AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0702620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0702620 MtrunA17_Chr8g0380471 96.868 479 15 0 1 479 1 479 0.0 962
Msa0702620 MtrunA17_Chr8g0388921 53.191 470 213 2 13 475 7 476 0.0 520
Msa0702620 MtrunA17_Chr8g0380931 38.661 463 265 9 22 474 50 503 2.01e-112 341
Msa0702620 MtrunA17_Chr5g0443731 38.288 444 270 4 34 475 29 470 8.77e-109 331
Msa0702620 MtrunA17_Chr5g0443401 38.053 452 267 8 31 477 35 478 1.22e-105 323
Msa0702620 MtrunA17_Chr3g0107511 37.421 473 283 8 11 475 9 476 4.23e-104 319
Msa0702620 MtrunA17_Chr3g0107501 36.667 450 273 6 33 475 32 476 7.06e-102 313
Msa0702620 MtrunA17_Chr8g0369791 32.708 480 298 13 1 473 1 462 6.07e-77 248
Msa0702620 MtrunA17_Chr5g0403931 33.333 477 298 12 9 474 11 478 6.74e-77 248
Msa0702620 MtrunA17_Chr7g0226771 32.305 486 308 11 1 479 2 473 9.58e-76 245
Msa0702620 MtrunA17_Chr5g0408181 32.780 482 297 14 1 475 1 462 9.19e-74 240
Msa0702620 MtrunA17_Chr4g0044851 30.512 449 295 9 29 473 32 467 5.71e-66 219
Msa0702620 MtrunA17_Chr5g0397971 27.208 419 295 6 34 448 31 443 2.59e-61 207
Msa0702620 MtrunA17_Chr1g0153371 28.450 471 322 7 8 472 4 465 2.72e-60 205
Msa0702620 MtrunA17_Chr3g0113321 29.978 457 297 15 25 471 20 463 9.62e-60 204
Msa0702620 MtrunA17_Chr5g0400421 28.898 481 326 10 6 473 10 487 2.44e-59 202
Msa0702620 MtrunA17_Chr8g0341951 28.194 454 307 11 4 448 3 446 5.98e-59 201
Msa0702620 MtrunA17_Chr3g0141801 28.728 456 302 11 30 473 37 481 3.34e-58 199
Msa0702620 MtrunA17_Chr8g0372411 27.640 445 303 9 35 471 40 473 7.15e-58 198
Msa0702620 MtrunA17_Chr4g0044841 29.241 448 299 10 31 473 35 469 9.01e-58 198
Msa0702620 MtrunA17_Chr7g0219961 29.978 457 290 15 27 474 26 461 1.99e-56 194
Msa0702620 MtrunA17_Chr3g0078411 27.922 462 294 11 27 474 26 462 3.96e-56 193
Msa0702620 MtrunA17_Chr1g0164371 29.614 466 312 9 12 473 20 473 1.17e-55 192
Msa0702620 MtrunA17_Chr2g0293411 28.667 450 315 5 30 474 37 485 8.08e-55 191
Msa0702620 MtrunA17_Chr8g0373441 31.750 400 258 10 14 406 13 404 1.21e-54 188
Msa0702620 MtrunA17_Chr6g0455461 27.489 462 296 10 27 474 26 462 1.42e-54 189
Msa0702620 MtrunA17_Chr8g0372711 28.315 445 302 6 37 474 49 483 1.45e-52 184
Msa0702620 MtrunA17_Chr8g0381541 26.371 474 335 8 7 467 8 480 2.26e-52 184
Msa0702620 MtrunA17_Chr2g0293421 26.754 456 329 5 27 479 38 491 1.02e-51 182
Msa0702620 MtrunA17_Chr8g0339861 27.311 476 319 10 11 468 12 478 7.45e-51 180
Msa0702620 MtrunA17_Chr8g0381571 27.069 447 312 8 7 440 8 453 2.73e-50 178
