AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0654490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654490 MtrunA17_Chr4g0049401 80.435 230 4 2 1 230 1 189 4.35e-127 357
Msa0654490 MtrunA17_Chr2g0286921 63.095 168 30 1 63 230 30 165 2.24e-73 220
Msa0654490 MtrunA17_Chr2g0286931 60.241 166 33 2 65 230 2 134 5.82e-65 197
Msa0654490 MtrunA17_Chr2g0286901 61.069 131 48 1 100 230 26 153 1.63e-54 172
Msa0654490 MtrunA17_Chr8g0359081 37.580 157 61 4 74 227 88 210 8.89e-27 102
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0654490 AT4G21860.4 64.607 178 31 1 52 229 54 199 1.29e-78 235
Msa0654490 AT4G21860.1 64.607 178 31 1 52 229 54 199 1.29e-78 235
Msa0654490 AT4G21860.3 64.607 178 31 1 52 229 54 199 1.29e-78 235
Msa0654490 AT4G04800.1 62.428 173 33 1 58 230 34 174 9.75e-73 219
Msa0654490 AT4G04830.1 62.651 166 30 1 65 230 2 135 8.64e-71 213
Msa0654490 AT4G04810.1 61.006 159 30 1 71 229 8 134 2.29e-65 199
Msa0654490 AT4G21850.1 55.294 170 44 1 61 230 5 142 6.66e-65 198
Msa0654490 AT4G21840.1 55.491 173 43 2 60 230 1 141 4.65e-64 196
Msa0654490 AT4G21830.2 53.801 171 47 1 60 230 1 139 2.85e-62 191
Msa0654490 AT4G04830.2 56.627 166 30 1 65 230 2 125 5.34e-61 187
Msa0654490 AT4G21830.1 55.556 162 40 1 69 230 13 142 2.78e-60 186
Msa0654490 AT4G04840.1 52.727 165 46 1 64 228 17 149 1.12e-59 185
Msa0654490 AT4G21860.2 54.688 128 26 1 52 179 54 149 3.23e-42 142
Msa0654490 AT4G04810.2 56.881 109 15 1 71 179 8 84 2.52e-36 124
Msa0654490 AT4G21850.2 48.739 119 29 1 61 179 5 91 2.19e-35 122
Msa0654490 AT1G53670.1 37.209 172 62 5 66 225 57 194 1.30e-27 104
Msa0654490 AT1G53670.2 34.302 172 60 6 66 225 57 187 2.50e-21 88.2

Find 111 sgRNAs with CRISPR-Local

Find 267 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCATTCTTCCTCCGATTTC+TGG 0.041403 4_3:-62666603 None:intergenic
AACTATAGCAGTACTGAAAT+TGG 0.198734 4_3:+62669841 Msa0654490:three_prime_UTR
ATCTACCAATTCTTCTTCTT+TGG 0.198958 4_3:-62666326 None:intergenic
GCCTTCTATGAGGGTGTTCC+TGG 0.207845 4_3:+62669478 Msa0654490:CDS
AGTATCCACCGTTGTTTAAT+AGG 0.234702 4_3:+62670085 Msa0654490:three_prime_UTR
GGAGAATATGACAAATTCTT+TGG 0.249999 4_3:+62669373 Msa0654490:CDS
GGGTGGGGTGAAGGTGAATT+TGG 0.259093 4_3:-62666488 None:intergenic
TTATTTAAGCTACATAATTT+AGG 0.262832 4_3:-62669886 None:intergenic
AGAAGCAGAGGAGATTAAAT+TGG 0.267545 4_3:+62668574 Msa0654490:CDS
CATTTATTTCCATCCTCTCC+TGG 0.283908 4_3:+62669926 Msa0654490:three_prime_UTR
ATTTCTATCCTCATTCCATC+TGG 0.297903 4_3:-62669638 None:intergenic
CATCTCGGTCATGTATTTAA+AGG 0.300561 4_3:+62669683 Msa0654490:CDS
TTGTCATATTCTCCTGTTCC+AGG 0.323050 4_3:-62669364 None:intergenic
GAGAATATGACAAATTCTTT+GGG 0.337073 4_3:+62669374 Msa0654490:CDS
GTATCCACCGTTGTTTAATA+GGG 0.342648 4_3:+62670086 Msa0654490:three_prime_UTR
CATTGTAAATAACTAGGAAT+TGG 0.348681 4_3:-62669774 None:intergenic
TCAAACACAATTACACTCTA+TGG 0.358437 4_3:-62670016 None:intergenic
TATTGTTCCTGAGATTGTTT+TGG 0.358920 4_3:+62669976 Msa0654490:three_prime_UTR
GACACAATGGCGTTCGTTCG+TGG 0.375923 4_3:-62669723 None:intergenic
ATTTATTTCCATCCTCTCCT+GGG 0.376995 4_3:+62669927 Msa0654490:three_prime_UTR
TCTACAGTTGTGCAGGTTGC+GGG 0.382998 4_3:+62669404 Msa0654490:CDS
TCAACAACAAAATTCAATTC+CGG 0.394212 4_3:+62669442 Msa0654490:CDS
GAGAGAGTTGGGTGGGGTGA+AGG 0.399554 4_3:-62666497 None:intergenic
ACAAAATTCAATTCCGGTTG+TGG 0.401214 4_3:+62669448 Msa0654490:CDS
TTGTGGTTAAGGAGATGTTT+TGG 0.410758 4_3:+62668625 Msa0654490:CDS
CATATCCAAAGAAGAAGAAT+TGG 0.411902 4_3:+62666321 Msa0654490:five_prime_UTR
TCCTGGCTCGGTCCAGAAAT+CGG 0.412246 4_3:+62666591 Msa0654490:CDS
GTCTACAGTTGTGCAGGTTG+CGG 0.417871 4_3:+62669403 Msa0654490:CDS
TTTCATACCAAAACAATCTC+AGG 0.421636 4_3:-62669983 None:intergenic
TCCGATTTCTGGACCGAGCC+AGG 0.422097 4_3:-62666592 None:intergenic
GATGGAAATAAATGAACATC+TGG 0.423523 4_3:-62669917 None:intergenic
TCCAGGAACACCCTCATAGA+AGG 0.426613 4_3:-62669479 None:intergenic
CTCAGAATTCGAAACTGCTC+AGG 0.426783 4_3:-62666640 None:intergenic
AAGAAGAAGAATTGGTAGAT+TGG 0.430513 4_3:+62666329 Msa0654490:five_prime_UTR
