Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154460 | XP_003589749.1 | 85.619 | 452 | 9 | 3 | 1 | 396 | 1 | 452 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154460 | sp|Q9SIS4|IP5P9_ARATH | 56.968 | 409 | 125 | 6 | 9 | 373 | 1 | 402 | 1.83e-154 | 445 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154460 | G7IBG6 | 85.619 | 452 | 9 | 3 | 1 | 396 | 1 | 452 | 0.0 | 768 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013270 | Msa0154460 | 0.814156 | 1.777851e-51 | -8.615850e-47 |
| Msa0014590 | Msa0154460 | 0.882037 | 1.456661e-70 | -8.615850e-47 |
| Msa0025570 | Msa0154460 | 0.821420 | 4.076692e-53 | -8.615850e-47 |
| Msa0045810 | Msa0154460 | 0.803889 | 2.810562e-49 | -8.615850e-47 |
| Msa0062190 | Msa0154460 | 0.803527 | 3.340676e-49 | -8.615850e-47 |
| Msa0063540 | Msa0154460 | 0.867167 | 1.670942e-65 | -8.615850e-47 |
| Msa0073110 | Msa0154460 | 0.826710 | 2.336429e-54 | -8.615850e-47 |
| Msa0106540 | Msa0154460 | 0.827851 | 1.244800e-54 | -8.615850e-47 |
| Msa0108350 | Msa0154460 | 0.902319 | 1.095199e-78 | -8.615850e-47 |
| Msa0120450 | Msa0154460 | 0.804617 | 1.982195e-49 | -8.615850e-47 |
| Msa0121320 | Msa0154460 | 0.810861 | 9.336571e-51 | -8.615850e-47 |
| Msa0125600 | Msa0154460 | 0.804021 | 2.638687e-49 | -8.615850e-47 |
| Msa0134570 | Msa0154460 | 0.808851 | 2.528004e-50 | -8.615850e-47 |
| Msa0150920 | Msa0154460 | 0.826816 | 2.204651e-54 | -8.615850e-47 |
| Msa0154460 | Msa0166180 | 0.808608 | 2.849231e-50 | -8.615850e-47 |
| Msa0154460 | Msa0190670 | 0.835307 | 1.811046e-56 | -8.615850e-47 |
| Msa0154460 | Msa0190890 | 0.814956 | 1.182885e-51 | -8.615850e-47 |
| Msa0154460 | Msa0194230 | 0.811261 | 7.647549e-51 | -8.615850e-47 |
| Msa0154460 | Msa0195580 | 0.805279 | 1.441284e-49 | -8.615850e-47 |
| Msa0154460 | Msa0196260 | 0.803641 | 3.163462e-49 | -8.615850e-47 |
| Msa0154460 | Msa0207640 | 0.828888 | 6.999861e-55 | -8.615850e-47 |
| Msa0154460 | Msa0209320 | 0.828427 | 9.045174e-55 | -8.615850e-47 |
| Msa0154460 | Msa0233210 | 0.807619 | 4.627049e-50 | -8.615850e-47 |
| Msa0154460 | Msa0238110 | 0.826238 | 3.027402e-54 | -8.615850e-47 |
| Msa0154460 | Msa0242830 | 0.811650 | 6.295999e-51 | -8.615850e-47 |
| Msa0154460 | Msa0261400 | 0.810225 | 1.281516e-50 | -8.615850e-47 |
| Msa0154460 | Msa0269240 | 0.814354 | 1.607817e-51 | -8.615850e-47 |
| Msa0154460 | Msa0274250 | 0.817091 | 3.946330e-52 | -8.615850e-47 |
| Msa0154460 | Msa0278460 | 0.837090 | 6.381517e-57 | -8.615850e-47 |
| Msa0154460 | Msa0281190 | 0.813188 | 2.904034e-51 | -8.615850e-47 |
| Msa0154460 | Msa0287630 | 0.804890 | 1.738754e-49 | -8.615850e-47 |
| Msa0154460 | Msa0307630 | 0.800520 | 1.387127e-48 | -8.615850e-47 |
| Msa0154460 | Msa0314440 | 0.806628 | 7.501462e-50 | -8.615850e-47 |
| Msa0154460 | Msa0328090 | 0.835525 | 1.594874e-56 | -8.615850e-47 |
| Msa0154460 | Msa0348370 | 0.802597 | 5.202799e-49 | -8.615850e-47 |
| Msa0154460 | Msa0349910 | 0.829212 | 5.839385e-55 | -8.615850e-47 |
| Msa0154460 | Msa0366510 | 0.840965 | 6.328510e-58 | -8.615850e-47 |
| Msa0154460 | Msa0370620 | 0.822432 | 2.376198e-53 | -8.615850e-47 |
| Msa0154460 | Msa0374040 | 0.837492 | 5.033926e-57 | -8.615850e-47 |
| Msa0154460 | Msa0379480 | 0.810832 | 9.472968e-51 | -8.615850e-47 |
| Msa0154460 | Msa0390160 | 0.800918 | 1.150429e-48 | -8.615850e-47 |
| Msa0154460 | Msa0396860 | 0.839044 | 2.004809e-57 | -8.615850e-47 |
| Msa0154460 | Msa0414480 | 0.810661 | 1.031713e-50 | -8.615850e-47 |
| Msa0154460 | Msa0418160 | 0.832683 | 8.218985e-56 | -8.615850e-47 |
| Msa0154460 | Msa0444210 | 0.806275 | 8.903955e-50 | -8.615850e-47 |
| Msa0154460 | Msa0457070 | -0.800922 | 1.148103e-48 | -8.615850e-47 |
| Msa0154460 | Msa0464310 | 0.820436 | 6.868061e-53 | -8.615850e-47 |
| Msa0154460 | Msa0469450 | 0.803513 | 3.363291e-49 | -8.615850e-47 |
| Msa0154460 | Msa0507600 | 0.807113 | 5.924046e-50 | -8.615850e-47 |
| Msa0154460 | Msa0515130 | 0.821181 | 4.627393e-53 | -8.615850e-47 |
| Msa0154460 | Msa0515150 | 0.816698 | 4.834790e-52 | -8.615850e-47 |
| Msa0154460 | Msa0535570 | 0.833102 | 6.467710e-56 | -8.615850e-47 |
| Msa0154460 | Msa0538440 | 0.808057 | 3.734469e-50 | -8.615850e-47 |
| Msa0154460 | Msa0538530 | 0.809011 | 2.335560e-50 | -8.615850e-47 |
| Msa0154460 | Msa0549960 | 0.804094 | 2.547477e-49 | -8.615850e-47 |
| Msa0154460 | Msa0565700 | 0.800922 | 1.147927e-48 | -8.615850e-47 |
| Msa0154460 | Msa0591490 | 0.819621 | 1.055007e-52 | -8.615850e-47 |
| Msa0154460 | Msa0593870 | 0.809745 | 1.625356e-50 | -8.615850e-47 |
| Msa0154460 | Msa0606600 | 0.801499 | 8.750468e-49 | -8.615850e-47 |
| Msa0154460 | Msa0610190 | 0.801438 | 9.002487e-49 | -8.615850e-47 |
| Msa0154460 | Msa0616300 | 0.820724 | 5.896984e-53 | -8.615850e-47 |
| Msa0154460 | Msa0631700 | 0.816017 | 6.867769e-52 | -8.615850e-47 |
| Msa0154460 | Msa0633940 | 0.803429 | 3.500284e-49 | -8.615850e-47 |
| Msa0154460 | Msa0634290 | 0.806217 | 9.156178e-50 | -8.615850e-47 |
| Msa0154460 | Msa0639410 | 0.802819 | 4.681846e-49 | -8.615850e-47 |
| Msa0154460 | Msa0646010 | 0.807458 | 5.005044e-50 | -8.615850e-47 |
| Msa0154460 | Msa0647300 | 0.805267 | 1.450022e-49 | -8.615850e-47 |
| Msa0154460 | Msa0655800 | 0.826159 | 3.160849e-54 | -8.615850e-47 |
| Msa0154460 | Msa0670360 | 0.812430 | 4.256287e-51 | -8.615850e-47 |
| Msa0154460 | Msa0671640 | 0.801766 | 7.711113e-49 | -8.615850e-47 |
| Msa0154460 | Msa0686830 | 0.805720 | 1.164823e-49 | -8.615850e-47 |
| Msa0154460 | Msa0699170 | 0.803265 | 3.785353e-49 | -8.615850e-47 |
| Msa0154460 | Msa0708680 | 0.806216 | 9.162296e-50 | -8.615850e-47 |