Msa0702620 MtrunA17_Chr5g0400411 27.917 480 331 9 6 473 10 486 1.98e-48 173
Msa0702620 MtrunA17_Chr6g0478161 24.587 484 334 11 12 477 21 491 8.68e-47 169
Msa0702620 MtrunA17_Chr3g0089361 26.126 444 317 7 34 474 40 475 4.00e-45 164
Msa0702620 MtrunA17_Chr3g0089351 26.119 402 287 7 74 474 1 393 1.36e-42 155
Msa0702620 MtrunA17_Chr5g0404861 36.552 145 88 2 333 475 16 158 2.38e-26 104
Msa0702620 MtrunA17_Chr0c19g0493771 31.937 191 120 3 268 452 436 622 4.00e-25 108
Msa0702620 MtrunA17_Chr8g0381551 24.688 320 228 7 7 314 8 326 1.92e-23 101
Msa0702620 MtrunA17_Chr8g0354531 26.382 398 234 16 116 474 266 643 2.32e-23 103
Msa0702620 MtrunA17_Chr8g0334891 23.991 446 305 9 26 453 30 459 7.95e-23 101
Msa0702620 MtrunA17_Chr2g0313821 27.027 370 232 12 110 450 129 489 2.91e-22 99.8
Msa0702620 MtrunA17_Chr6g0463541 39.423 104 62 1 368 471 3 105 9.46e-22 90.1
Msa0702620 MtrunA17_Chr7g0260821 22.967 492 303 20 32 474 37 501 1.61e-21 97.4
Msa0702620 MtrunA17_Chr2g0307291 25.385 390 254 11 114 474 135 516 1.41e-20 94.7
Msa0702620 MtrunA17_Chr5g0437001 38.889 108 63 2 339 443 1 108 3.74e-20 87.4
Msa0702620 MtrunA17_Chr1g0198191 24.951 513 292 20 11 464 21 499 4.47e-20 93.2
Msa0702620 MtrunA17_Chr8g0334941 26.224 286 184 7 184 453 30 304 5.00e-20 91.3
Msa0702620 MtrunA17_Chr1g0179811 26.766 269 170 7 224 474 278 537 5.15e-20 92.8
Msa0702620 MtrunA17_Chr2g0307301 24.938 401 238 11 114 477 135 509 7.47e-20 92.4
Msa0702620 MtrunA17_Chr7g0260831 21.901 484 316 19 32 473 36 499 1.65e-19 91.3
Msa0702620 MtrunA17_Chr6g0457421 28.102 274 173 10 216 475 243 506 1.66e-19 91.3
Msa0702620 MtrunA17_Chr3g0128461 29.297 256 159 9 230 474 278 522 1.87e-19 91.3
Msa0702620 MtrunA17_Chr5g0404881 28.502 207 138 6 27 228 28 229 1.95e-19 87.4
Msa0702620 MtrunA17_Chr5g0401691 28.571 224 148 4 234 448 256 476 2.55e-19 90.9
Msa0702620 MtrunA17_Chr2g0313791 27.875 287 168 10 215 474 235 509 2.60e-19 90.5
Msa0702620 MtrunA17_Chr4g0056951 31.674 221 137 7 237 448 262 477 2.96e-19 90.5
Msa0702620 MtrunA17_Chr7g0215181 25.641 273 184 7 215 475 243 508 3.36e-19 90.5
Msa0702620 MtrunA17_Chr8g0336361 25.826 333 173 12 199 473 239 555 4.80e-19 90.1
Msa0702620 MtrunA17_Chr6g0472221 28.626 262 165 8 227 475 273 525 6.69e-19 89.4
Msa0702620 MtrunA17_Chr1g0203151 27.170 265 169 8 224 475 257 510 6.86e-19 89.4
Msa0702620 MtrunA17_Chr1g0203141 26.415 265 171 8 224 475 261 514 7.08e-19 89.4
Msa0702620 MtrunA17_Chr2g0286091 22.961 466 320 13 30 467 37 491 9.33e-19 89.0
