25.0%
! GATGCATTCATCAAAAAATT+TGG + chr6_1:5134104-5134123 None:intergenic 25.0%
! ATGTATGGAAGAATTTCAAT+GGG - chr6_1:5134221-5134240 Msa0870610:CDS 25.0%
! AGCAATATCTTCAATTAGAA+CGG - chr6_1:5134298-5134317 Msa0870610:CDS 25.0%
! TGAAATTCCAACTGAATAAA+CGG + chr6_1:5134519-5134538 None:intergenic 25.0%
! GAAAAAAAAACACATAGAGA+CGG + chr6_1:5134659-5134678 None:intergenic 25.0%
! ATAATTTCGAGGTTGAAATT+TGG + chr6_1:5134915-5134934 None:intergenic 25.0%
! AAATTTGCATTGAAATCAGA+TGG - chr6_1:5134962-5134981 Msa0870610:intron 25.0%
!!! ATTAAGCACAAGGTTTTAAA+TGG + chr6_1:5135148-5135167 None:intergenic 25.0%
!! ATATATTTTCCTTATGAGAC+AGG - chr6_1:5135193-5135212 Msa0870610:CDS 25.0%
!! TATATTTTCCTTATGAGACA+GGG - chr6_1:5135194-5135213 Msa0870610:CDS 25.0%
!! ATTGATTCTGAAAATATGGA+AGG - chr6_1:5135309-5135328 Msa0870610:CDS 25.0%
!! CAAAGATTTTATGATCCAAT+TGG - chr6_1:5135507-5135526 Msa0870610:CDS 25.0%
! TTCATAAGTTGCAATTAAAG+TGG - chr6_1:5135559-5135578 Msa0870610:CDS 25.0%
! TTTGTTTGCAACAAGTATTA+AGG - chr6_1:5135620-5135639 Msa0870610:CDS 25.0%
! CTCACGATTAAATTATATGA+AGG + chr6_1:5135832-5135851 None:intergenic 25.0%
! AGAATTAGAAAGACACTATT+TGG - chr6_1:5136173-5136192 Msa0870610:intron 25.0%
! TCTATTCAATGAAATGTATG+TGG - chr6_1:5136215-5136234 Msa0870610:intron 25.0%
! AATTGTATGTTTACTACTAC+AGG - chr6_1:5136419-5136438 Msa0870610:intron 25.0%
!! TCGTCTAACAATAGAATTTT+TGG + chr6_1:5136519-5136538 None:intergenic 25.0%
!! AATAATATCAGCATTTTGGA+TGG + chr6_1:5136646-5136665 None:intergenic 25.0%
!!! TGTTTTAATGCGGTTTTATT+TGG - chr6_1:5137062-5137081 Msa0870610:CDS 25.0%
!! ACCTATATATTCTTTTGCAA+TGG - chr6_1:5137094-5137113 Msa0870610:CDS 25.0%
!! CCTATATATTCTTTTGCAAT+GGG - chr6_1:5137095-5137114 Msa0870610:CDS 25.0%
!! CTATATATTCTTTTGCAATG+GGG - chr6_1:5137096-5137115 Msa0870610:CDS 25.0%
!!! TTTTGAAGTGTCACATATAT+TGG - chr6_1:5137739-5137758 Msa0870610:intron 25.0%
!! TTTGAAGTGTCACATATATT+GGG - chr6_1:5137740-5137759 Msa0870610:intron 25.0%
! GTGATATATTTAGAAATGTG+GGG - chr6_1:5137941-5137960 Msa0870610:CDS 25.0%
!! ATCTTACCTGTGTTATTAAT+TGG + chr6_1:5138037-5138056 None:intergenic 25.0%
! TAGAAACAACAAATGATAAG+TGG + chr6_1:5138176-5138195 None:intergenic 25.0%
! AATTCTCAAAATGCTTGAAA+AGG - chr6_1:5138322-5138341 Msa0870610:CDS 25.0%
!!! TGTCTAATATTTTCAAGACT+CGG + chr6_1:5138359-5138378 None:intergenic 25.0%
! TTGAAAATATTAGACAGTCT+TGG - chr6_1:5138363-5138382 Msa0870610:intron 25.0%
! AATGTCTCAATTATTCTACT+TGG - chr6_1:5138414-5138433 Msa0870610:intron 25.0%
! ATGTCTCAATTATTCTACTT+GGG - chr6_1:5138415-5138434 Msa0870610:intron 25.0%
!!! TTTATGATTTTGGTAAGTAC+AGG - chr6_1:5138509-5138528 Msa0870610:intron 25.0%
!!! CTAATGTGATGATTTTTCAA+GGG - chr6_1:5138720-5138739 Msa0870610:intron 25.0%
!! CTTATAATCTAAGGTCATTA+AGG - chr6_1:5138885-5138904 Msa0870610:intron 25.0%
!! ATATGCAATATTTTCCCTTA+TGG + chr6_1:5138957-5138976 None:intergenic 25.0%
! ATAAGGGAAAATATTGCATA+TGG - chr6_1:5138956-5138975 Msa0870610:CDS 25.0%
! TGATGAGAATGAAATTATAG+AGG - chr6_1:5138997-5139016 Msa0870610:CDS 25.0%
!! ATTCATCTTTGTTGTCAAAA+GGG - chr6_1:5139347-5139366 Msa0870610:intron 25.0%
!! TTACGTTTTTCATGTTTGAA+GGG - chr6_1:5139464-5139483 Msa0870610:intron 25.0%
! AAATAAAATTGAGGAGGTTT+AGG - chr6_1:5139542-5139561 Msa0870610:CDS 25.0%
! AATAAAATTGAGGAGGTTTA+GGG - chr6_1:5139543-5139562 Msa0870610:CDS 25.0%
!!! GAAATTTTTTGGAAGCTAAA+GGG + chr6_1:5139579-5139598 None:intergenic 25.0%
!!! TGAAATTTTTTGGAAGCTAA+AGG + chr6_1:5139580-5139599 None:intergenic 25.0%
!! CATCTTCTTTTTACTATGTA+TGG - chr6_1:5139686-5139705 Msa0870610:CDS 25.0%
GCTAAGAAGAAGAAGAAAAA+TGG - chr6_1:5132717-5132736 Msa0870610:three_prime_UTR 30.0%
!!! TGCTATTGATTGGTTTTTCA+TGG - chr6_1:5132770-5132789 Msa0870610:three_prime_UTR 30.0%
!!! GATTGGTTTTTCATGGTTTT+TGG - chr6_1:5132777-5132796 Msa0870610:three_prime_UTR 30.0%
!!! TTCATGGTTTTTGGTTTGAT+TGG - chr6_1:5132786-5132805 Msa0870610:three_prime_UTR 30.0%
! TTTTGTCCATGACATCAATA+AGG - chr6_1:5132905-5132924 Msa0870610:three_prime_UTR 30.0%
TCATAGAATGATTCATGCAA+AGG + chr6_1:5133078-5133097 None:intergenic 30.0%
TTCTCTACATGTTTGAAGAA+GGG + chr6_1:5133143-5133162 None:intergenic 30.0%
TTTCTCTACATGTTTGAAGA+AGG + chr6_1:5133144-5133163 None:intergenic 30.0%
TAAGAACATCTTGAATCACT+AGG + chr6_1:5133524-5133543 None:intergenic 30.0%