GAGATGGTAGGGAGAGAGTT+GGG 0.431155 4_3:-62666508 None:intergenic
ATGTCTGCTGCACCTACTCC+TGG 0.438702 4_3:+62666574 Msa0654490:CDS
TTGGAGTTGAAGAGAAAGGT+AGG 0.444884 4_3:-62666469 None:intergenic
GTTAGAACAAATTGAGGAGA+TGG 0.444988 4_3:-62666446 None:intergenic
ACAAATTGAGGAGATGGGTT+TGG 0.448728 4_3:-62666440 None:intergenic
TGCTGCACCTACTCCTGGCT+CGG 0.454251 4_3:+62666579 Msa0654490:CDS
ATCCTCATTCCATCTGGGTC+CGG 0.459799 4_3:-62669632 None:intergenic
GAAGGCTGGCCAGCCACAAC+CGG 0.459992 4_3:-62669461 None:intergenic
TTTCTATCCTCATTCCATCT+GGG 0.463849 4_3:-62669637 None:intergenic
GATGGGTTTGGTGACGTTGA+GGG 0.465319 4_3:-62666428 None:intergenic
AATTCAATTCCGGTTGTGGC+TGG 0.467338 4_3:+62669452 Msa0654490:CDS
TTATCAAGGTACCCTGGAAC+AGG 0.467778 4_3:+62669352 Msa0654490:intron
ACTATAGCAGTACTGAAATT+GGG 0.471520 4_3:+62669842 Msa0654490:three_prime_UTR
AAATAACATGTGCTGCTTGT+GGG 0.473497 4_3:+62669657 Msa0654490:CDS
GAGGGAGTCTACAGTTGTGC+AGG 0.478161 4_3:+62669397 Msa0654490:CDS
TCCAGAAATCGGAGGAAGAA+TGG 0.490874 4_3:+62666602 Msa0654490:CDS
AGGAGTAGGTGCAGCAGACA+TGG 0.492353 4_3:-62666572 None:intergenic
AACAATCTCAGGAACAATAC+AGG 0.494058 4_3:-62669972 None:intergenic
GGAGATGGTAGGGAGAGAGT+TGG 0.494986 4_3:-62666509 None:intergenic
GAATTTGGAGTTGAAGAGAA+AGG 0.496737 4_3:-62666473 None:intergenic
TTAGAACAAATTGAGGAGAT+GGG 0.498670 4_3:-62666445 None:intergenic
GAAGCAGAGGAGATTAAATT+GGG 0.498740 4_3:+62668575 Msa0654490:CDS
TGGTAGGGAGAGAGTTGGGT+GGG 0.499556 4_3:-62666504 None:intergenic
TCTTCTTCTTTGGATATGAT+CGG 0.499789 4_3:-62666316 None:intergenic
TGGAGTTGAAGAGAAAGGTA+GGG 0.502554 4_3:-62666468 None:intergenic
ATGGTAGGGAGAGAGTTGGG+TGG 0.512379 4_3:-62666505 None:intergenic
CAGTCATCTTGTGTTCATCA+AGG 0.513640 4_3:-62666375 None:intergenic
GTAAATAACTAGGAATTGGC+TGG 0.513940 4_3:-62669770 None:intergenic
AGATGGGTTTGGTGACGTTG+AGG 0.516062 4_3:-62666429 None:intergenic
ACACAATGGCGTTCGTTCGT+GGG 0.518853 4_3:-62669722 None:intergenic
TTTCGAATTCTGAGGCAGAA+AGG 0.526917 4_3:+62666649 Msa0654490:CDS
TTTGTTGTTGACTTGTAGAG+TGG 0.535127 4_3:-62669430 None:intergenic
ACCACGCTTCGGCTGACGAA+TGG 0.535443 4_3:-62666530 None:intergenic
TGGCTGGCCAGCCTTCTATG+AGG 0.541767 4_3:+62669468 Msa0654490:CDS
GGTAGGGTTAGAACAAATTG+AGG 0.542736 4_3:-62666452 None:intergenic
GGTCATGTATTTAAAGGTGA+AGG 0.544366 4_3:+62669689 Msa0654490:CDS
GTGACGTTGAGGGAAGAAAG+AGG 0.544790 4_3:-62666418 None:intergenic
TATGACAAATTCTTTGGGGA+GGG 0.549093 4_3:+62669379 Msa0654490:CDS
GGTAGGGAGAGAGTTGGGTG+GGG 0.550203 4_3:-62666503 None:intergenic
CCACCGCGAAAACCACGCTT+CGG 0.552502 4_3:-62666541 None:intergenic
TTTATTTCCATCCTCTCCTG+GGG 0.552821 4_3:+62669928 Msa0654490:three_prime_UTR
GGCTGGCCAGCCTTCTATGA+GGG 0.553211 4_3:+62669469 Msa0654490:CDS
ACGTGGCGGTTTATAGCTCC+AGG 0.554221 4_3:-62669496 None:intergenic
TGTCATATTCTCCTGTTCCA+GGG 0.557941 4_3:-62669363 None:intergenic
TGGCGTTCGTTCGTGGGTGT+CGG 0.560916 4_3:-62669716 None:intergenic
GGACTTCATTGTAAATAACT+AGG 0.565168 4_3:-62669780 None:intergenic
AGATGACTGTGAATATACTA+AGG 0.565635 4_3:+62666389 Msa0654490:exon
TCCATTCGTCAGCCGAAGCG+TGG 0.570636 4_3:+62666529 Msa0654490:CDS
GGCTGACGAATGGAGATGGT+AGG 0.572122 4_3:-62666520 None:intergenic
CTTCGGCTGACGAATGGAGA+TGG 0.572282 4_3:-62666524 None:intergenic
GTGGCAGGGAGGAGAAGCAG+AGG 0.575142 4_3:+62668562 Msa0654490:intron
GTATTATTATCAAGGTACCC+TGG 0.575400 4_3:+62669346 Msa0654490:intron
TCAGAATTCGAAACTGCTCA+GGG 0.577261 4_3:-62666639 None:intergenic
GGAACACCCTCATAGAAGGC+TGG 0.578117 4_3:-62669475 None:intergenic
GAAATAACATGTGCTGCTTG+TGG 0.579814 4_3:+62669656 Msa0654490:CDS
AGCCGGACCCAGATGGAATG+AGG 0.581127 4_3:+62669630 Msa0654490:intron
AATAACATGTGCTGCTTGTG+GGG 0.586603 4_3:+62669658 Msa0654490:CDS
ATATGACAAATTCTTTGGGG+AGG 0.589338 4_3:+62669378 Msa0654490:CDS
CACCACCAGCCGGACCCAGA+TGG 0.591335 4_3:+62669623 Msa0654490:intron
CTGAGCAGTTTCGAATTCTG+AGG 0.595443 4_3:+62666641 Msa0654490:CDS
GCTGACGAATGGAGATGGTA+GGG 0.596509 4_3:-62666519 None:intergenic