Msa0702620 MtrunA17_Chr4g0000151 35.514 107 69 0 359 465 25 131 1.52e-18 82.4
Msa0702620 MtrunA17_Chr8g0354571 26.173 405 237 16 111 474 139 522 1.68e-18 88.2
Msa0702620 MtrunA17_Chr4g0000171 23.827 277 206 4 34 308 43 316 4.21e-18 85.5
Msa0702620 MtrunA17_Chr3g0089381 28.646 192 131 4 179 369 4 190 4.28e-18 83.2
Msa0702620 MtrunA17_Chr1g0161671 24.232 293 216 5 27 314 20 311 5.90e-18 84.7
Msa0702620 MtrunA17_Chr2g0288661 23.724 392 258 11 114 474 135 516 8.86e-18 85.9
Msa0702620 MtrunA17_Chr2g0313751 25.995 377 219 11 114 450 160 516 1.52e-17 85.5
Msa0702620 MtrunA17_Chr5g0429651 26.408 284 180 10 217 475 228 507 1.81e-17 85.1
Msa0702620 MtrunA17_Chr1g0160861 32.370 173 109 4 283 450 137 306 1.83e-17 83.6
Msa0702620 MtrunA17_Chr1g0160851 32.164 171 108 4 285 450 298 465 3.95e-17 84.0
Msa0702620 MtrunA17_Chr7g0235261 26.761 284 173 10 209 473 240 507 6.16e-17 83.2
Msa0702620 MtrunA17_Chr2g0313761 25.333 375 224 10 114 450 128 484 7.05e-17 83.2
Msa0702620 MtrunA17_Chr4g0000161 25.175 286 207 5 26 308 35 316 7.10e-17 81.6
Msa0702620 MtrunA17_Chr2g0313781 26.172 256 163 7 215 450 252 501 8.59e-17 82.8
Msa0702620 MtrunA17_Chr2g0313831 24.565 517 329 19 6 474 11 514 1.38e-16 82.4
Msa0702620 MtrunA17_Chr4g0057001 29.412 221 145 7 237 450 268 484 1.67e-16 82.0
Msa0702620 MtrunA17_Chr4g0035921 28.571 175 115 3 282 450 311 481 1.78e-16 82.0
Msa0702620 MtrunA17_Chr2g0313801 23.836 365 242 10 114 450 133 489 2.32e-16 81.6
Msa0702620 MtrunA17_Chr8g0381561 30.909 110 76 0 338 447 2 111 3.06e-16 75.1
Msa0702620 MtrunA17_Chr4g0004601 25.763 295 181 9 203 473 248 528 3.08e-16 81.3
Msa0702620 MtrunA17_Chr1g0193811 26.354 277 178 9 217 475 247 515 4.03e-16 80.9
Msa0702620 MtrunA17_Chr4g0014051 24.808 391 250 13 114 477 146 519 4.65e-16 80.5
Msa0702620 MtrunA17_Chr4g0053621 26.761 213 150 5 245 455 262 470 5.24e-16 80.5
Msa0702620 MtrunA17_Chr8g0354511 25.266 376 228 12 111 450 139 497 5.65e-16 80.5
Msa0702620 MtrunA17_Chr5g0436981 33.094 139 89 4 30 166 24 160 6.02e-16 76.3
Msa0702620 MtrunA17_Chr1g0184421 26.667 255 150 9 227 466 252 484 6.26e-16 80.1
Msa0702620 MtrunA17_Chr5g0431511 26.515 264 175 7 198 450 215 470 8.71e-16 79.7
Msa0702620 MtrunA17_Chr6g0463551 30.380 158 98 3 217 367 33 185 9.36e-16 75.9
Msa0702620 MtrunA17_Chr4g0011851 30.811 185 114 5 283 460 14 191 1.04e-15 76.3
Msa0702620 MtrunA17_Chr8g0346261 26.549 226 150 5 231 448 296 513 1.48e-15 79.3
Msa0702620 MtrunA17_Chr4g0038271 26.016 246 165 6 221 451 291 534 2.26e-15 78.6
