Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044310 | sp|Q9M291|SC24C_ARATH | 77.120 | 625 | 129 | 3 | 1 | 612 | 472 | 1095 | 0.0 | 1021 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001800 | Msa0044310 | 0.826705 | 2.342778e-54 | -8.615850e-47 |
| Msa0004180 | Msa0044310 | -0.813472 | 2.516329e-51 | -8.615850e-47 |
| Msa0013270 | Msa0044310 | 0.835900 | 1.281686e-56 | -8.615850e-47 |
| Msa0017300 | Msa0044310 | -0.806721 | 7.168143e-50 | -8.615850e-47 |
| Msa0025570 | Msa0044310 | 0.815338 | 9.729405e-52 | -8.615850e-47 |
| Msa0027020 | Msa0044310 | -0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0044310 | Msa0047560 | -0.800314 | 1.527229e-48 | -8.615850e-47 |
| Msa0044310 | Msa0065670 | -0.810879 | 9.256133e-51 | -8.615850e-47 |
| Msa0044310 | Msa0073110 | 0.808463 | 3.059868e-50 | -8.615850e-47 |
| Msa0044310 | Msa0080100 | -0.822367 | 2.460690e-53 | -8.615850e-47 |
| Msa0044310 | Msa0081030 | 0.810060 | 1.390808e-50 | -8.615850e-47 |
| Msa0044310 | Msa0086620 | -0.807819 | 4.194529e-50 | -8.615850e-47 |
| Msa0044310 | Msa0095890 | -0.822351 | 2.481511e-53 | -8.615850e-47 |
| Msa0044310 | Msa0106540 | 0.829948 | 3.867733e-55 | -8.615850e-47 |
| Msa0044310 | Msa0120100 | -0.805923 | 1.056011e-49 | -8.615850e-47 |
| Msa0044310 | Msa0120160 | -0.806604 | 7.588162e-50 | -8.615850e-47 |
| Msa0044310 | Msa0160380 | 0.807936 | 3.961856e-50 | -8.615850e-47 |
| Msa0044310 | Msa0167570 | -0.802543 | 5.337383e-49 | -8.615850e-47 |
| Msa0044310 | Msa0196580 | -0.803204 | 3.897981e-49 | -8.615850e-47 |
| Msa0044310 | Msa0211460 | 0.831301 | 1.804195e-55 | -8.615850e-47 |
| Msa0044310 | Msa0238460 | -0.805414 | 1.350483e-49 | -8.615850e-47 |
| Msa0044310 | Msa0253230 | -0.800374 | 1.485430e-48 | -8.615850e-47 |
| Msa0044310 | Msa0261350 | -0.809267 | 2.059356e-50 | -8.615850e-47 |
| Msa0044310 | Msa0266330 | -0.802929 | 4.442803e-49 | -8.615850e-47 |
| Msa0044310 | Msa0275980 | -0.803177 | 3.948372e-49 | -8.615850e-47 |
| Msa0044310 | Msa0279810 | 0.808120 | 3.619667e-50 | -8.615850e-47 |
| Msa0044310 | Msa0299130 | -0.816226 | 6.166974e-52 | -8.615850e-47 |
| Msa0044310 | Msa0300130 | -0.813419 | 2.584234e-51 | -8.615850e-47 |
| Msa0044310 | Msa0307630 | 0.800535 | 1.377130e-48 | -8.615850e-47 |
| Msa0044310 | Msa0319220 | 0.810695 | 1.014546e-50 | -8.615850e-47 |
| Msa0044310 | Msa0340700 | -0.808969 | 2.384537e-50 | -8.615850e-47 |
| Msa0044310 | Msa0341950 | -0.804842 | 1.778917e-49 | -8.615850e-47 |
| Msa0044310 | Msa0354600 | 0.809291 | 2.034826e-50 | -8.615850e-47 |
| Msa0044310 | Msa0380470 | -0.804866 | 1.758723e-49 | -8.615850e-47 |
| Msa0044310 | Msa0382050 | -0.804790 | 1.823655e-49 | -8.615850e-47 |
| Msa0044310 | Msa0386880 | 0.804333 | 2.271465e-49 | -8.615850e-47 |
| Msa0044310 | Msa0386910 | 0.803532 | 3.332933e-49 | -8.615850e-47 |
| Msa0044310 | Msa0428270 | -0.802343 | 5.867706e-49 | -8.615850e-47 |
| Msa0044310 | Msa0429990 | -0.802086 | 6.629888e-49 | -8.615850e-47 |
| Msa0044310 | Msa0431550 | -0.802724 | 4.898377e-49 | -8.615850e-47 |
| Msa0044310 | Msa0462410 | 0.800681 | 1.286110e-48 | -8.615850e-47 |
| Msa0044310 | Msa0467170 | 0.829693 | 4.462388e-55 | -8.615850e-47 |
| Msa0044310 | Msa0467330 | 0.834255 | 3.332267e-56 | -8.615850e-47 |
| Msa0044310 | Msa0474660 | -0.817093 | 3.943195e-52 | -8.615850e-47 |
| Msa0044310 | Msa0478080 | 0.806979 | 6.322481e-50 | -8.615850e-47 |
| Msa0044310 | Msa0492330 | -0.823962 | 1.044222e-53 | -8.615850e-47 |
| Msa0044310 | Msa0500580 | -0.814740 | 1.320525e-51 | -8.615850e-47 |
| Msa0044310 | Msa0506700 | -0.800472 | 1.418540e-48 | -8.615850e-47 |
| Msa0044310 | Msa0506750 | 0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0044310 | Msa0525880 | 0.826623 | 2.450568e-54 | -8.615850e-47 |
| Msa0044310 | Msa0528180 | 0.841837 | 3.729091e-58 | -8.615850e-47 |
| Msa0044310 | Msa0546590 | 0.800112 | 1.679060e-48 | -8.615850e-47 |
| Msa0044310 | Msa0561450 | -0.808649 | 2.791312e-50 | -8.615850e-47 |
| Msa0044310 | Msa0561830 | 0.802972 | 4.353595e-49 | -8.615850e-47 |
| Msa0044310 | Msa0562730 | 0.821393 | 4.136087e-53 | -8.615850e-47 |
| Msa0044310 | Msa0567330 | 0.824808 | 6.602968e-54 | -8.615850e-47 |
| Msa0044310 | Msa0567570 | 0.837365 | 5.426325e-57 | -8.615850e-47 |
| Msa0044310 | Msa0570050 | 0.808758 | 2.646441e-50 | -8.615850e-47 |
| Msa0044310 | Msa0576320 | 0.823182 | 1.589300e-53 | -8.615850e-47 |
| Msa0044310 | Msa0580380 | 0.806694 | 7.265388e-50 | -8.615850e-47 |
| Msa0044310 | Msa0580890 | -0.803268 | 3.780725e-49 | -8.615850e-47 |
| Msa0044310 | Msa0589000 | 0.811832 | 5.747495e-51 | -8.615850e-47 |
| Msa0044310 | Msa0589060 | 0.817231 | 3.671439e-52 | -8.615850e-47 |
| Msa0044310 | Msa0597370 | -0.801221 | 9.973073e-49 | -8.615850e-47 |
| Msa0044310 | Msa0604190 | 0.813010 | 3.177230e-51 | -8.615850e-47 |
| Msa0044310 | Msa0606820 | 0.804891 | 1.737818e-49 | -8.615850e-47 |
| Msa0044310 | Msa0614960 | 0.805683 | 1.185616e-49 | -8.615850e-47 |
| Msa0044310 | Msa0615460 | -0.808876 | 2.496584e-50 | -8.615850e-47 |
| Msa0044310 | Msa0645390 | 0.803724 | 3.041286e-49 | -8.615850e-47 |
| Msa0044310 | Msa0654850 | -0.829449 | 5.114913e-55 | -8.615850e-47 |
| Msa0044310 | Msa0655370 | 0.816514 | 5.317831e-52 | -8.615850e-47 |
| Msa0044310 | Msa0661480 | 0.819071 | 1.407544e-52 | -8.615850e-47 |
| Msa0044310 | Msa0662460 | 0.828417 | 9.096027e-55 | -8.615850e-47 |
| Msa0044310 | Msa0666950 | 0.816316 | 5.889675e-52 | -8.615850e-47 |
| Msa0044310 | Msa0684030 | -0.807445 | 5.036352e-50 | -8.615850e-47 |
| Msa0044310 | Msa0684400 | -0.804958 | 1.682536e-49 | -8.615850e-47 |
| Msa0044310 | Msa0685020 | 0.804065 | 2.582822e-49 | -8.615850e-47 |
| Msa0044310 | Msa0685060 | 0.802649 | 5.076547e-49 | -8.615850e-47 |
| Msa0044310 | Msa0698510 | -0.814307 | 1.646907e-51 | -8.615850e-47 |
| Msa0044310 | Msa0698680 | -0.806453 | 8.166318e-50 | -8.615850e-47 |
| Msa0044310 | Msa0699170 | 0.821121 | 4.778514e-53 | -8.615850e-47 |
| Msa0044310 | Msa0727510 | 0.828141 | 1.060303e-54 | -8.615850e-47 |
| Msa0044310 | Msa0732040 | 0.818417 | 1.982213e-52 | -8.615850e-47 |
| Msa0044310 | Msa0753590 | -0.821429 | 4.056570e-53 | -8.615850e-47 |
| Msa0044310 | Msa0764840 | 0.808635 | 2.810976e-50 | -8.615850e-47 |
| Msa0044310 | Msa0766170 | 0.806004 | 1.015485e-49 | -8.615850e-47 |
| Msa0044310 | Msa0766910 | -0.801750 | 7.770083e-49 | -8.615850e-47 |
| Msa0044310 | Msa0768700 | 0.827141 | 1.843185e-54 | -8.615850e-47 |
| Msa0044310 | Msa0789340 | 0.803892 | 2.805535e-49 | -8.615850e-47 |
| Msa0044310 | Msa0792410 | 0.800089 | 1.697173e-48 | -8.615850e-47 |
| Msa0044310 | Msa0802600 | 0.819200 | 1.316077e-52 | -8.615850e-47 |
| Msa0044310 | Msa0833200 | -0.824526 | 7.695009e-54 | -8.615850e-47 |
| Msa0044310 | Msa0841520 | 0.820640 | 6.163600e-53 | -8.615850e-47 |
| Msa0044310 | Msa0845670 | 0.811834 | 5.742678e-51 | -8.615850e-47 |
| Msa0044310 | Msa0868500 | -0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0044310 | Msa0868510 | -0.803295 | 3.731174e-49 | -8.615850e-47 |
| Msa0044310 | Msa0882480 | -0.807434 | 5.064109e-50 | -8.615850e-47 |
| Msa0044310 | Msa0910170 | 0.805769 | 1.137540e-49 | -8.615850e-47 |
| Msa0044310 | Msa0935840 | -0.822648 | 2.116595e-53 | -8.615850e-47 |
| Msa0044310 | Msa0945030 | 0.809730 | 1.638099e-50 | -8.615850e-47 |
| Msa0044310 | Msa0945160 | -0.800977 | 1.118898e-48 | -8.615850e-47 |
| Msa0044310 | Msa0958960 | -0.803188 | 3.926506e-49 | -8.615850e-47 |
| Msa0044310 | Msa0964400 | -0.833407 | 5.430044e-56 | -8.615850e-47 |
| Msa0044310 | Msa0973010 | -0.826373 | 2.811978e-54 | -8.615850e-47 |
| Msa0044310 | Msa0978550 | -0.801486 | 8.803761e-49 | -8.615850e-47 |
| Msa0044310 | Msa0999240 | 0.846997 | 1.527444e-59 | -8.615850e-47 |
| Msa0044310 | Msa1002550 | -0.821549 | 3.806516e-53 | -8.615850e-47 |
| Msa0044310 | Msa1028890 | -0.802389 | 5.742879e-49 | -8.615850e-47 |
| Msa0044310 | Msa1029840 | 0.820486 | 6.688598e-53 | -8.615850e-47 |
| Msa0044310 | Msa1029850 | 0.806904 | 6.558837e-50 | -8.615850e-47 |
| Msa0044310 | Msa1029860 | 0.807939 | 3.955318e-50 | -8.615850e-47 |
| Msa0044310 | Msa1030210 | 0.806353 | 8.573885e-50 | -8.615850e-47 |
| Msa0044310 | Msa1031190 | -0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa0044310 | Msa1036260 | -0.805531 | 1.276112e-49 | -8.615850e-47 |
| Msa0044310 | Msa1068710 | 0.807061 | 6.073953e-50 | -8.615850e-47 |
| Msa0044310 | Msa1068960 | 0.809802 | 1.580116e-50 | -8.615850e-47 |
| Msa0044310 | Msa1069250 | 0.819403 | 1.182762e-52 | -8.615850e-47 |
| Msa0044310 | Msa1070370 | -0.807862 | 4.107511e-50 | -8.615850e-47 |
| Msa0044310 | Msa1078120 | -0.816792 | 4.607469e-52 | -8.615850e-47 |
| Msa0044310 | Msa1119420 | -0.804357 | 2.245540e-49 | -8.615850e-47 |
| Msa0044310 | Msa1120960 | 0.825575 | 4.349904e-54 | -8.615850e-47 |
| Msa0044310 | Msa1130150 | -0.822294 | 2.557840e-53 | -8.615850e-47 |
| Msa0044310 | Msa1136760 | 0.827403 | 1.595204e-54 | -8.615850e-47 |
| Msa0044310 | Msa1149910 | 0.818068 | 2.377062e-52 | -8.615850e-47 |
| Msa0044310 | Msa1156100 | -0.803418 | 3.519567e-49 | -8.615850e-47 |
| Msa0044310 | Msa1156430 | -0.805254 | 1.458583e-49 | -8.615850e-47 |
| Msa0044310 | Msa1156720 | 0.808859 | 2.517414e-50 | -8.615850e-47 |
| Msa0044310 | Msa1156730 | 0.835129 | 2.008317e-56 | -8.615850e-47 |
| Msa0044310 | Msa1158180 | -0.805555 | 1.261574e-49 | -8.615850e-47 |
| Msa0044310 | Msa1164450 | 0.804956 | 1.683680e-49 | -8.615850e-47 |
| Msa0044310 | Msa1185270 | 0.814952 | 1.185508e-51 | -8.615850e-47 |
| Msa0044310 | Msa1203320 | -0.803110 | 4.075323e-49 | -8.615850e-47 |
| Msa0044310 | Msa1212150 | -0.803996 | 2.670240e-49 | -8.615850e-47 |
| Msa0044310 | Msa1219830 | 0.805163 | 1.524031e-49 | -8.615850e-47 |
| Msa0044310 | Msa1223960 | 0.809054 | 2.287270e-50 | -8.615850e-47 |
| Msa0044310 | Msa1223990 | 0.824524 | 7.702570e-54 | -8.615850e-47 |
| Msa0044310 | Msa1239210 | 0.809173 | 2.156696e-50 | -8.615850e-47 |
| Msa0044310 | Msa1263110 | 0.823583 | 1.280832e-53 | -8.615850e-47 |
| Msa0044310 | Msa1269730 | -0.805433 | 1.338040e-49 | -8.615850e-47 |
| Msa0044310 | Msa1273320 | 0.802070 | 6.677986e-49 | -8.615850e-47 |
| Msa0044310 | Msa1279060 | 0.801513 | 8.689047e-49 | -8.615850e-47 |
| Msa0044310 | Msa1303690 | -0.801544 | 8.565176e-49 | -8.615850e-47 |
| Msa0044310 | Msa1341710 | -0.801952 | 7.063852e-49 | -8.615850e-47 |
| Msa0044310 | Msa1350590 | -0.802861 | 4.588889e-49 | -8.615850e-47 |