GAGGAGATTAAATTGGGCAG+AGG 0.599908 4_3:+62668581 Msa0654490:CDS
TATCCACCGTTGTTTAATAG+GGG 0.600305 4_3:+62670087 Msa0654490:three_prime_UTR
TTCTGGACCGAGCCAGGAGT+AGG 0.614503 4_3:-62666586 None:intergenic
GTGAAATGCTATTGACACAA+TGG 0.617327 4_3:-62669736 None:intergenic
TTATTTCCATCCTCTCCTGG+GGG 0.622985 4_3:+62669929 Msa0654490:three_prime_UTR
TGGGACTGTGGCTTATAGAG+TGG 0.633677 4_3:+62669861 Msa0654490:three_prime_UTR
CAGTACTGAAATTGGGACTG+TGG 0.640736 4_3:+62669849 Msa0654490:three_prime_UTR
TTACAATGAAGTCCACTCTG+TGG 0.644295 4_3:+62669789 Msa0654490:three_prime_UTR
TCCATGCCCCTATTAAACAA+CGG 0.649561 4_3:-62670093 None:intergenic
AGAATATGACAAATTCTTTG+GGG 0.674356 4_3:+62669375 Msa0654490:CDS
TGGCTCGGTCCAGAAATCGG+AGG 0.678535 4_3:+62666594 Msa0654490:CDS
ATAACATGTGCTGCTTGTGG+GGG 0.687021 4_3:+62669659 Msa0654490:CDS
CATATGATGTATCCACAGAG+TGG 0.689508 4_3:-62669801 None:intergenic
CAGAATTCGAAACTGCTCAG+GGG 0.702893 4_3:-62666638 None:intergenic
ATGCCCCTATTAAACAACGG+TGG 0.711599 4_3:-62670090 None:intergenic
GATACATCATATGATGCACA+TGG 0.773043 4_3:+62669811 Msa0654490:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AGTTTTATTTTTTAAGTAAA+AGG + chr4_3:62667875-62667894 Msa0654490:intron 10.0%
!!! ACTTAATTGATTTTAAATTT+TGG - chr4_3:62667947-62667966 None:intergenic 10.0%
!!! TTAGTTTTTTTTGAAATAAA+TGG + chr4_3:62668155-62668174 Msa0654490:intron 10.0%
!!! TAGTTTTTTTTGAAATAAAT+GGG + chr4_3:62668156-62668175 Msa0654490:intron 10.0%
!! ATATAATTATATATGATAGT+GGG - chr4_3:62668976-62668995 None:intergenic 10.0%
!! TATATAATTATATATGATAG+TGG - chr4_3:62668977-62668996 None:intergenic 10.0%
!!! AGTTTTTTTTGAAATAAATG+GGG + chr4_3:62668157-62668176 Msa0654490:intron 15.0%
!!! TTTGTTTATAATTTTTTTGG+AGG + chr4_3:62669007-62669026 Msa0654490:intron 15.0%
!!! ATGATTTTGTCATATTAAAT+TGG + chr4_3:62669073-62669092 Msa0654490:intron 15.0%
!! TTATTTAAGCTACATAATTT+AGG - chr4_3:62669889-62669908 None:intergenic 15.0%
!! TTTATTAAAAACAGCTTAAT+AGG - chr4_3:62670043-62670062 None:intergenic 15.0%
!! TTTCATAGTACTATATTACA+TGG - chr4_3:62666887-62666906 None:intergenic 20.0%
!! TTTATTATGGCTTAATGAAA+TGG + chr4_3:62666926-62666945 Msa0654490:intron 20.0%
!!! ACTTTAACTTCATTTTCTAA+AGG + chr4_3:62666993-62667012 Msa0654490:intron 20.0%
!! AAAAATTGTCCCAAAATATA+TGG + chr4_3:62667444-62667463 Msa0654490:intron 20.0%
!! TATTAATTAGAGTGTAGAAT+TGG - chr4_3:62667508-62667527 None:intergenic 20.0%
!!! ATCAAAAAGCTCAATTATTT+TGG + chr4_3:62667674-62667693 Msa0654490:intron 20.0%
!!! TCAAAAAGCTCAATTATTTT+GGG + chr4_3:62667675-62667694 Msa0654490:intron 20.0%
!! AATATATTAGCACAAGAAAT+GGG - chr4_3:62667764-62667783 None:intergenic 20.0%
!!! CATATTTTGCAAATATACAT+GGG + chr4_3:62667843-62667862 Msa0654490:intron 20.0%
!!! ATATTTTGCAAATATACATG+GGG + chr4_3:62667844-62667863 Msa0654490:intron 20.0%
!! TATTATAACATTTAAGTCTG+TGG + chr4_3:62668221-62668240 Msa0654490:intron 20.0%
!! AAATAATGTGATACAGAAAA+TGG - chr4_3:62668306-62668325 None:intergenic 20.0%
!!! TATATCCTTTTCCATTTAAA+GGG - chr4_3:62668465-62668484 None:intergenic 20.0%
!! ATTAACATATGGAGATATAA+GGG + chr4_3:62668489-62668508 Msa0654490:intron 20.0%
!! TAAACATGCAATAAATTTGT+TGG + chr4_3:62668764-62668783 Msa0654490:intron 20.0%
!! TCCTAACATGATAATATTAA+TGG + chr4_3:62668833-62668852 Msa0654490:intron 20.0%
!! CCTAACATGATAATATTAAT+GGG + chr4_3:62668834-62668853 Msa0654490:intron 20.0%
!!! CATATTAAATTGGTAATCTT+AGG + chr4_3:62669083-62669102 Msa0654490:intron 20.0%
!!! TTTCACATGTTATATCTTTT+TGG + chr4_3:62669135-62669154 Msa0654490:intron 20.0%
!!! ATGTTTTGGTATTATTATCA+AGG + chr4_3:62669338-62669357 Msa0654490:intron 20.0%
!!! TGAAACACATAAATTTTATC+AGG - chr4_3:62669605-62669624 None:intergenic 20.0%
! TTGAGCTATTTATCCAAATA+GGG + chr4_3:62666829-62666848 Msa0654490:intron 25.0%
! ATATAGTACTATGAAAACCA+TGG + chr4_3:62666891-62666910 Msa0654490:intron 25.0%
!!! GTAAGTGGTAAGTTTTATTA+TGG + chr4_3:62666913-62666932 Msa0654490:intron 25.0%
! ATTATTATCCACACACTATA+TGG + chr4_3:62667187-62667206 Msa0654490:intron 25.0%