| Msa0154460 | Msa0711260 | 0.809930 | 1.483355e-50 | -8.615850e-47 |
| Msa0154460 | Msa0715210 | 0.811811 | 5.806910e-51 | -8.615850e-47 |
| Msa0154460 | Msa0715220 | 0.821023 | 5.032749e-53 | -8.615850e-47 |
| Msa0154460 | Msa0739720 | 0.804158 | 2.470790e-49 | -8.615850e-47 |
| Msa0154460 | Msa0751960 | 0.834500 | 2.892244e-56 | -8.615850e-47 |
| Msa0154460 | Msa0757120 | 0.840801 | 6.984811e-58 | -8.615850e-47 |
| Msa0154460 | Msa0798150 | 0.804235 | 2.380550e-49 | -8.615850e-47 |
| Msa0154460 | Msa0803940 | 0.801256 | 9.810229e-49 | -8.615850e-47 |
| Msa0154460 | Msa0806930 | 0.818729 | 1.684002e-52 | -8.615850e-47 |
| Msa0154460 | Msa0814160 | 0.821732 | 3.453415e-53 | -8.615850e-47 |
| Msa0154460 | Msa0816140 | 0.817960 | 2.514241e-52 | -8.615850e-47 |
| Msa0154460 | Msa0822410 | 0.807613 | 4.639191e-50 | -8.615850e-47 |
| Msa0154460 | Msa0824850 | 0.820107 | 8.167359e-53 | -8.615850e-47 |
| Msa0154460 | Msa0824860 | 0.808212 | 3.459842e-50 | -8.615850e-47 |
| Msa0154460 | Msa0831890 | 0.817936 | 2.545660e-52 | -8.615850e-47 |
| Msa0154460 | Msa0854840 | 0.818864 | 1.569284e-52 | -8.615850e-47 |
| Msa0154460 | Msa0861730 | 0.824837 | 6.501183e-54 | -8.615850e-47 |
| Msa0154460 | Msa0863840 | 0.804764 | 1.846653e-49 | -8.615850e-47 |
| Msa0154460 | Msa0863850 | 0.803168 | 3.965060e-49 | -8.615850e-47 |
| Msa0154460 | Msa0863860 | 0.804204 | 2.417048e-49 | -8.615850e-47 |
| Msa0154460 | Msa0864160 | 0.809651 | 1.702911e-50 | -8.615850e-47 |
| Msa0154460 | Msa0867080 | 0.817171 | 3.787623e-52 | -8.615850e-47 |
| Msa0154460 | Msa0880910 | 0.814124 | 1.807882e-51 | -8.615850e-47 |
| Msa0154460 | Msa0893840 | 0.836707 | 7.990532e-57 | -8.615850e-47 |
| Msa0154460 | Msa0896910 | 0.804065 | 2.583449e-49 | -8.615850e-47 |
| Msa0154460 | Msa0896920 | 0.813305 | 2.737313e-51 | -8.615850e-47 |
| Msa0154460 | Msa0896950 | 0.809883 | 1.518096e-50 | -8.615850e-47 |
| Msa0154460 | Msa0932930 | 0.826855 | 2.157128e-54 | -8.615850e-47 |
| Msa0154460 | Msa0940780 | 0.800231 | 1.587911e-48 | -8.615850e-47 |
| Msa0154460 | Msa0967780 | 0.802224 | 6.208300e-49 | -8.615850e-47 |
| Msa0154460 | Msa0970270 | 0.812342 | 4.448125e-51 | -8.615850e-47 |
| Msa0154460 | Msa0970790 | 0.807048 | 6.113590e-50 | -8.615850e-47 |
| Msa0154460 | Msa1006030 | 0.800628 | 1.318564e-48 | -8.615850e-47 |
| Msa0154460 | Msa1006170 | 0.829182 | 5.937992e-55 | -8.615850e-47 |
| Msa0154460 | Msa1022490 | 0.826147 | 3.182705e-54 | -8.615850e-47 |
| Msa0154460 | Msa1022510 | 0.835910 | 1.274150e-56 | -8.615850e-47 |
| Msa0154460 | Msa1024350 | 0.804224 | 2.394026e-49 | -8.615850e-47 |
| Msa0154460 | Msa1029860 | 0.822691 | 2.068851e-53 | -8.615850e-47 |
| Msa0154460 | Msa1030320 | 0.829443 | 5.134343e-55 | -8.615850e-47 |
| Msa0154460 | Msa1041910 | 0.824717 | 6.937087e-54 | -8.615850e-47 |
| Msa0154460 | Msa1061670 | 0.805795 | 1.123563e-49 | -8.615850e-47 |
| Msa0154460 | Msa1064940 | 0.833008 | 6.823713e-56 | -8.615850e-47 |
| Msa0154460 | Msa1068730 | 0.824013 | 1.015827e-53 | -8.615850e-47 |
| Msa0154460 | Msa1068780 | 0.815742 | 7.911719e-52 | -8.615850e-47 |
| Msa0154460 | Msa1069350 | 0.803488 | 3.404521e-49 | -8.615850e-47 |
| Msa0154460 | Msa1075320 | 0.813049 | 3.116573e-51 | -8.615850e-47 |
| Msa0154460 | Msa1079820 | 0.817118 | 3.891565e-52 | -8.615850e-47 |
| Msa0154460 | Msa1087370 | 0.810851 | 9.384746e-51 | -8.615850e-47 |
| Msa0154460 | Msa1087380 | 0.800730 | 1.256758e-48 | -8.615850e-47 |
| Msa0154460 | Msa1103450 | 0.812472 | 4.167041e-51 | -8.615850e-47 |
| Msa0154460 | Msa1106680 | 0.843668 | 1.216006e-58 | -8.615850e-47 |
| Msa0154460 | Msa1106960 | 0.800526 | 1.383115e-48 | -8.615850e-47 |
| Msa0154460 | Msa1108560 | 0.811792 | 5.864390e-51 | -8.615850e-47 |
| Msa0154460 | Msa1120960 | 0.801425 | 9.059358e-49 | -8.615850e-47 |
| Msa0154460 | Msa1142600 | 0.810611 | 1.057535e-50 | -8.615850e-47 |
| Msa0154460 | Msa1147010 | 0.815915 | 7.237072e-52 | -8.615850e-47 |
| Msa0154460 | Msa1147030 | 0.813650 | 2.299180e-51 | -8.615850e-47 |
| Msa0154460 | Msa1156740 | 0.815340 | 9.722254e-52 | -8.615850e-47 |
| Msa0154460 | Msa1157210 | 0.820214 | 7.719878e-53 | -8.615850e-47 |
| Msa0154460 | Msa1162430 | 0.801272 | 9.736574e-49 | -8.615850e-47 |
| Msa0154460 | Msa1162750 | 0.816267 | 6.038582e-52 | -8.615850e-47 |
| Msa0154460 | Msa1167960 | 0.828444 | 8.961428e-55 | -8.615850e-47 |
| Msa0154460 | Msa1170340 | 0.851120 | 1.091336e-60 | -8.615850e-47 |
| Msa0154460 | Msa1181090 | 0.836930 | 7.010361e-57 | -8.615850e-47 |
| Msa0154460 | Msa1186340 | 0.809113 | 2.221205e-50 | -8.615850e-47 |
| Msa0154460 | Msa1186430 | 0.807347 | 5.285491e-50 | -8.615850e-47 |
| Msa0154460 | Msa1191350 | 0.803915 | 2.776071e-49 | -8.615850e-47 |
| Msa0154460 | Msa1223960 | 0.805179 | 1.512683e-49 | -8.615850e-47 |
| Msa0154460 | Msa1223990 | 0.814612 | 1.410002e-51 | -8.615850e-47 |
| Msa0154460 | Msa1236860 | -0.806233 | 9.085073e-50 | -8.615850e-47 |
| Msa0154460 | Msa1238250 | 0.800746 | 1.247443e-48 | -8.615850e-47 |
| Msa0154460 | Msa1263110 | 0.821853 | 3.237874e-53 | -8.615850e-47 |
| Msa0154460 | Msa1263120 | 0.810821 | 9.526299e-51 | -8.615850e-47 |
| Msa0154460 | Msa1267990 | 0.820563 | 6.420246e-53 | -8.615850e-47 |
| Msa0154460 | Msa1319190 | 0.805672 | 1.192471e-49 | -8.615850e-47 |
| Msa0154460 | Msa1321970 | 0.819324 | 1.232949e-52 | -8.615850e-47 |
| Msa0154460 | Msa1322500 | 0.819145 | 1.354046e-52 | -8.615850e-47 |
| Msa0154460 | Msa1355340 | 0.816756 | 4.692252e-52 | -8.615850e-47 |
| Msa0154460 | Msa1361980 | 0.827459 | 1.546690e-54 | -8.615850e-47 |
| Msa0154460 | Msa1380740 | 0.801890 | 7.273711e-49 | -8.615850e-47 |