TCAAGATGTTCTTAGTGAAA+AGG - chr6_1:5133530-5133549 Msa0870610:CDS 30.0%
TATAGGGATGAAAATAGATC+AGG - chr6_1:5133599-5133618 Msa0870610:CDS 30.0%
!!! CTTTTCACTTTTTGATGACA+TGG + chr6_1:5133625-5133644 None:intergenic 30.0%
CATGTCATCAAAAAGTGAAA+AGG - chr6_1:5133623-5133642 Msa0870610:CDS 30.0%
! AGGCCTTAGAGTATTATAAT+AGG + chr6_1:5133739-5133758 None:intergenic 30.0%
! AGGCTTTTAAATATGCTTTC+GGG + chr6_1:5133818-5133837 None:intergenic 30.0%
TTCTCATTGGTCAAAAACAA+TGG - chr6_1:5133931-5133950 Msa0870610:CDS 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr6_1:5133944-5133963 Msa0870610:CDS 30.0%
GAGAGAAAGTTGTACAAAAA+TGG - chr6_1:5134000-5134019 Msa0870610:CDS 30.0%
ATTTGCATTGTTATGGAGAT+TGG - chr6_1:5134151-5134170 Msa0870610:CDS 30.0%
TCACTAGTACTACCAAAAAA+GGG + chr6_1:5134190-5134209 None:intergenic 30.0%
ATCACTAGTACTACCAAAAA+AGG + chr6_1:5134191-5134210 None:intergenic 30.0%
CATGTATGGAAGAATTTCAA+TGG - chr6_1:5134220-5134239 Msa0870610:CDS 30.0%
TGGTCTTTGATATCCTATTA+TGG - chr6_1:5134455-5134474 Msa0870610:intron 30.0%
GTTGGAATTTCAATAACACT+TGG - chr6_1:5134527-5134546 Msa0870610:intron 30.0%
CAGAAAAAAAAACACAGAGA+CGG - chr6_1:5134682-5134701 Msa0870610:intron 30.0%
TTTCTTACTTTGTGAGCTTA+AGG - chr6_1:5134812-5134831 Msa0870610:intron 30.0%
TTTGTGAGCTTAAGGTATAA+GGG - chr6_1:5134820-5134839 Msa0870610:intron 30.0%
AGTTGTATCTTGTCCAAATA+TGG + chr6_1:5134890-5134909 None:intergenic 30.0%
! ATCAAATGTGAAGTACTTCT+CGG - chr6_1:5135233-5135252 Msa0870610:CDS 30.0%
! TGAAATTCTAGAGAAAGTGT+CGG - chr6_1:5135332-5135351 Msa0870610:CDS 30.0%
! TCATTTAAGATCACACTTTC+TGG + chr6_1:5135402-5135421 None:intergenic 30.0%
! AGATTTTATGATCCAATTGG+TGG - chr6_1:5135510-5135529 Msa0870610:CDS 30.0%
!! GAATATACTTTTTGGAAGAG+AGG - chr6_1:5135644-5135663 Msa0870610:CDS 30.0%
TGCTACATTTGAAGAAATTG+TGG - chr6_1:5135668-5135687 Msa0870610:CDS 30.0%
GATGTGACTTATTGATCTAA+TGG + chr6_1:5135806-5135825 None:intergenic 30.0%
ATGAATTTCGAGCAATATCA+TGG - chr6_1:5136262-5136281 Msa0870610:intron 30.0%
TATGTTTACTACTACAGGTT+GGG - chr6_1:5136424-5136443 Msa0870610:intron 30.0%
! CAATTGCAATTCTTTGCTTT+TGG + chr6_1:5136476-5136495 None:intergenic 30.0%
CCAAAATGCTGATATTATTG+CGG - chr6_1:5136647-5136666 Msa0870610:intron 30.0%
!!! GAGAATTGTCATTTTTCATG+AGG + chr6_1:5136716-5136735 None:intergenic 30.0%
!!! ATGTTTGGGTTGTTTTAATG+CGG - chr6_1:5137052-5137071 Msa0870610:CDS 30.0%
CCCATTGCAAAAGAATATAT+AGG + chr6_1:5137098-5137117 None:intergenic 30.0%
ATGAGATCAAGAAGCAAATT+AGG - chr6_1:5137150-5137169 Msa0870610:CDS 30.0%
! ACATTATAGCTTTGCTTACA+TGG - chr6_1:5137232-5137251 Msa0870610:intron 30.0%
! CATTATAGCTTTGCTTACAT+GGG - chr6_1:5137233-5137252 Msa0870610:intron 30.0%
AACTTCAAAAGTGAGTATCT+TGG + chr6_1:5137297-5137316 None:intergenic 30.0%
!!! AAGATACTCACTTTTGAAGT+TGG - chr6_1:5137296-5137315 Msa0870610:intron 30.0%
AATACCATAGTGTAGTAAGA+TGG - chr6_1:5137487-5137506 Msa0870610:intron 30.0%
ATACCATAGTGTAGTAAGAT+GGG - chr6_1:5137488-5137507 Msa0870610:intron 30.0%
TATATTTAGAAATGTGGGGT+AGG - chr6_1:5137945-5137964 Msa0870610:CDS 30.0%
ATAAAGAATCACAATGCACA+AGG + chr6_1:5137999-5138018 None:intergenic 30.0%
AATAACACAGGTAAGATCAT+TGG - chr6_1:5138040-5138059 Msa0870610:CDS 30.0%
TTGAACTGCTATCATAACAA+TGG + chr6_1:5138153-5138172 None:intergenic 30.0%
!! TCATTTGTTGTTTCTACACA+AGG - chr6_1:5138180-5138199 Msa0870610:CDS 30.0%
TGCTTGACATATTCTTAAGA+AGG + chr6_1:5138211-5138230 None:intergenic 30.0%
!! TTGAGATGAAAAAGCATTGA+TGG + chr6_1:5138297-5138316 None:intergenic 30.0%
!! GTCTAATATTTTCAAGACTC+GGG + chr6_1:5138358-5138377 None:intergenic 30.0%
! TGATTTTTGTATACCTATCG+AGG + chr6_1:5138613-5138632 None:intergenic 30.0%
TAGGTATACAAAAATCAAGC+CGG - chr6_1:5138616-5138635 Msa0870610:intron 30.0%
! TGATGTACATTTTGCATATC+CGG - chr6_1:5138691-5138710 Msa0870610:intron 30.0%
CCTTGAAAAATCATCACATT+AGG + chr6_1:5138722-5138741 None:intergenic 30.0%
! CCTAATGTGATGATTTTTCA+AGG - chr6_1:5138719-5138738 Msa0870610:intron 30.0%
TTCTCGATTAAAATTGATGC+TGG - chr6_1:5138743-5138762 Msa0870610:intron 30.0%
TCTGGAAAATCAACAATCAT+AGG - chr6_1:5138797-5138816 Msa0870610:intron 30.0%
ATTGTTTAGTGGTACCATAA+GGG - chr6_1:5138940-5138959 Msa0870610:CDS 30.0%
ATATGGAGCTTATGATGATA+AGG - chr6_1:5138973-5138992 Msa0870610:CDS 30.0%