!! ATTCGTGTTATAAGTTTTTG+AGG - chr4_3:62667294-62667313 None:intergenic 25.0%
! TCAAAAACTTATAACACGAA+TGG + chr4_3:62667293-62667312 Msa0654490:intron 25.0%
! TTAGAAGTAATTTCAGAGAT+GGG - chr4_3:62667333-62667352 None:intergenic 25.0%
!! ACAAAAGGCTCAATTATTTT+GGG - chr4_3:62667421-62667440 None:intergenic 25.0%
!! AACAAAAGGCTCAATTATTT+TGG - chr4_3:62667422-62667441 None:intergenic 25.0%
!!! GGGACAATTTTTTTAACAAA+AGG - chr4_3:62667436-62667455 None:intergenic 25.0%
! AAAGGTGATTAATATTGCAT+TGG - chr4_3:62667483-62667502 None:intergenic 25.0%
! GGTAAGAAAAAAATTCTGAA+TGG - chr4_3:62667743-62667762 None:intergenic 25.0%
! CAATATATTAGCACAAGAAA+TGG - chr4_3:62667765-62667784 None:intergenic 25.0%
!! GCATATTTTGCAAATATACA+TGG + chr4_3:62667842-62667861 Msa0654490:intron 25.0%
! TCAATTAAGTACAAACACTA+TGG + chr4_3:62667957-62667976 Msa0654490:intron 25.0%
!! TGATGTGACAATTATAGTTT+TGG + chr4_3:62668011-62668030 Msa0654490:intron 25.0%
!! GATGTGACAATTATAGTTTT+GGG + chr4_3:62668012-62668031 Msa0654490:intron 25.0%
! ATCATACTTGAAATGTAACT+AGG + chr4_3:62668041-62668060 Msa0654490:intron 25.0%
! TCATACTTGAAATGTAACTA+GGG + chr4_3:62668042-62668061 Msa0654490:intron 25.0%
! TAGAGTTACAAAAAAAGTAG+AGG - chr4_3:62668083-62668102 None:intergenic 25.0%
! TGTAACTCTATGTTGAATTA+AGG + chr4_3:62668093-62668112 Msa0654490:intron 25.0%
!!! TTTTTTGAAATAAATGGGGT+CGG + chr4_3:62668161-62668180 Msa0654490:intron 25.0%
! ATTACATATGCTCAATTATG+CGG - chr4_3:62668335-62668354 None:intergenic 25.0%
!! CTATATCCTTTTCCATTTAA+AGG - chr4_3:62668466-62668485 None:intergenic 25.0%
! TTAAATGGAAAAGGATATAG+AGG + chr4_3:62668466-62668485 Msa0654490:intron 25.0%
! GATTAACATATGGAGATATA+AGG + chr4_3:62668488-62668507 Msa0654490:intron 25.0%
! TGTTTGTGTGATATTATCAT+AGG + chr4_3:62668536-62668555 Msa0654490:intron 25.0%
!! ATTAGAAGTTTTGCAGTAAA+TGG + chr4_3:62668650-62668669 Msa0654490:intron 25.0%
! CCCATTAATATTATCATGTT+AGG - chr4_3:62668837-62668856 None:intergenic 25.0%
!! ATAGCATTTTATCTTACTTG+AGG + chr4_3:62668862-62668881 Msa0654490:intron 25.0%
! ATATTAAACTCAAACAGTTC+AGG - chr4_3:62669196-62669215 None:intergenic 25.0%
!! CATTTTCTTGTTAACAGAAA+AGG - chr4_3:62669321-62669340 None:intergenic 25.0%
!! CTGTTAACAAGAAAATGTTT+TGG + chr4_3:62669324-62669343 Msa0654490:intron 25.0%
! GAGAATATGACAAATTCTTT+GGG + chr4_3:62669374-62669393 Msa0654490:CDS 25.0%
! AGAATATGACAAATTCTTTG+GGG + chr4_3:62669375-62669394 Msa0654490:CDS 25.0%
! TCAACAACAAAATTCAATTC+CGG + chr4_3:62669442-62669461 Msa0654490:CDS 25.0%
! CATTGTAAATAACTAGGAAT+TGG - chr4_3:62669777-62669796 None:intergenic 25.0%
TCTTCTTCTTTGGATATGAT+CGG - chr4_3:62666319-62666338 None:intergenic 30.0%
CATATCCAAAGAAGAAGAAT+TGG + chr4_3:62666321-62666340 Msa0654490:five_prime_UTR 30.0%
ATCTACCAATTCTTCTTCTT+TGG - chr4_3:62666329-62666348 None:intergenic 30.0%
AAGAAGAAGAATTGGTAGAT+TGG + chr4_3:62666329-62666348 Msa0654490:five_prime_UTR 30.0%
AGATGACTGTGAATATACTA+AGG + chr4_3:62666389-62666408 Msa0654490:exon 30.0%
TTAGAACAAATTGAGGAGAT+GGG - chr4_3:62666448-62666467 None:intergenic 30.0%
GTTGAGCTATTTATCCAAAT+AGG + chr4_3:62666828-62666847 Msa0654490:intron 30.0%
TATTTATCCAAATAGGGAAC+AGG + chr4_3:62666835-62666854 Msa0654490:intron 30.0%
ATTTATCCAAATAGGGAACA+GGG + chr4_3:62666836-62666855 Msa0654490:intron 30.0%
ATAAAACTTACCACTTACCA+TGG - chr4_3:62666911-62666930 None:intergenic 30.0%
!! ACTTCATTTTCTAAAGGAGA+AGG + chr4_3:62666999-62667018 Msa0654490:intron 30.0%
!! CTTCATTTTCTAAAGGAGAA+GGG + chr4_3:62667000-62667019 Msa0654490:intron 30.0%
!!! TTTTGAGGTTAGAAGAGTTA+GGG - chr4_3:62667279-62667298 None:intergenic 30.0%
!!! TTTTTGAGGTTAGAAGAGTT+AGG - chr4_3:62667280-62667299 None:intergenic 30.0%
GTTAGAAGTAATTTCAGAGA+TGG - chr4_3:62667334-62667353 None:intergenic 30.0%
!! CTCTGAAATTACTTCTAACA+TGG + chr4_3:62667335-62667354 Msa0654490:intron 30.0%
! TGAAATGGGCCATATATTTT+GGG - chr4_3:62667456-62667475 None:intergenic 30.0%
ATTGCATTGGAAAGTGAAAT+GGG - chr4_3:62667470-62667489 None:intergenic 30.0%
TATTGCATTGGAAAGTGAAA+TGG - chr4_3:62667471-62667490 None:intergenic 30.0%