Msa0702620 MtrunA17_Chr5g0403321 30.455 220 134 7 241 450 264 474 2.39e-15 78.6
Msa0702620 MtrunA17_Chr5g0401681 27.919 197 133 5 255 448 269 459 2.60e-15 78.2
Msa0702620 MtrunA17_Chr2g0280081 29.412 187 123 3 271 448 787 973 2.84e-15 79.0
Msa0702620 MtrunA17_Chr2g0280081 28.079 203 132 4 271 459 286 488 3.62e-12 68.9
Msa0702620 MtrunA17_Chr8g0362731 27.397 219 137 6 268 477 194 399 3.63e-15 77.4
Msa0702620 MtrunA17_Chr2g0280011 29.651 172 112 3 286 448 9 180 4.01e-15 74.3
Msa0702620 MtrunA17_Chr1g0184461 26.295 251 156 8 227 466 252 484 4.13e-15 77.8
Msa0702620 MtrunA17_Chr2g0314731 24.793 363 226 9 117 473 162 483 4.67e-15 77.4
Msa0702620 MtrunA17_Chr8g0339331 25.379 264 171 9 224 473 249 500 4.73e-15 77.4
Msa0702620 MtrunA17_Chr8g0339311 26.459 257 161 7 242 476 279 529 5.10e-15 77.4
Msa0702620 MtrunA17_Chr6g0458561 30.000 200 123 5 281 473 324 513 5.32e-15 77.4
Msa0702620 MtrunA17_Chr3g0104351 25.301 249 167 6 228 458 249 496 5.54e-15 77.4
Msa0702620 MtrunA17_Chr1g0204271 25.828 302 191 11 197 471 206 501 5.72e-15 77.0
Msa0702620 MtrunA17_Chr2g0313771 23.715 506 302 18 6 450 14 496 7.35e-15 77.0
Msa0702620 MtrunA17_Chr5g0403331 30.233 172 110 4 285 450 305 472 7.44e-15 77.0
Msa0702620 MtrunA17_Chr7g0235551 27.049 244 161 6 223 456 244 480 8.36e-15 76.6
Msa0702620 MtrunA17_Chr1g0174441 26.953 256 167 6 211 450 246 497 8.75e-15 76.6
Msa0702620 MtrunA17_Chr5g0446131 25.000 372 229 11 114 450 131 487 1.13e-14 76.3
Msa0702620 MtrunA17_Chr4g0039391 27.004 237 155 6 234 455 242 475 1.19e-14 76.3
Msa0702620 MtrunA17_Chr1g0176831 25.974 231 158 4 248 473 291 513 1.24e-14 76.3
Msa0702620 MtrunA17_Chr8g0364651 26.577 222 152 4 241 454 254 472 1.26e-14 76.3
Msa0702620 MtrunA17_Chr8g0373431 47.541 61 31 1 414 474 5 64 1.41e-14 68.6
Msa0702620 MtrunA17_Chr2g0313811 25.161 310 199 10 165 450 201 501 1.67e-14 75.9
Msa0702620 MtrunA17_Chr5g0403351 25.792 221 146 6 241 450 258 471 1.95e-14 75.5
Msa0702620 MtrunA17_Chr1g0205361 30.409 171 111 3 285 450 298 465 2.49e-14 75.1
Msa0702620 MtrunA17_Chr2g0296651 27.805 205 143 4 248 451 262 462 2.49e-14 75.1
Msa0702620 MtrunA17_Chr1g0174481 27.686 242 156 6 222 450 235 470 3.00e-14 75.1
Msa0702620 MtrunA17_Chr3g0101611 26.756 299 194 10 174 451 178 472 3.16e-14 74.7
Msa0702620 MtrunA17_Chr1g0164321 24.896 241 160 4 228 451 285 521 5.02e-14 74.3
Msa0702620 MtrunA17_Chr1g0156101 27.344 256 164 8 213 450 228 479 5.06e-14 74.3
Msa0702620 MtrunA17_Chr1g0174461 26.389 216 145 6 240 447 263 472 5.50e-14 74.3
Msa0702620 MtrunA17_Chr1g0174451 25.581 258 174 4 207 450 223 476 5.77e-14 73.9