| Msa0044310 | Msa1363170 | -0.802769 | 4.793260e-49 | -8.615850e-47 |
| Msa0044310 | Msa1368420 | 0.810544 | 1.093388e-50 | -8.615850e-47 |
| Msa0044310 | Msa1383220 | 0.808343 | 3.245270e-50 | -8.615850e-47 |
| Msa0044310 | Msa1386910 | -0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0044310 | Msa1395380 | -0.802901 | 4.501757e-49 | -8.615850e-47 |
| Msa0044310 | Msa1398140 | 0.836429 | 9.406459e-57 | -8.615850e-47 |
| Msa0044310 | Msa1405040 | -0.832156 | 1.109932e-55 | -8.615850e-47 |
| Msa0044310 | Msa1405830 | 0.829159 | 6.017614e-55 | -8.615850e-47 |
| Msa0044310 | Msa1407810 | 0.833859 | 4.186812e-56 | -8.615850e-47 |
| Msa0044310 | Msa1408230 | -0.803200 | 3.904164e-49 | -8.615850e-47 |
| Msa0044310 | Msa1412330 | -0.823083 | 1.676571e-53 | -8.615850e-47 |
| Msa0044310 | Msa1432360 | 0.834537 | 2.830131e-56 | -8.615850e-47 |
| Msa0044310 | Msa1433360 | 0.809021 | 2.324140e-50 | -8.615850e-47 |
| Msa0044310 | Msa1437780 | 0.834389 | 3.083388e-56 | -8.615850e-47 |
| Msa0044310 | Msa1455200 | 0.816624 | 5.025378e-52 | -8.615850e-47 |
| Msa0044310 | Msa1460520 | 0.806264 | 8.952256e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044310 | MtrunA17_Chr1g0210851 | 97.125 | 626 | 6 | 1 | 1 | 614 | 486 | 1111 | 0.0 | 1258 |
| Msa0044310 | MtrunA17_Chr7g0271481 | 38.756 | 627 | 360 | 5 | 5 | 610 | 396 | 1019 | 2.76e-144 | 444 |
| Msa0044310 | MtrunA17_Chr4g0026291 | 24.409 | 254 | 160 | 6 | 73 | 301 | 155 | 401 | 5.56e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0044310 | AT3G44340.1 | 77.120 | 625 | 129 | 3 | 1 | 612 | 472 | 1095 | 0.0 | 1021 |
| Msa0044310 | AT3G44340.4 | 77.120 | 625 | 129 | 3 | 1 | 612 | 472 | 1095 | 0.0 | 1021 |
| Msa0044310 | AT3G44340.3 | 77.120 | 625 | 129 | 3 | 1 | 612 | 472 | 1095 | 0.0 | 1021 |
| Msa0044310 | AT4G32640.2 | 76.282 | 624 | 123 | 3 | 1 | 612 | 469 | 1079 | 0.0 | 1002 |
| Msa0044310 | AT4G32640.1 | 76.282 | 624 | 123 | 3 | 1 | 612 | 469 | 1079 | 0.0 | 1002 |
| Msa0044310 | AT3G44340.5 | 77.311 | 595 | 122 | 2 | 1 | 583 | 472 | 1065 | 0.0 | 977 |
| Msa0044310 | AT3G44340.2 | 77.311 | 595 | 122 | 2 | 1 | 583 | 472 | 1065 | 0.0 | 977 |
| Msa0044310 | AT3G07100.1 | 35.079 | 630 | 381 | 5 | 5 | 611 | 414 | 1038 | 1.77e-127 | 400 |
| Msa0044310 | AT2G27460.1 | 22.346 | 358 | 211 | 12 | 73 | 374 | 153 | 499 | 7.04e-12 | 68.9 |
Find 147 sgRNAs with CRISPR-Local
Find 613 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCAACTCCCACCTTTGTATT+AGG | 0.189796 | 1_1:-75846682 | None:intergenic |
| AGATCGATGAACGGTCATTT+TGG | 0.241137 | 1_1:+75853085 | Msa0044310:CDS |
| CTCACCCATCATTGGGTACT+TGG | 0.247677 | 1_1:-75855147 | None:intergenic |
| TGGGGTTTGCTCTATCATTT+AGG | 0.264466 | 1_1:-75855127 | None:intergenic |
| TGTACAGAGGCAAAAGCTTT+AGG | 0.282358 | 1_1:-75852550 | None:intergenic |
| CAACTCCCACCTTTGTATTA+GGG | 0.293126 | 1_1:-75846681 | None:intergenic |
| CAAAGCCACTTCCTCTTGTT+CGG | 0.293201 | 1_1:+75852429 | Msa0044310:CDS |
| ATTCAGAAGTTCTATTACTT+TGG | 0.305920 | 1_1:-75847532 | None:intergenic |
| TCTTCAGTCTTGCCATCTAT+TGG | 0.312153 | 1_1:+75849218 | Msa0044310:intron |
| GTCTGTAATAACTTGACTTA+TGG | 0.328254 | 1_1:-75845585 | None:intergenic |
| AGATCGTTGTAAAGCTTTGC+AGG | 0.330601 | 1_1:-75850758 | None:intergenic |
| ACCTGTCCACCTGTAGTTCT+TGG | 0.332905 | 1_1:-75849985 | None:intergenic |
| CTTCTATACACAACTGTGTA+TGG | 0.334984 | 1_1:+75852045 | Msa0044310:CDS |
| TGTTGCTACTAAAGAATTCA+TGG | 0.343661 | 1_1:+75845053 | Msa0044310:CDS |
| CAGAATTTCTCACCCATCAT+TGG | 0.345959 | 1_1:-75855155 | None:intergenic |
| TAGGCAAATCCAGAATAAAA+TGG | 0.348350 | 1_1:+75855057 | Msa0044310:CDS |
| TGCCATAATATTCTTGTACT+TGG | 0.351423 | 1_1:-75850924 | None:intergenic |
| AGTTGAACTTGCTGAGTATC+AGG | 0.362249 | 1_1:+75849761 | Msa0044310:CDS |
| GTACAGAGGCAAAAGCTTTA+GGG | 0.370489 | 1_1:-75852549 | None:intergenic |
| ATCCAAGTACAAGAATATTA+TGG | 0.370630 | 1_1:+75850922 | Msa0044310:CDS |
| GATATTGTGCGGAAAATATT+CGG | 0.370718 | 1_1:+75853597 | Msa0044310:CDS |
| AGCTTTACAACGATCTTAGA+TGG | 0.370837 | 1_1:+75850765 | Msa0044310:CDS |
| TTGCAAACTGATGTAATTGT+TGG | 0.380991 | 1_1:+75847333 | Msa0044310:CDS |
| AATGTCATTCTTCTCGTATA+TGG | 0.388207 | 1_1:+75854979 | Msa0044310:CDS |
| TGACTGTGACAAAACTTTCA+TGG | 0.392091 | 1_1:+75851831 | Msa0044310:CDS |
| AGAACTTCTGAATCGGCCTT+TGG | 0.395304 | 1_1:+75847542 | Msa0044310:CDS |
| CCAACAGATGTTGACTTACC+TGG | 0.400591 | 1_1:+75850964 | Msa0044310:CDS |
| GAAACATGACGATAAGTTGC+AGG | 0.403519 | 1_1:+75851861 | Msa0044310:CDS |
| AGTTCTTGGGATGGTCGATA+TGG | 0.403804 | 1_1:-75849971 | None:intergenic |
| AGTTTCTTGTCCATGTTCAT+AGG | 0.404256 | 1_1:+75855038 | Msa0044310:CDS |
| GTCTTGCCATCTATTGGCAT+TGG | 0.409331 | 1_1:+75849224 | Msa0044310:intron |
| TTACTAAGCATACTCGTAAC+AGG | 0.411878 | 1_1:-75852102 | None:intergenic |
| TCACCCATCATTGGGTACTT+GGG | 0.412104 | 1_1:-75855146 | None:intergenic |
| AGAGATGTTTGTTCTACCTT+CGG | 0.413419 | 1_1:-75849267 | None:intergenic |
| AAAGCCACTTCCTCTTGTTC+GGG | 0.419027 | 1_1:+75852430 | Msa0044310:CDS |
| TGTTCTTAACCCTGTACTCT+TGG | 0.427891 | 1_1:-75853055 | None:intergenic |
| GCATCTCTACGTCGACCATC+TGG | 0.429396 | 1_1:-75844991 | None:intergenic |
| AGTTGATGAAATTCCTCATC+TGG | 0.431398 | 1_1:+75853629 | Msa0044310:CDS |
| GCAAAGGAGTATAAACATCT+TGG | 0.431885 | 1_1:-75847314 | None:intergenic |
| AAACATCTCTGCAGGGGAAA+AGG | 0.437564 | 1_1:+75849280 | Msa0044310:CDS |
| CCTGTCCACCTGTAGTTCTT+GGG | 0.437592 | 1_1:-75849984 | None:intergenic |
| TCTGTTCCGTGCTGCTGACT+TGG | 0.445096 | 1_1:+75852125 | Msa0044310:CDS |
| ACAAGAGGAAGTGGCTTTGA+AGG | 0.450302 | 1_1:-75852425 | None:intergenic |
| CATGATTGTTTAATATATGT+TGG | 0.458054 | 1_1:+75853558 | Msa0044310:CDS |
| CTCCAGTGTCTTTCATTGCA+AGG | 0.461418 | 1_1:-75848521 | None:intergenic |
| TCATGAATAGCCACCATCCT+AGG | 0.461505 | 1_1:-75853159 | None:intergenic |
| ATCCGGACAACTTATTCTTC+CGG | 0.463390 | 1_1:+75852523 | Msa0044310:CDS |
| CTTCGGCTTCGCGTGCAGAA+AGG | 0.463540 | 1_1:-75849250 | None:intergenic |
| TTCGGCTTCGCGTGCAGAAA+GGG | 0.465425 | 1_1:-75849249 | None:intergenic |
| AGTGAACATGTTAACGATGA+TGG | 0.466947 | 1_1:+75853513 | Msa0044310:CDS |
| CTGGCAGGTTTAAGCTCTGC+AGG | 0.467185 | 1_1:+75854312 | Msa0044310:intron |
| AAATTGCTGTTGGTGATAGT+TGG | 0.471326 | 1_1:+75855265 | Msa0044310:three_prime_UTR |
| AGAATTTCTCACCCATCATT+GGG | 0.472213 | 1_1:-75855154 | None:intergenic |
| CAATACCGCTTGTGTATCCT+AGG | 0.472292 | 1_1:+75853142 | Msa0044310:CDS |
| GGAATCTATCTTCTTGAGAA+TGG | 0.473771 | 1_1:+75853534 | Msa0044310:CDS |
| AGGGCACCAATGCCAATAGA+TGG | 0.474703 | 1_1:-75849230 | None:intergenic |
| CACCCATCATTGGGTACTTG+GGG | 0.479132 | 1_1:-75855145 | None:intergenic |
| CTATTACTTTGGAACATGGT+AGG | 0.483860 | 1_1:-75847521 | None:intergenic |
| TGTTGGAGACTCTGTGAGTC+CGG | 0.484030 | 1_1:+75853575 | Msa0044310:CDS |
| GGTAGAACAAACATCTCTGC+AGG | 0.484395 | 1_1:+75849272 | Msa0044310:CDS |
| TCAATGAATGCTGTTCAAAC+TGG | 0.486121 | 1_1:+75845539 | Msa0044310:CDS |
| GGATCAGAAAGAGCTGAGAA+TGG | 0.488318 | 1_1:-75850737 | None:intergenic |
| GTATAAACATCTTGGACATC+AGG | 0.488602 | 1_1:-75847306 | None:intergenic |
| GGCCTTTGGTGCAGCAATCA+AGG | 0.490870 | 1_1:+75847556 | Msa0044310:CDS |
| AAGTAATAGAACTTCTGAAT+CGG | 0.491268 | 1_1:+75847535 | Msa0044310:CDS |
| GGCAAAAGCTTTAGGGCCTC+CGG | 0.493439 | 1_1:-75852542 | None:intergenic |
| GCTACCGTTTCTTCATCATC+CGG | 0.496714 | 1_1:+75852506 | Msa0044310:CDS |
| TCTGGATTTGCCTATGAACA+TGG | 0.498122 | 1_1:-75855048 | None:intergenic |
| TCAGCGTTGACCAAGAGTAC+AGG | 0.501592 | 1_1:+75853045 | Msa0044310:intron |
| GAAGTAATTCTAAATGTTGA+CGG | 0.503315 | 1_1:-75847487 | None:intergenic |
| AAAATAGTGCATTGATGCAA+AGG | 0.503674 | 1_1:-75852466 | None:intergenic |
| CTCCGGAAGAATAAGTTGTC+CGG | 0.511164 | 1_1:-75852525 | None:intergenic |
| ACCGTTCCTCTACATAGCTC+AGG | 0.512395 | 1_1:-75845024 | None:intergenic |
| AGGTTTAAGCTCTGCAGGAA+AGG | 0.513652 | 1_1:+75854317 | Msa0044310:intron |
| CACTGCAATTTGGGTCCAGA+TGG | 0.517740 | 1_1:+75844976 | None:intergenic |
| AGTTGAGAACCACACCTGAC+TGG | 0.518547 | 1_1:-75848560 | None:intergenic |
| CCCAAGAACTACAGGTGGAC+AGG | 0.519733 | 1_1:+75849984 | Msa0044310:CDS |
| TACCTTGATTGCTGCACCAA+AGG | 0.520567 | 1_1:-75847558 | None:intergenic |
| AACTTCTCTCTCTGCTCCAT+TGG | 0.522036 | 1_1:+75853119 | Msa0044310:CDS |
| AAACCCCAAGTACCCAATGA+TGG | 0.522974 | 1_1:+75855142 | Msa0044310:three_prime_UTR |
| CAGGTAAGTCAACATCTGTT+GGG | 0.526165 | 1_1:-75850963 | None:intergenic |
| CCAGGTAAGTCAACATCTGT+TGG | 0.527332 | 1_1:-75850964 | None:intergenic |
| TGCAGGAAAGGTGATCCATC+AGG | 0.528640 | 1_1:+75854329 | Msa0044310:CDS |
| TATTCATGATCTTGACTCAA+AGG | 0.530953 | 1_1:+75853173 | Msa0044310:CDS |
| TTCCTTGCAATGAAAGACAC+TGG | 0.533327 | 1_1:+75848519 | Msa0044310:CDS |
| AAGAAGTACACAGCAGGCAT+TGG | 0.533461 | 1_1:-75845503 | None:intergenic |
| CAGCGTTGACCAAGAGTACA+GGG | 0.536978 | 1_1:+75853046 | Msa0044310:intron |
| TTCGAAGAAGTTAAATGATG+TGG | 0.541068 | 1_1:+75854157 | Msa0044310:intron |
| TGTTCCCGAACAAGAGGAAG+TGG | 0.543709 | 1_1:-75852434 | None:intergenic |
| CTTGAAACGTGCATTGCAGC+AGG | 0.546914 | 1_1:+75846735 | Msa0044310:CDS |
| AACATAGAAATTACCAGATG+AGG | 0.547006 | 1_1:-75853642 | None:intergenic |
| GATCAGAAAGAGCTGAGAAT+GGG | 0.549447 | 1_1:-75850736 | None:intergenic |
| GTCACTTGTTCCCGAACAAG+AGG | 0.558365 | 1_1:-75852440 | None:intergenic |
| TTAACATGTTCACTAGAAAG+AGG | 0.560031 | 1_1:-75853504 | None:intergenic |
| TCGACCATCCCAAGAACTAC+AGG | 0.560220 | 1_1:+75849976 | Msa0044310:CDS |
| AGTACAGGGTTAAGAACAGA+GGG | 0.560340 | 1_1:+75853060 | Msa0044310:CDS |
| TCCACCTGTAGTTCTTGGGA+TGG | 0.561294 | 1_1:-75849980 | None:intergenic |
| CAACAGATGTTGACTTACCT+GGG | 0.563663 | 1_1:+75850965 | Msa0044310:CDS |
| ATGATGTGGTGAATGAGATT+CGG | 0.565678 | 1_1:+75854171 | Msa0044310:CDS |
| AATGCGTGTGAGGTGCAGTC+AGG | 0.567759 | 1_1:+75850820 | Msa0044310:CDS |
| CTTTCTGCACGCGAAGCCGA+AGG | 0.569147 | 1_1:+75849251 | Msa0044310:CDS |
| CATGTTCACTAGAAAGAGGT+AGG | 0.572150 | 1_1:-75853500 | None:intergenic |
| TTGTCCGGATGATGAAGAAA+CGG | 0.574956 | 1_1:-75852510 | None:intergenic |
| ATTAGAAAGAAGTACACAGC+AGG | 0.576702 | 1_1:-75845509 | None:intergenic |
| TTCACTAGAAAGAGGTAGGA+AGG | 0.577778 | 1_1:-75853496 | None:intergenic |
| TACACAAGCGGTATTGCCAA+TGG | 0.581149 | 1_1:-75853135 | None:intergenic |
| TTCTATACACAACTGTGTAT+GGG | 0.584274 | 1_1:+75852046 | Msa0044310:CDS |
| ACAATTACATCAGTTTGCAA+AGG | 0.585966 | 1_1:-75847330 | None:intergenic |