TAGAGTGTAGAATTGGAAAA+AGG - chr4_3:62667501-62667520 None:intergenic 30.0%
CCATTATCATAAATGCAAAG+TGG - chr4_3:62667561-62667580 None:intergenic 30.0%
CCACTTTGCATTTATGATAA+TGG + chr4_3:62667558-62667577 Msa0654490:intron 30.0%
AATGCATCAATACTTAGACA+AGG + chr4_3:62667583-62667602 Msa0654490:intron 30.0%
!!! AAAGCTCAATTATTTTGGGA+CGG + chr4_3:62667679-62667698 Msa0654490:intron 30.0%
! TAACGACTTTTCAACTGATT+TGG + chr4_3:62667901-62667920 Msa0654490:intron 30.0%
GGATATAGAGGATTAACATA+TGG + chr4_3:62668478-62668497 Msa0654490:intron 30.0%
! ATAAGGGCTTCATATGATTT+TGG + chr4_3:62668505-62668524 Msa0654490:intron 30.0%
! TTTTAGGCTTTTTGTGGTTA+AGG + chr4_3:62668614-62668633 Msa0654490:CDS 30.0%
!! GCAATAAATTTGTTGGAGTA+TGG + chr4_3:62668771-62668790 Msa0654490:intron 30.0%
!! ATTTGTTGGAGTATGGTTTT+TGG + chr4_3:62668778-62668797 Msa0654490:intron 30.0%
! TTTGTTGGAGTATGGTTTTT+GGG + chr4_3:62668779-62668798 Msa0654490:intron 30.0%
TATCATGTTAGGAGATTTAG+TGG - chr4_3:62668826-62668845 None:intergenic 30.0%
CAATTGTTAAATGTGTAGTC+TGG + chr4_3:62669047-62669066 Msa0654490:intron 30.0%
!! TCAAGTTGACAGAAAAGTAT+CGG - chr4_3:62669256-62669275 None:intergenic 30.0%
GGAGAATATGACAAATTCTT+TGG + chr4_3:62669373-62669392 Msa0654490:CDS 30.0%
TAAGAACAAATAAACTCACG+TGG - chr4_3:62669516-62669535 None:intergenic 30.0%
GGACTTCATTGTAAATAACT+AGG - chr4_3:62669783-62669802 None:intergenic 30.0%
! AACTATAGCAGTACTGAAAT+TGG + chr4_3:62669841-62669860 Msa0654490:three_prime_UTR 30.0%
! ACTATAGCAGTACTGAAATT+GGG + chr4_3:62669842-62669861 Msa0654490:three_prime_UTR 30.0%
GATGGAAATAAATGAACATC+TGG - chr4_3:62669920-62669939 None:intergenic 30.0%
! TATTGTTCCTGAGATTGTTT+TGG + chr4_3:62669976-62669995 Msa0654490:three_prime_UTR 30.0%
TTTCATACCAAAACAATCTC+AGG - chr4_3:62669986-62670005 None:intergenic 30.0%
TCAAACACAATTACACTCTA+TGG - chr4_3:62670019-62670038 None:intergenic 30.0%
GTTAGAACAAATTGAGGAGA+TGG - chr4_3:62666449-62666468 None:intergenic 35.0%
! GAATTTGGAGTTGAAGAGAA+AGG - chr4_3:62666476-62666495 None:intergenic 35.0%
GAGAGATGAAATAACGTACT+CGG - chr4_3:62666677-62666696 None:intergenic 35.0%
ATAGCTCAACTAAGAGCTTA+TGG - chr4_3:62666818-62666837 None:intergenic 35.0%
ACTATGAAAACCATGGTAAG+TGG + chr4_3:62666898-62666917 Msa0654490:intron 35.0%
AAGATTTCCTACATAGAAGC+TGG - chr4_3:62666958-62666977 None:intergenic 35.0%
GATGATCTGGTTAAGTTAAG+TGG + chr4_3:62667029-62667048 Msa0654490:intron 35.0%
TGCTCAGTGTCATATAAGTT+AGG + chr4_3:62667116-62667135 Msa0654490:intron 35.0%
! ATCCACACACTATATGGTTT+TGG + chr4_3:62667193-62667212 Msa0654490:intron 35.0%
GGGATTCAGAAATACAGAAA+TGG - chr4_3:62667259-62667278 None:intergenic 35.0%
! AGAGATGGGTTCAAAAATGT+TGG - chr4_3:62667319-62667338 None:intergenic 35.0%
!!! AAGGCTCAATTATTTTGGGA+CGG - chr4_3:62667417-62667436 None:intergenic 35.0%
! GTGAAATGGGCCATATATTT+TGG - chr4_3:62667457-62667476 None:intergenic 35.0%
CTTATCAGAGATGCGAATTA+AGG + chr4_3:62668267-62668286 Msa0654490:intron 35.0%
! TTTTACTCACGCTCTTTGAA+AGG + chr4_3:62668410-62668429 Msa0654490:intron 35.0%
TGATGCCCTTTAAATGGAAA+AGG + chr4_3:62668457-62668476 Msa0654490:intron 35.0%
GTGATATTATCATAGGCATG+TGG + chr4_3:62668543-62668562 Msa0654490:intron 35.0%
AGAAGCAGAGGAGATTAAAT+TGG + chr4_3:62668574-62668593 Msa0654490:CDS 35.0%
GAAGCAGAGGAGATTAAATT+GGG + chr4_3:62668575-62668594 Msa0654490:CDS 35.0%
!! GCAATGTTTTAGGCTTTTTG+TGG + chr4_3:62668608-62668627 Msa0654490:CDS 35.0%
! TTGTGGTTAAGGAGATGTTT+TGG + chr4_3:62668625-62668644 Msa0654490:CDS 35.0%
TTGCAGTAAATGGTTAGAGA+AGG + chr4_3:62668660-62668679 Msa0654490:intron 35.0%
TGCAGTAAATGGTTAGAGAA+GGG + chr4_3:62668661-62668680 Msa0654490:intron 35.0%
! TTGTTGGAGTATGGTTTTTG+GGG + chr4_3:62668780-62668799 Msa0654490:intron 35.0%
! GCATTTTATCTTACTTGAGG+TGG + chr4_3:62668865-62668884 Msa0654490:intron 35.0%
!! ATATGATAGTGGGTGATAGT+GGG - chr4_3:62668966-62668985 None:intergenic 35.0%
!! TATATGATAGTGGGTGATAG+TGG - chr4_3:62668967-62668986 None:intergenic 35.0%