!! TGAAATTATAGAGGCATCAA+AGG - chr6_1:5139006-5139025 Msa0870610:CDS 30.0%
!! TAGTCCAAAATGCTTTAGAA+AGG - chr6_1:5139215-5139234 Msa0870610:intron 30.0%
!! AGTCCAAAATGCTTTAGAAA+GGG - chr6_1:5139216-5139235 Msa0870610:intron 30.0%
!!! TAACCCTTTCTAAAGCATTT+TGG + chr6_1:5139222-5139241 None:intergenic 30.0%
!! AAATGCTTTAGAAAGGGTTA+TGG - chr6_1:5139222-5139241 Msa0870610:intron 30.0%
!!! TTGTGATTTGATTGCTGTTT+TGG - chr6_1:5139294-5139313 Msa0870610:intron 30.0%
!!! TTTGATTGCTGTTTTGGATA+AGG - chr6_1:5139300-5139319 Msa0870610:intron 30.0%
!!! TTGATTGCTGTTTTGGATAA+GGG - chr6_1:5139301-5139320 Msa0870610:intron 30.0%
! CATTCATCTTTGTTGTCAAA+AGG - chr6_1:5139346-5139365 Msa0870610:intron 30.0%
! GTTACGTTTTTCATGTTTGA+AGG - chr6_1:5139463-5139482 Msa0870610:intron 30.0%
TGTACAATCATCAAAACTGT+TGG - chr6_1:5139602-5139621 Msa0870610:CDS 30.0%
! CTTGAAAATAATGGGAGTTA+GGG - chr6_1:5139753-5139772 Msa0870610:CDS 30.0%
CCTGCAATAAACAACAACAA+AGG + chr6_1:5132837-5132856 None:intergenic 35.0%
!! CCTTTGTTGTTGTTTATTGC+AGG - chr6_1:5132834-5132853 Msa0870610:three_prime_UTR 35.0%
AGAGAACCTTATTGATGTCA+TGG + chr6_1:5132914-5132933 None:intergenic 35.0%
AAAGAAGCAAGCAACAAAAG+AGG + chr6_1:5133263-5133282 None:intergenic 35.0%
!! TCTTTTGTTGCTTGCTTCTT+TGG - chr6_1:5133262-5133281 Msa0870610:CDS 35.0%
! CAACAATAACCCTCTAAAGA+AGG + chr6_1:5133366-5133385 None:intergenic 35.0%
! CTTCTTTAGAGGGTTATTGT+TGG - chr6_1:5133364-5133383 Msa0870610:CDS 35.0%
AATGAGAAGAGAGAACAACA+AGG + chr6_1:5133919-5133938 None:intergenic 35.0%
! TTGTTGTTCTCTCTTCTCAT+TGG - chr6_1:5133918-5133937 Msa0870610:CDS 35.0%
ATGAATGCATCTATGTTCCT+TGG - chr6_1:5134113-5134132 Msa0870610:CDS 35.0%
TAGCAGCATTTGCATTGTTA+TGG - chr6_1:5134144-5134163 Msa0870610:CDS 35.0%
TTATGGAGATTGGCAATTGT+TGG - chr6_1:5134161-5134180 Msa0870610:CDS 35.0%
TATGGAGATTGGCAATTGTT+GGG - chr6_1:5134162-5134181 Msa0870610:CDS 35.0%
!!! AATTGTTGGGTTCCCTTTTT+TGG - chr6_1:5134175-5134194 Msa0870610:CDS 35.0%
ATTCTTCCATACATGAAACC+AGG + chr6_1:5134215-5134234 None:intergenic 35.0%
TGGAAGAATTTCAATGGGAT+TGG - chr6_1:5134226-5134245 Msa0870610:CDS 35.0%
! AGAGAAGAGTACAATAAAGC+CGG - chr6_1:5134260-5134279 Msa0870610:CDS 35.0%
AGCATTAGAGAAAGCAGTTA+TGG + chr6_1:5134351-5134370 None:intergenic 35.0%
AACTGCTTTCTCTAATGCTT+TGG - chr6_1:5134352-5134371 Msa0870610:CDS 35.0%
TTGAAACAAGGCTTAGCTAA+AGG - chr6_1:5134395-5134414 Msa0870610:intron 35.0%
!!! ATGGTCTTGTTTTTGCTGTA+TGG - chr6_1:5134435-5134454 Msa0870610:intron 35.0%
ATCCTATTATGGTAGCAGAA+TGG - chr6_1:5134466-5134485 Msa0870610:intron 35.0%
GGAATTTCAATAACACTTGG+AGG - chr6_1:5134530-5134549 Msa0870610:intron 35.0%
CTTTGTGAGCTTAAGGTATA+AGG - chr6_1:5134819-5134838 Msa0870610:intron 35.0%
TGGAGACTTAATAACCATGA+TGG + chr6_1:5135064-5135083 None:intergenic 35.0%
TTAAGTCTCCATGACATCAT+TGG - chr6_1:5135073-5135092 Msa0870610:intron 35.0%
! TTTTAAATGGCGATCAAGTC+AGG + chr6_1:5135135-5135154 None:intergenic 35.0%
AGATGCACAAATTAAGCACA+AGG + chr6_1:5135158-5135177 None:intergenic 35.0%
!! GAAATTCTAGAGAAAGTGTC+GGG - chr6_1:5135333-5135352 Msa0870610:CDS 35.0%
!! AAATTCTAGAGAAAGTGTCG+GGG - chr6_1:5135334-5135353 Msa0870610:CDS 35.0%
ATGGATACGCAAATTCAACA+TGG + chr6_1:5135374-5135393 None:intergenic 35.0%
! TTTTGCTTAAAGGTTCCATC+AGG - chr6_1:5135423-5135442 Msa0870610:CDS 35.0%
TTTGCTTAAAGGTTCCATCA+GGG - chr6_1:5135424-5135443 Msa0870610:CDS 35.0%
AGTTGCAATTAAAGTGGCTT+AGG - chr6_1:5135565-5135584 Msa0870610:CDS 35.0%
! ATACTTGTTGCAAACAAAGC+AGG + chr6_1:5135618-5135637 None:intergenic 35.0%
TTCATTTCATTGTTGCCACA+AGG - chr6_1:5135720-5135739 Msa0870610:CDS 35.0%
TGCACAAGTAAGACAAATCT+TGG + chr6_1:5135894-5135913 None:intergenic 35.0%
ATATCTCACTAACGTTGAGA+TGG - chr6_1:5135938-5135957 Msa0870610:CDS 35.0%
TATCTCACTAACGTTGAGAT+GGG - chr6_1:5135939-5135958 Msa0870610:CDS 35.0%
!!! CATGCACGTTTTTTTTGCTT+TGG - chr6_1:5135968-5135987 Msa0870610:CDS 35.0%
GTATGTTTACTACTACAGGT+TGG - chr6_1:5136423-5136442 Msa0870610:intron 35.0%
ATGTTTACTACTACAGGTTG+GGG - chr6_1:5136425-5136444 Msa0870610:intron 35.0%
! CATTTTGGATGGTAGATAAG+CGG + chr6_1:5136635-5136654 None:intergenic 35.0%
! CCGCAATAATATCAGCATTT+TGG + chr6_1:5136650-5136669 None:intergenic 35.0%
!! TTTGGTCATTTCTAGTTCGT+TGG + chr6_1:5136761-5136780 None:intergenic 35.0%