| AACCCCAAGTACCCAATGAT+GGG | 0.586290 | 1_1:+75855143 | Msa0044310:three_prime_UTR |
| ACCGCTTGTGTATCCTAGGA+TGG | 0.595718 | 1_1:+75853146 | Msa0044310:CDS |
| ACACAGCAGGCATTGGCTCA+CGG | 0.603215 | 1_1:-75845496 | None:intergenic |
| AGACACTGGAGGGAAGCTGT+TGG | 0.603613 | 1_1:+75848533 | Msa0044310:CDS |
| ATGGACAAGAAACTCTACAT+AGG | 0.604909 | 1_1:-75855029 | None:intergenic |
| CTAGAAAGAGGTAGGAAGGA+CGG | 0.605054 | 1_1:-75853492 | None:intergenic |
| GCCTGAGCTATGTAGAGGAA+CGG | 0.605938 | 1_1:+75845023 | Msa0044310:CDS |
| GAAGGCCCTAATACAAAGGT+GGG | 0.606579 | 1_1:+75846676 | Msa0044310:CDS |
| AGTTCTATTACTTTGGAACA+TGG | 0.612944 | 1_1:-75847525 | None:intergenic |
| ACAGGAAGGCCCTAATACAA+AGG | 0.614202 | 1_1:+75846672 | Msa0044310:intron |
| TTGCAATGAAAGACACTGGA+GGG | 0.616250 | 1_1:+75848523 | Msa0044310:CDS |
| ATGGTAGAAGACAAGAGCGC+AGG | 0.616316 | 1_1:+75854998 | Msa0044310:CDS |
| GTAGAAGACAAGAGCGCAGG+TGG | 0.616802 | 1_1:+75855001 | Msa0044310:CDS |
| GAGTACAGGGTTAAGAACAG+AGG | 0.621383 | 1_1:+75853059 | Msa0044310:CDS |
| ACTCAAGCAAACGAAGAATG+TGG | 0.622936 | 1_1:-75855187 | None:intergenic |
| GGAAGGCCCTAATACAAAGG+TGG | 0.624953 | 1_1:+75846675 | Msa0044310:intron |
| CATGACGATAAGTTGCAGGA+TGG | 0.626796 | 1_1:+75851865 | Msa0044310:CDS |
| TCAGGAACAATGAGCATCAG+TGG | 0.626806 | 1_1:-75847288 | None:intergenic |
| GTAGAACAAACATCTCTGCA+GGG | 0.627768 | 1_1:+75849273 | Msa0044310:CDS |
| TGGAATGTCACTAGGCCACA+AGG | 0.630352 | 1_1:+75850785 | Msa0044310:CDS |
| CGGACAACTTATTCTTCCGG+AGG | 0.631326 | 1_1:+75852526 | Msa0044310:CDS |
| TTGAGGCTGTAATGCGTGTG+AGG | 0.633488 | 1_1:+75850810 | Msa0044310:CDS |
| TGTAATTGTTGGACTATCCG+AGG | 0.634338 | 1_1:+75847344 | Msa0044310:CDS |
| ATGTATAAGTAAATTGCTGT+TGG | 0.643479 | 1_1:+75855255 | Msa0044310:three_prime_UTR |
| ACCATCCCAAGAACTACAGG+TGG | 0.645597 | 1_1:+75849979 | Msa0044310:CDS |
| GAGAAGCCTGAGCTATGTAG+AGG | 0.646821 | 1_1:+75845018 | Msa0044310:CDS |
| ATCTTAGATGGAATGTCACT+AGG | 0.647594 | 1_1:+75850777 | Msa0044310:CDS |
| CTGTGAGTCCGGATATTGTG+CGG | 0.653397 | 1_1:+75853586 | Msa0044310:CDS |
| ACTTATGGCACTGCAAGCTG+CGG | 0.655728 | 1_1:-75845570 | None:intergenic |
| TAGAACAAACATCTCTGCAG+GGG | 0.662589 | 1_1:+75849274 | Msa0044310:CDS |
| CAGAGGGAAAGATCGATGAA+CGG | 0.665566 | 1_1:+75853076 | Msa0044310:CDS |
| GCTTGTGTATCCTAGGATGG+TGG | 0.671261 | 1_1:+75853149 | Msa0044310:CDS |
| ATTACAGCCTCAAAACCTTG+TGG | 0.683430 | 1_1:-75850800 | None:intergenic |
| GAGTATCCAAGTCAGCAGCA+CGG | 0.688500 | 1_1:-75852131 | None:intergenic |
| CTTGCAATGAAAGACACTGG+AGG | 0.695369 | 1_1:+75848522 | Msa0044310:CDS |
| AACAGATGTTGACTTACCTG+GGG | 0.704099 | 1_1:+75850966 | Msa0044310:CDS |
| ATGTGGTGAATGAGATTCGG+CGG | 0.707554 | 1_1:+75854174 | Msa0044310:CDS |
| ACCATCCTAGGATACACAAG+CGG | 0.730174 | 1_1:-75853147 | None:intergenic |
| AACATACCAAGTGTGTACAG+AGG | 0.735171 | 1_1:-75852563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAATTCTTATTGTT+AGG | + | chr1_1:75846255-75846274 | Msa0044310:intron | 10.0% |
| !! | AAATTAAATTCTTATTGTTA+GGG | + | chr1_1:75846256-75846275 | Msa0044310:intron | 10.0% |
| !! | TTTAAACTGAATTAAAATAT+GGG | - | chr1_1:75846841-75846860 | None:intergenic | 10.0% |
| !! | ATTTAAACTGAATTAAAATA+TGG | - | chr1_1:75846842-75846861 | None:intergenic | 10.0% |
| !! | ATTAAGGATATATAATATTT+AGG | + | chr1_1:75846872-75846891 | Msa0044310:intron | 10.0% |
| !! | TTGTATACTATATATTTAAT+TGG | + | chr1_1:75846995-75847014 | Msa0044310:intron | 10.0% |
| !!! | AATTTAAATGATTTATGTTT+TGG | + | chr1_1:75847876-75847895 | Msa0044310:intron | 10.0% |
| !!! | ATTTAAATGATTTATGTTTT+GGG | + | chr1_1:75847877-75847896 | Msa0044310:intron | 10.0% |
| !!! | ATAAAAAATGATTTTATTGT+TGG | + | chr1_1:75847956-75847975 | Msa0044310:intron | 10.0% |
| !!! | TATTTGTTATAGTTTATTTA+TGG | + | chr1_1:75852617-75852636 | Msa0044310:intron | 10.0% |
| !!! | ATTTGTTATAGTTTATTTAT+GGG | + | chr1_1:75852618-75852637 | Msa0044310:intron | 10.0% |
| !!! | TGTAAATTTTTTATAATATC+TGG | + | chr1_1:75854293-75854312 | Msa0044310:intron | 10.0% |
| !! | ATTAAAATTAATTTAGATCA+TGG | + | chr1_1:75854412-75854431 | Msa0044310:intron | 10.0% |
| !!! | TAAAATAATTGAATTTTTTG+AGG | + | chr1_1:75854499-75854518 | Msa0044310:intron | 10.0% |
| !!! | TAAATTTTATGAAAAAATAG+AGG | + | chr1_1:75855376-75855395 | Msa0044310:three_prime_UTR | 10.0% |
| !!! | AGTTTATTTTGTTTTTGTTT+TGG | - | chr1_1:75845791-75845810 | None:intergenic | 15.0% |
| !!! | ATTTTAAACAGATTTGTAAA+TGG | - | chr1_1:75846034-75846053 | None:intergenic | 15.0% |
| !!! | AGTAATTTTTTTATATTCGA+CGG | + | chr1_1:75846450-75846469 | Msa0044310:intron | 15.0% |
| !!! | TTATTTATTTGAAATTTGAG+TGG | + | chr1_1:75846573-75846592 | Msa0044310:intron | 15.0% |
| !! | TTAAATTAGTTGCAAAATTA+AGG | + | chr1_1:75846856-75846875 | Msa0044310:intron | 15.0% |
| !! | TATTTATAATTCTTTCTGTT+TGG | + | chr1_1:75848327-75848346 | Msa0044310:intron | 15.0% |
| !! | ATTTATAATTCTTTCTGTTT+GGG | + | chr1_1:75848328-75848347 | Msa0044310:intron | 15.0% |
| !! | CAAAAACTATATCTATTAAA+TGG | - | chr1_1:75848433-75848452 | None:intergenic | 15.0% |
| !! | AAATAAATCTAGAAAAGAAT+TGG | - | chr1_1:75848708-75848727 | None:intergenic | 15.0% |
| !!! | TGTTTGTTAAAAAATTTAGT+TGG | - | chr1_1:75849006-75849025 | None:intergenic | 15.0% |
| !!! | GTAATATTATATAGTTTTGT+TGG | + | chr1_1:75849026-75849045 | Msa0044310:intron | 15.0% |
| !!! | TTTATGTTTTAAAACTATCA+TGG | + | chr1_1:75849348-75849367 | Msa0044310:intron | 15.0% |
| !!! | AAATTTTGTTATTGAATTTC+AGG | + | chr1_1:75849689-75849708 | Msa0044310:intron | 15.0% |
| !!! | ATTTTCTTTTTAGTGTTTAT+CGG | + | chr1_1:75850103-75850122 | Msa0044310:intron | 15.0% |
| !!! | AACTTTTTTTTTTTTTGTCA+GGG | + | chr1_1:75850898-75850917 | Msa0044310:intron | 15.0% |
| !! | AATTTATAAAGAGAACAAAA+GGG | - | chr1_1:75852279-75852298 | None:intergenic | 15.0% |
| !! | TAATTTATAAAGAGAACAAA+AGG | - | chr1_1:75852280-75852299 | None:intergenic | 15.0% |
| !! | TTATAATGTTGTGTAAATAA+AGG | + | chr1_1:75852591-75852610 | Msa0044310:intron | 15.0% |
| !!! | TTTAAAATATTCATTGACTT+TGG | + | chr1_1:75852809-75852828 | Msa0044310:intron | 15.0% |
| !! | AAATTAAATATCGTAACATA+TGG | - | chr1_1:75853256-75853275 | None:intergenic | 15.0% |
| !!! | ATTCAATTATTTTAGAATGT+GGG | - | chr1_1:75854493-75854512 | None:intergenic | 15.0% |
| !!! | AATTCAATTATTTTAGAATG+TGG | - | chr1_1:75854494-75854513 | None:intergenic | 15.0% |
| !!! | TTTTTACAATTGGAAATTTT+CGG | + | chr1_1:75854730-75854749 | Msa0044310:intron | 15.0% |
| !! | AAATTTACCCAAGAATTATT+AGG | - | chr1_1:75845145-75845164 | None:intergenic | 20.0% |
| !! | AAGTATAGTTAATTATACGA+TGG | + | chr1_1:75845306-75845325 | Msa0044310:intron | 20.0% |
| !! | AAAAAAACAAAGAAAAGAGA+AGG | - | chr1_1:75845406-75845425 | None:intergenic | 20.0% |
| !! | GATTATCATGAATAAATGAA+TGG | - | chr1_1:75845642-75845661 | None:intergenic | 20.0% |
| !! | GAAACTTATTCCATTTATAT+TGG | + | chr1_1:75845708-75845727 | Msa0044310:intron | 20.0% |
| !! | ACAAATTGTTTAAATTGAAC+AGG | + | chr1_1:75845813-75845832 | Msa0044310:intron | 20.0% |
| !! | CAAATTGTTTAAATTGAACA+GGG | + | chr1_1:75845814-75845833 | Msa0044310:intron | 20.0% |
| !! | ATAATTCATTGTGGAAAATA+TGG | - | chr1_1:75846090-75846109 | None:intergenic | 20.0% |
| !! | AAAGTTGTTATAATTCATTG+TGG | - | chr1_1:75846099-75846118 | None:intergenic | 20.0% |
| !! | TTAACTGCTATCATATAATT+TGG | + | chr1_1:75846405-75846424 | Msa0044310:intron | 20.0% |
| !!! | TTACTTAAGTTTCAATGTTT+TGG | - | chr1_1:75846435-75846454 | None:intergenic | 20.0% |
| !! | TCAAATAAATAAAAGAGTTC+TGG | - | chr1_1:75846565-75846584 | None:intergenic | 20.0% |
| !!! | TTTTTTCTTCTTATTACTAC+AGG | + | chr1_1:75846654-75846673 | Msa0044310:intron | 20.0% |
| !! | TAATATTTAGGTGAATTTGA+AGG | + | chr1_1:75846884-75846903 | Msa0044310:intron | 20.0% |
| !!! | GTTCTAAACTATTAGTTAAT+TGG | - | chr1_1:75847193-75847212 | None:intergenic | 20.0% |
| !!! | AAAATATTTGAAACTAACCT+CGG | - | chr1_1:75847364-75847383 | None:intergenic | 20.0% |
| !!! | TCGTTTTCTTTTCTTATTTT+CGG | + | chr1_1:75847420-75847439 | Msa0044310:intron | 20.0% |
| !! | AAAATGAAGAAATTATAGAG+TGG | - | chr1_1:75847712-75847731 | None:intergenic | 20.0% |
| !! | GGACAGTAAATAAATATATT+AGG | + | chr1_1:75847977-75847996 | Msa0044310:intron | 20.0% |
| !! | AAATGAGCATCTAAATATAA+TGG | + | chr1_1:75848739-75848758 | Msa0044310:intron | 20.0% |
| !! | AAAAGAATCGAGAAAAAAAT+CGG | - | chr1_1:75849157-75849176 | None:intergenic | 20.0% |
| !! | AAATTTATGTAATATGCAGA+TGG | - | chr1_1:75849530-75849549 | None:intergenic | 20.0% |
| !!! | TTTTTTCATCAATACTGTTA+AGG | - | chr1_1:75850130-75850149 | None:intergenic | 20.0% |
| !!! | GTAGTATTTTACACTAAAAA+AGG | + | chr1_1:75850621-75850640 | Msa0044310:intron | 20.0% |
| !!! | TAAACTTCTCATTTTTTTTC+AGG | + | chr1_1:75850700-75850719 | Msa0044310:intron | 20.0% |
| !!! | CAACTTTTTTTTTTTTTGTC+AGG | + | chr1_1:75850897-75850916 | Msa0044310:intron | 20.0% |
| !! | TCATCATAAATTAACTTTCA+AGG | - | chr1_1:75851139-75851158 | None:intergenic | 20.0% |
| !! | AGTTGTTAACTTTCAATATA+TGG | - | chr1_1:75852249-75852268 | None:intergenic | 20.0% |
| !! | ATTTATAAAGAGAACAAAAG+GGG | - | chr1_1:75852278-75852297 | None:intergenic | 20.0% |
| !!! | GTCTGTAAGTATAATAATTT+TGG | + | chr1_1:75852345-75852364 | Msa0044310:intron | 20.0% |
| !!! | ATATTTTCCGACATTTTATT+GGG | + | chr1_1:75852766-75852785 | Msa0044310:intron | 20.0% |
| !! | AGTATGATAAATATGAGATT+GGG | - | chr1_1:75853417-75853436 | None:intergenic | 20.0% |
| !! | AAGTATGATAAATATGAGAT+TGG | - | chr1_1:75853418-75853437 | None:intergenic | 20.0% |
| !!! | AATATCATTTTGTAAATTGC+AGG | + | chr1_1:75853449-75853468 | Msa0044310:intron | 20.0% |
| !! | CATGATTGTTTAATATATGT+TGG | + | chr1_1:75853558-75853577 | Msa0044310:CDS | 20.0% |
| !! | GAACTGATGAAAAATAATAT+AGG | - | chr1_1:75854066-75854085 | None:intergenic | 20.0% |
| !!! | AATTTTTTATAATATCTGGC+AGG | + | chr1_1:75854297-75854316 | Msa0044310:intron | 20.0% |
| !! | AGAATTATTGCTTATAATAC+AGG | + | chr1_1:75854362-75854381 | Msa0044310:intron | 20.0% |
| !!! | TTCAATTATTTTAGAATGTG+GGG | - | chr1_1:75854492-75854511 | None:intergenic | 20.0% |
| !!! | ATTTTGGTTTCATATAATAG+TGG | - | chr1_1:75854656-75854675 | None:intergenic | 20.0% |
| !!! | ACCATTTTCTTTTTTACAAT+TGG | + | chr1_1:75854720-75854739 | Msa0044310:intron | 20.0% |
| !! | TCCAATTGTAAAAAAGAAAA+TGG | - | chr1_1:75854724-75854743 | None:intergenic | 20.0% |
| ! | TTCATAGAGTCATGTTTATT+TGG | + | chr1_1:75845260-75845279 | Msa0044310:intron | 25.0% |