| Msa0154460 | Msa1387480 | 0.812774 | 3.579846e-51 | -8.615850e-47 |
| Msa0154460 | Msa1405830 | 0.827908 | 1.206337e-54 | -8.615850e-47 |
| Msa0154460 | Msa1411550 | 0.828648 | 7.999110e-55 | -8.615850e-47 |
| Msa0154460 | Msa1421130 | 0.804345 | 2.258716e-49 | -8.615850e-47 |
| Msa0154460 | Msa1441450 | 0.813867 | 2.058992e-51 | -8.615850e-47 |
| Msa0154460 | Msa1455360 | 0.817002 | 4.132762e-52 | -8.615850e-47 |
| Msa0154460 | Msa1459610 | 0.814092 | 1.837222e-51 | -8.615850e-47 |
| Msa0154460 | Msa1461660 | 0.807092 | 5.982887e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154460 | MtrunA17_Chr1g0165011 | 85.619 | 452 | 9 | 3 | 1 | 396 | 1 | 452 | 0.0 | 768 |
| Msa0154460 | MtrunA17_Chr8g0375751 | 62.181 | 431 | 103 | 6 | 9 | 396 | 7 | 420 | 3.94e-179 | 504 |
| Msa0154460 | MtrunA17_Chr6g0479511 | 46.070 | 369 | 145 | 5 | 42 | 356 | 17 | 385 | 9.39e-111 | 330 |
| Msa0154460 | MtrunA17_Chr7g0263111 | 39.173 | 411 | 162 | 10 | 10 | 356 | 11 | 397 | 2.23e-81 | 256 |
| Msa0154460 | MtrunA17_Chr6g0452181 | 36.893 | 412 | 184 | 10 | 26 | 365 | 4 | 411 | 1.41e-76 | 244 |
| Msa0154460 | MtrunA17_Chr1g0185281 | 46.053 | 228 | 80 | 3 | 170 | 354 | 294 | 521 | 4.40e-61 | 206 |
| Msa0154460 | MtrunA17_Chr1g0185281 | 55.263 | 76 | 33 | 1 | 59 | 134 | 87 | 161 | 1.21e-18 | 87.8 |
| Msa0154460 | MtrunA17_Chr5g0394901 | 46.053 | 228 | 80 | 3 | 170 | 354 | 360 | 587 | 8.64e-61 | 207 |
| Msa0154460 | MtrunA17_Chr5g0394901 | 54.667 | 75 | 33 | 1 | 60 | 134 | 90 | 163 | 7.35e-18 | 85.5 |
| Msa0154460 | MtrunA17_Chr1g0205121 | 45.175 | 228 | 82 | 3 | 170 | 354 | 321 | 548 | 1.93e-59 | 202 |
| Msa0154460 | MtrunA17_Chr1g0205121 | 53.333 | 75 | 34 | 1 | 60 | 134 | 88 | 161 | 2.49e-18 | 87.0 |
| Msa0154460 | MtrunA17_Chr8g0355021 | 45.217 | 230 | 82 | 3 | 170 | 355 | 233 | 462 | 5.64e-59 | 199 |
| Msa0154460 | MtrunA17_Chr8g0355021 | 37.391 | 115 | 65 | 2 | 20 | 134 | 24 | 131 | 2.72e-15 | 77.4 |
| Msa0154460 | MtrunA17_Chr7g0260081 | 44.737 | 228 | 83 | 3 | 170 | 354 | 294 | 521 | 1.38e-58 | 199 |
| Msa0154460 | MtrunA17_Chr7g0260081 | 37.179 | 156 | 73 | 4 | 3 | 134 | 7 | 161 | 1.93e-18 | 87.0 |
| Msa0154460 | MtrunA17_Chr8g0382571 | 45.852 | 229 | 81 | 3 | 170 | 355 | 219 | 447 | 4.17e-58 | 196 |
| Msa0154460 | MtrunA17_Chr8g0382571 | 48.780 | 82 | 41 | 1 | 53 | 134 | 28 | 108 | 5.96e-17 | 82.4 |
| Msa0154460 | MtrunA17_Chr1g0201271 | 45.536 | 224 | 83 | 3 | 170 | 355 | 377 | 599 | 4.63e-56 | 194 |
| Msa0154460 | MtrunA17_Chr1g0201271 | 38.843 | 121 | 65 | 4 | 20 | 135 | 56 | 172 | 2.00e-14 | 75.1 |
| Msa0154460 | MtrunA17_Chr6g0466801 | 46.188 | 223 | 83 | 3 | 170 | 355 | 375 | 597 | 1.53e-55 | 193 |
| Msa0154460 | MtrunA17_Chr6g0466801 | 40.367 | 109 | 53 | 3 | 60 | 157 | 94 | 201 | 3.24e-16 | 80.5 |
| Msa0154460 | MtrunA17_Chr4g0054941 | 42.478 | 226 | 90 | 2 | 170 | 355 | 316 | 541 | 8.96e-54 | 187 |
| Msa0154460 | MtrunA17_Chr4g0054941 | 38.411 | 151 | 74 | 3 | 1 | 137 | 1 | 146 | 1.25e-19 | 90.9 |
| Msa0154460 | MtrunA17_Chr4g0054951 | 40.800 | 250 | 99 | 4 | 153 | 355 | 294 | 541 | 1.47e-52 | 184 |
| Msa0154460 | MtrunA17_Chr4g0054951 | 36.806 | 144 | 75 | 3 | 4 | 135 | 7 | 146 | 7.35e-17 | 82.4 |
| Msa0154460 | MtrunA17_Chr5g0400311 | 43.805 | 226 | 87 | 2 | 170 | 355 | 373 | 598 | 2.03e-52 | 184 |
| Msa0154460 | MtrunA17_Chr5g0400311 | 31.609 | 174 | 79 | 4 | 4 | 138 | 7 | 179 | 7.66e-17 | 82.4 |
| Msa0154460 | MtrunA17_Chr1g0189231 | 23.219 | 379 | 179 | 14 | 58 | 353 | 521 | 870 | 6.16e-18 | 86.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0154460 | AT2G01900.3 | 56.595 | 417 | 130 | 6 | 1 | 373 | 1 | 410 | 8.99e-157 | 448 |
| Msa0154460 | AT2G01900.2 | 58.250 | 400 | 125 | 6 | 9 | 373 | 1 | 393 | 1.59e-156 | 447 |
| Msa0154460 | AT2G01900.1 | 56.968 | 409 | 125 | 6 | 9 | 373 | 1 | 402 | 1.87e-155 | 445 |
| Msa0154460 | AT2G37440.1 | 41.446 | 415 | 173 | 6 | 10 | 355 | 11 | 424 | 3.59e-96 | 296 |
| Msa0154460 | AT2G37440.3 | 41.446 | 415 | 173 | 6 | 10 | 355 | 11 | 424 | 3.59e-96 | 296 |
| Msa0154460 | AT2G37440.2 | 44.193 | 353 | 124 | 8 | 66 | 355 | 1 | 343 | 2.30e-86 | 268 |
| Msa0154460 | AT2G32010.2 | 45.614 | 228 | 81 | 3 | 170 | 354 | 332 | 559 | 4.37e-61 | 207 |
| Msa0154460 | AT2G32010.2 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 1.93e-19 | 90.9 |
| Msa0154460 | AT2G32010.1 | 45.614 | 228 | 81 | 3 | 170 | 354 | 332 | 559 | 4.37e-61 | 207 |
| Msa0154460 | AT2G32010.1 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 1.93e-19 | 90.9 |
| Msa0154460 | AT2G32010.4 | 45.614 | 228 | 81 | 3 | 170 | 354 | 332 | 559 | 4.37e-61 | 207 |
| Msa0154460 | AT2G32010.4 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 1.93e-19 | 90.9 |
| Msa0154460 | AT2G32010.3 | 45.614 | 228 | 81 | 3 | 170 | 354 | 332 | 559 | 4.37e-61 | 207 |
| Msa0154460 | AT2G32010.3 | 54.667 | 75 | 33 | 1 | 60 | 134 | 87 | 160 | 1.93e-19 | 90.9 |
| Msa0154460 | AT1G05470.2 | 45.175 | 228 | 82 | 3 | 170 | 354 | 355 | 582 | 8.10e-61 | 207 |
| Msa0154460 | AT1G05470.2 | 54.545 | 77 | 34 | 1 | 60 | 136 | 88 | 163 | 1.35e-19 | 91.3 |
| Msa0154460 | AT1G05470.1 | 45.175 | 228 | 82 | 3 | 170 | 354 | 355 | 582 | 8.10e-61 | 207 |
| Msa0154460 | AT1G05470.1 | 54.545 | 77 | 34 | 1 | 60 | 136 | 88 | 163 | 1.35e-19 | 91.3 |
| Msa0154460 | AT5G65090.2 | 47.162 | 229 | 78 | 3 | 170 | 355 | 205 | 433 | 9.46e-61 | 203 |
| Msa0154460 | AT5G65090.2 | 48.052 | 77 | 39 | 1 | 59 | 135 | 5 | 80 | 8.88e-16 | 79.3 |
| Msa0154460 | AT5G65090.3 | 47.162 | 229 | 78 | 3 | 170 | 355 | 268 | 496 | 3.27e-60 | 204 |
| Msa0154460 | AT5G65090.3 | 48.052 | 77 | 39 | 1 | 59 | 135 | 68 | 143 | 1.21e-15 | 79.0 |