TAACATGTGAAACATACTGC+AGG - chr4_3:62669127-62669146 None:intergenic 35.0%
! GTATTATTATCAAGGTACCC+TGG + chr4_3:62669346-62669365 Msa0654490:intron 35.0%
! ATATGACAAATTCTTTGGGG+AGG + chr4_3:62669378-62669397 Msa0654490:CDS 35.0%
! TATGACAAATTCTTTGGGGA+GGG + chr4_3:62669379-62669398 Msa0654490:CDS 35.0%
!! TTTGTTGTTGACTTGTAGAG+TGG - chr4_3:62669433-62669452 None:intergenic 35.0%
ACAAAATTCAATTCCGGTTG+TGG + chr4_3:62669448-62669467 Msa0654490:CDS 35.0%
ATCCAAAGATAGTGAAGAGA+AGG - chr4_3:62669544-62669563 None:intergenic 35.0%
TTTCTATCCTCATTCCATCT+GGG - chr4_3:62669640-62669659 None:intergenic 35.0%
ATTTCTATCCTCATTCCATC+TGG - chr4_3:62669641-62669660 None:intergenic 35.0%
!! AAATAACATGTGCTGCTTGT+GGG + chr4_3:62669657-62669676 Msa0654490:CDS 35.0%
CATCTCGGTCATGTATTTAA+AGG + chr4_3:62669683-62669702 Msa0654490:CDS 35.0%
GGTCATGTATTTAAAGGTGA+AGG + chr4_3:62669689-62669708 Msa0654490:CDS 35.0%
GTGAAATGCTATTGACACAA+TGG - chr4_3:62669739-62669758 None:intergenic 35.0%
GTAAATAACTAGGAATTGGC+TGG - chr4_3:62669773-62669792 None:intergenic 35.0%
GATACATCATATGATGCACA+TGG + chr4_3:62669811-62669830 Msa0654490:three_prime_UTR 35.0%
ATTTATTTCCATCCTCTCCT+GGG + chr4_3:62669927-62669946 Msa0654490:three_prime_UTR 35.0%
AACAATCTCAGGAACAATAC+AGG - chr4_3:62669975-62669994 None:intergenic 35.0%
AGTATCCACCGTTGTTTAAT+AGG + chr4_3:62670085-62670104 Msa0654490:three_prime_UTR 35.0%
GTATCCACCGTTGTTTAATA+GGG + chr4_3:62670086-62670105 Msa0654490:three_prime_UTR 35.0%
TATCCACCGTTGTTTAATAG+GGG + chr4_3:62670087-62670106 Msa0654490:three_prime_UTR 35.0%
CAGTCATCTTGTGTTCATCA+AGG - chr4_3:62666378-62666397 None:intergenic 40.0%
! ACAAATTGAGGAGATGGGTT+TGG - chr4_3:62666443-62666462 None:intergenic 40.0%
GGTAGGGTTAGAACAAATTG+AGG - chr4_3:62666455-62666474 None:intergenic 40.0%
TGGAGTTGAAGAGAAAGGTA+GGG - chr4_3:62666471-62666490 None:intergenic 40.0%
TTGGAGTTGAAGAGAAAGGT+AGG - chr4_3:62666472-62666491 None:intergenic 40.0%
TCAGAATTCGAAACTGCTCA+GGG - chr4_3:62666642-62666661 None:intergenic 40.0%
!! TTTCGAATTCTGAGGCAGAA+AGG + chr4_3:62666649-62666668 Msa0654490:CDS 40.0%
TAACTTCCCTGTTCCCTATT+TGG - chr4_3:62666845-62666864 None:intergenic 40.0%
AGCCAAAACCATATAGTGTG+TGG - chr4_3:62667198-62667217 None:intergenic 40.0%
!!! CTCAATTATTTTGGGACGGA+GGG - chr4_3:62667683-62667702 None:intergenic 40.0%
!!! CTCAATTATTTTGGGACGGA+GGG + chr4_3:62667683-62667702 Msa0654490:intron 40.0%
TGGATAGAACATGCTGAAAG+AGG + chr4_3:62667921-62667940 Msa0654490:intron 40.0%
ACAAACACTATGGCTGACAT+CGG + chr4_3:62667967-62667986 Msa0654490:intron 40.0%
! CTGTACTGATGCCCTTTAAA+TGG + chr4_3:62668451-62668470 Msa0654490:intron 40.0%
TATTATCATAGGCATGTGGC+AGG + chr4_3:62668547-62668566 Msa0654490:intron 40.0%
ATTATCATAGGCATGTGGCA+GGG + chr4_3:62668548-62668567 Msa0654490:intron 40.0%
AGTAAATGGTTAGAGAAGGG+AGG + chr4_3:62668664-62668683 Msa0654490:intron 40.0%
TGATGCAGTAGAAGTTTAGC+AGG + chr4_3:62668689-62668708 Msa0654490:intron 40.0%
TAGAAGTTTAGCAGGTGTCA+AGG + chr4_3:62668697-62668716 Msa0654490:intron 40.0%
AGAAGTTTAGCAGGTGTCAA+GGG + chr4_3:62668698-62668717 Msa0654490:intron 40.0%
!!! TTTTGGGGCAGTGATGTTAT+TGG + chr4_3:62668795-62668814 Msa0654490:intron 40.0%
TGTCATATTCTCCTGTTCCA+GGG - chr4_3:62669366-62669385 None:intergenic 40.0%
TTGTCATATTCTCCTGTTCC+AGG - chr4_3:62669367-62669386 None:intergenic 40.0%
GAACAAATAAACTCACGTGG+CGG - chr4_3:62669513-62669532 None:intergenic 40.0%
TGCCTTCTCTTCACTATCTT+TGG + chr4_3:62669539-62669558 Msa0654490:intron 40.0%
!! GAAATAACATGTGCTGCTTG+TGG + chr4_3:62669656-62669675 Msa0654490:CDS 40.0%
!! AATAACATGTGCTGCTTGTG+GGG + chr4_3:62669658-62669677 Msa0654490:CDS 40.0%
TTACAATGAAGTCCACTCTG+TGG + chr4_3:62669789-62669808 Msa0654490:three_prime_UTR 40.0%
CATATGATGTATCCACAGAG+TGG - chr4_3:62669804-62669823 None:intergenic 40.0%
CATTTATTTCCATCCTCTCC+TGG + chr4_3:62669926-62669945 Msa0654490:three_prime_UTR 40.0%
TTTATTTCCATCCTCTCCTG+GGG + chr4_3:62669928-62669947 Msa0654490:three_prime_UTR 40.0%
TCCAGAAATCGGAGGAAGAA+TGG + chr4_3:62666602-62666621 Msa0654490:CDS 45.0%