| !!! | TATTTGGTCTTTTTGTATAC+TGG | + | chr1_1:75845276-75845295 | Msa0044310:intron | 25.0% |
| !! | TAGTAAAGCACCAATATAAA+TGG | - | chr1_1:75845721-75845740 | None:intergenic | 25.0% |
| ! | CAAGCTATTATATAGTGTAA+GGG | - | chr1_1:75845873-75845892 | None:intergenic | 25.0% |
| ! | TCAAGCTATTATATAGTGTA+AGG | - | chr1_1:75845874-75845893 | None:intergenic | 25.0% |
| ! | CTCACAAATTAACGTAATAT+AGG | - | chr1_1:75845958-75845977 | None:intergenic | 25.0% |
| !!! | CTATATTACGTTAATTTGTG+AGG | + | chr1_1:75845956-75845975 | Msa0044310:intron | 25.0% |
| ! | AATATCTATAGTCTACATTG+TGG | - | chr1_1:75846235-75846254 | None:intergenic | 25.0% |
| ! | ACATACATGAAATTACTCAT+TGG | + | chr1_1:75846328-75846347 | Msa0044310:intron | 25.0% |
| ! | TTATATGATAGCAGTTAACT+TGG | - | chr1_1:75846403-75846422 | None:intergenic | 25.0% |
| ! | TAACCACAAAAAATAAAGAG+AGG | - | chr1_1:75846522-75846541 | None:intergenic | 25.0% |
| ! | TAAACTCAGTATGTTTAGTT+GGG | - | chr1_1:75846774-75846793 | None:intergenic | 25.0% |
| ! | TGGAAAAATATTAGCTACAA+GGG | + | chr1_1:75846907-75846926 | Msa0044310:intron | 25.0% |
| ! | GAAGTAATTCTAAATGTTGA+CGG | - | chr1_1:75847490-75847509 | None:intergenic | 25.0% |
| ! | ATTCAGAAGTTCTATTACTT+TGG | - | chr1_1:75847535-75847554 | None:intergenic | 25.0% |
| ! | AAGTAATAGAACTTCTGAAT+CGG | + | chr1_1:75847535-75847554 | Msa0044310:CDS | 25.0% |
| ! | CAAGTGTTCAATTGTAAAAT+GGG | - | chr1_1:75848043-75848062 | None:intergenic | 25.0% |
| ! | AGAATTATAAATACCAGTAG+AGG | - | chr1_1:75848320-75848339 | None:intergenic | 25.0% |
| !!! | TACCTTTGTTTTCTTCTTTT+AGG | + | chr1_1:75848491-75848510 | Msa0044310:intron | 25.0% |
| !!! | TTACTTTTGAAAGATGAGAA+CGG | - | chr1_1:75848959-75848978 | None:intergenic | 25.0% |
| !! | TTTTTCTGCAATTTTCTCTT+TGG | + | chr1_1:75849174-75849193 | Msa0044310:intron | 25.0% |
| !!! | TTTGGTGTTTCTCATTTTTT+CGG | + | chr1_1:75849192-75849211 | Msa0044310:intron | 25.0% |
| ! | TTTGTAAATCCTGTTGTAAT+TGG | + | chr1_1:75849434-75849453 | Msa0044310:intron | 25.0% |
| ! | TAAGTAAACAGTAACATTGT+TGG | + | chr1_1:75850037-75850056 | Msa0044310:intron | 25.0% |
| !! | TTTTCTAACACACTATCATT+GGG | - | chr1_1:75850370-75850389 | None:intergenic | 25.0% |
| !!! | GTTATTTTATCTGAAGAACT+AGG | + | chr1_1:75850436-75850455 | Msa0044310:intron | 25.0% |
| ! | AAATCATACATATTTCGTTC+TGG | - | chr1_1:75850513-75850532 | None:intergenic | 25.0% |
| ! | ATCCAAGTACAAGAATATTA+TGG | + | chr1_1:75850922-75850941 | Msa0044310:CDS | 25.0% |
| !! | CAGTATTATTTTCTAGATGT+TGG | + | chr1_1:75850990-75851009 | Msa0044310:intron | 25.0% |
| !!! | GTTTTTTTTTTTTTGAACCC+TGG | + | chr1_1:75851487-75851506 | Msa0044310:intron | 25.0% |
| !! | ACAACTTTTCAAATTGATCA+GGG | - | chr1_1:75851571-75851590 | None:intergenic | 25.0% |
| !! | AACAACTTTTCAAATTGATC+AGG | - | chr1_1:75851572-75851591 | None:intergenic | 25.0% |
| !! | TTGTAAATACAGCTTTTTGT+AGG | + | chr1_1:75851728-75851747 | Msa0044310:intron | 25.0% |
| ! | TCATAAATTACTCAGGATAA+AGG | - | chr1_1:75851931-75851950 | None:intergenic | 25.0% |
| !!! | ATTCTGTTTTTGATTGTTGT+TGG | + | chr1_1:75852217-75852236 | Msa0044310:intron | 25.0% |
| ! | ATAAATTATACCTGTTTCCA+TGG | + | chr1_1:75852292-75852311 | Msa0044310:intron | 25.0% |
| !! | AAAGGAAAAAAAGAAAGTGT+TGG | - | chr1_1:75852384-75852403 | None:intergenic | 25.0% |
| ! | AAATATCATCAACACTCAAA+AGG | - | chr1_1:75852752-75852771 | None:intergenic | 25.0% |
| !! | GATATTTTCCGACATTTTAT+TGG | + | chr1_1:75852765-75852784 | Msa0044310:intron | 25.0% |
| !! | TATTTTCCGACATTTTATTG+GGG | + | chr1_1:75852767-75852786 | Msa0044310:intron | 25.0% |
| !! | GAAGTAATCTAAAACATATC+AGG | - | chr1_1:75853793-75853812 | None:intergenic | 25.0% |
| !! | TTGGATTAATTTGAAGTCAT+AGG | + | chr1_1:75853867-75853886 | Msa0044310:intron | 25.0% |
| !! | TGGATTAATTTGAAGTCATA+GGG | + | chr1_1:75853868-75853887 | Msa0044310:intron | 25.0% |
| !!! | CTTTTTGAAAAATTGAGATG+CGG | + | chr1_1:75853977-75853996 | Msa0044310:intron | 25.0% |
| !! | AATTGTCAAAATTAGCTTAC+CGG | - | chr1_1:75854217-75854236 | None:intergenic | 25.0% |
| ! | TGTTTAATTAGCAAATGACA+TGG | - | chr1_1:75854270-75854289 | None:intergenic | 25.0% |
| ! | CAAAGAAAAAGCAACATATA+TGG | - | chr1_1:75854527-75854546 | None:intergenic | 25.0% |
| !! | GATGATAAGAAAAGTGATTT+TGG | - | chr1_1:75854672-75854691 | None:intergenic | 25.0% |
| !! | AAGGATATTAAAAGCGTAAT+AGG | - | chr1_1:75854698-75854717 | None:intergenic | 25.0% |
| ! | GTAAAAAAGAAAATGGTTGA+AGG | - | chr1_1:75854717-75854736 | None:intergenic | 25.0% |
| !! | TAGACTTGTTTAGAATATGA+AGG | + | chr1_1:75854863-75854882 | Msa0044310:intron | 25.0% |
| ! | AAGTTGAAAATAACAGAACA+AGG | - | chr1_1:75854932-75854951 | None:intergenic | 25.0% |
| !!! | TCTTAAGTTGTCTCATTTTT+CGG | - | chr1_1:75855217-75855236 | None:intergenic | 25.0% |
| ! | ATGTATAAGTAAATTGCTGT+TGG | + | chr1_1:75855255-75855274 | Msa0044310:three_prime_UTR | 25.0% |
| ! | AAAAATAGAGGCAAAATGAA+AGG | + | chr1_1:75855388-75855407 | Msa0044310:three_prime_UTR | 25.0% |
| TGTTGCTACTAAAGAATTCA+TGG | + | chr1_1:75845053-75845072 | Msa0044310:CDS | 30.0% | |
| TTACCAAGCCTAATAATTCT+TGG | + | chr1_1:75845134-75845153 | Msa0044310:intron | 30.0% | |
| TACCAAGCCTAATAATTCTT+GGG | + | chr1_1:75845135-75845154 | Msa0044310:intron | 30.0% | |
| ! | ATACACTAAATCAAGTGTTG+AGG | + | chr1_1:75845176-75845195 | Msa0044310:intron | 30.0% |
| TCAATTACATCAAGATGGAT+AGG | - | chr1_1:75845217-75845236 | None:intergenic | 30.0% | |
| ATCCATCTTGATGTAATTGA+CGG | + | chr1_1:75845217-75845236 | Msa0044310:intron | 30.0% | |
| TAATTGACGGCTGTTATAAA+TGG | + | chr1_1:75845230-75845249 | Msa0044310:intron | 30.0% | |
| TAGAACCGTAACGTAAATTT+AGG | - | chr1_1:75845332-75845351 | None:intergenic | 30.0% | |
| ATATGCAAAGTAAGCAGTTT+AGG | + | chr1_1:75845357-75845376 | Msa0044310:intron | 30.0% | |
| GTCTGTAATAACTTGACTTA+TGG | - | chr1_1:75845588-75845607 | None:intergenic | 30.0% | |
| !!! | TTTGTTTTTGTTTTGGATGC+AGG | - | chr1_1:75845784-75845803 | None:intergenic | 30.0% |
| TTCCAATGTTTGATATGAGT+AGG | + | chr1_1:75846145-75846164 | Msa0044310:intron | 30.0% | |
| TCATTGGATGAAAACAGTAA+TGG | + | chr1_1:75846344-75846363 | Msa0044310:intron | 30.0% | |
| !! | AGTTAACTTGGTTTTCCTTT+GGG | - | chr1_1:75846391-75846410 | None:intergenic | 30.0% |
| ACAAAAAATAAAGAGAGGAC+TGG | - | chr1_1:75846517-75846536 | None:intergenic | 30.0% | |
| !!! | AGTCCTCTCTTTATTTTTTG+TGG | + | chr1_1:75846516-75846535 | Msa0044310:intron | 30.0% |
| AAGATATTTGTCAGAATCTG+TGG | - | chr1_1:75846604-75846623 | None:intergenic | 30.0% | |
| TTCTTCTTATTACTACAGGA+AGG | + | chr1_1:75846658-75846677 | Msa0044310:intron | 30.0% | |
| GTAAACTCAGTATGTTTAGT+TGG | - | chr1_1:75846775-75846794 | None:intergenic | 30.0% | |
| TATTTAGGTGAATTTGAAGG+TGG | + | chr1_1:75846887-75846906 | Msa0044310:intron | 30.0% | |
| GTGGAAAAATATTAGCTACA+AGG | + | chr1_1:75846906-75846925 | Msa0044310:intron | 30.0% | |
| TTCAATGTTTCTTCTTGTAG+AGG | + | chr1_1:75846954-75846973 | Msa0044310:intron | 30.0% | |
| TCAATGTTTCTTCTTGTAGA+GGG | + | chr1_1:75846955-75846974 | Msa0044310:intron | 30.0% | |
| CTAAAACTGTAAACTGCAAA+GGG | - | chr1_1:75847226-75847245 | None:intergenic | 30.0% | |
| TAAATTTCAAGATCAGCATG+AGG | - | chr1_1:75847258-75847277 | None:intergenic | 30.0% | |
| ACAATTACATCAGTTTGCAA+AGG | - | chr1_1:75847333-75847352 | None:intergenic | 30.0% | |
| TTGCAAACTGATGTAATTGT+TGG | + | chr1_1:75847333-75847352 | Msa0044310:CDS | 30.0% | |
| ! | TATTTTCGGTTTAGCCAATA+TGG | + | chr1_1:75847434-75847453 | Msa0044310:intron | 30.0% |
| GTTTAGCCAATATGGTTAAT+TGG | + | chr1_1:75847442-75847461 | Msa0044310:intron | 30.0% | |
| AGCAAACCAATTAACCATAT+TGG | - | chr1_1:75847451-75847470 | None:intergenic | 30.0% | |
| !! | AGTTCTATTACTTTGGAACA+TGG | - | chr1_1:75847528-75847547 | None:intergenic | 30.0% |
| TAAATCTCAGAAATGCAGAA+AGG | - | chr1_1:75847746-75847765 | None:intergenic | 30.0% | |
| TGTACTACTTACGTTTCATA+GGG | + | chr1_1:75847814-75847833 | Msa0044310:intron | 30.0% | |
| !! | ATTTATGTTTTGGGTCAATG+TGG | + | chr1_1:75847886-75847905 | Msa0044310:intron | 30.0% |
| GCAAGTGTTCAATTGTAAAA+TGG | - | chr1_1:75848044-75848063 | None:intergenic | 30.0% | |
| TTTACAATTGAACACTTGCT+TGG | + | chr1_1:75848045-75848064 | Msa0044310:intron | 30.0% | |
| TCTCTAACCTATTAGATAGA+GGG | - | chr1_1:75848112-75848131 | None:intergenic | 30.0% | |
| TTAGTTGGTTAATGAGTTGT+GGG | - | chr1_1:75848158-75848177 | None:intergenic | 30.0% | |
| TAACAGCTTACATAGAAACA+TGG | + | chr1_1:75848232-75848251 | Msa0044310:intron | 30.0% | |
| AACAGCTTACATAGAAACAT+GGG | + | chr1_1:75848233-75848252 | Msa0044310:intron | 30.0% | |
| ATAAAGAACAAAGCAATGAC+AGG | - | chr1_1:75848296-75848315 | None:intergenic | 30.0% | |
| TTTGTTCTTTATTCCTCTAC+TGG | + | chr1_1:75848304-75848323 | Msa0044310:intron | 30.0% | |
| ! | GATTTCTATCTCGCAATTTT+TGG | + | chr1_1:75848350-75848369 | Msa0044310:intron | 30.0% |
| !!! | CTTTGTTTTCTTCTTTTAGG+CGG | + | chr1_1:75848494-75848513 | Msa0044310:intron | 30.0% |
| TGAGCATCTAAATATAATGG+AGG | + | chr1_1:75848742-75848761 | Msa0044310:intron | 30.0% | |
| !! | TTTAAGACAACACAAGCTTT+TGG | - | chr1_1:75848933-75848952 | None:intergenic | 30.0% |
| !! | TACTTTTGAAAGATGAGAAC+GGG | - | chr1_1:75848958-75848977 | None:intergenic | 30.0% |
| TTGGATGAACAATTATTGTC+AGG | - | chr1_1:75848987-75849006 | None:intergenic | 30.0% | |
| GCATTATTTGTGTTTAGACT+TGG | + | chr1_1:75849048-75849067 | Msa0044310:intron | 30.0% | |
| AAGACCAACCAAACATAAAA+CGG | - | chr1_1:75849085-75849104 | None:intergenic | 30.0% | |
| !! | AAAAGGTATTCATCTCAAGT+CGG | + | chr1_1:75849297-75849316 | Msa0044310:intron | 30.0% |
| CTCATGCTTATAATATGACA+AGG | - | chr1_1:75849379-75849398 | None:intergenic | 30.0% | |
| CAACAGGATTTACAAATACA+TGG | - | chr1_1:75849430-75849449 | None:intergenic | 30.0% | |
| TATGCAAAATCAATCTTCAC+GGG | - | chr1_1:75849607-75849626 | None:intergenic | 30.0% | |
| GTATGCAAAATCAATCTTCA+CGG | - | chr1_1:75849608-75849627 | None:intergenic | 30.0% | |
| TATGCAAAAACAATCTTCAC+TGG | - | chr1_1:75849660-75849679 | None:intergenic | 30.0% | |
| ! | TCTTTCAATGTTTTATCTGC+AGG | - | chr1_1:75849735-75849754 | None:intergenic | 30.0% |
| !!! | CGTTCTTTTGGTTTTGATTT+AGG | + | chr1_1:75849793-75849812 | Msa0044310:intron | 30.0% |
| AATCAACTCACAACTTCAAT+TGG | - | chr1_1:75849833-75849852 | None:intergenic | 30.0% | |
| ATACTTAACCCATCCATAAT+AGG | - | chr1_1:75849881-75849900 | None:intergenic | 30.0% | |
| !!! | TAATAGTTTTGTAATGCTGC+AGG | + | chr1_1:75849900-75849919 | Msa0044310:intron | 30.0% |