| Msa0154460 | AT5G65090.1 | 47.162 | 229 | 78 | 3 | 170 | 355 | 268 | 496 | 3.27e-60 | 204 |
| Msa0154460 | AT5G65090.1 | 48.052 | 77 | 39 | 1 | 59 | 135 | 68 | 143 | 1.21e-15 | 79.0 |
| Msa0154460 | AT5G04980.4 | 43.478 | 230 | 86 | 3 | 170 | 355 | 163 | 392 | 7.18e-58 | 194 |
| Msa0154460 | AT1G34120.5 | 45.575 | 226 | 83 | 4 | 170 | 355 | 188 | 413 | 1.15e-57 | 194 |
| Msa0154460 | AT3G63240.2 | 44.737 | 228 | 83 | 3 | 170 | 354 | 284 | 511 | 2.46e-57 | 196 |
| Msa0154460 | AT3G63240.2 | 58.571 | 70 | 28 | 1 | 65 | 134 | 89 | 157 | 1.83e-17 | 84.7 |
| Msa0154460 | AT3G63240.1 | 44.737 | 228 | 83 | 3 | 170 | 354 | 284 | 511 | 2.46e-57 | 196 |
| Msa0154460 | AT3G63240.1 | 58.571 | 70 | 28 | 1 | 65 | 134 | 89 | 157 | 1.83e-17 | 84.7 |
| Msa0154460 | AT5G04980.2 | 43.478 | 230 | 86 | 3 | 170 | 355 | 227 | 456 | 2.70e-57 | 194 |
| Msa0154460 | AT5G04980.2 | 54.412 | 68 | 30 | 1 | 62 | 129 | 36 | 102 | 1.49e-15 | 78.6 |
| Msa0154460 | AT5G04980.1 | 43.478 | 230 | 86 | 3 | 170 | 355 | 198 | 427 | 2.90e-57 | 194 |
| Msa0154460 | AT5G04980.1 | 54.412 | 68 | 30 | 1 | 62 | 129 | 7 | 73 | 1.55e-15 | 78.2 |
| Msa0154460 | AT5G04980.3 | 43.478 | 230 | 86 | 3 | 170 | 355 | 198 | 427 | 2.90e-57 | 194 |
| Msa0154460 | AT5G04980.3 | 54.412 | 68 | 30 | 1 | 62 | 129 | 7 | 73 | 1.55e-15 | 78.2 |
| Msa0154460 | AT1G34120.2 | 45.575 | 226 | 83 | 4 | 170 | 355 | 343 | 568 | 3.77e-56 | 194 |
| Msa0154460 | AT1G34120.2 | 47.368 | 76 | 39 | 1 | 60 | 135 | 101 | 175 | 9.62e-16 | 79.3 |
| Msa0154460 | AT1G34120.1 | 45.575 | 226 | 83 | 4 | 170 | 355 | 339 | 564 | 3.83e-56 | 194 |
| Msa0154460 | AT1G34120.1 | 47.368 | 76 | 39 | 1 | 60 | 135 | 97 | 171 | 9.40e-16 | 79.3 |
| Msa0154460 | AT1G34120.3 | 45.575 | 226 | 82 | 5 | 170 | 355 | 343 | 567 | 2.31e-54 | 189 |
| Msa0154460 | AT1G34120.3 | 47.368 | 76 | 39 | 1 | 60 | 135 | 101 | 175 | 1.03e-15 | 79.3 |
| Msa0154460 | AT4G18010.1 | 42.035 | 226 | 91 | 2 | 170 | 355 | 395 | 620 | 3.49e-52 | 184 |
| Msa0154460 | AT4G18010.1 | 35.227 | 176 | 69 | 5 | 4 | 135 | 7 | 181 | 2.61e-17 | 84.3 |
| Msa0154460 | AT1G71710.2 | 41.485 | 229 | 96 | 2 | 170 | 360 | 405 | 633 | 1.23e-50 | 180 |
| Msa0154460 | AT1G71710.2 | 43.434 | 99 | 51 | 2 | 37 | 135 | 96 | 189 | 1.06e-17 | 85.5 |
| Msa0154460 | AT1G71710.1 | 41.485 | 229 | 96 | 2 | 170 | 360 | 414 | 642 | 1.75e-50 | 180 |
| Msa0154460 | AT1G71710.1 | 43.434 | 99 | 51 | 2 | 37 | 135 | 105 | 198 | 1.10e-17 | 85.5 |
| Msa0154460 | AT4G18010.2 | 42.935 | 184 | 87 | 2 | 170 | 335 | 395 | 578 | 1.82e-40 | 151 |
| Msa0154460 | AT4G18010.2 | 35.227 | 176 | 69 | 5 | 4 | 135 | 7 | 181 | 3.03e-17 | 84.0 |
| Msa0154460 | AT1G34120.4 | 50.758 | 132 | 63 | 2 | 170 | 299 | 339 | 470 | 1.75e-35 | 136 |
| Msa0154460 | AT1G34120.4 | 47.368 | 76 | 39 | 1 | 60 | 135 | 97 | 171 | 8.26e-16 | 79.3 |
| Msa0154460 | AT1G65580.2 | 24.740 | 384 | 172 | 14 | 58 | 353 | 266 | 620 | 5.56e-20 | 92.8 |
| Msa0154460 | AT1G65580.1 | 24.740 | 384 | 172 | 14 | 58 | 353 | 532 | 886 | 1.14e-19 | 92.0 |
| Msa0154460 | AT2G31830.1 | 23.881 | 469 | 222 | 17 | 24 | 394 | 547 | 978 | 6.43e-17 | 83.6 |
| Msa0154460 | AT2G31830.2 | 23.881 | 469 | 222 | 17 | 24 | 394 | 547 | 978 | 7.21e-17 | 83.2 |
| Msa0154460 | AT2G31830.3 | 24.566 | 346 | 176 | 11 | 24 | 319 | 547 | 857 | 1.14e-16 | 82.8 |
| Msa0154460 | AT2G43900.2 | 24.841 | 314 | 155 | 11 | 58 | 319 | 570 | 854 | 2.19e-16 | 82.0 |
| Msa0154460 | AT2G43900.1 | 24.841 | 314 | 155 | 11 | 58 | 319 | 570 | 854 | 2.93e-16 | 81.6 |
| Msa0154460 | AT1G05630.3 | 23.631 | 347 | 178 | 11 | 24 | 319 | 538 | 848 | 4.68e-16 | 80.9 |
| Msa0154460 | AT1G05630.2 | 23.631 | 347 | 178 | 11 | 24 | 319 | 538 | 848 | 5.13e-16 | 80.9 |
| Msa0154460 | AT1G05630.1 | 24.390 | 246 | 142 | 8 | 24 | 261 | 538 | 747 | 2.21e-11 | 66.2 |
Find 65 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTTGATATCTATGTATT+TGG | 0.059903 | 1_4:-19048790 | Msa0154460:CDS |
| TGTATCACTATGATCATTAA+TGG | 0.163498 | 1_4:+19049055 | None:intergenic |
| AGATAATTGATTATCATTAT+TGG | 0.230119 | 1_4:+19049091 | None:intergenic |
| TCATGATCAAGAATCTTTCT+TGG | 0.273995 | 1_4:+19047307 | None:intergenic |
| AGTAAGCGTGTGGTTTCTTC+TGG | 0.287735 | 1_4:+19046505 | None:intergenic |
| ACTATGATCATTAATGGATT+TGG | 0.307634 | 1_4:+19049061 | None:intergenic |
| TGTGGCATCATGGGCTTCTT+AGG | 0.310282 | 1_4:-19048109 | Msa0154460:CDS |
| GTGTGCAGTCATCTAGCTTC+TGG | 0.323109 | 1_4:-19047421 | Msa0154460:CDS |
| ATAGTAAGATTTCAACAAAA+TGG | 0.329956 | 1_4:-19048390 | Msa0154460:CDS |
| AATACATTTGATGCATTTAG+TGG | 0.341530 | 1_4:+19048424 | None:intergenic |
| CCTTTGATATCTATGTATTT+GGG | 0.345233 | 1_4:-19048789 | Msa0154460:intron |
| TCATTATTGGTAGACAATAA+AGG | 0.363105 | 1_4:+19049104 | None:intergenic |
| ACTAAATGCATCAAATGTAT+TGG | 0.366321 | 1_4:-19048422 | Msa0154460:CDS |
| AAATTCAAAATAGTGCCTTT+AGG | 0.373732 | 1_4:+19047331 | None:intergenic |
| TTAGGTGTGACAGAGTTATA+TGG | 0.379211 | 1_4:-19045573 | Msa0154460:intron |
| CTAAATGCATCAAATGTATT+GGG | 0.392848 | 1_4:-19048421 | Msa0154460:CDS |
| TATCATTTGTGTAGGTTATG+TGG | 0.404828 | 1_4:-19049208 | Msa0154460:intron |
| TCAATATTCAACCCTTCATC+TGG | 0.430166 | 1_4:+19048838 | None:intergenic |
| AAACCATTAATATTTACAAC+CGG | 0.448159 | 1_4:+19045335 | None:intergenic |
| ATGTGTTGGATGTGGCATCA+TGG | 0.454248 | 1_4:-19048119 | Msa0154460:CDS |
| GCTGATTTACACTGCTGAGC+TGG | 0.467900 | 1_4:+19048247 | None:intergenic |
| GGTTATGTGGCCTGCATTAG+TGG | 0.469612 | 1_4:-19049195 | Msa0154460:CDS |
| TTGTATCATTAGCAAGCAAA+TGG | 0.470095 | 1_4:-19048209 | Msa0154460:intron |
| TGCAGTCATGTAATATTGCT+TGG | 0.474593 | 1_4:-19046553 | Msa0154460:intron |