CAGAATTCGAAACTGCTCAG+GGG - chr4_3:62666641-62666660 None:intergenic 45.0%
CTCAGAATTCGAAACTGCTC+AGG - chr4_3:62666643-62666662 None:intergenic 45.0%
CTGAGCAGTTTCGAATTCTG+AGG + chr4_3:62666641-62666660 Msa0654490:CDS 45.0%
TTTCCTACATAGAAGCTGGC+TGG - chr4_3:62666954-62666973 None:intergenic 45.0%
! AGAAGGGCATGAAGATGATC+TGG + chr4_3:62667016-62667035 Msa0654490:intron 45.0%
!!! GCTCAATTATTTTGGGACGG+AGG - chr4_3:62667682-62667701 None:intergenic 45.0%
AGAGAGAGAGAGAGAGAGAA+TGG - chr4_3:62667619-62667638 None:intergenic 45.0%
!!! GCTCAATTATTTTGGGACGG+AGG + chr4_3:62667682-62667701 Msa0654490:intron 45.0%
ATTGTACGCACTTGACGAGA+AGG + chr4_3:62667781-62667800 Msa0654490:intron 45.0%
TTGTACGCACTTGACGAGAA+GGG + chr4_3:62667782-62667801 Msa0654490:intron 45.0%
CAAACACTATGGCTGACATC+GGG + chr4_3:62667968-62667987 Msa0654490:intron 45.0%
! TCACGCTCTTTGAAAGGTCA+CGG + chr4_3:62668416-62668435 Msa0654490:intron 45.0%
GAGGAGATTAAATTGGGCAG+AGG + chr4_3:62668581-62668600 Msa0654490:CDS 45.0%
! CAGAGGAGCAGCAATGTTTT+AGG + chr4_3:62668598-62668617 Msa0654490:CDS 45.0%
! TTATCAAGGTACCCTGGAAC+AGG + chr4_3:62669352-62669371 Msa0654490:intron 45.0%
AATTCAATTCCGGTTGTGGC+TGG + chr4_3:62669452-62669471 Msa0654490:CDS 45.0%
TTATGTGTTTCACCACCAGC+CGG + chr4_3:62669613-62669632 Msa0654490:intron 45.0%
!! ATAACATGTGCTGCTTGTGG+GGG + chr4_3:62669659-62669678 Msa0654490:CDS 45.0%
! CAGTACTGAAATTGGGACTG+TGG + chr4_3:62669849-62669868 Msa0654490:three_prime_UTR 45.0%
TTATTTCCATCCTCTCCTGG+GGG + chr4_3:62669929-62669948 Msa0654490:three_prime_UTR 45.0%
!!! ATATTTGTTTATAATTTTTT+TGG + chr4_3:62669004-62669023 Msa0654490:intron 5.0%
GTGACGTTGAGGGAAGAAAG+AGG - chr4_3:62666421-62666440 None:intergenic 50.0%
!! GATGGGTTTGGTGACGTTGA+GGG - chr4_3:62666431-62666450 None:intergenic 50.0%
!! AGATGGGTTTGGTGACGTTG+AGG - chr4_3:62666432-62666451 None:intergenic 50.0%
GAGATGGTAGGGAGAGAGTT+GGG - chr4_3:62666511-62666530 None:intergenic 50.0%
GCTGACGAATGGAGATGGTA+GGG - chr4_3:62666522-62666541 None:intergenic 50.0%
GCCATTCTTCCTCCGATTTC+TGG - chr4_3:62666606-62666625 None:intergenic 50.0%
GTCTACAGTTGTGCAGGTTG+CGG + chr4_3:62669403-62669422 Msa0654490:CDS 50.0%
TCTACAGTTGTGCAGGTTGC+GGG + chr4_3:62669404-62669423 Msa0654490:CDS 50.0%
TCCAGGAACACCCTCATAGA+AGG - chr4_3:62669482-62669501 None:intergenic 50.0%
ATCCTCATTCCATCTGGGTC+CGG - chr4_3:62669635-62669654 None:intergenic 50.0%
ACACAATGGCGTTCGTTCGT+GGG - chr4_3:62669725-62669744 None:intergenic 50.0%
TGGGACTGTGGCTTATAGAG+TGG + chr4_3:62669861-62669880 Msa0654490:three_prime_UTR 50.0%
GTGAACATAATACAGCCCCC+AGG - chr4_3:62669947-62669966 None:intergenic 50.0%
GGGTGGGGTGAAGGTGAATT+TGG - chr4_3:62666491-62666510 None:intergenic 55.0%
TGGTAGGGAGAGAGTTGGGT+GGG - chr4_3:62666507-62666526 None:intergenic 55.0%
ATGGTAGGGAGAGAGTTGGG+TGG - chr4_3:62666508-62666527 None:intergenic 55.0%
GGAGATGGTAGGGAGAGAGT+TGG - chr4_3:62666512-62666531 None:intergenic 55.0%
GGCTGACGAATGGAGATGGT+AGG - chr4_3:62666523-62666542 None:intergenic 55.0%
CTTCGGCTGACGAATGGAGA+TGG - chr4_3:62666527-62666546 None:intergenic 55.0%
AGGAGTAGGTGCAGCAGACA+TGG - chr4_3:62666575-62666594 None:intergenic 55.0%
ATGTCTGCTGCACCTACTCC+TGG + chr4_3:62666574-62666593 Msa0654490:CDS 55.0%
!! TCCTGGCTCGGTCCAGAAAT+CGG + chr4_3:62666591-62666610 Msa0654490:CDS 55.0%
GAGCCAGCCAGCTTCTATGT+AGG + chr4_3:62666948-62666967 Msa0654490:intron 55.0%
ATCATAGGCATGTGGCAGGG+AGG + chr4_3:62668551-62668570 Msa0654490:intron 55.0%
GAGGGAGTCTACAGTTGTGC+AGG + chr4_3:62669397-62669416 Msa0654490:CDS 55.0%
GGAACACCCTCATAGAAGGC+TGG - chr4_3:62669478-62669497 None:intergenic 55.0%
!! GCCTTCTATGAGGGTGTTCC+TGG + chr4_3:62669478-62669497 Msa0654490:CDS 55.0%
ACGTGGCGGTTTATAGCTCC+AGG - chr4_3:62669499-62669518 None:intergenic 55.0%
GACACAATGGCGTTCGTTCG+TGG - chr4_3:62669726-62669745 None:intergenic 55.0%
CATAATACAGCCCCCAGGAG+AGG - chr4_3:62669942-62669961 None:intergenic 55.0%
GAGAGAGTTGGGTGGGGTGA+AGG - chr4_3:62666500-62666519 None:intergenic 60.0%
GGTAGGGAGAGAGTTGGGTG+GGG - chr4_3:62666506-62666525 None:intergenic 60.0%