| ! | TCATTGCATTTTATGCTAGA+AGG | + | chr1_1:75850063-75850082 | Msa0044310:intron | 30.0% |
| ! | CATTGCATTTTATGCTAGAA+GGG | + | chr1_1:75850064-75850083 | Msa0044310:intron | 30.0% |
| TGGCATAAGTAGAAAAGATA+AGG | - | chr1_1:75850161-75850180 | None:intergenic | 30.0% | |
| TCCTTTCCATTAAAACTTTC+AGG | - | chr1_1:75850224-75850243 | None:intergenic | 30.0% | |
| ! | TTTTAATGGAAAGGAAACAG+AGG | + | chr1_1:75850229-75850248 | Msa0044310:intron | 30.0% |
| ! | CTTTTCTAACACACTATCAT+TGG | - | chr1_1:75850371-75850390 | None:intergenic | 30.0% |
| TAGTACAAATGTAATAGCTG+TGG | - | chr1_1:75850589-75850608 | None:intergenic | 30.0% | |
| AGTATATGTGTTGCATACAT+CGG | + | chr1_1:75850665-75850684 | Msa0044310:intron | 30.0% | |
| ! | AGTTGATATGTTGCATGATA+AGG | - | chr1_1:75850874-75850893 | None:intergenic | 30.0% |
| TGCCATAATATTCTTGTACT+TGG | - | chr1_1:75850927-75850946 | None:intergenic | 30.0% | |
| !! | ACTCGTAAGTGTTATTTACT+TGG | + | chr1_1:75851192-75851211 | Msa0044310:intron | 30.0% |
| !!! | GTTTTTAGCTAAGGAATTGA+AGG | - | chr1_1:75851531-75851550 | None:intergenic | 30.0% |
| ! | CAACTTTTCAAATTGATCAG+GGG | - | chr1_1:75851570-75851589 | None:intergenic | 30.0% |
| TCACGTATAAAATATGCCTT+GGG | + | chr1_1:75851655-75851674 | Msa0044310:intron | 30.0% | |
| TCAATTCTGTAAACATGGTA+TGG | + | chr1_1:75851768-75851787 | Msa0044310:intron | 30.0% | |
| CTGAAGATCATAAATTACTC+AGG | - | chr1_1:75851938-75851957 | None:intergenic | 30.0% | |
| !! | TGTAAACTTTTTAGTCACTG+TGG | + | chr1_1:75851975-75851994 | Msa0044310:intron | 30.0% |
| TTCTATACACAACTGTGTAT+GGG | + | chr1_1:75852046-75852065 | Msa0044310:CDS | 30.0% | |
| !! | TTTTTGATTGTTGTTGGTTG+CGG | + | chr1_1:75852223-75852242 | Msa0044310:intron | 30.0% |
| !! | ACATGCTCTAAAATATGAAC+AGG | - | chr1_1:75852327-75852346 | None:intergenic | 30.0% |
| ! | AAAATAGTGCATTGATGCAA+AGG | - | chr1_1:75852469-75852488 | None:intergenic | 30.0% |
| GTATAACCCCAATAAAATGT+CGG | - | chr1_1:75852776-75852795 | None:intergenic | 30.0% | |
| ! | ACATTTTATTGGGGTTATAC+TGG | + | chr1_1:75852776-75852795 | Msa0044310:intron | 30.0% |
| ! | CATTTTATTGGGGTTATACT+GGG | + | chr1_1:75852777-75852796 | Msa0044310:intron | 30.0% |
| ! | ATTTTATTGGGGTTATACTG+GGG | + | chr1_1:75852778-75852797 | Msa0044310:intron | 30.0% |
| AAAACAGAAGAACTGGAATA+AGG | - | chr1_1:75852842-75852861 | None:intergenic | 30.0% | |
| TATTCATGATCTTGACTCAA+AGG | + | chr1_1:75853173-75853192 | Msa0044310:CDS | 30.0% | |
| TATCGTAACATATGGAACAT+CGG | - | chr1_1:75853248-75853267 | None:intergenic | 30.0% | |
| TTAACATGTTCACTAGAAAG+AGG | - | chr1_1:75853507-75853526 | None:intergenic | 30.0% | |
| ! | AATATTTTCCGCACAATATC+CGG | - | chr1_1:75853597-75853616 | None:intergenic | 30.0% |
| GATATTGTGCGGAAAATATT+CGG | + | chr1_1:75853597-75853616 | Msa0044310:CDS | 30.0% | |
| AACATAGAAATTACCAGATG+AGG | - | chr1_1:75853645-75853664 | None:intergenic | 30.0% | |
| ! | GATTTTGCATCTTCAGATAA+TGG | - | chr1_1:75853706-75853725 | None:intergenic | 30.0% |
| !!! | ATCGATTTTTTCTTCAGAAC+TGG | + | chr1_1:75853815-75853834 | Msa0044310:intron | 30.0% |
| ACTTCAAATTAATCCAAACC+CGG | - | chr1_1:75853864-75853883 | None:intergenic | 30.0% | |
| ! | TTTCCCTTTTAATCAGTTCA+TGG | + | chr1_1:75853895-75853914 | Msa0044310:intron | 30.0% |
| GAACCATGAACTGATTAAAA+GGG | - | chr1_1:75853901-75853920 | None:intergenic | 30.0% | |
| AGAACCATGAACTGATTAAA+AGG | - | chr1_1:75853902-75853921 | None:intergenic | 30.0% | |
| ! | TCATTTAACTTCTTCGAAAG+TGG | - | chr1_1:75854155-75854174 | None:intergenic | 30.0% |
| TTCGAAGAAGTTAAATGATG+TGG | + | chr1_1:75854157-75854176 | Msa0044310:intron | 30.0% | |
| ACATTATTCCCCAATCTTAT+CGG | + | chr1_1:75854444-75854463 | Msa0044310:intron | 30.0% | |
| ! | TTTCTGAAAAGGATTCTACT+TGG | + | chr1_1:75854580-75854599 | Msa0044310:intron | 30.0% |
| TAACCATATTGTTCTTGAAC+TGG | - | chr1_1:75854759-75854778 | None:intergenic | 30.0% | |
| AATGTCATTCTTCTCGTATA+TGG | + | chr1_1:75854979-75854998 | Msa0044310:CDS | 30.0% | |
| TAGGCAAATCCAGAATAAAA+TGG | + | chr1_1:75855057-75855076 | Msa0044310:CDS | 30.0% | |
| !!! | ATTACGATGCCATTTTATTC+TGG | - | chr1_1:75855069-75855088 | None:intergenic | 30.0% |
| !! | TGAGCAATTGTGTTTTTATG+CGG | + | chr1_1:75855326-75855345 | Msa0044310:three_prime_UTR | 30.0% |
| TACCCAAGAATTATTAGGCT+TGG | - | chr1_1:75845140-75845159 | None:intergenic | 35.0% | |
| GATGGCCTAAATTTACGTTA+CGG | + | chr1_1:75845324-75845343 | Msa0044310:intron | 35.0% | |
| ! | AAGCAGTTTAGGCTTTTGTA+TGG | + | chr1_1:75845368-75845387 | Msa0044310:intron | 35.0% |
| CATTCATCATTGGACACTTA+AGG | - | chr1_1:75845449-75845468 | None:intergenic | 35.0% | |
| CTTAAGTGTCCAATGATGAA+TGG | + | chr1_1:75845447-75845466 | Msa0044310:intron | 35.0% | |
| AATTGGACACCATTCATCAT+TGG | - | chr1_1:75845459-75845478 | None:intergenic | 35.0% | |
| ! | TCCAATTCACTGTTTTGTGT+AGG | + | chr1_1:75845472-75845491 | Msa0044310:intron | 35.0% |
| ACCTACACAAAACAGTGAAT+TGG | - | chr1_1:75845476-75845495 | None:intergenic | 35.0% | |
| ! | ATTAGAAAGAAGTACACAGC+AGG | - | chr1_1:75845512-75845531 | None:intergenic | 35.0% |
| TCAATGAATGCTGTTCAAAC+TGG | + | chr1_1:75845539-75845558 | Msa0044310:CDS | 35.0% | |
| ! | ATTGTCTTGTGCGAGATTTT+CGG | + | chr1_1:75845923-75845942 | Msa0044310:intron | 35.0% |
| ! | TAAACTCCAAAGAGCACAAT+TGG | + | chr1_1:75846064-75846083 | Msa0044310:intron | 35.0% |
| GTCCTACTCATATCAAACAT+TGG | - | chr1_1:75846150-75846169 | None:intergenic | 35.0% | |
| ATATGAGTAGGACATGAGAA+CGG | + | chr1_1:75846157-75846176 | Msa0044310:intron | 35.0% | |
| CGGCGTGATTCAATATTTAT+AGG | + | chr1_1:75846177-75846196 | Msa0044310:intron | 35.0% | |
| !! | GTTAACTTGGTTTTCCTTTG+GGG | - | chr1_1:75846390-75846409 | None:intergenic | 35.0% |
| !! | CAGTTAACTTGGTTTTCCTT+TGG | - | chr1_1:75846392-75846411 | None:intergenic | 35.0% |
| TTGACATTGAGTTCATGACT+TGG | + | chr1_1:75846631-75846650 | Msa0044310:intron | 35.0% | |
| AACATTGAAACTAATGCCTG+CGG | - | chr1_1:75846943-75846962 | None:intergenic | 35.0% | |
| GTAGAGGGTGAATGAAATTT+AGG | + | chr1_1:75846970-75846989 | Msa0044310:intron | 35.0% | |
| TCAAACAATGGCAATATGAC+CGG | - | chr1_1:75847036-75847055 | None:intergenic | 35.0% | |
| GGAAAAACAGACTCAAACAA+TGG | - | chr1_1:75847048-75847067 | None:intergenic | 35.0% | |
| CCTAAAACTGTAAACTGCAA+AGG | - | chr1_1:75847227-75847246 | None:intergenic | 35.0% | |
| ! | CCTTTGCAGTTTACAGTTTT+AGG | + | chr1_1:75847224-75847243 | Msa0044310:intron | 35.0% |
| GTATAAACATCTTGGACATC+AGG | - | chr1_1:75847309-75847328 | None:intergenic | 35.0% | |
| ! | GCAAAGGAGTATAAACATCT+TGG | - | chr1_1:75847317-75847336 | None:intergenic | 35.0% |
| ! | AATATTTTCGTGCTTGCAGA+AGG | + | chr1_1:75847376-75847395 | Msa0044310:intron | 35.0% |
| !! | CTATTACTTTGGAACATGGT+AGG | - | chr1_1:75847524-75847543 | None:intergenic | 35.0% |
| !! | TTTTATGCTGTTTGCTGAGA+TGG | + | chr1_1:75847628-75847647 | Msa0044310:intron | 35.0% |
| GTGTACTACTTACGTTTCAT+AGG | + | chr1_1:75847813-75847832 | Msa0044310:intron | 35.0% | |
| GAACCTACATTAGAAACAGA+GGG | + | chr1_1:75847924-75847943 | Msa0044310:intron | 35.0% | |
| !! | TTTCCCTCTGTTTCTAATGT+AGG | - | chr1_1:75847930-75847949 | None:intergenic | 35.0% |
| TGTAAAATGGGAAACCTTTC+CGG | - | chr1_1:75848031-75848050 | None:intergenic | 35.0% | |
| AAGTATGTAGGGAGATCATT+TGG | - | chr1_1:75848089-75848108 | None:intergenic | 35.0% | |
| ! | TAGATAGAGGGAAGTATGTA+GGG | - | chr1_1:75848100-75848119 | None:intergenic | 35.0% |
| ! | TTAGATAGAGGGAAGTATGT+AGG | - | chr1_1:75848101-75848120 | None:intergenic | 35.0% |
| CATACTTCCCTCTATCTAAT+AGG | + | chr1_1:75848102-75848121 | Msa0044310:intron | 35.0% | |
| CTCTCTAACCTATTAGATAG+AGG | - | chr1_1:75848113-75848132 | None:intergenic | 35.0% | |
| GTTAGTTGGTTAATGAGTTG+TGG | - | chr1_1:75848159-75848178 | None:intergenic | 35.0% | |
| TTCTATGTAAGCTGTTACAG+TGG | - | chr1_1:75848229-75848248 | None:intergenic | 35.0% | |
| ! | TCAATATTGTTGCTGGTTAG+AGG | - | chr1_1:75848465-75848484 | None:intergenic | 35.0% |
| ATCAGCATCAATATTGTTGC+TGG | - | chr1_1:75848472-75848491 | None:intergenic | 35.0% | |
| CGCCTAAAAGAAGAAAACAA+AGG | - | chr1_1:75848496-75848515 | None:intergenic | 35.0% | |
| TGCACTATAGTATGAATGTG+TGG | - | chr1_1:75848786-75848805 | None:intergenic | 35.0% | |
| ! | ATCACCGTTTTATGTTTGGT+TGG | + | chr1_1:75849078-75849097 | Msa0044310:intron | 35.0% |
| AGAGATGTTTGTTCTACCTT+CGG | - | chr1_1:75849270-75849289 | None:intergenic | 35.0% | |
| ATAAGCATGAGCTTGTAAGA+TGG | + | chr1_1:75849388-75849407 | Msa0044310:intron | 35.0% | |
| ATTCTACAGCCAATTACAAC+AGG | - | chr1_1:75849446-75849465 | None:intergenic | 35.0% | |
| CAATCTTCACTGGACTATTT+AGG | - | chr1_1:75849650-75849669 | None:intergenic | 35.0% | |
| ATGAACAGCCTATTATGGAT+GGG | + | chr1_1:75849870-75849889 | Msa0044310:intron | 35.0% | |
| ! | GCATTTTCAGAAAGACTGAT+TGG | - | chr1_1:75850181-75850200 | None:intergenic | 35.0% |
| ! | ATCAGTCTTTCTGAAAATGC+TGG | + | chr1_1:75850181-75850200 | Msa0044310:intron | 35.0% |
| ! | TCAGTCTTTCTGAAAATGCT+GGG | + | chr1_1:75850182-75850201 | Msa0044310:intron | 35.0% |
| !! | CACATGCCTGAAAGTTTTAA+TGG | + | chr1_1:75850215-75850234 | Msa0044310:intron | 35.0% |
| !! | GCCTGAAAGTTTTAATGGAA+AGG | + | chr1_1:75850220-75850239 | Msa0044310:intron | 35.0% |
| CAGACCTATATGAATTTCAC+TGG | - | chr1_1:75850288-75850307 | None:intergenic | 35.0% | |
| CAGTGAAATTCATATAGGTC+TGG | + | chr1_1:75850286-75850305 | Msa0044310:intron | 35.0% | |
| TGAAATTCATATAGGTCTGG+TGG | + | chr1_1:75850289-75850308 | Msa0044310:intron | 35.0% | |
| GAAATTCATATAGGTCTGGT+GGG | + | chr1_1:75850290-75850309 | Msa0044310:intron | 35.0% | |
| TATCATAAACTCGCAAAGAC+TGG | + | chr1_1:75850411-75850430 | Msa0044310:intron | 35.0% | |
| ! | TTCGTTCTGGTATCAACTTT+TGG | - | chr1_1:75850500-75850519 | None:intergenic | 35.0% |
| AGCTTTACAACGATCTTAGA+TGG | + | chr1_1:75850765-75850784 | Msa0044310:CDS | 35.0% | |
| ATCTTAGATGGAATGTCACT+AGG | + | chr1_1:75850777-75850796 | Msa0044310:CDS | 35.0% | |
| TAGAAAATAATACTGACCCC+AGG | - | chr1_1:75850985-75851004 | None:intergenic | 35.0% | |
| ATGTTTCGTGCAGTTACTTA+GGG | - | chr1_1:75851345-75851364 | None:intergenic | 35.0% | |
| AATGTTTCGTGCAGTTACTT+AGG | - | chr1_1:75851346-75851365 | None:intergenic | 35.0% | |
| TTAGGAATAGCGATGAATCT+GGG | - | chr1_1:75851370-75851389 | None:intergenic | 35.0% | |
| ATTAGGAATAGCGATGAATC+TGG | - | chr1_1:75851371-75851390 | None:intergenic | 35.0% | |