| TTAGAAATGCTTTGAACAAG+AGG | 0.475137 | 1_4:-19048357 | Msa0154460:CDS |
| CTAGCTTCTGGAGGAAAAGA+AGG | 0.476817 | 1_4:-19047409 | Msa0154460:CDS |
| TGGCTAACAAGATACTAAAC+AGG | 0.478415 | 1_4:-19049175 | Msa0154460:CDS |
| TTTGTTAGTACATGGAACAT+AGG | 0.487262 | 1_4:-19048871 | Msa0154460:CDS |
| TGTGACAGAGTTATATGGTT+AGG | 0.491789 | 1_4:-19045568 | Msa0154460:CDS |
| TTACATACAAACTCATCAGT+AGG | 0.492553 | 1_4:+19045373 | None:intergenic |
| ATTGTTGCAAAGATATTGAA+AGG | 0.497320 | 1_4:-19048324 | Msa0154460:CDS |
| TGTGTTGGATGTGGCATCAT+GGG | 0.501040 | 1_4:-19048118 | Msa0154460:CDS |
| GCTGTAAACAATGCCTTGAC+AGG | 0.502522 | 1_4:+19045487 | None:intergenic |
| ATCTTGTTAGCCACTAATGC+AGG | 0.504357 | 1_4:+19049185 | None:intergenic |
| TACATACAAACTCATCAGTA+GGG | 0.506932 | 1_4:+19045374 | None:intergenic |
| ATGTTAAGAGGTTGGCATGA+AGG | 0.507834 | 1_4:-19045794 | Msa0154460:CDS |
| AAGATACTAAACAGGAAACT+TGG | 0.508569 | 1_4:-19049167 | Msa0154460:CDS |
| AGATGAAGGGTTGAATATTG+AGG | 0.512538 | 1_4:-19048836 | Msa0154460:CDS |
| GGTGGAATTGCACCAGATGA+AGG | 0.513447 | 1_4:-19048850 | Msa0154460:CDS |
| AATAAAGGATCTGTATAACT+TGG | 0.514081 | 1_4:+19049119 | None:intergenic |
| GAGAGTGGACAAATGTTAAG+AGG | 0.517143 | 1_4:-19045806 | Msa0154460:CDS |
| AAGAAGGAGATGAGAAGCAT+AGG | 0.520647 | 1_4:-19047393 | Msa0154460:CDS |
| GATGTCTAATGAAAGGACTA+AGG | 0.530564 | 1_4:+19048152 | None:intergenic |
| CTCTCTGAAAGAAACAAGCT+AGG | 0.533780 | 1_4:+19045430 | None:intergenic |
| ATCATTAGCAAGCAAATGGT+TGG | 0.540433 | 1_4:-19048205 | Msa0154460:intron |
| CATCCATGTGTCTCATGTGT+TGG | 0.554145 | 1_4:-19048133 | Msa0154460:CDS |
| GTGGACAAATGTTAAGAGGT+TGG | 0.555687 | 1_4:-19045802 | Msa0154460:CDS |
| TGGTATATTGATATCTGTGT+GGG | 0.555762 | 1_4:-19048185 | Msa0154460:CDS |
| AGAGTTATATGGTTAGGCAA+TGG | 0.561868 | 1_4:-19045562 | Msa0154460:CDS |
| ATCAGATCATAGACCTGTCA+AGG | 0.564826 | 1_4:-19045500 | Msa0154460:CDS |
| TGTGTCTCATGTGTTGGATG+TGG | 0.571735 | 1_4:-19048127 | Msa0154460:CDS |
| ATTGTTTACAGCAGAAGTCA+AGG | 0.572440 | 1_4:-19045476 | Msa0154460:CDS |
| TTAAAGATGGAGCTAGAGAG+TGG | 0.586261 | 1_4:-19045821 | Msa0154460:intron |
| CATGGGCTTCTTAGGCAACA+AGG | 0.587041 | 1_4:-19048101 | Msa0154460:intron |
| CCCAAATACATAGATATCAA+AGG | 0.590421 | 1_4:+19048789 | None:intergenic |
| TTGTTGCAAAGATATTGAAA+GGG | 0.593223 | 1_4:-19048323 | Msa0154460:CDS |
| GTTAGTACATGGAACATAGG+TGG | 0.598161 | 1_4:-19048868 | Msa0154460:CDS |
| TTGGTATATTGATATCTGTG+TGG | 0.601371 | 1_4:-19048186 | Msa0154460:CDS |
| TCTCTGAAAGAAACAAGCTA+GGG | 0.607994 | 1_4:+19045431 | None:intergenic |
| ACACATGGATGTCTAATGAA+AGG | 0.608846 | 1_4:+19048145 | None:intergenic |
| GTGGAATTGCACCAGATGAA+GGG | 0.609719 | 1_4:-19048849 | Msa0154460:CDS |
| CATCCAACACATGAGACACA+TGG | 0.611478 | 1_4:+19048130 | None:intergenic |
| GATTTGAAGAATATTTGTCA+AGG | 0.612327 | 1_4:-19048277 | Msa0154460:CDS |
| TGCAGTCATCTAGCTTCTGG+AGG | 0.612853 | 1_4:-19047418 | Msa0154460:CDS |
| ACATACAAACTCATCAGTAG+GGG | 0.642428 | 1_4:+19045375 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAAATATAATATAAGCA+TGG | + | chr1_4:19048260-19048279 | None:intergenic | 10.0% |
| !! | AAAAATTAAATTTCTTACCA+AGG | - | chr1_4:19045436-19045455 | Msa0154460:CDS | 15.0% |
| !! | AAAATTAAATTTCTTACCAA+GGG | - | chr1_4:19045437-19045456 | Msa0154460:CDS | 15.0% |
| !! | AGATAATTGATTATCATTAT+TGG | + | chr1_4:19045590-19045609 | None:intergenic | 15.0% |
| !! | ATACATTTGATTAATCTAAT+TGG | + | chr1_4:19046728-19046747 | None:intergenic | 15.0% |
| !! | TTCAATTTAAGCATTATTAT+TGG | - | chr1_4:19047595-19047614 | Msa0154460:intron | 15.0% |
| !!! | ATGATAGTATAGTTTAATTT+TGG | + | chr1_4:19047662-19047681 | None:intergenic | 15.0% |
| !! | ATCAATATATTCTTTATACT+AGG | + | chr1_4:19048751-19048770 | None:intergenic | 15.0% |
| !! | TGAATTTAAAAAATACTTGT+AGG | + | chr1_4:19048930-19048949 | None:intergenic | 15.0% |
| !!! | CTTATTTTTTTCTTCATTTT+AGG | - | chr1_4:19049087-19049106 | Msa0154460:CDS | 15.0% |
| !! | AAATGAAAGAAAATATGAGA+AGG | + | chr1_4:19045386-19045405 | None:intergenic | 20.0% |
| !! | TGTATATTTATCATTTGTGT+AGG | - | chr1_4:19045462-19045481 | Msa0154460:CDS | 20.0% |
| !! | GAAATAGGAACATTAAAAAA+TGG | - | chr1_4:19045947-19045966 | Msa0154460:intron | 20.0% |
| !! | ATCTAAACCACATATATATA+TGG | + | chr1_4:19046181-19046200 | None:intergenic | 20.0% |
| !!! | AATTACTCTTTTTACAATCT+AGG | - | chr1_4:19046216-19046235 | Msa0154460:intron | 20.0% |
| !! | ATAGTAAGATTTCAACAAAA+TGG | - | chr1_4:19046288-19046307 | Msa0154460:intron | 20.0% |
| !! | GTGTCAAAATTGTTATATTT+AGG | - | chr1_4:19046823-19046842 | Msa0154460:intron | 20.0% |
| !!! | ATATCAATTTGTTTGATTCA+AGG | + | chr1_4:19046919-19046938 | None:intergenic | 20.0% |
| !! | CAAACAAATTGATATTTGAT+TGG | - | chr1_4:19046924-19046943 | Msa0154460:intron | 20.0% |
| !!! | TTAGCTTCCTTTTAATAATT+AGG | - | chr1_4:19047471-19047490 | Msa0154460:CDS | 20.0% |
| !! | AAAGGAACCTAATTATTAAA+AGG | + | chr1_4:19047481-19047500 | None:intergenic | 20.0% |
| !!! | ATAGTATAGTTTAATTTTGG+CGG | + | chr1_4:19047659-19047678 | None:intergenic | 20.0% |
| !! | TAAATCAATGTATCTCTTTA+AGG | + | chr1_4:19047842-19047861 | None:intergenic | 20.0% |
| !! | TGTTATTCAGTAATTAAAAG+AGG | + | chr1_4:19047900-19047919 | None:intergenic | 20.0% |
| !! | TAGTTAATTTAAGCATAAGT+CGG | + | chr1_4:19047942-19047961 | None:intergenic | 20.0% |
| !! | ATGTATGTCAAAGTAAATTT+AGG | + | chr1_4:19048041-19048060 | None:intergenic | 20.0% |
| !!! | AAAGTGAACATTTTTTTACT+AGG | - | chr1_4:19048720-19048739 | Msa0154460:intron | 20.0% |
| !! | TATAGGAAAAATTAAAGACT+TGG | - | chr1_4:19048787-19048806 | Msa0154460:intron | 20.0% |