TCCATTCGTCAGCCGAAGCG+TGG + chr4_3:62666529-62666548 Msa0654490:CDS 60.0%
ACCACGCTTCGGCTGACGAA+TGG - chr4_3:62666533-62666552 None:intergenic 60.0%
! CAGCCGAAGCGTGGTTTTCG+CGG + chr4_3:62666538-62666557 Msa0654490:CDS 60.0%
CCACCGCGAAAACCACGCTT+CGG - chr4_3:62666544-62666563 None:intergenic 60.0%
TGCTGCACCTACTCCTGGCT+CGG + chr4_3:62666579-62666598 Msa0654490:CDS 60.0%
TTCTGGACCGAGCCAGGAGT+AGG - chr4_3:62666589-62666608 None:intergenic 60.0%
! TCCGATTTCTGGACCGAGCC+AGG - chr4_3:62666595-62666614 None:intergenic 60.0%
!! TGGCTCGGTCCAGAAATCGG+AGG + chr4_3:62666594-62666613 Msa0654490:CDS 60.0%
CACTATGGCTGACATCGGGC+TGG + chr4_3:62667972-62667991 Msa0654490:intron 60.0%
!! ATGGCTGACATCGGGCTGGT+TGG + chr4_3:62667976-62667995 Msa0654490:intron 60.0%
!! TGGCTGACATCGGGCTGGTT+GGG + chr4_3:62667977-62667996 Msa0654490:intron 60.0%
! TGGCTGGCCAGCCTTCTATG+AGG + chr4_3:62669468-62669487 Msa0654490:CDS 60.0%
! GGCTGGCCAGCCTTCTATGA+GGG + chr4_3:62669469-62669488 Msa0654490:CDS 60.0%
TCATTCCATCTGGGTCCGGC+TGG - chr4_3:62669631-62669650 None:intergenic 60.0%
AGCCGGACCCAGATGGAATG+AGG + chr4_3:62669630-62669649 Msa0654490:intron 60.0%
GCTGCTTGTGGGGGACATCT+CGG + chr4_3:62669668-62669687 Msa0654490:CDS 60.0%
TGGCGTTCGTTCGTGGGTGT+CGG - chr4_3:62669719-62669738 None:intergenic 60.0%
ATACAGCCCCCAGGAGAGGA+TGG - chr4_3:62669938-62669957 None:intergenic 60.0%
! CCGAAGCGTGGTTTTCGCGG+TGG + chr4_3:62666541-62666560 Msa0654490:CDS 65.0%
GTGGCAGGGAGGAGAAGCAG+AGG + chr4_3:62668562-62668581 Msa0654490:intron 65.0%
! GAAGGCTGGCCAGCCACAAC+CGG - chr4_3:62669464-62669483 None:intergenic 65.0%
TTCCATCTGGGTCCGGCTGG+TGG - chr4_3:62669628-62669647 None:intergenic 65.0%
CACCACCAGCCGGACCCAGA+TGG + chr4_3:62669623-62669642 Msa0654490:intron 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 62666310 62670110 62666310 ID=Msa0654490;Name=Msa0654490
chr4_3 mRNA 62666310 62670110 62666310 ID=Msa0654490-mRNA-1;Parent=Msa0654490;Name=Msa0654490-mRNA-1;_AED=0.05;_eAED=0.05;_QI=81|0.33|0.75|0.75|1|1|4|326|230
chr4_3 exon 62666310 62666677 62666310 ID=Msa0654490-mRNA-1:exon:17422;Parent=Msa0654490-mRNA-1
chr4_3 exon 62668569 62668664 62668569 ID=Msa0654490-mRNA-1:exon:17423;Parent=Msa0654490-mRNA-1
chr4_3 exon 62669360 62669516 62669360 ID=Msa0654490-mRNA-1:exon:17424;Parent=Msa0654490-mRNA-1
chr4_3 exon 62669632 62670110 62669632 ID=Msa0654490-mRNA-1:exon:17425;Parent=Msa0654490-mRNA-1
chr4_3 five_prime_UTR 62666310 62666390 62666310 ID=Msa0654490-mRNA-1:five_prime_utr;Parent=Msa0654490-mRNA-1
chr4_3 CDS 62666391 62666677 62666391 ID=Msa0654490-mRNA-1:cds;Parent=Msa0654490-mRNA-1
chr4_3 CDS 62668569 62668664 62668569 ID=Msa0654490-mRNA-1:cds;Parent=Msa0654490-mRNA-1
chr4_3 CDS 62669360 62669516 62669360 ID=Msa0654490-mRNA-1:cds;Parent=Msa0654490-mRNA-1
chr4_3 CDS 62669632 62669784 62669632 ID=Msa0654490-mRNA-1:cds;Parent=Msa0654490-mRNA-1
chr4_3 three_prime_UTR 62669785 62670110 62669785 ID=Msa0654490-mRNA-1:three_prime_utr;Parent=Msa0654490-mRNA-1
Gene Sequence

>Msa0654490

ATGACTGTGAATATACTAAGGATAACACCTCTTTCTTCCCTCAACGTCACCAAACCCATCTCCTCAATTTGTTCTAACCCTACCTTTCTCTTCAACTCCAAATTCACCTTCACCCCACCCAACTCTCTCCCTACCATCTCCATTCGTCAGCCGAAGCGTGGTTTTCGCGGTGGAATTGTCGCCATGTCTGCTGCACCTACTCCTGGCTCGGTCCAGAAATCGGAGGAAGAATGGCAAGCTATTCTCTCCCCTGAGCAGTTTCGAATTCTGAGGCAGAAAGGCACCGAGGAGGAGAAGCAGAGGAGATTAAATTGGGCAGAGGAGCAGCAATGTTTTAGGCTTTTTGTGGTTAAGGAGATGTTTTGGAAATTAGAAGTTTTGCAGTACCCTGGAACAGGAGAATATGACAAATTCTTTGGGGAGGGAGTCTACAGTTGTGCAGGTTGCGGGACTCCACTCTACAAGTCAACAACAAAATTCAATTCCGGTTGTGGCTGGCCAGCCTTCTATGAGGGTGTTCCTGGAGCTATAAACCGCCACCCGGACCCAGATGGAATGAGGATAGAAATAACATGTGCTGCTTGTGGGGGACATCTCGGTCATGTATTTAAAGGTGAAGGATTTCCGACACCCACGAACGAACGCCATTGTGTCAATAGCATTTCACTAAAATTTGCGCCAGCCAATTCCTAG

Protein sequence

>Msa0654490

MTVNILRITPLSSLNVTKPISSICSNPTFLFNSKFTFTPPNSLPTISIRQPKRGFRGGIVAMSAAPTPGSVQKSEEEWQAILSPEQFRILRQKGTEEEKQRRLNWAEEQQCFRLFVVKEMFWKLEVLQYPGTGEYDKFFGEGVYSCAGCGTPLYKSTTKFNSGCGWPAFYEGVPGAINRHPDPDGMRIEITCAACGGHLGHVFKGEGFPTPTNERHCVNSISLKFAPANS*