TGATCTCCATTCATGATAGA+TGG + chr6_1:5136795-5136814 None:intergenic 35.0%
GTACAATAAGAAAAGGGAGA+AGG - chr6_1:5136971-5136990 Msa0870610:CDS 35.0%
! ATATTCTTTTGCAATGGGGT+CGG - chr6_1:5137100-5137119 Msa0870610:CDS 35.0%
! GTCGGTTATATCAGTTTTTC+TGG - chr6_1:5137118-5137137 Msa0870610:CDS 35.0%
! GGTTATATCAGTTTTTCTGG+AGG - chr6_1:5137121-5137140 Msa0870610:CDS 35.0%
TTTGCTTCTTGATCTCATCA+TGG + chr6_1:5137148-5137167 None:intergenic 35.0%
!!! ATCTATGCGTTTTGTTTCCT+AGG - chr6_1:5137173-5137192 Msa0870610:CDS 35.0%
!!! TCTATGCGTTTTGTTTCCTA+GGG - chr6_1:5137174-5137193 Msa0870610:CDS 35.0%
!!! TACTCACTTTTGAAGTTGGT+TGG - chr6_1:5137300-5137319 Msa0870610:intron 35.0%
GATGAGGATCAAAATTCTAC+AGG - chr6_1:5137326-5137345 Msa0870610:intron 35.0%
TTGAAGAGAACATACCACAT+TGG + chr6_1:5137381-5137400 None:intergenic 35.0%
TACCATAGTGTAGTAAGATG+GGG - chr6_1:5137489-5137508 Msa0870610:intron 35.0%
TATGGGACTATGTGACATAT+TGG + chr6_1:5137695-5137714 None:intergenic 35.0%
AGTACAAACAATTTCAGCAG+TGG - chr6_1:5138085-5138104 Msa0870610:CDS 35.0%
AGTGGTAATAGCATTCACAA+TGG - chr6_1:5138103-5138122 Msa0870610:CDS 35.0%
GTGGTAATAGCATTCACAAT+GGG - chr6_1:5138104-5138123 Msa0870610:CDS 35.0%
CAATTATTCTACTTGGGCTT+TGG - chr6_1:5138421-5138440 Msa0870610:intron 35.0%
AGATTCTACGATCCACTTAA+AGG - chr6_1:5138830-5138849 Msa0870610:intron 35.0%
GATTCTACGATCCACTTAAA+GGG - chr6_1:5138831-5138850 Msa0870610:intron 35.0%
ATTGTCACTATCCCTTTAAG+TGG + chr6_1:5138845-5138864 None:intergenic 35.0%
AAAGGGATAGTGACAATTGA+TGG - chr6_1:5138848-5138867 Msa0870610:intron 35.0%
CAAGAACCAACATTGTTTAG+TGG - chr6_1:5138929-5138948 Msa0870610:CDS 35.0%
ATGGTACCACTAAACAATGT+TGG + chr6_1:5138938-5138957 None:intergenic 35.0%
CATTGTTTAGTGGTACCATA+AGG - chr6_1:5138939-5138958 Msa0870610:CDS 35.0%
GATGGTTATGATACATTGTG+TGG - chr6_1:5139064-5139083 Msa0870610:CDS 35.0%
AGCTATATTGAAGAATCCAG+AGG - chr6_1:5139141-5139160 Msa0870610:intron 35.0%
AAAGAGTAATAAGCACCACT+TGG + chr6_1:5139373-5139392 None:intergenic 35.0%
!! AATGTACTTGCTGTGATAAC+AGG - chr6_1:5139510-5139529 Msa0870610:intron 35.0%
!! ACTCCCATTATTTTCAAGGT+GGG + chr6_1:5139751-5139770 None:intergenic 35.0%
!! AACTCCCATTATTTTCAAGG+TGG + chr6_1:5139752-5139771 None:intergenic 35.0%
! CCTAACTCCCATTATTTTCA+AGG + chr6_1:5139755-5139774 None:intergenic 35.0%
! CCTTGAAAATAATGGGAGTT+AGG - chr6_1:5139752-5139771 Msa0870610:CDS 35.0%
AGCATCTGCATGCATGAAAA+TGG + chr6_1:5132754-5132773 None:intergenic 40.0%
TGCATGCAGATGCTATTGAT+TGG - chr6_1:5132760-5132779 Msa0870610:three_prime_UTR 40.0%
!! TTTGGTTTGATTGGTGCCAT+TGG - chr6_1:5132795-5132814 Msa0870610:three_prime_UTR 40.0%
AACTGATATGCCATCACCAA+TGG + chr6_1:5132814-5132833 None:intergenic 40.0%
GGCAGACTTATGAACTCTAT+TGG - chr6_1:5132855-5132874 Msa0870610:three_prime_UTR 40.0%
!! AACTCTATTGGTAGTGCTTC+TGG - chr6_1:5132867-5132886 Msa0870610:three_prime_UTR 40.0%
GTCAGACTTTACTTGCATTC+CGG - chr6_1:5132978-5132997 Msa0870610:three_prime_UTR 40.0%
CTGTTAATCCAGAGTTTAGC+CGG + chr6_1:5133000-5133019 None:intergenic 40.0%
GGTTATTGTTGGACAAGAAC+AGG - chr6_1:5133375-5133394 Msa0870610:CDS 40.0%
! TTGGTAGTACTAGTGATTCC+TGG - chr6_1:5134194-5134213 Msa0870610:CDS 40.0%
GTGATTCCTGGTTTCATGTA+TGG - chr6_1:5134206-5134225 Msa0870610:CDS 40.0%
TGCTTGTTCTGCTATTGTAC+CGG + chr6_1:5134282-5134301 None:intergenic 40.0%
AGAACGGTTTATTCCTTTGC+AGG - chr6_1:5134314-5134333 Msa0870610:CDS 40.0%
! GCTTTCTCTAATGCTTTGGA+AGG - chr6_1:5134356-5134375 Msa0870610:CDS 40.0%
TTTGGAAGGATCAGTGAAGT+TGG - chr6_1:5134370-5134389 Msa0870610:CDS 40.0%
TTGGAAGGATCAGTGAAGTT+GGG - chr6_1:5134371-5134390 Msa0870610:CDS 40.0%
GTGAAGTTGGGATTGAAACA+AGG - chr6_1:5134383-5134402 Msa0870610:CDS 40.0%
TTAGCTAAAGGCTTAGGCAT+AGG - chr6_1:5134407-5134426 Msa0870610:intron 40.0%
GACCATTCTGCTACCATAAT+AGG + chr6_1:5134471-5134490 None:intergenic 40.0%
AGCAGAATGGTCATGTATCA+TGG - chr6_1:5134479-5134498 Msa0870610:intron 40.0%
! GTCATGTATCATGGTGCTAA+AGG - chr6_1:5134488-5134507 Msa0870610:intron 40.0%
! ATGTATCATGGTGCTAAAGG+CGG - chr6_1:5134491-5134510 Msa0870610:intron 40.0%
AGCTTAAGGTATAAGGGTCT+AGG - chr6_1:5134826-5134845 Msa0870610:intron 40.0%
TGTGATCGGTACATTGAGTT+TGG + chr6_1:5135029-5135048 None:intergenic 40.0%
AGATACGACCAATGATGTCA+TGG + chr6_1:5135084-5135103 None:intergenic 40.0%