| !! | AATGAAATTGAAGTTAAAGA+TGG | - | chr1_4:19048844-19048863 | Msa0154460:CDS | 20.0% |
| !! | TTTAAAAAATACTTGTAGGT+TGG | + | chr1_4:19048926-19048945 | None:intergenic | 20.0% |
| !! | GAAGAAAAAAATAAGAAACT+TGG | + | chr1_4:19049082-19049101 | None:intergenic | 20.0% |
| ! | ATGATAAATATACAAACCCT+TGG | + | chr1_4:19045456-19045475 | None:intergenic | 25.0% |
| ! | AATAAAGGATCTGTATAACT+TGG | + | chr1_4:19045562-19045581 | None:intergenic | 25.0% |
| ! | TCATTATTGGTAGACAATAA+AGG | + | chr1_4:19045577-19045596 | None:intergenic | 25.0% |
| !!! | ACTATGATCATTAATGGATT+TGG | + | chr1_4:19045620-19045639 | None:intergenic | 25.0% |
| ! | TGTATCACTATGATCATTAA+TGG | + | chr1_4:19045626-19045645 | None:intergenic | 25.0% |
| ! | TCCTTTGATATCTATGTATT+TGG | - | chr1_4:19045888-19045907 | Msa0154460:intron | 25.0% |
| ! | CCTTTGATATCTATGTATTT+GGG | - | chr1_4:19045889-19045908 | Msa0154460:intron | 25.0% |
| ! | GAAAAAACTATCACTATGTT+TGG | - | chr1_4:19046049-19046068 | Msa0154460:intron | 25.0% |
| !!! | TTTTTTTCGTCGCAAAATTT+TGG | - | chr1_4:19046106-19046125 | Msa0154460:intron | 25.0% |
| ! | AATACATTTGATGCATTTAG+TGG | + | chr1_4:19046257-19046276 | None:intergenic | 25.0% |
| ! | ACTAAATGCATCAAATGTAT+TGG | - | chr1_4:19046256-19046275 | Msa0154460:intron | 25.0% |
| ! | CTAAATGCATCAAATGTATT+GGG | - | chr1_4:19046257-19046276 | Msa0154460:intron | 25.0% |
| ! | ATTGTTGCAAAGATATTGAA+AGG | - | chr1_4:19046354-19046373 | Msa0154460:intron | 25.0% |
| ! | TTGTTGCAAAGATATTGAAA+GGG | - | chr1_4:19046355-19046374 | Msa0154460:intron | 25.0% |
| ! | GATTTGAAGAATATTTGTCA+AGG | - | chr1_4:19046401-19046420 | Msa0154460:intron | 25.0% |
| ! | TGATACAATGAAAATCTTGT+GGG | + | chr1_4:19046457-19046476 | None:intergenic | 25.0% |
| ! | ATGATACAATGAAAATCTTG+TGG | + | chr1_4:19046458-19046477 | None:intergenic | 25.0% |
| ! | AGTAAGATGAACTAAAAGTA+GGG | + | chr1_4:19046620-19046639 | None:intergenic | 25.0% |
| ! | AAGTAAGATGAACTAAAAGT+AGG | + | chr1_4:19046621-19046640 | None:intergenic | 25.0% |
| !!! | TAGGATCCATTTTAATGTTT+TGG | - | chr1_4:19046969-19046988 | Msa0154460:intron | 25.0% |
| ! | AGCATACCAAAACATTAAAA+TGG | + | chr1_4:19046978-19046997 | None:intergenic | 25.0% |
| !!! | CTAGGAATATTTTTTTAACC+TGG | - | chr1_4:19047011-19047030 | Msa0154460:intron | 25.0% |
| ! | CCAATTAAATTTCAACATGT+TGG | + | chr1_4:19047099-19047118 | None:intergenic | 25.0% |
| ! | CCAACATGTTGAAATTTAAT+TGG | - | chr1_4:19047096-19047115 | Msa0154460:intron | 25.0% |
| !! | ATGTTGCTGAAATATTTTCT+AGG | - | chr1_4:19047315-19047334 | Msa0154460:CDS | 25.0% |
| ! | AAATTCAAAATAGTGCCTTT+AGG | + | chr1_4:19047350-19047369 | None:intergenic | 25.0% |
| ! | AAGCTAAAACCAAATTATTG+AGG | + | chr1_4:19047458-19047477 | None:intergenic | 25.0% |
| ! | AAATTGTTGTACTACTATAG+TGG | - | chr1_4:19047714-19047733 | Msa0154460:intron | 25.0% |
| ! | AATTGTTGTACTACTATAGT+GGG | - | chr1_4:19047715-19047734 | Msa0154460:intron | 25.0% |
| !!! | TTAGCTTGTTTTACTCTATT+TGG | + | chr1_4:19047784-19047803 | None:intergenic | 25.0% |
| ! | AGTAATTAAAAGAGGTCAAA+TGG | + | chr1_4:19047892-19047911 | None:intergenic | 25.0% |
| ! | ATTAACTATAGCATACATGT+TGG | - | chr1_4:19047954-19047973 | Msa0154460:intron | 25.0% |
| !!! | GATTTTTTTGACATACATGT+TGG | - | chr1_4:19047976-19047995 | Msa0154460:intron | 25.0% |
| !!! | GATTTTTTTGACATACATGT+TGG | - | chr1_4:19047976-19047995 | Msa0154460:intron | 25.0% |
| !!! | CATTTTTTCTACATACATGT+TGG | - | chr1_4:19048065-19048084 | Msa0154460:intron | 25.0% |
| !! | TACCTGATCATTTTCTAATA+GGG | + | chr1_4:19048222-19048241 | None:intergenic | 25.0% |
| !! | ATACCTGATCATTTTCTAAT+AGG | + | chr1_4:19048223-19048242 | None:intergenic | 25.0% |
| ! | CTTAAATAGTCACAAGTATT+TGG | + | chr1_4:19048689-19048708 | None:intergenic | 25.0% |
| ! | TCCATTCTTAGTAGATTTAT+AGG | - | chr1_4:19048770-19048789 | Msa0154460:intron | 25.0% |
| ! | TCCTATAAATCTACTAAGAA+TGG | + | chr1_4:19048774-19048793 | None:intergenic | 25.0% |
| ! | TTAAATTCAGATGAGTACTA+TGG | - | chr1_4:19048941-19048960 | Msa0154460:intron | 25.0% |
| ! | TTGTTATCATGGAATGAAAA+AGG | - | chr1_4:19048967-19048986 | Msa0154460:intron | 25.0% |
| ! | GTAAAAAACAATCAAGTTTC+CGG | - | chr1_4:19049324-19049343 | Msa0154460:intron | 25.0% |
| TATCATTTGTGTAGGTTATG+TGG | - | chr1_4:19045470-19045489 | Msa0154460:CDS | 30.0% | |
| AAGATACTAAACAGGAAACT+TGG | - | chr1_4:19045511-19045530 | Msa0154460:CDS | 30.0% | |
| ! | TAAGGGTTTTTGTTAGTACA+TGG | - | chr1_4:19045799-19045818 | Msa0154460:CDS | 30.0% |
| TTTGTTAGTACATGGAACAT+AGG | - | chr1_4:19045807-19045826 | Msa0154460:CDS | 30.0% | |
| CCCAAATACATAGATATCAA+AGG | + | chr1_4:19045892-19045911 | None:intergenic | 30.0% | |
| TGCATGTCCATATATATATG+TGG | - | chr1_4:19046171-19046190 | Msa0154460:intron | 30.0% | |
| ! | TTAGAAATGCTTTGAACAAG+AGG | - | chr1_4:19046321-19046340 | Msa0154460:intron | 30.0% |
| GATACAATGAAAATCTTGTG+GGG | + | chr1_4:19046456-19046475 | None:intergenic | 30.0% | |
| TTGTATCATTAGCAAGCAAA+TGG | - | chr1_4:19046469-19046488 | Msa0154460:intron | 30.0% | |
| TTGGTATATTGATATCTGTG+TGG | - | chr1_4:19046492-19046511 | Msa0154460:intron | 30.0% | |
| TGGTATATTGATATCTGTGT+GGG | - | chr1_4:19046493-19046512 | Msa0154460:intron | 30.0% | |
| ! | AAAGTAGGGTTTGGTTAATT+AGG | + | chr1_4:19046606-19046625 | None:intergenic | 30.0% |
| ATCTAATTGGACACTAATCA+AGG | + | chr1_4:19046715-19046734 | None:intergenic | 30.0% | |
| !! | ATGCTCGAATTGTTATTTCT+AGG | - | chr1_4:19046993-19047012 | Msa0154460:intron | 30.0% |
| TTCAACAGTTGAAATTCAGT+TGG | + | chr1_4:19047053-19047072 | None:intergenic | 30.0% | |