| GGGAGATAGGTGTAATTATT+AGG | - | chr1_1:75851388-75851407 | None:intergenic | 35.0% | |
| CAAGTTATAGCAGAGAAGAT+GGG | - | chr1_1:75851408-75851427 | None:intergenic | 35.0% | |
| TGCAAGGTTGTACAAAATTG+AGG | + | chr1_1:75851426-75851445 | Msa0044310:intron | 35.0% | |
| GCAAGGTTGTACAAAATTGA+GGG | + | chr1_1:75851427-75851446 | Msa0044310:intron | 35.0% | |
| TTTCAAATTGATCAGGGGTT+GGG | - | chr1_1:75851565-75851584 | None:intergenic | 35.0% | |
| ! | TTTTCAAATTGATCAGGGGT+TGG | - | chr1_1:75851566-75851585 | None:intergenic | 35.0% |
| GTCACGTATAAAATATGCCT+TGG | + | chr1_1:75851654-75851673 | Msa0044310:intron | 35.0% | |
| CTTGGGTATTAGTTGCTAAT+GGG | + | chr1_1:75851672-75851691 | Msa0044310:intron | 35.0% | |
| TCGTGTCAATTCTGTAAACA+TGG | + | chr1_1:75851763-75851782 | Msa0044310:intron | 35.0% | |
| AAAGGTAAAAATTAGCCCAG+AGG | - | chr1_1:75851803-75851822 | None:intergenic | 35.0% | |
| TGACTGTGACAAAACTTTCA+TGG | + | chr1_1:75851831-75851850 | Msa0044310:CDS | 35.0% | |
| CTTCTATACACAACTGTGTA+TGG | + | chr1_1:75852045-75852064 | Msa0044310:CDS | 35.0% | |
| TTACTAAGCATACTCGTAAC+AGG | - | chr1_1:75852105-75852124 | None:intergenic | 35.0% | |
| !!! | TTTTGCTGTTTCTTGAAGCA+AGG | + | chr1_1:75852156-75852175 | Msa0044310:CDS | 35.0% |
| CTCATTAGCAGCTACAAAAA+AGG | - | chr1_1:75852402-75852421 | None:intergenic | 35.0% | |
| AGACAGTATGTTTGAATGCA+AGG | - | chr1_1:75852654-75852673 | None:intergenic | 35.0% | |
| TTGCTTCAAAACAGAAGAAC+TGG | - | chr1_1:75852849-75852868 | None:intergenic | 35.0% | |
| !!! | CTTGTTTTAGCTGTGATTTG+AGG | + | chr1_1:75852872-75852891 | Msa0044310:intron | 35.0% |
| ATTCAGCATGTTTCAATGTG+TGG | + | chr1_1:75852958-75852977 | Msa0044310:intron | 35.0% | |
| TTCAGCATGTTTCAATGTGT+GGG | + | chr1_1:75852959-75852978 | Msa0044310:intron | 35.0% | |
| AATTAGAACCCACTTGTAAC+TGG | - | chr1_1:75853007-75853026 | None:intergenic | 35.0% | |
| AGTGAACATGTTAACGATGA+TGG | + | chr1_1:75853513-75853532 | Msa0044310:CDS | 35.0% | |
| GGAATCTATCTTCTTGAGAA+TGG | + | chr1_1:75853534-75853553 | Msa0044310:CDS | 35.0% | |
| !! | AGTTGATGAAATTCCTCATC+TGG | + | chr1_1:75853629-75853648 | Msa0044310:CDS | 35.0% |
| ! | TCAAACTTCACTATTTGCTG+TGG | + | chr1_1:75853728-75853747 | Msa0044310:intron | 35.0% |
| !!! | ATTTGCTGTGGTTGTTTTCA+AGG | + | chr1_1:75853740-75853759 | Msa0044310:intron | 35.0% |
| !! | TTTGCTGTGGTTGTTTTCAA+GGG | + | chr1_1:75853741-75853760 | Msa0044310:intron | 35.0% |
| GCAAAGTTGACAATTATGAC+CGG | + | chr1_1:75853842-75853861 | Msa0044310:intron | 35.0% | |
| CAAAGTTGACAATTATGACC+GGG | + | chr1_1:75853843-75853862 | Msa0044310:intron | 35.0% | |
| CATGTTGTTGCAATACAAAC+TGG | - | chr1_1:75854127-75854146 | None:intergenic | 35.0% | |
| ATGATGTGGTGAATGAGATT+CGG | + | chr1_1:75854171-75854190 | Msa0044310:CDS | 35.0% | |
| TGACATGGAAGATATTCAAC+AGG | - | chr1_1:75854255-75854274 | None:intergenic | 35.0% | |
| ACAACTTTGCCGATAAGATT+GGG | - | chr1_1:75854456-75854475 | None:intergenic | 35.0% | |
| !! | GTGCTCTATGTTTTCTGAAA+AGG | + | chr1_1:75854569-75854588 | Msa0044310:intron | 35.0% |
| CTACCAGTTCAAGAACAATA+TGG | + | chr1_1:75854753-75854772 | Msa0044310:intron | 35.0% | |
| ATGGACAAGAAACTCTACAT+AGG | - | chr1_1:75855032-75855051 | None:intergenic | 35.0% | |
| AGTTTCTTGTCCATGTTCAT+AGG | + | chr1_1:75855038-75855057 | Msa0044310:CDS | 35.0% | |
| AAAGCTTGCAAAAATGAAGC+TGG | - | chr1_1:75855103-75855122 | None:intergenic | 35.0% | |
| AGAATTTCTCACCCATCATT+GGG | - | chr1_1:75855157-75855176 | None:intergenic | 35.0% | |
| !! | AAATTGCTGTTGGTGATAGT+TGG | + | chr1_1:75855265-75855284 | Msa0044310:three_prime_UTR | 35.0% |
| ATCAAGATGGATAGGCTTGA+AGG | - | chr1_1:75845209-75845228 | None:intergenic | 40.0% | |
| AGCCGTCAATTACATCAAGA+TGG | - | chr1_1:75845222-75845241 | None:intergenic | 40.0% | |
| GAGAGGAGGAAGAATCTTAA+AGG | - | chr1_1:75845757-75845776 | None:intergenic | 40.0% | |
| AAATCAGATTCCCACCAAGT+TGG | + | chr1_1:75845846-75845865 | Msa0044310:intron | 40.0% | |
| TATAGTGTAAGGGACCAACT+TGG | - | chr1_1:75845863-75845882 | None:intergenic | 40.0% | |
| ! | TCACACAAGCTTAGCATTGA+TGG | - | chr1_1:75846011-75846030 | None:intergenic | 40.0% |
| ATATGGCCAATTGTGCTCTT+TGG | - | chr1_1:75846073-75846092 | None:intergenic | 40.0% | |
| ACTTTCTTGCCTGCATTCAA+TGG | + | chr1_1:75846114-75846133 | Msa0044310:intron | 40.0% | |
| ATCCTCAATCCATTGAATGC+AGG | - | chr1_1:75846126-75846145 | None:intergenic | 40.0% | |
| GCCAAACTCAGTGAAATAGT+GGG | + | chr1_1:75846278-75846297 | Msa0044310:intron | 40.0% | |
| CCAAACTCAGTGAAATAGTG+GGG | + | chr1_1:75846279-75846298 | Msa0044310:intron | 40.0% | |
| ! | AATAGTGGGGAGACTAGAAA+AGG | + | chr1_1:75846292-75846311 | Msa0044310:intron | 40.0% |
| ! | ATAGTGGGGAGACTAGAAAA+GGG | + | chr1_1:75846293-75846312 | Msa0044310:intron | 40.0% |
| !!! | TGGTTTTCCTTTGGGGTAAT+TGG | - | chr1_1:75846383-75846402 | None:intergenic | 40.0% |
| ! | ATAAAGAGAGGACTGGCAAA+TGG | - | chr1_1:75846510-75846529 | None:intergenic | 40.0% |
| CAACTCCCACCTTTGTATTA+GGG | - | chr1_1:75846684-75846703 | None:intergenic | 40.0% | |
| TGTAAACTGCAAAGGGCAAA+GGG | - | chr1_1:75847219-75847238 | None:intergenic | 40.0% | |
| TGTAATTGTTGGACTATCCG+AGG | + | chr1_1:75847344-75847363 | Msa0044310:CDS | 40.0% | |
| AATGTAGGTTCCTAGCAATG+AGG | - | chr1_1:75847915-75847934 | None:intergenic | 40.0% | |
| GGAACCTACATTAGAAACAG+AGG | + | chr1_1:75847923-75847942 | Msa0044310:intron | 40.0% | |
| ATAGTGGCAGATAAGGTAGA+GGG | - | chr1_1:75848187-75848206 | None:intergenic | 40.0% | |
| AATAGTGGCAGATAAGGTAG+AGG | - | chr1_1:75848188-75848207 | None:intergenic | 40.0% | |
| ACCTTATCTGCCACTATTTG+TGG | + | chr1_1:75848190-75848209 | Msa0044310:intron | 40.0% | |
| AGTTAGACTGCCACAAATAG+TGG | - | chr1_1:75848203-75848222 | None:intergenic | 40.0% | |
| AATGACAGGAGAAACAAGGA+CGG | - | chr1_1:75848282-75848301 | None:intergenic | 40.0% | |
| AAGCAATGACAGGAGAAACA+AGG | - | chr1_1:75848286-75848305 | None:intergenic | 40.0% | |
| ! | TTGTTGCTGGTTAGAGGAAT+GGG | - | chr1_1:75848459-75848478 | None:intergenic | 40.0% |
| ! | ATTGTTGCTGGTTAGAGGAA+TGG | - | chr1_1:75848460-75848479 | None:intergenic | 40.0% |
| TTCCTTGCAATGAAAGACAC+TGG | + | chr1_1:75848519-75848538 | Msa0044310:CDS | 40.0% | |
| TTGCAATGAAAGACACTGGA+GGG | + | chr1_1:75848523-75848542 | Msa0044310:CDS | 40.0% | |
| AATGGAGGTTGCTAGTATTC+AGG | + | chr1_1:75848757-75848776 | Msa0044310:intron | 40.0% | |
| ! | CTGGATCACCGTTTTATGTT+TGG | + | chr1_1:75849074-75849093 | Msa0044310:intron | 40.0% |
| TCTTCAGTCTTGCCATCTAT+TGG | + | chr1_1:75849218-75849237 | Msa0044310:intron | 40.0% | |
| GTAGAACAAACATCTCTGCA+GGG | + | chr1_1:75849273-75849292 | Msa0044310:CDS | 40.0% | |
| TAGAACAAACATCTCTGCAG+GGG | + | chr1_1:75849274-75849293 | Msa0044310:CDS | 40.0% | |
| AAGTCGGTTGTTTACATCGT+TGG | + | chr1_1:75849313-75849332 | Msa0044310:intron | 40.0% | |
| CAATCTTCACGGGACTATTT+AGG | - | chr1_1:75849597-75849616 | None:intergenic | 40.0% | |
| TCTTCACTGGACTATTTAGG+AGG | - | chr1_1:75849647-75849666 | None:intergenic | 40.0% | |
| !! | AGTTGAACTTGCTGAGTATC+AGG | + | chr1_1:75849761-75849780 | Msa0044310:CDS | 40.0% |
| ! | AGGTCTATCTTGCGTTCTTT+TGG | + | chr1_1:75849781-75849800 | Msa0044310:intron | 40.0% |
| GCTTGATGAACAGCCTATTA+TGG | + | chr1_1:75849865-75849884 | Msa0044310:intron | 40.0% | |
| GATGAACAGCCTATTATGGA+TGG | + | chr1_1:75849869-75849888 | Msa0044310:intron | 40.0% | |
| TGGGTCTCACCAATAAACAA+GGG | + | chr1_1:75850309-75850328 | Msa0044310:intron | 40.0% | |
| TCAGTCAGACCAAATCATCT+AGG | - | chr1_1:75850336-75850355 | None:intergenic | 40.0% | |
| TCTGAAGAACTAGGCAACAA+TGG | + | chr1_1:75850445-75850464 | Msa0044310:intron | 40.0% | |
| GATCAGAAAGAGCTGAGAAT+GGG | - | chr1_1:75850739-75850758 | None:intergenic | 40.0% | |
| AGATCGTTGTAAAGCTTTGC+AGG | - | chr1_1:75850761-75850780 | None:intergenic | 40.0% | |
| ATTACAGCCTCAAAACCTTG+TGG | - | chr1_1:75850803-75850822 | None:intergenic | 40.0% | |
| CAGGTAAGTCAACATCTGTT+GGG | - | chr1_1:75850966-75850985 | None:intergenic | 40.0% | |
| !! | CAACAGATGTTGACTTACCT+GGG | + | chr1_1:75850965-75850984 | Msa0044310:CDS | 40.0% |
| !! | AACAGATGTTGACTTACCTG+GGG | + | chr1_1:75850966-75850985 | Msa0044310:CDS | 40.0% |
| ! | AGCAGAGCATATTGATGGTT+GGG | + | chr1_1:75851078-75851097 | Msa0044310:intron | 40.0% |
| !!! | GGTGATTTTGACTTGAGGAT+TGG | + | chr1_1:75851099-75851118 | Msa0044310:intron | 40.0% |
| TGTGAGTGTAAGTGAACAAG+TGG | - | chr1_1:75851256-75851275 | None:intergenic | 40.0% | |
| TAGCAGTAGGCAAATTGCAA+TGG | - | chr1_1:75851287-75851306 | None:intergenic | 40.0% | |
| ! | TGCCTACTGCTATTGATAAC+TGG | + | chr1_1:75851295-75851314 | Msa0044310:intron | 40.0% |
| CTCCAGTTATCAATAGCAGT+AGG | - | chr1_1:75851300-75851319 | None:intergenic | 40.0% | |
| ! | CTGCTATTGATAACTGGAGT+CGG | + | chr1_1:75851301-75851320 | Msa0044310:intron | 40.0% |
| TAGGAATAGCGATGAATCTG+GGG | - | chr1_1:75851369-75851388 | None:intergenic | 40.0% | |
| GCAAGTTATAGCAGAGAAGA+TGG | - | chr1_1:75851409-75851428 | None:intergenic | 40.0% | |
| ! | CTTCTCTGCTATAACTTGCA+AGG | + | chr1_1:75851410-75851429 | Msa0044310:intron | 40.0% |
| CTAAGGAATTGAAGGAGTTG+AGG | - | chr1_1:75851523-75851542 | None:intergenic | 40.0% | |
| !!! | GCTCAACTGGTTTTTAGCTA+AGG | - | chr1_1:75851540-75851559 | None:intergenic | 40.0% |
| CCATTAGCAACTAATACCCA+AGG | - | chr1_1:75851674-75851693 | None:intergenic | 40.0% | |
| CCTTGGGTATTAGTTGCTAA+TGG | + | chr1_1:75851671-75851690 | Msa0044310:intron | 40.0% | |
| GTATTAGTTGCTAATGGGAC+TGG | + | chr1_1:75851677-75851696 | Msa0044310:intron | 40.0% | |
| GTATGGTATGTTCAACCTCT+GGG | + | chr1_1:75851785-75851804 | Msa0044310:intron | 40.0% | |
| GTCACAGTCAATCTGCAAAA+AGG | - | chr1_1:75851821-75851840 | None:intergenic | 40.0% | |
| GAAACATGACGATAAGTTGC+AGG | + | chr1_1:75851861-75851880 | Msa0044310:CDS | 40.0% | |
| ! | TGGATCAGAATGTGCTTTTC+AGG | + | chr1_1:75851885-75851904 | Msa0044310:CDS | 40.0% |
| GATGACTATACCATGGAAAC+AGG | - | chr1_1:75852305-75852324 | None:intergenic | 40.0% | |
| TGAACAGGATGACTATACCA+TGG | - | chr1_1:75852312-75852331 | None:intergenic | 40.0% | |
| TTGTCCGGATGATGAAGAAA+CGG | - | chr1_1:75852513-75852532 | None:intergenic | 40.0% | |
| ATCCGGACAACTTATTCTTC+CGG | + | chr1_1:75852523-75852542 | Msa0044310:CDS | 40.0% | |
| GTACAGAGGCAAAAGCTTTA+GGG | - | chr1_1:75852552-75852571 | None:intergenic | 40.0% | |
| TGTACAGAGGCAAAAGCTTT+AGG | - | chr1_1:75852553-75852572 | None:intergenic | 40.0% | |
| AACATACCAAGTGTGTACAG+AGG | - | chr1_1:75852566-75852585 | None:intergenic | 40.0% | |