TGCAGCAGGAGAAAGAATAA+TGG - chr6_1:5135263-5135282 Msa0870610:CDS 40.0%
!! AATTCTAGAGAAAGTGTCGG+GGG - chr6_1:5135335-5135354 Msa0870610:CDS 40.0%
!! ATCACACTTTCTGGTCTTGA+TGG + chr6_1:5135393-5135412 None:intergenic 40.0%
AAAACAGTGGCATTAGTAGG+AGG - chr6_1:5135447-5135466 Msa0870610:CDS 40.0%
AGAAGAATCTCTCCACCAAT+TGG + chr6_1:5135525-5135544 None:intergenic 40.0%
AAAGTGGCTTAGGTCTCAAA+TGG - chr6_1:5135575-5135594 Msa0870610:CDS 40.0%
AAGTGGCTTAGGTCTCAAAT+GGG - chr6_1:5135576-5135595 Msa0870610:CDS 40.0%
ACCTGAGTATCATATCCTTG+TGG + chr6_1:5135738-5135757 None:intergenic 40.0%
AGTTCGTTGGAAACGAACAA+GGG + chr6_1:5136748-5136767 None:intergenic 40.0%
TAGTTCGTTGGAAACGAACA+AGG + chr6_1:5136749-5136768 None:intergenic 40.0%
! TAGATGGAGTGTCATCACTT+TGG + chr6_1:5136779-5136798 None:intergenic 40.0%
GACACTCCATCTATCATGAA+TGG - chr6_1:5136786-5136805 Msa0870610:CDS 40.0%
TTCAACTCAATGACACACGT+TGG - chr6_1:5136861-5136880 Msa0870610:CDS 40.0%
TAAGAAAAGGGAGAAGGTTG+AGG - chr6_1:5136977-5136996 Msa0870610:CDS 40.0%
!! TGAAGTTGGTTGGTTTGATG+AGG - chr6_1:5137310-5137329 Msa0870610:intron 40.0%
ACATACCACATTGGCATCTT+TGG + chr6_1:5137372-5137391 None:intergenic 40.0%
ACCATAGTGTAGTAAGATGG+GGG - chr6_1:5137490-5137509 Msa0870610:intron 40.0%
!! ACAGCTTTTGAGTCGACTAT+GGG + chr6_1:5137712-5137731 None:intergenic 40.0%
AGCCACCGTAATTCACATAA+GGG + chr6_1:5137768-5137787 None:intergenic 40.0%
AAGCCACCGTAATTCACATA+AGG + chr6_1:5137769-5137788 None:intergenic 40.0%
ATCACAATGCACAAGGTAGA+CGG + chr6_1:5137992-5138011 None:intergenic 40.0%
AACACAGGTAAGATCATTGG+TGG - chr6_1:5138043-5138062 Msa0870610:CDS 40.0%
ACACAGGTAAGATCATTGGT+GGG - chr6_1:5138044-5138063 Msa0870610:CDS 40.0%
! ATCATTGGTGGGTGATAGAT+TGG - chr6_1:5138055-5138074 Msa0870610:CDS 40.0%
TATGTCAAGCAAAGCCATCA+AGG - chr6_1:5138220-5138239 Msa0870610:CDS 40.0%
!! ATTAGACAGTCTTGGTTTGC+AGG - chr6_1:5138371-5138390 Msa0870610:intron 40.0%
!! AGTCTTGGTTTGCAGGTATT+GGG - chr6_1:5138378-5138397 Msa0870610:intron 40.0%
TGTGTCGCAAGGTTATATCT+CGG - chr6_1:5138466-5138485 Msa0870610:intron 40.0%
ATGACGAGTGATCTTGCTAA+AGG - chr6_1:5138557-5138576 Msa0870610:intron 40.0%
TTGTAACCTCTCAAGTCATC+CGG + chr6_1:5138638-5138657 None:intergenic 40.0%
ATCATCACATTAGGTCTAGC+CGG + chr6_1:5138713-5138732 None:intergenic 40.0%
GATACATTGTGTGGTGATAG+AGG - chr6_1:5139073-5139092 Msa0870610:intron 40.0%
GATAGAGGAGTTCAACTTAG+TGG - chr6_1:5139088-5139107 Msa0870610:intron 40.0%
!! GCTTTAGAAAGGGTTATGGT+TGG - chr6_1:5139226-5139245 Msa0870610:intron 40.0%
TAGAAAGGGTTATGGTTGGA+AGG - chr6_1:5139230-5139249 Msa0870610:intron 40.0%
!! AAGGGAAGTGTTGTTGAGAA+AGG - chr6_1:5139319-5139338 Msa0870610:intron 40.0%
TTGAGGAGGTTTAGGGAAAT+TGG - chr6_1:5139550-5139569 Msa0870610:CDS 40.0%
GCTCCCACCTTGAAAATAAT+GGG - chr6_1:5139745-5139764 Msa0870610:CDS 40.0%
!! TTGATTGGTGCCATTGGTGA+TGG - chr6_1:5132801-5132820 Msa0870610:three_prime_UTR 45.0%
AAGCAGCAAGAATGAGAGCT+AGG - chr6_1:5133406-5133425 Msa0870610:CDS 45.0%
!! AATACTCTAAGGCCTGAGTC+TGG - chr6_1:5133744-5133763 Msa0870610:CDS 45.0%
TCAGGTAATAGACCAGACTC+AGG + chr6_1:5133759-5133778 None:intergenic 45.0%
TATGCTTTCGGGCATAAGTC+AGG + chr6_1:5133807-5133826 None:intergenic 45.0%
ATGCTGCTATGTAGCTTCCA+AGG + chr6_1:5134133-5134152 None:intergenic 45.0%
! GGTTTTGCTTTCTCCTGCAA+AGG + chr6_1:5134330-5134349 None:intergenic 45.0%
CAAGGCTTAGCTAAAGGCTT+AGG - chr6_1:5134401-5134420 Msa0870610:intron 45.0%
TGCACGTAGTTGGCCATATT+TGG - chr6_1:5134874-5134893 Msa0870610:intron 45.0%
! CAATGTACCGATCACAAGTG+CGG - chr6_1:5135033-5135052 Msa0870610:intron 45.0%
TCCTTATGAGACAGGGCTTT+CGG - chr6_1:5135201-5135220 Msa0870610:CDS 45.0%
! AATGCCACTGTTTTCCCTGA+TGG + chr6_1:5135441-5135460 None:intergenic 45.0%
GGGAAAACAGTGGCATTAGT+AGG - chr6_1:5135444-5135463 Msa0870610:CDS 45.0%
TTAGTAGGAGGAAGTGGTTC+AGG - chr6_1:5135459-5135478 Msa0870610:CDS 45.0%
GGTGGAGAGATTCTTCTTGA+TGG - chr6_1:5135528-5135547 Msa0870610:CDS 45.0%
GCCACAAGGATATGATACTC+AGG - chr6_1:5135734-5135753 Msa0870610:CDS 45.0%
AGAGGGGAGTTCAAATGTCA+GGG - chr6_1:5136448-5136467 Msa0870610:intron 45.0%
! CAGCTTTGTCTAGAGCTTCT+TGG + chr6_1:5136581-5136600 None:intergenic 45.0%
TTGAGGTTCCATCGTTTCGA+AGG - chr6_1:5136994-5137013 Msa0870610:CDS 45.0%
TCCATCGTTTCGAAGGTTGT+TGG - chr6_1:5137001-5137020 Msa0870610:CDS 45.0%