| TTACTATTCTGACAAATTGC+AGG | - | chr1_4:19047187-19047206 | Msa0154460:intron | 30.0% | |
| TACTATTCTGACAAATTGCA+GGG | - | chr1_4:19047188-19047207 | Msa0154460:intron | 30.0% | |
| TCATGATCAAGAATCTTTCT+TGG | + | chr1_4:19047374-19047393 | None:intergenic | 30.0% | |
| ! | AATTATTGAGGTTGATTGGT+TGG | + | chr1_4:19047446-19047465 | None:intergenic | 30.0% |
| ACCAATCAACCTCAATAATT+TGG | - | chr1_4:19047446-19047465 | Msa0154460:CDS | 30.0% | |
| ! | ACCAAATTATTGAGGTTGAT+TGG | + | chr1_4:19047450-19047469 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTCATGATTTGGT+GGG | + | chr1_4:19047504-19047523 | None:intergenic | 30.0% |
| !!! | ACTTTGTTTTCATGATTTGG+TGG | + | chr1_4:19047505-19047524 | None:intergenic | 30.0% |
| !!! | AGCACTTTGTTTTCATGATT+TGG | + | chr1_4:19047508-19047527 | None:intergenic | 30.0% |
| TTGACATACATGTTGGATTA+TGG | - | chr1_4:19047983-19048002 | Msa0154460:intron | 30.0% | |
| ! | TACTTGTTGAAAAAAGAGAC+TGG | - | chr1_4:19048192-19048211 | Msa0154460:CDS | 30.0% |
| ! | ACTTGTTGAAAAAAGAGACT+GGG | - | chr1_4:19048193-19048212 | Msa0154460:CDS | 30.0% |
| TTCCCTATTAGAAAATGATC+AGG | - | chr1_4:19048217-19048236 | Msa0154460:intron | 30.0% | |
| AATTACACATAGAAAAGTCG+AGG | - | chr1_4:19048524-19048543 | Msa0154460:intron | 30.0% | |
| TACTATGGATGTTGTTATCA+TGG | - | chr1_4:19048956-19048975 | Msa0154460:intron | 30.0% | |
| ATATGTTTCTTATACCATGC+TGG | + | chr1_4:19049010-19049029 | None:intergenic | 30.0% | |
| TACATACAAACTCATCAGTA+GGG | + | chr1_4:19049307-19049326 | None:intergenic | 30.0% | |
| TTACATACAAACTCATCAGT+AGG | + | chr1_4:19049308-19049327 | None:intergenic | 30.0% | |
| TGGCTAACAAGATACTAAAC+AGG | - | chr1_4:19045503-19045522 | Msa0154460:CDS | 35.0% | |
| TGCAGCATATGCATAAAAGT+TGG | - | chr1_4:19045718-19045737 | Msa0154460:intron | 35.0% | |
| CATATGCATAAAAGTTGGAG+TGG | - | chr1_4:19045723-19045742 | Msa0154460:intron | 35.0% | |
| !! | TAAAAGTTGGAGTGGTTTTG+TGG | - | chr1_4:19045731-19045750 | Msa0154460:intron | 35.0% |
| TCAATATTCAACCCTTCATC+TGG | + | chr1_4:19045843-19045862 | None:intergenic | 35.0% | |
| AGATGAAGGGTTGAATATTG+AGG | - | chr1_4:19045842-19045861 | Msa0154460:intron | 35.0% | |
| TAATTTCAGCACTCACTTCA+TGG | - | chr1_4:19045912-19045931 | Msa0154460:intron | 35.0% | |
| !! | TGGTTTTCTAGCATGGAAAT+AGG | - | chr1_4:19045932-19045951 | Msa0154460:intron | 35.0% |
| ATCATTAGCAAGCAAATGGT+TGG | - | chr1_4:19046473-19046492 | Msa0154460:intron | 35.0% | |
| GATGTCTAATGAAAGGACTA+AGG | + | chr1_4:19046529-19046548 | None:intergenic | 35.0% | |
| ACACATGGATGTCTAATGAA+AGG | + | chr1_4:19046536-19046555 | None:intergenic | 35.0% | |
| GATGAACTAAAAGTAGGGTT+TGG | + | chr1_4:19046615-19046634 | None:intergenic | 35.0% | |
| ATTGACAGTGATGAGATTAG+TGG | + | chr1_4:19046684-19046703 | None:intergenic | 35.0% | |
| TTAGATTATTCCAACGACTG+AGG | - | chr1_4:19046772-19046791 | Msa0154460:intron | 35.0% | |
| TTATCCTTAATCCTCTGAGT+CGG | - | chr1_4:19046854-19046873 | Msa0154460:intron | 35.0% | |
| CAGTTGAAATTCAGTTGGAT+AGG | + | chr1_4:19047048-19047067 | None:intergenic | 35.0% | |
| !! | TCTAGGACAAGTTTTCCTAA+AGG | - | chr1_4:19047332-19047351 | Msa0154460:CDS | 35.0% |
| !!! | TTTTCATGATTTGGTGGGAA+AGG | + | chr1_4:19047499-19047518 | None:intergenic | 35.0% |
| AATTTGTCCTGCTAGATTGA+AGG | - | chr1_4:19047633-19047652 | Msa0154460:intron | 35.0% | |
| TGCAGTCATGTAATATTGCT+TGG | - | chr1_4:19048125-19048144 | Msa0154460:CDS | 35.0% | |
| !! | TTTTTCAACAAGTAAGCGTG+TGG | + | chr1_4:19048186-19048205 | None:intergenic | 35.0% |
| !! | AATGCTAACAGCTAGCTTTA+GGG | + | chr1_4:19048434-19048453 | None:intergenic | 35.0% |
| !! | AAATGCTAACAGCTAGCTTT+AGG | + | chr1_4:19048435-19048454 | None:intergenic | 35.0% |
| ATGTGTGTGTAAACACATAG+AGG | - | chr1_4:19048463-19048482 | Msa0154460:intron | 35.0% | |
| TTAGGTGTGACAGAGTTATA+TGG | - | chr1_4:19049105-19049124 | Msa0154460:CDS | 35.0% | |
| TGTGACAGAGTTATATGGTT+AGG | - | chr1_4:19049110-19049129 | Msa0154460:CDS | 35.0% | |
| AGAGTTATATGGTTAGGCAA+TGG | - | chr1_4:19049116-19049135 | Msa0154460:CDS | 35.0% | |
| ATTGTTTACAGCAGAAGTCA+AGG | - | chr1_4:19049202-19049221 | Msa0154460:intron | 35.0% | |
| ! | TCTCTGAAAGAAACAAGCTA+GGG | + | chr1_4:19049250-19049269 | None:intergenic | 35.0% |
| ACATACAAACTCATCAGTAG+GGG | + | chr1_4:19049306-19049325 | None:intergenic | 35.0% | |
| ATCTTGTTAGCCACTAATGC+AGG | + | chr1_4:19045496-19045515 | None:intergenic | 40.0% | |
| GTTAGTACATGGAACATAGG+TGG | - | chr1_4:19045810-19045829 | Msa0154460:CDS | 40.0% | |
| !! | CACTTCATGGTTTTCTAGCA+TGG | - | chr1_4:19045925-19045944 | Msa0154460:intron | 40.0% |
| TCACTATGTTTGGCAACTCT+AGG | - | chr1_4:19046059-19046078 | Msa0154460:intron | 40.0% | |
| ! | TATGTTTGGCAACTCTAGGA+CGG | - | chr1_4:19046063-19046082 | Msa0154460:intron | 40.0% |
| TATTGTGCATTCGAGCACAT+AGG | - | chr1_4:19046950-19046969 | Msa0154460:intron | 40.0% | |
| TTCAGTTGGATAGGTTTCAG+AGG | + | chr1_4:19047039-19047058 | None:intergenic | 40.0% | |
| ! | AAGAAGGAGATGAGAAGCAT+AGG | - | chr1_4:19047285-19047304 | Msa0154460:intron | 40.0% |
| ! | ATTGAGGTTGATTGGTTGGA+CGG | + | chr1_4:19047442-19047461 | None:intergenic | 40.0% |
| TAGCAGGACAAATTCAAAGC+TGG | + | chr1_4:19047627-19047646 | None:intergenic | 40.0% | |
| AAAGTCGAGGAAGTCTTACA+AGG | - | chr1_4:19048537-19048556 | Msa0154460:intron | 40.0% | |
| TTAAAGATGGAGCTAGAGAG+TGG | - | chr1_4:19048857-19048876 | Msa0154460:CDS | 40.0% | |
| GAGAGTGGACAAATGTTAAG+AGG | - | chr1_4:19048872-19048891 | Msa0154460:CDS | 40.0% | |
| GTGGACAAATGTTAAGAGGT+TGG | - | chr1_4:19048876-19048895 | Msa0154460:CDS | 40.0% | |
| ATGTTAAGAGGTTGGCATGA+AGG | - | chr1_4:19048884-19048903 | Msa0154460:intron | 40.0% | |