| TCAGCATGTTTCAATGTGTG+GGG | + | chr1_1:75852960-75852979 | Msa0044310:intron | 40.0% | |
| TGTTCTTAACCCTGTACTCT+TGG | - | chr1_1:75853058-75853077 | None:intergenic | 40.0% | |
| AGTACAGGGTTAAGAACAGA+GGG | + | chr1_1:75853060-75853079 | Msa0044310:CDS | 40.0% | |
| ! | AGATCGATGAACGGTCATTT+TGG | + | chr1_1:75853085-75853104 | Msa0044310:CDS | 40.0% |
| TTCACTAGAAAGAGGTAGGA+AGG | - | chr1_1:75853499-75853518 | None:intergenic | 40.0% | |
| CATGTTCACTAGAAAGAGGT+AGG | - | chr1_1:75853503-75853522 | None:intergenic | 40.0% | |
| ! | TGCATCTTCAGATAATGGCA+AGG | - | chr1_1:75853701-75853720 | None:intergenic | 40.0% |
| TTGACAATTATGACCGGGTT+TGG | + | chr1_1:75853848-75853867 | Msa0044310:intron | 40.0% | |
| ! | TGTCAAAATTAGCTTACCGG+AGG | - | chr1_1:75854214-75854233 | None:intergenic | 40.0% |
| ! | ATTCTAATGCACTGACCTGA+TGG | - | chr1_1:75854347-75854366 | None:intergenic | 40.0% |
| GATTGGGGAATAATGTCATG+CGG | - | chr1_1:75854440-75854459 | None:intergenic | 40.0% | |
| CAACTTTGCCGATAAGATTG+GGG | - | chr1_1:75854455-75854474 | None:intergenic | 40.0% | |
| CACAACTTTGCCGATAAGAT+TGG | - | chr1_1:75854457-75854476 | None:intergenic | 40.0% | |
| CAATCTTATCGGCAAAGTTG+TGG | + | chr1_1:75854455-75854474 | Msa0044310:intron | 40.0% | |
| GATTCTACTTGGTACTTAGC+TGG | + | chr1_1:75854591-75854610 | Msa0044310:intron | 40.0% | |
| TACGAGAAGAATGACATTCC+TGG | - | chr1_1:75854977-75854996 | None:intergenic | 40.0% | |
| TCTGGATTTGCCTATGAACA+TGG | - | chr1_1:75855051-75855070 | None:intergenic | 40.0% | |
| ! | TGGGGTTTGCTCTATCATTT+AGG | - | chr1_1:75855130-75855149 | None:intergenic | 40.0% |
| CAGAATTTCTCACCCATCAT+TGG | - | chr1_1:75855158-75855177 | None:intergenic | 40.0% | |
| ACTCAAGCAAACGAAGAATG+TGG | - | chr1_1:75855190-75855209 | None:intergenic | 40.0% | |
| ! | AAGAAGTACACAGCAGGCAT+TGG | - | chr1_1:75845506-75845525 | None:intergenic | 45.0% |
| GACAGTTAGAACTCACAGGA+AGG | - | chr1_1:75845610-75845629 | None:intergenic | 45.0% | |
| TGTCGACAGTTAGAACTCAC+AGG | - | chr1_1:75845614-75845633 | None:intergenic | 45.0% | |
| ! | GTGCGAGATTTTCGGTCTTT+TGG | + | chr1_1:75845931-75845950 | Msa0044310:intron | 45.0% |
| !! | TGCCTGCATTCAATGGATTG+AGG | + | chr1_1:75846121-75846140 | Msa0044310:intron | 45.0% |
| GGCCAAACTCAGTGAAATAG+TGG | + | chr1_1:75846277-75846296 | Msa0044310:intron | 45.0% | |
| CCCCACTATTTCACTGAGTT+TGG | - | chr1_1:75846282-75846301 | None:intergenic | 45.0% | |
| !! | TTCCTTTGGGGTAATTGGTC+AGG | - | chr1_1:75846378-75846397 | None:intergenic | 45.0% |
| ACAGGAAGGCCCTAATACAA+AGG | + | chr1_1:75846672-75846691 | Msa0044310:intron | 45.0% | |
| GAAGGCCCTAATACAAAGGT+GGG | + | chr1_1:75846676-75846695 | Msa0044310:CDS | 45.0% | |
| GCAACTCCCACCTTTGTATT+AGG | - | chr1_1:75846685-75846704 | None:intergenic | 45.0% | |
| CTAATGCCTGCGGCAATATT+CGG | - | chr1_1:75846933-75846952 | None:intergenic | 45.0% | |
| AATATGACCGGTCAGTTTGC+TGG | - | chr1_1:75847024-75847043 | None:intergenic | 45.0% | |
| ! | TGTTTTCACTGCTGAGAGAC+AGG | - | chr1_1:75847069-75847088 | None:intergenic | 45.0% |
| TCTCTCAGCAGTGAAAACAG+CGG | + | chr1_1:75847070-75847089 | Msa0044310:intron | 45.0% | |
| CCTTTGCGACTTGTCAAACA+CGG | + | chr1_1:75847165-75847184 | Msa0044310:intron | 45.0% | |
| CTGTAAACTGCAAAGGGCAA+AGG | - | chr1_1:75847220-75847239 | None:intergenic | 45.0% | |
| TCAGGAACAATGAGCATCAG+TGG | - | chr1_1:75847291-75847310 | None:intergenic | 45.0% | |
| AGAACTTCTGAATCGGCCTT+TGG | + | chr1_1:75847542-75847561 | Msa0044310:CDS | 45.0% | |
| TACCTTGATTGCTGCACCAA+AGG | - | chr1_1:75847561-75847580 | None:intergenic | 45.0% | |
| AATGTGGATGCCTCATTGCT+AGG | + | chr1_1:75847902-75847921 | Msa0044310:intron | 45.0% | |
| ! | TTTCCCAAGATTTTCCCGTC+CGG | + | chr1_1:75848009-75848028 | Msa0044310:intron | 45.0% |
| TTTCCGGACGGGAAAATCTT+GGG | - | chr1_1:75848015-75848034 | None:intergenic | 45.0% | |
| AAATGGGAAACCTTTCCGGA+CGG | - | chr1_1:75848027-75848046 | None:intergenic | 45.0% | |
| GTTGGTTAATGAGTTGTGGG+AGG | - | chr1_1:75848155-75848174 | None:intergenic | 45.0% | |
| GCCACAAATAGTGGCAGATA+AGG | - | chr1_1:75848194-75848213 | None:intergenic | 45.0% | |
| GCTTACATAGAAACATGGGC+TGG | + | chr1_1:75848237-75848256 | Msa0044310:intron | 45.0% | |
| ACGGGTCCAAGAAATTAAGC+GGG | - | chr1_1:75848263-75848282 | None:intergenic | 45.0% | |
| GACGGGTCCAAGAAATTAAG+CGG | - | chr1_1:75848264-75848283 | None:intergenic | 45.0% | |
| ATGACAGGAGAAACAAGGAC+GGG | - | chr1_1:75848281-75848300 | None:intergenic | 45.0% | |
| TACTTACCGTCTTCTCACTG+AGG | + | chr1_1:75848383-75848402 | Msa0044310:intron | 45.0% | |
| TGTCAACCTCAGTGAGAAGA+CGG | - | chr1_1:75848392-75848411 | None:intergenic | 45.0% | |
| CTCCAGTGTCTTTCATTGCA+AGG | - | chr1_1:75848524-75848543 | None:intergenic | 45.0% | |
| CTTGCAATGAAAGACACTGG+AGG | + | chr1_1:75848522-75848541 | Msa0044310:CDS | 45.0% | |
| !!! | AAGCTGTTGGTTTTCCAGTC+AGG | + | chr1_1:75848546-75848565 | Msa0044310:CDS | 45.0% |
| TAGCTATCAGCATCCCAACT+GGG | + | chr1_1:75848623-75848642 | Msa0044310:intron | 45.0% | |
| CCATTCATGATGTCCCAGTT+GGG | - | chr1_1:75848639-75848658 | None:intergenic | 45.0% | |
| TCCATTCATGATGTCCCAGT+TGG | - | chr1_1:75848640-75848659 | None:intergenic | 45.0% | |
| ! | TTGTGTTTAGACTTGGTCGC+TGG | + | chr1_1:75849055-75849074 | Msa0044310:intron | 45.0% |
| GTCTTGCCATCTATTGGCAT+TGG | + | chr1_1:75849224-75849243 | Msa0044310:intron | 45.0% | |
| GGTAGAACAAACATCTCTGC+AGG | + | chr1_1:75849272-75849291 | Msa0044310:CDS | 45.0% | |
| AAACATCTCTGCAGGGGAAA+AGG | + | chr1_1:75849280-75849299 | Msa0044310:CDS | 45.0% | |
| GAGCTTGTAAGATGGTGACA+TGG | + | chr1_1:75849396-75849415 | Msa0044310:intron | 45.0% | |
| TCTTCACGGGACTATTTAGG+AGG | - | chr1_1:75849594-75849613 | None:intergenic | 45.0% | |
| AGTTCTTGGGATGGTCGATA+TGG | - | chr1_1:75849974-75849993 | None:intergenic | 45.0% | |
| GTGGGTCTCACCAATAAACA+AGG | + | chr1_1:75850308-75850327 | Msa0044310:intron | 45.0% | |
| GGGTCTCACCAATAAACAAG+GGG | + | chr1_1:75850310-75850329 | Msa0044310:intron | 45.0% | |
| ! | CATCTAGGCCCCTTGTTTAT+TGG | - | chr1_1:75850321-75850340 | None:intergenic | 45.0% |
| AACAAGGGGCCTAGATGATT+TGG | + | chr1_1:75850324-75850343 | Msa0044310:intron | 45.0% | |
| GGATCAGAAAGAGCTGAGAA+TGG | - | chr1_1:75850740-75850759 | None:intergenic | 45.0% | |
| CCAGGTAAGTCAACATCTGT+TGG | - | chr1_1:75850967-75850986 | None:intergenic | 45.0% | |
| !! | CCAACAGATGTTGACTTACC+TGG | + | chr1_1:75850964-75850983 | Msa0044310:CDS | 45.0% |
| GCATGAGCAGAGCATATTGA+TGG | + | chr1_1:75851073-75851092 | Msa0044310:intron | 45.0% | |
| ! | GAGCAGAGCATATTGATGGT+TGG | + | chr1_1:75851077-75851096 | Msa0044310:intron | 45.0% |
| !!! | GGTTGGGTGATTTTGACTTG+AGG | + | chr1_1:75851094-75851113 | Msa0044310:intron | 45.0% |
| AAGTGGAGAGAGAGATTAGC+TGG | - | chr1_1:75851239-75851258 | None:intergenic | 45.0% | |
| TTTCGTGCAGTTACTTAGGG+AGG | - | chr1_1:75851342-75851361 | None:intergenic | 45.0% | |
| TAGCAGAGAAGATGGGAGAT+AGG | - | chr1_1:75851401-75851420 | None:intergenic | 45.0% | |
| TGAAGGAGTTGAGGAGTTCA+AGG | - | chr1_1:75851514-75851533 | None:intergenic | 45.0% | |
| GGTATGGTATGTTCAACCTC+TGG | + | chr1_1:75851784-75851803 | Msa0044310:intron | 45.0% | |
| CATGACGATAAGTTGCAGGA+TGG | + | chr1_1:75851865-75851884 | Msa0044310:CDS | 45.0% | |
| !! | ACAAGAGGAAGTGGCTTTGA+AGG | - | chr1_1:75852428-75852447 | None:intergenic | 45.0% |
| CAAAGCCACTTCCTCTTGTT+CGG | + | chr1_1:75852429-75852448 | Msa0044310:CDS | 45.0% | |
| AAAGCCACTTCCTCTTGTTC+GGG | + | chr1_1:75852430-75852449 | Msa0044310:CDS | 45.0% | |
| GCTACCGTTTCTTCATCATC+CGG | + | chr1_1:75852506-75852525 | Msa0044310:CDS | 45.0% | |
| CTCCGGAAGAATAAGTTGTC+CGG | - | chr1_1:75852528-75852547 | None:intergenic | 45.0% | |
| ! | CTTTTGCCTCTGTACACACT+TGG | + | chr1_1:75852557-75852576 | Msa0044310:CDS | 45.0% |
| CAGCATGTTTCAATGTGTGG+GGG | + | chr1_1:75852961-75852980 | Msa0044310:intron | 45.0% | |
| GGGCAATGTTCTTCTTCAGA+AGG | + | chr1_1:75852981-75853000 | Msa0044310:intron | 45.0% | |
| TTCAGAAGGCCAGTTACAAG+TGG | + | chr1_1:75852995-75853014 | Msa0044310:intron | 45.0% | |
| TCAGAAGGCCAGTTACAAGT+GGG | + | chr1_1:75852996-75853015 | Msa0044310:intron | 45.0% | |
| GAGTACAGGGTTAAGAACAG+AGG | + | chr1_1:75853059-75853078 | Msa0044310:CDS | 45.0% | |
| CAGAGGGAAAGATCGATGAA+CGG | + | chr1_1:75853076-75853095 | Msa0044310:CDS | 45.0% | |
| AACTTCTCTCTCTGCTCCAT+TGG | + | chr1_1:75853119-75853138 | Msa0044310:CDS | 45.0% | |
| TACACAAGCGGTATTGCCAA+TGG | - | chr1_1:75853138-75853157 | None:intergenic | 45.0% | |
| CAATACCGCTTGTGTATCCT+AGG | + | chr1_1:75853142-75853161 | Msa0044310:CDS | 45.0% | |
| ACCATCCTAGGATACACAAG+CGG | - | chr1_1:75853150-75853169 | None:intergenic | 45.0% | |
| TCATGAATAGCCACCATCCT+AGG | - | chr1_1:75853162-75853181 | None:intergenic | 45.0% | |
| CTAGAAAGAGGTAGGAAGGA+CGG | - | chr1_1:75853495-75853514 | None:intergenic | 45.0% | |
| ! | AGATAATGGCAAGGCAACAG+GGG | - | chr1_1:75853692-75853711 | None:intergenic | 45.0% |
| ! | CAGATAATGGCAAGGCAACA+GGG | - | chr1_1:75853693-75853712 | None:intergenic | 45.0% |
| ! | TCAGATAATGGCAAGGCAAC+AGG | - | chr1_1:75853694-75853713 | None:intergenic | 45.0% |
| ATGTGGTGAATGAGATTCGG+CGG | + | chr1_1:75854174-75854193 | Msa0044310:CDS | 45.0% | |
| ! | GGCAAAGATTTTGCTACCTC+CGG | + | chr1_1:75854195-75854214 | Msa0044310:CDS | 45.0% |
| AGGTTTAAGCTCTGCAGGAA+AGG | + | chr1_1:75854317-75854336 | Msa0044310:intron | 45.0% | |
| CTTAGCTGGTGTTTGACATG+CGG | + | chr1_1:75854605-75854624 | Msa0044310:intron | 45.0% | |
| AGAATGACATTCCTGGTGGA+TGG | - | chr1_1:75854970-75854989 | None:intergenic | 45.0% | |
| GAGAAGAATGACATTCCTGG+TGG | - | chr1_1:75854974-75854993 | None:intergenic | 45.0% | |
| AAACCCCAAGTACCCAATGA+TGG | + | chr1_1:75855142-75855161 | Msa0044310:three_prime_UTR | 45.0% | |
| AACCCCAAGTACCCAATGAT+GGG | + | chr1_1:75855143-75855162 | Msa0044310:three_prime_UTR | 45.0% | |
| TCACCCATCATTGGGTACTT+GGG | - | chr1_1:75855149-75855168 | None:intergenic | 45.0% | |
| !! | ACAAAAAAAAAAAAAAAAAT+TGG | - | chr1_1:75846797-75846816 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTGTTA+TGG | + | chr1_1:75846799-75846818 | Msa0044310:intron | 5.0% |
| GAGAAGCCTGAGCTATGTAG+AGG | + | chr1_1:75845018-75845037 | Msa0044310:CDS | 50.0% | |
| GCCTGAGCTATGTAGAGGAA+CGG | + | chr1_1:75845023-75845042 | Msa0044310:CDS | 50.0% | |
| ACCGTTCCTCTACATAGCTC+AGG | - | chr1_1:75845027-75845046 | None:intergenic | 50.0% | |