GAAGGTTGTTGGCCATGAAT+GGG - chr6_1:5137012-5137031 Msa0870610:CDS 45.0%
AGAGTGGAAGCAAGCATGTT+TGG - chr6_1:5137037-5137056 Msa0870610:CDS 45.0%
GAGTGGAAGCAAGCATGTTT+GGG - chr6_1:5137038-5137057 Msa0870610:CDS 45.0%
!!! TGCGTTTTGTTTCCTAGGGT+TGG - chr6_1:5137178-5137197 Msa0870610:CDS 45.0%
TTGAGATAACAGCCAACCCT+AGG + chr6_1:5137193-5137212 None:intergenic 45.0%
!! AGGGTTGGCTGTTATCTCAA+TGG - chr6_1:5137193-5137212 Msa0870610:CDS 45.0%
!! TGGGAGAGTACTTGACTAAG+AGG - chr6_1:5137252-5137271 Msa0870610:intron 45.0%
!! GGGAGAGTACTTGACTAAGA+GGG - chr6_1:5137253-5137272 Msa0870610:intron 45.0%
ACTTGCCAAAGATGCCAATG+TGG - chr6_1:5137364-5137383 Msa0870610:intron 45.0%
TCCCCCATCTTACTACACTA+TGG + chr6_1:5137494-5137513 None:intergenic 45.0%
!! CACAGCTTTTGAGTCGACTA+TGG + chr6_1:5137713-5137732 None:intergenic 45.0%
! TAGTCGACTCAAAAGCTGTG+CGG - chr6_1:5137713-5137732 Msa0870610:intron 45.0%
GGGCACCCTTATGTGAATTA+CGG - chr6_1:5137760-5137779 Msa0870610:intron 45.0%
CACCCTTATGTGAATTACGG+TGG - chr6_1:5137763-5137782 Msa0870610:intron 45.0%
TCACAATGCACAAGGTAGAC+GGG + chr6_1:5137991-5138010 None:intergenic 45.0%
CAATGGGCCTAATCATTGCA+TGG - chr6_1:5138120-5138139 Msa0870610:CDS 45.0%
CCAGTCTCCATGCAATGATT+AGG + chr6_1:5138130-5138149 None:intergenic 45.0%
CCTAATCATTGCATGGAGAC+TGG - chr6_1:5138127-5138146 Msa0870610:CDS 45.0%
ACACTGATCTTGAGCCTTGA+TGG + chr6_1:5138237-5138256 None:intergenic 45.0%
ATGCTTGAAAAGGCCCAACA+AGG - chr6_1:5138332-5138351 Msa0870610:CDS 45.0%
!! CAGTCTTGGTTTGCAGGTAT+TGG - chr6_1:5138377-5138396 Msa0870610:intron 45.0%
!!! CTACTTGGGCTTTGGACTTT+TGG - chr6_1:5138429-5138448 Msa0870610:intron 45.0%
!!! TGGGCTTTGGACTTTTGGTA+TGG - chr6_1:5138434-5138453 Msa0870610:intron 45.0%
!! GCTTTGGACTTTTGGTATGG+TGG - chr6_1:5138437-5138456 Msa0870610:intron 45.0%
GCAAGGTTATATCTCGGCTA+AGG - chr6_1:5138472-5138491 Msa0870610:intron 45.0%
GGAAGAGTTATTGCTGATGC+CGG - chr6_1:5138530-5138549 Msa0870610:intron 45.0%
AAGATCACTCGTCATGCTAC+CGG + chr6_1:5138552-5138571 None:intergenic 45.0%
GATTGCGAAAACCGATCCAA+TGG + chr6_1:5138591-5138610 None:intergenic 45.0%
GTAAATCGACCGCTTTGGTA+GGG - chr6_1:5138765-5138784 Msa0870610:intron 45.0%
TAAATCGACCGCTTTGGTAG+GGG - chr6_1:5138766-5138785 Msa0870610:intron 45.0%
AGAGGAGTTCAACTTAGTGG+TGG - chr6_1:5139091-5139110 Msa0870610:intron 45.0%
!!! GAATCCAGAGGTGTTGCTTT+TGG - chr6_1:5139153-5139172 Msa0870610:intron 45.0%
TCATCCAAAAGCAACACCTC+TGG + chr6_1:5139160-5139179 None:intergenic 45.0%
TGGAAGGACAAGTGTAGTTG+TGG - chr6_1:5139246-5139265 Msa0870610:intron 45.0%
TTGTTGTCAAAAGGGCCAAG+TGG - chr6_1:5139355-5139374 Msa0870610:intron 45.0%
GGCTCCCACCTTGAAAATAA+TGG - chr6_1:5139744-5139763 Msa0870610:CDS 45.0%
TCTGATCAGCACCACCCATT+TGG + chr6_1:5132683-5132702 None:intergenic 50.0%
CTTGCATTCCGGCTAAACTC+TGG - chr6_1:5132989-5133008 Msa0870610:three_prime_UTR 50.0%
TAGGCTGTCGTTAGAGACAC+TGG + chr6_1:5133505-5133524 None:intergenic 50.0%
GGCTTAGGCATAGGAAGCAA+TGG - chr6_1:5134416-5134435 Msa0870610:intron 50.0%
GGCGGTACCGTTTATTCAGT+TGG - chr6_1:5134509-5134528 Msa0870610:intron 50.0%
TCCGAAAGCCCTGTCTCATA+AGG + chr6_1:5135205-5135224 None:intergenic 50.0%
GGTTCCATCAGGGAAAACAG+TGG - chr6_1:5135434-5135453 Msa0870610:CDS 50.0%
GTGGCATTAGTAGGAGGAAG+TGG - chr6_1:5135453-5135472 Msa0870610:CDS 50.0%
! TACTACTACAGGTTGGGGAG+AGG - chr6_1:5136430-5136449 Msa0870610:intron 50.0%
! ACTACTACAGGTTGGGGAGA+GGG - chr6_1:5136431-5136450 Msa0870610:intron 50.0%
GAGAGGGGAGTTCAAATGTC+AGG - chr6_1:5136447-5136466 Msa0870610:intron 50.0%
GAGGGGAGTTCAAATGTCAG+GGG - chr6_1:5136449-5136468 Msa0870610:intron 50.0%
AGGGGAGTTCAAATGTCAGG+GGG - chr6_1:5136450-5136469 Msa0870610:intron 50.0%
! GCTCTAGACAAAGCTGCAGT+TGG - chr6_1:5136585-5136604 Msa0870610:intron 50.0%
TAAGCGGTGAGCGATGATGA+TGG + chr6_1:5136619-5136638 None:intergenic 50.0%
TCGTTGGAAACGAACAAGGG+AGG + chr6_1:5136745-5136764 None:intergenic 50.0%
GCCAACAACCTTCGAAACGA+TGG + chr6_1:5137005-5137024 None:intergenic 50.0%
CGAAGGTTGTTGGCCATGAA+TGG - chr6_1:5137011-5137030 Msa0870610:CDS 50.0%
CTTCCACTCTAGCCCATTCA+TGG + chr6_1:5137027-5137046 None:intergenic 50.0%
!! TTCAAGACTCGGGCCTTGTT+GGG + chr6_1:5138348-5138367 None:intergenic 50.0%
! TTTCAAGACTCGGGCCTTGT+TGG + chr6_1:5138349-5138368 None:intergenic 50.0%