| ATCAGATCATAGACCTGTCA+AGG | - | chr1_4:19049178-19049197 | Msa0154460:CDS | 40.0% | |
| ! | CTCTCTGAAAGAAACAAGCT+AGG | + | chr1_4:19049251-19049270 | None:intergenic | 40.0% |
| GTGGAATTGCACCAGATGAA+GGG | - | chr1_4:19045829-19045848 | Msa0154460:intron | 45.0% | |
| !! | CTCTAGGACGGAATTAGAGA+TGG | - | chr1_4:19046075-19046094 | Msa0154460:intron | 45.0% |
| CATCCATGTGTCTCATGTGT+TGG | - | chr1_4:19046545-19046564 | Msa0154460:CDS | 45.0% | |
| CATCCAACACATGAGACACA+TGG | + | chr1_4:19046551-19046570 | None:intergenic | 45.0% | |
| TGTGTCTCATGTGTTGGATG+TGG | - | chr1_4:19046551-19046570 | Msa0154460:CDS | 45.0% | |
| ATGTGTTGGATGTGGCATCA+TGG | - | chr1_4:19046559-19046578 | Msa0154460:intron | 45.0% | |
| TGTGTTGGATGTGGCATCAT+GGG | - | chr1_4:19046560-19046579 | Msa0154460:intron | 45.0% | |
| TCGATCCTACCGTTGAGATT+CGG | + | chr1_4:19046889-19046908 | None:intergenic | 45.0% | |
| CAACATGTTGGATTCGAGCT+AGG | + | chr1_4:19047087-19047106 | None:intergenic | 45.0% | |
| TAATTGGATCGACTGCACAG+AGG | - | chr1_4:19047112-19047131 | Msa0154460:intron | 45.0% | |
| ! | CTAGCTTCTGGAGGAAAAGA+AGG | - | chr1_4:19047269-19047288 | Msa0154460:intron | 45.0% |
| AGTAAGCGTGTGGTTTCTTC+TGG | + | chr1_4:19048176-19048195 | None:intergenic | 45.0% | |
| CAAAGAAGAGATCACCAGCA+TGG | - | chr1_4:19048993-19049012 | Msa0154460:intron | 45.0% | |
| GCTGTAAACAATGCCTTGAC+AGG | + | chr1_4:19049194-19049213 | None:intergenic | 45.0% | |
| ! | CTAGGGAAGCTTTTCAATGC+TGG | + | chr1_4:19049233-19049252 | None:intergenic | 45.0% |
| !!! | ATCTTTTTTTTATTTATTTA+AGG | - | chr1_4:19045781-19045800 | Msa0154460:CDS | 5.0% |
| !!! | TCTTTTTTTTATTTATTTAA+GGG | - | chr1_4:19045782-19045801 | Msa0154460:CDS | 5.0% |
| GGTTATGTGGCCTGCATTAG+TGG | - | chr1_4:19045483-19045502 | Msa0154460:CDS | 50.0% | |
| GGTGGAATTGCACCAGATGA+AGG | - | chr1_4:19045828-19045847 | Msa0154460:intron | 50.0% | |
| ! | GCTGATTTACACTGCTGAGC+TGG | + | chr1_4:19046434-19046453 | None:intergenic | 50.0% |
| TGTGGCATCATGGGCTTCTT+AGG | - | chr1_4:19046569-19046588 | Msa0154460:intron | 50.0% | |
| CATGGGCTTCTTAGGCAACA+AGG | - | chr1_4:19046577-19046596 | Msa0154460:intron | 50.0% | |
| TCCAACGACTGAGGTGAAGT+AGG | - | chr1_4:19046781-19046800 | Msa0154460:intron | 50.0% | |
| TCCTACTTCACCTCAGTCGT+TGG | + | chr1_4:19046785-19046804 | None:intergenic | 50.0% | |
| CCTTAATCCTCTGAGTCGGA+CGG | - | chr1_4:19046858-19046877 | Msa0154460:intron | 50.0% | |
| ACGGTCCAACCGAATCTCAA+CGG | - | chr1_4:19046877-19046896 | Msa0154460:intron | 50.0% | |
| TCCAACCGAATCTCAACGGT+AGG | - | chr1_4:19046881-19046900 | Msa0154460:intron | 50.0% | |
| ! | TCCTACCGTTGAGATTCGGT+TGG | + | chr1_4:19046885-19046904 | None:intergenic | 50.0% |
| GGATAGGTTTCAGAGGATCC+AGG | + | chr1_4:19047032-19047051 | None:intergenic | 50.0% | |
| ! | GTGTGCAGTCATCTAGCTTC+TGG | - | chr1_4:19047257-19047276 | Msa0154460:intron | 50.0% |
| ! | TGCAGTCATCTAGCTTCTGG+AGG | - | chr1_4:19047260-19047279 | Msa0154460:intron | 50.0% |
| CCGTCCGACTCAGAGGATTA+AGG | + | chr1_4:19046861-19046880 | None:intergenic | 55.0% | |
| TTGGATCGACTGCACAGAGG+AGG | - | chr1_4:19047115-19047134 | Msa0154460:intron | 55.0% | |
| TGGATCGACTGCACAGAGGA+GGG | - | chr1_4:19047116-19047135 | Msa0154460:intron | 55.0% | |
| TTGGCGGCCTTCAATCTAGC+AGG | + | chr1_4:19047643-19047662 | None:intergenic | 55.0% | |
| GGTTGGACCGTCCGACTCAG+AGG | + | chr1_4:19046868-19046887 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 19045348 | 19049352 | 19045348 | ID=Msa0154460;Name=Msa0154460 |
| chr1_4 | mRNA | 19045348 | 19049352 | 19045348 | ID=Msa0154460-mRNA-1;Parent=Msa0154460;Name=Msa0154460-mRNA-1;_AED=0.11;_eAED=0.11;_QI=0|0|0|1|0.62|0.55|9|0|396 |
| chr1_4 | exon | 19049332 | 19049352 | 19049332 | ID=Msa0154460-mRNA-1:exon:7008;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19049044 | 19049216 | 19049044 | ID=Msa0154460-mRNA-1:exon:7007;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19048790 | 19048897 | 19048790 | ID=Msa0154460-mRNA-1:exon:7006;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19048259 | 19048462 | 19048259 | ID=Msa0154460-mRNA-1:exon:7005;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19048102 | 19048219 | 19048102 | ID=Msa0154460-mRNA-1:exon:7004;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19047307 | 19047491 | 19047307 | ID=Msa0154460-mRNA-1:exon:7003;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19046504 | 19046570 | 19046504 | ID=Msa0154460-mRNA-1:exon:7002;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19045767 | 19045837 | 19045767 | ID=Msa0154460-mRNA-1:exon:7001;Parent=Msa0154460-mRNA-1 |
| chr1_4 | exon | 19045348 | 19045591 | 19045348 | ID=Msa0154460-mRNA-1:exon:7000;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19049332 | 19049352 | 19049332 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19049044 | 19049216 | 19049044 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19048790 | 19048897 | 19048790 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19048259 | 19048462 | 19048259 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19048102 | 19048219 | 19048102 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19047307 | 19047491 | 19047307 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19046504 | 19046570 | 19046504 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19045767 | 19045837 | 19045767 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| chr1_4 | CDS | 19045348 | 19045591 | 19045348 | ID=Msa0154460-mRNA-1:cds;Parent=Msa0154460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