| ACTTATGGCACTGCAAGCTG+CGG | - | chr1_1:75845573-75845592 | None:intergenic | 50.0% | |
| ! | TTTTGGATGCAGGAGCAGAG+AGG | - | chr1_1:75845774-75845793 | None:intergenic | 50.0% |
| GTGTAAGGGACCAACTTGGT+GGG | - | chr1_1:75845859-75845878 | None:intergenic | 50.0% | |
| AGTGTAAGGGACCAACTTGG+TGG | - | chr1_1:75845860-75845879 | None:intergenic | 50.0% | |
| AGCCTGACCAATTACCCCAA+AGG | + | chr1_1:75846373-75846392 | Msa0044310:intron | 50.0% | |
| GGAAGGCCCTAATACAAAGG+TGG | + | chr1_1:75846675-75846694 | Msa0044310:intron | 50.0% | |
| CTTGAAACGTGCATTGCAGC+AGG | + | chr1_1:75846735-75846754 | Msa0044310:CDS | 50.0% | |
| ! | TTGGTGTCCAGCAAACTGAC+CGG | + | chr1_1:75847014-75847033 | Msa0044310:intron | 50.0% |
| CCGTGTTTGACAAGTCGCAA+AGG | - | chr1_1:75847168-75847187 | None:intergenic | 50.0% | |
| CTTTCCGGACGGGAAAATCT+TGG | - | chr1_1:75848016-75848035 | None:intergenic | 50.0% | |
| ! | CAAGATTTTCCCGTCCGGAA+AGG | + | chr1_1:75848014-75848033 | Msa0044310:intron | 50.0% |
| AATGGGAAACCTTTCCGGAC+GGG | - | chr1_1:75848026-75848045 | None:intergenic | 50.0% | |
| !!! | GTTGGTTTTCCAGTCAGGTG+TGG | + | chr1_1:75848551-75848570 | Msa0044310:intron | 50.0% |
| AGTTGAGAACCACACCTGAC+TGG | - | chr1_1:75848563-75848582 | None:intergenic | 50.0% | |
| GTAGCTATCAGCATCCCAAC+TGG | + | chr1_1:75848622-75848641 | Msa0044310:intron | 50.0% | |
| CCCAACTGGGACATCATGAA+TGG | + | chr1_1:75848636-75848655 | Msa0044310:intron | 50.0% | |
| ! | AGGGCACCAATGCCAATAGA+TGG | - | chr1_1:75849233-75849252 | None:intergenic | 50.0% |
| TCGACCATCCCAAGAACTAC+AGG | + | chr1_1:75849976-75849995 | Msa0044310:CDS | 50.0% | |
| ACCATCCCAAGAACTACAGG+TGG | + | chr1_1:75849979-75849998 | Msa0044310:CDS | 50.0% | |
| TCCACCTGTAGTTCTTGGGA+TGG | - | chr1_1:75849983-75850002 | None:intergenic | 50.0% | |
| CCTGTCCACCTGTAGTTCTT+GGG | - | chr1_1:75849987-75850006 | None:intergenic | 50.0% | |
| ACCTGTCCACCTGTAGTTCT+TGG | - | chr1_1:75849988-75850007 | None:intergenic | 50.0% | |
| TGGAATGTCACTAGGCCACA+AGG | + | chr1_1:75850785-75850804 | Msa0044310:CDS | 50.0% | |
| ! | CACTAGGCCACAAGGTTTTG+AGG | + | chr1_1:75850793-75850812 | Msa0044310:CDS | 50.0% |
| TTGAGGCTGTAATGCGTGTG+AGG | + | chr1_1:75850810-75850829 | Msa0044310:CDS | 50.0% | |
| GTTGAGGAGTTCAAGGTCCA+GGG | - | chr1_1:75851507-75851526 | None:intergenic | 50.0% | |
| AGTTGAGGAGTTCAAGGTCC+AGG | - | chr1_1:75851508-75851527 | None:intergenic | 50.0% | |
| GAGTATCCAAGTCAGCAGCA+CGG | - | chr1_1:75852134-75852153 | None:intergenic | 50.0% | |
| TGTTCCCGAACAAGAGGAAG+TGG | - | chr1_1:75852437-75852456 | None:intergenic | 50.0% | |
| GTCACTTGTTCCCGAACAAG+AGG | - | chr1_1:75852443-75852462 | None:intergenic | 50.0% | |
| CGGACAACTTATTCTTCCGG+AGG | + | chr1_1:75852526-75852545 | Msa0044310:CDS | 50.0% | |
| !! | TCAGCGTTGACCAAGAGTAC+AGG | + | chr1_1:75853045-75853064 | Msa0044310:intron | 50.0% |
| !! | CAGCGTTGACCAAGAGTACA+GGG | + | chr1_1:75853046-75853065 | Msa0044310:intron | 50.0% |
| ACCGCTTGTGTATCCTAGGA+TGG | + | chr1_1:75853146-75853165 | Msa0044310:CDS | 50.0% | |
| GCTTGTGTATCCTAGGATGG+TGG | + | chr1_1:75853149-75853168 | Msa0044310:CDS | 50.0% | |
| TGTTGGAGACTCTGTGAGTC+CGG | + | chr1_1:75853575-75853594 | Msa0044310:CDS | 50.0% | |
| CTGTGAGTCCGGATATTGTG+CGG | + | chr1_1:75853586-75853605 | Msa0044310:CDS | 50.0% | |
| ! | GATAATGGCAAGGCAACAGG+GGG | - | chr1_1:75853691-75853710 | None:intergenic | 50.0% |
| TGCAGGAAAGGTGATCCATC+AGG | + | chr1_1:75854329-75854348 | Msa0044310:CDS | 50.0% | |
| ATGCTGTGCTTCTCGTCTGT+TGG | + | chr1_1:75854831-75854850 | Msa0044310:intron | 50.0% | |
| ! | TGGTGGATGGCAAGTAGGAT+AGG | - | chr1_1:75854957-75854976 | None:intergenic | 50.0% |
| TATCCTACTTGCCATCCACC+AGG | + | chr1_1:75854956-75854975 | Msa0044310:intron | 50.0% | |
| ! | ATTCCTGGTGGATGGCAAGT+AGG | - | chr1_1:75854962-75854981 | None:intergenic | 50.0% |
| ! | ATGGTAGAAGACAAGAGCGC+AGG | + | chr1_1:75854998-75855017 | Msa0044310:CDS | 50.0% |
| CACCCATCATTGGGTACTTG+GGG | - | chr1_1:75855148-75855167 | None:intergenic | 50.0% | |
| CTCACCCATCATTGGGTACT+TGG | - | chr1_1:75855150-75855169 | None:intergenic | 50.0% | |
| GCATCTCTACGTCGACCATC+TGG | - | chr1_1:75844994-75845013 | None:intergenic | 55.0% | |
| !! | ACACAGCAGGCATTGGCTCA+CGG | - | chr1_1:75845499-75845518 | None:intergenic | 55.0% |
| ! | GGCCTTTGGTGCAGCAATCA+AGG | + | chr1_1:75847556-75847575 | Msa0044310:CDS | 55.0% |
| GGTAGAGGGAGGCAGTTAGT+TGG | - | chr1_1:75848173-75848192 | None:intergenic | 55.0% | |
| GTGGCAGATAAGGTAGAGGG+AGG | - | chr1_1:75848184-75848203 | None:intergenic | 55.0% | |
| ! | GGCTGGCCCGCTTAATTTCT+TGG | + | chr1_1:75848254-75848273 | Msa0044310:intron | 55.0% |
| AGACACTGGAGGGAAGCTGT+TGG | + | chr1_1:75848533-75848552 | Msa0044310:CDS | 55.0% | |
| TTCGGCTTCGCGTGCAGAAA+GGG | - | chr1_1:75849252-75849271 | None:intergenic | 55.0% | |
| CCCAAGAACTACAGGTGGAC+AGG | + | chr1_1:75849984-75850003 | Msa0044310:CDS | 55.0% | |
| AATGCGTGTGAGGTGCAGTC+AGG | + | chr1_1:75850820-75850839 | Msa0044310:CDS | 55.0% | |
| ! | TCTGTTCCGTGCTGCTGACT+TGG | + | chr1_1:75852125-75852144 | Msa0044310:CDS | 55.0% |
| !! | GGCAAAAGCTTTAGGGCCTC+CGG | - | chr1_1:75852545-75852564 | None:intergenic | 55.0% |
| CTGGCAGGTTTAAGCTCTGC+AGG | + | chr1_1:75854312-75854331 | Msa0044310:intron | 55.0% | |
| ! | CAGACGAGAAGCACAGCATG+AGG | - | chr1_1:75854830-75854849 | None:intergenic | 55.0% |
| ! | GTAGAAGACAAGAGCGCAGG+TGG | + | chr1_1:75855001-75855020 | Msa0044310:CDS | 55.0% |
| TGGATGCAGGAGCAGAGAGG+AGG | - | chr1_1:75845771-75845790 | None:intergenic | 60.0% | |
| CAAGGGCCGAATATTGCCGC+AGG | + | chr1_1:75846924-75846943 | Msa0044310:intron | 60.0% | |
| CTTCGGCTTCGCGTGCAGAA+AGG | - | chr1_1:75849253-75849272 | None:intergenic | 60.0% | |
| CTTTCTGCACGCGAAGCCGA+AGG | + | chr1_1:75849251-75849270 | Msa0044310:CDS | 60.0% | |
| CAGGGGTTGGGTAGCTCAAC+TGG | - | chr1_1:75851553-75851572 | None:intergenic | 60.0% | |
| GCAACAGGGGGTTGGAGAGA+GGG | - | chr1_1:75853679-75853698 | None:intergenic | 60.0% | |
| ATGGCAAGGCAACAGGGGGT+TGG | - | chr1_1:75853687-75853706 | None:intergenic | 60.0% | |
| GGCAACAGGGGGTTGGAGAG+AGG | - | chr1_1:75853680-75853699 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 75844985 | 75855414 | 75844985 | ID=Msa0044310;Name=Msa0044310 |
| chr1_1 | mRNA | 75844985 | 75855414 | 75844985 | ID=Msa0044310-mRNA-1;Parent=Msa0044310;Name=Msa0044310-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.27|0.26|1|0.94|0.89|19|327|614 |
| chr1_1 | exon | 75844985 | 75845074 | 75844985 | ID=Msa0044310-mRNA-1:exon:25654;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75845494 | 75845613 | 75845494 | ID=Msa0044310-mRNA-1:exon:25655;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75846676 | 75846756 | 75846676 | ID=Msa0044310-mRNA-1:exon:25656;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75847288 | 75847365 | 75847288 | ID=Msa0044310-mRNA-1:exon:25657;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75847485 | 75847577 | 75847485 | ID=Msa0044310-mRNA-1:exon:25658;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75848513 | 75848567 | 75848513 | ID=Msa0044310-mRNA-1:exon:25659;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75849225 | 75849301 | 75849225 | ID=Msa0044310-mRNA-1:exon:25660;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75849711 | 75849782 | 75849711 | ID=Msa0044310-mRNA-1:exon:25661;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75849922 | 75850005 | 75849922 | ID=Msa0044310-mRNA-1:exon:25662;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75850722 | 75850841 | 75850722 | ID=Msa0044310-mRNA-1:exon:25663;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75850919 | 75850987 | 75850919 | ID=Msa0044310-mRNA-1:exon:25664;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75851829 | 75851906 | 75851829 | ID=Msa0044310-mRNA-1:exon:25665;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75852039 | 75852177 | 75852039 | ID=Msa0044310-mRNA-1:exon:25666;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75852411 | 75852578 | 75852411 | ID=Msa0044310-mRNA-1:exon:25667;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75853049 | 75853194 | 75853049 | ID=Msa0044310-mRNA-1:exon:25668;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75853471 | 75853650 | 75853471 | ID=Msa0044310-mRNA-1:exon:25669;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75854164 | 75854216 | 75854164 | ID=Msa0044310-mRNA-1:exon:25670;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75854319 | 75854350 | 75854319 | ID=Msa0044310-mRNA-1:exon:25671;Parent=Msa0044310-mRNA-1 |
| chr1_1 | exon | 75854978 | 75855414 | 75854978 | ID=Msa0044310-mRNA-1:exon:25672;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75844985 | 75845074 | 75844985 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75845494 | 75845613 | 75845494 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75846676 | 75846756 | 75846676 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75847288 | 75847365 | 75847288 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75847485 | 75847577 | 75847485 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75848513 | 75848567 | 75848513 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75849225 | 75849301 | 75849225 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75849711 | 75849782 | 75849711 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75849922 | 75850005 | 75849922 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75850722 | 75850841 | 75850722 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75850919 | 75850987 | 75850919 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75851829 | 75851906 | 75851829 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75852039 | 75852177 | 75852039 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75852411 | 75852578 | 75852411 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75853049 | 75853194 | 75853049 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75853471 | 75853650 | 75853471 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75854164 | 75854216 | 75854164 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75854319 | 75854350 | 75854319 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | CDS | 75854978 | 75855087 | 75854978 | ID=Msa0044310-mRNA-1:cds;Parent=Msa0044310-mRNA-1 |
| chr1_1 | three_prime_UTR | 75855088 | 75855414 | 75855088 | ID=Msa0044310-mRNA-1:three_prime_utr;Parent=Msa0044310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