GGTGGAAAACTTGTGTCGCA+AGG - chr6_1:5138455-5138474 Msa0870610:intron 50.0%
! GCTAAAGGCTCTGATGCCAT+TGG - chr6_1:5138572-5138591 Msa0870610:intron 50.0%
! AGGCTCTGATGCCATTGGAT+CGG - chr6_1:5138577-5138596 Msa0870610:intron 50.0%
! CGGTTTTCGCAATCCTCGAT+AGG - chr6_1:5138597-5138616 Msa0870610:intron 50.0%
ATCAAGCCGGATGACTTGAG+AGG - chr6_1:5138629-5138648 Msa0870610:intron 50.0%
TGCTGGTAAATCGACCGCTT+TGG - chr6_1:5138760-5138779 Msa0870610:intron 50.0%
GGTAAATCGACCGCTTTGGT+AGG - chr6_1:5138764-5138783 Msa0870610:intron 50.0%
ACCACTTTCCCCTACCAAAG+CGG + chr6_1:5138777-5138796 None:intergenic 50.0%
TTGGTAGGGGAAAGTGGTTC+TGG - chr6_1:5138779-5138798 Msa0870610:intron 50.0%
CAAGTGTAGTTGTGGCGCAT+AGG - chr6_1:5139254-5139273 Msa0870610:intron 50.0%
ACTCCACGACTGCACGTAGT+TGG - chr6_1:5134864-5134883 Msa0870610:intron 55.0%
GCAGTGTGACTGCACGCAAT+AGG + chr6_1:5134999-5135018 None:intergenic 55.0%
GGCAAGACCGCACTTGTGAT+CGG + chr6_1:5135043-5135062 None:intergenic 55.0%
CAAGTGCGGTCTTGCCATCA+TGG - chr6_1:5135047-5135066 Msa0870610:intron 55.0%
TTCTCGGAAGCAAGTGCAGC+AGG - chr6_1:5135249-5135268 Msa0870610:CDS 55.0%
! CTACTACAGGTTGGGGAGAG+GGG - chr6_1:5136432-5136451 Msa0870610:intron 55.0%
!! TGGCCATGAATGGGCTAGAG+TGG - chr6_1:5137021-5137040 Msa0870610:CDS 55.0%
ACCGCTTTGGTAGGGGAAAG+TGG - chr6_1:5138773-5138792 Msa0870610:intron 55.0%
TGGCCAACTACGTGCAGTCG+TGG + chr6_1:5134870-5134889 None:intergenic 60.0%
TGAGACAGGGCTTTCGGAGC+TGG - chr6_1:5135207-5135226 Msa0870610:CDS 60.0%
!! GCGGTGAGCGATGATGATGG+TGG + chr6_1:5136616-5136635 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr6_1 gene 5132679 5139783 5132679 ID=Msa0870610;Name=Msa0870610
chr6_1 mRNA 5132679 5139783 5132679 ID=Msa0870610-mRNA-1;Parent=Msa0870610;Name=Msa0870610-mRNA-1;_AED=0.03;_eAED=0.03;_QI=5|1|1|1|0.83|0.85|7|330|1274
chr6_1 exon 5132679 5134412 5132679 ID=Msa0870610-mRNA-1:exon:1653;Parent=Msa0870610-mRNA-1
chr6_1 exon 5135077 5136021 5135077 ID=Msa0870610-mRNA-1:exon:1652;Parent=Msa0870610-mRNA-1
chr6_1 exon 5136707 5137247 5136707 ID=Msa0870610-mRNA-1:exon:1651;Parent=Msa0870610-mRNA-1
chr6_1 exon 5137907 5138364 5137907 ID=Msa0870610-mRNA-1:exon:1650;Parent=Msa0870610-mRNA-1
chr6_1 exon 5138911 5139089 5138911 ID=Msa0870610-mRNA-1:exon:1649;Parent=Msa0870610-mRNA-1
chr6_1 exon 5139179 5139233 5139179 ID=Msa0870610-mRNA-1:exon:1648;Parent=Msa0870610-mRNA-1
chr6_1 exon 5139536 5139783 5139536 ID=Msa0870610-mRNA-1:exon:1647;Parent=Msa0870610-mRNA-1
chr6_1 five_prime_UTR 5139779 5139783 5139779 ID=Msa0870610-mRNA-1:five_prime_utr;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5139536 5139778 5139536 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5139179 5139233 5139179 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5138911 5139089 5138911 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5137907 5138364 5137907 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5136707 5137247 5136707 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5135077 5136021 5135077 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 CDS 5133009 5134412 5133009 ID=Msa0870610-mRNA-1:cds;Parent=Msa0870610-mRNA-1
chr6_1 three_prime_UTR 5132679 5133008 5132679 ID=Msa0870610-mRNA-1:three_prime_utr;Parent=Msa0870610-mRNA-1
Gene Sequence

>Msa0870610

ATGGGTGGTGCTGATCAGAAAAATGTTTGCATTGCTAAGAAGAAGAAGAAAAATGGTTCTTTTAAGTCCATTTTCATGCATGCAGATGCTATTGATTGGTTTTTCATGGTTTTTGGTTTGATTGGTGCCATTGGTGATGGCATATCAGTTCCTTTGTTGTTGTTTATTGCAGGCAGACTTATGAACTCTATTGGTAGTGCTTCTGGCACATCAAGCAACAATTTTGTCCATGACATCAATAAGAATGCTGTTCTTTTTTTATATTTGGCATGTGCCTCTTTTGTTGCTTGCTTCTTTGAGGGTTATTGTTGGACAAGAACAGGTGAAAGACAAGCAGCAAGAATGAGAGCTAGGTACTTAAAAGCAGTTCTAAGACAAGAAGTAGCATACTTTGATTTGCATGTTACAAGCACATCAGAAGTCATCACCAGTGTCTCTAACGACAGCCTAGTGATTCAAGATGTTCTTAGTGAAAAGGTTCCAAATTTTTTGATGAATGCATCTATGTTCCTTGGAAGCTACATAGCAGCATTTGCATTGTTATGGAGATTGGCAATTGTTGGGTTCCCTTTTTTGGTAGTACTAGTGATTCCTGGTTTCATGTATGGAAGAATTTCAATGGGATTGGCTAGAAAAATTAGAGAAGAGTACAATAAAGCCGGTACAATAGCAGAACAAGCAATATCTTCAATTAGAACGGTTTATTCCTTTGCAGGAGAAAGCAAAACCATAACTGCTTTCTCTAATGCTTTGGAAGGATCAGTGAAGTTGGGATTGAAACAAGGCTTAGCTAAAGGCTTAGGCATAGGAAGCAATGGTCTTGTTTTTGCTGTATGGTCTTTGATATCCTATTATGGTAGCAGAATGGTCATGTATCATGGTGCTAAAGGCGGTACCGTTTATTCAGTTGGAATTTCAATAACACTTGGAGGATTGGCTTTCGGAGCTGGTTTATCAAATGTGAAGTACTTCTCGGAAGCAAGTGCAGCAGGAGAAAGAATAATGGAAATGATAAAACAAGTTCCAAAGATTGATTCTGAAAATATGGAAGGTGAAATTCTAGAGAAAGTGTCGGGGGAAGTTGAATTCAACCATGTTGAATTTGCGTATCCATCAAGACCAGAAAGTGTGATCTTAAATGATTTTTGCTTAAAGGTTCCATCAGGGAAAACAGTGGCATTAGTAGGAGGAAGTGGTTCAGGAAAATCAACAGTTGTATCACTTTTGCAAAGATTTTATGATCCAATTGGTGGAGAGATTCTTCTTGATGGAGTTGCTATTCATAAGTTGCAATTAAAGTGGCTTAGGTCTCAAATGGGTTTAGTAAGTCAAGAACCTGCTTTGTTTGCAACAAGTATTAAGGAGAATATACTTTTTGGAAGAGAGGATGCTACATTTGAAGAAATTGTGGATGCTGCTAAAGCTTCTAATGCTCATAATTTCATTTCATTGTTGCCACAAGGATATGATACTCAGGTTGGGGAGAGGGGAGTTCAAATGTCAGGGGGCCAAAAGCAAAGAATTGCAATTGCAAGAGCCATCATAAAAATGCCAAAAATTCTATTGTTAGACGAAGCAACAAGTGCACTCGATTCTGAATCTGAACGAGTCGTCCAAGAAGCTCTAGACAAAGCTGCAGTTGGACGCACCACCATCATCATCGCTCACCGCTTATCTACCATCCAAAATGCTGATATTATTGCGGTCGTTCAAAATGGTCTGGTCATGGAAACGGGATCTCACGAAAGCCTCATGAAAAATGACAATTCTCTTTACACCTCCCTTGTTCGTTTCCAACGAACTAGAAATGACCAAAGTGATGACACTCCATCTATCATGAATGGAGATCACATGCAAAACACGAGTAGTCGTAGACTTGTGAGTCATTCTAGCTCTTTCAACTCAATGACACACGTTGGTGATGATATCGCTAATTATAACAATGTTGTTGAAGATGTTGTTAATAATGATGTTGTAGTTGATGATCACAATAATAATGATCATAAGTACAATAAGAAAAGGGAGAAGGTTGAGGTTCCATCGTTTCGAAGGTTGTTGGCCATGAATGGGCTAGAGTGGAAGCAAGCATGTTTGGGTTGTTTTAATGCGGTTTTATTTGGTGCGATTCAACCTATATATTCTTTTGCAATGGGGTCGGTTATATCAGTTTTTCTGGAGGACCATGATGAGATCAAGAAGCAAATTAGGATCTATGCGTTTTGTTTCCTAGGGTTGGCTGTTATCTCAATGGTTGTTAATGTGCTTCAACATTATAGCTTTGCTTACATGGGAGAGTACTTGACTAAGAGGGTTAGAGAAAGAATGTTTACCAAGATACTCACTTTTGAAGTTGGTTGGTTTGATGAGGATCAAAATTCTACAGGTTCTGTTTGCTCTAGACTTGCCAAAGATGCCAATGTGGTAAGATCATTGGTGGGTGATAGATTGGCTCTAGTAGTACAAACAATTTCAGCAGTGGTAATAGCATTCACAATGGGCCTAATCATTGCATGGAGACTGGCCATTGTTATGATAGCAGTTCAACCACTTATCATTTGTTGTTTCTACACAAGGCGTGTCCTTCTTAAGAATATGTCAAGCAAAGCCATCAAGGCTCAAGATCAGTGTAGCAAAATAGCTGCTGAAGCTGTTTCAAATCTAAGAACCATCAATGCTTTTTCATCTCAAGATAGAATTCTCAAAATGCTTGAAAAGGCCCAACAAGGCCCGAGTCTTGAAAATATTAGACAGTCTTGGTTTGCAGGTATTGGGCTTGCATGTTCGCAATGTCTCAATTATTCTACTTGGGCTTTGGACTTTTGGTATGGTGGAAAACTTGTGTCGCAAGGTTATATCTCGGCTAAGGCGTTATTTGAGACTTTTATGATTTTGGTAAGTACAGGAAGAGTTATTGCTGATGCCGGTAGCATGACGAGTGATCTTGCTAAAGGCTCTGATGCCATTGGATCGGTTTTCGCAATCCTCGATAGGTATACAAAAATCAAGCCGGATGACTTGAGAGGTTACAAAGCTGAAAAATTAATAGGAATCATTGAACTTTTTGATGTACATTTTGCATATCCGGCTAGACCTAATGTGATGATTTTTCAAGGGTTCTCGATTAAAATTGATGCTGGTAAATCGACCGCTTTGGTAGGGGAAAGTGGTTCTGGAAAATCAACAATCATAGGACTTATTGAGAGATTCTACGATCCACTTAAAGGGATAGTGACAATTGATGGTAGAGACATAAAGACTTATAATCTAAGGTCATTAAGGAGACACATTGCACTTGTGAGTCAAGAACCAACATTGTTTAGTGGTACCATAAGGGAAAATATTGCATATGGAGCTTATGATGATAAGGTTGATGAGAATGAAATTATAGAGGCATCAAAGGCTGCAAGTGCTCATGATTTTATATCAAGCTTAAAAGATGGTTATGATACATTGTGTGGTGATAGAGGAGTTCAACTTAGTGGTGGTCAAAAACAAAGAATTGCAATAGCTAGAGCTATATTGAAGAATCCAGAGGTGTTGCTTTTGGATGAAGCAACAAGTGCACTTGATAGTCAATCAGAGAACTTAGTCCAAAATGCTTTAGAAAGGGTTATGGTTGGAAGGACAAGTGTAGTTGTGGCGCATAGGTTGAGTACTATACAAAATTGTGATTTGATTGCTGTTTTGGATAAGGGAAGTGTTGTTGAGAAAGGAACACATTCATCTTTGTTGTCAAAAGGGCCAAGTGGTGCTTATTACTCTTTAGTAAGTCTGCAAAGAAGACCAAACAATTTAATTTCTGATTCTTCACAAGAAATCAACTAA
Protein sequence

>Msa0870610

MGGADQKNVCIAKKKKKNGSFKSIFMHADAIDWFFMVFGLIGAIGDGISVPLLLFIAGRLMNSIGSASGTSSNNFVHDINKNAVLFLYLACASFVACFFEGYCWTRTGERQAARMRARYLKAVLRQEVAYFDLHVTSTSEVITSVSNDSLVIQDVLSEKVPNFLMNASMFLGSYIAAFALLWRLAIVGFPFLVVLVIPGFMYGRISMGLARKIREEYNKAGTIAEQAISSIRTVYSFAGESKTITAFSNALEGSVKLGLKQGLAKGLGIGSNGLVFAVWSLISYYGSRMVMYHGAKGGTVYSVGISITLGGLAFGAGLSNVKYFSEASAAGERIMEMIKQVPKIDSENMEGEILEKVSGEVEFNHVEFAYPSRPESVILNDFCLKVPSGKTVALVGGSGSGKSTVVSLLQRFYDPIGGEILLDGVAIHKLQLKWLRSQMGLVSQEPALFATSIKENILFGREDATFEEIVDAAKASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKMPKILLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIQNADIIAVVQNGLVMETGSHESLMKNDNSLYTSLVRFQRTRNDQSDDTPSIMNGDHMQNTSSRRLVSHSSSFNSMTHVGDDIANYNNVVEDVVNNDVVVDDHNNNDHKYNKKREKVEVPSFRRLLAMNGLEWKQACLGCFNAVLFGAIQPIYSFAMGSVISVFLEDHDEIKKQIRIYAFCFLGLAVISMVVNVLQHYSFAYMGEYLTKRVRERMFTKILTFEVGWFDEDQNSTGSVCSRLAKDANVVRSLVGDRLALVVQTISAVVIAFTMGLIIAWRLAIVMIAVQPLIICCFYTRRVLLKNMSSKAIKAQDQCSKIAAEAVSNLRTINAFSSQDRILKMLEKAQQGPSLENIRQSWFAGIGLACSQCLNYSTWALDFWYGGKLVSQGYISAKALFETFMILVSTGRVIADAGSMTSDLAKGSDAIGSVFAILDRYTKIKPDDLRGYKAEKLIGIIELFDVHFAYPARPNVMIFQGFSIKIDAGKSTALVGESGSGKSTIIGLIERFYDPLKGIVTIDGRDIKTYNLRSLRRHIALVSQEPTLFSGTIRENIAYGAYDDKVDENEIIEASKAASAHDFISSLKDGYDTLCGDRGVQLSGGQKQRIAIARAILKNPEVLLLDEATSALDSQSENLVQNALERVMVGRTSVVVAHRLSTIQNCDLIAVLDKGSVVEKGTHSSLLSKGPSGAYYSLVSLQRRPNNLISDSSQEIN*