Msa0702620 MtrunA17_Chr2g0314721 26.407 231 157 5 248 473 272 494 6.22e-14 73.9
Msa0702620 MtrunA17_Chr4g0011961 29.825 171 112 3 285 450 296 463 6.55e-14 73.9
Msa0702620 MtrunA17_Chr8g0351421 26.190 252 167 7 241 475 260 509 6.61e-14 73.9
Msa0702620 MtrunA17_Chr4g0013471 23.729 295 213 7 34 325 43 328 6.70e-14 73.6
Msa0702620 MtrunA17_Chr7g0265611 26.754 228 149 5 235 450 264 485 6.85e-14 73.9
Msa0702620 MtrunA17_Chr8g0362481 27.459 244 159 7 222 450 166 406 7.03e-14 73.6
Msa0702620 MtrunA17_Chr2g0280071 28.042 189 127 3 271 450 319 507 7.37e-14 74.3
Msa0702620 MtrunA17_Chr4g0020041 26.446 242 156 7 221 450 239 470 7.75e-14 73.6
Msa0702620 MtrunA17_Chr4g0063221 26.354 277 178 9 215 471 244 514 9.99e-14 73.6
Msa0702620 MtrunA17_Chr6g0463621 29.609 179 112 4 286 455 1 174 1.20e-13 69.7
Msa0702620 MtrunA17_Chr4g0026941 25.287 261 176 8 221 473 287 536 1.39e-13 72.8
Msa0702620 MtrunA17_Chr4g0052861 27.155 232 157 6 232 456 240 466 1.66e-13 72.8
Msa0702620 MtrunA17_Chr4g0011901 27.530 247 163 7 221 460 235 472 1.77e-13 72.4
Msa0702620 MtrunA17_Chr2g0280121 28.125 224 144 6 266 475 288 508 1.91e-13 72.4
Msa0702620 MtrunA17_Chr5g0446161 27.962 211 137 4 250 450 263 468 1.98e-13 72.4
Msa0702620 MtrunA17_Chr8g0351461 25.296 253 168 8 241 475 259 508 2.56e-13 72.0
Msa0702620 MtrunA17_Chr1g0161661 35.443 79 51 0 387 465 11 89 3.83e-13 65.5
Msa0702620 MtrunA17_Chr7g0248991 30.345 145 97 2 268 412 218 358 3.92e-13 70.9
Msa0702620 MtrunA17_Chr5g0396521 25.792 221 119 6 267 450 330 542 4.09e-13 71.6
Msa0702620 MtrunA17_Chr7g0255131 26.446 242 157 8 249 474 270 506 4.14e-13 71.2
Msa0702620 MtrunA17_Chr6g0451781 28.936 235 146 9 224 441 291 521 4.59e-13 71.2
Msa0702620 MtrunA17_Chr3g0101731 24.691 243 171 6 217 450 230 469 5.29e-13 71.2
Msa0702620 MtrunA17_Chr4g0058281 25.926 216 152 3 240 450 269 481 5.79e-13 70.9
Msa0702620 MtrunA17_Chr6g0451811 30.636 173 102 7 282 441 2 169 5.80e-13 68.2
Msa0702620 MtrunA17_Chr8g0351441 25.296 253 168 8 241 475 259 508 6.03e-13 70.9
Msa0702620 MtrunA17_Chr6g0463791 30.114 176 110 3 288 455 300 470 7.04e-13 70.5
Msa0702620 MtrunA17_Chr8g0362701 26.277 274 180 8 217 475 230 496 7.68e-13 70.5
Msa0702620 MtrunA17_Chr1g0162811 28.324 173 117 2 282 450 299 468 8.49e-13 70.5
Msa0702620 MtrunA17_Chr1g0174431 29.379 177 111 4 285 450 1 174 9.40e-13 67.4
Msa0702620 MtrunA17_Chr8g0372251 24.454 229 148 6 239 450 253 473 1.06e-12 70.1
Msa0702620 MtrunA17_Chr7g0218601 21.095 493 327 18 15 470 15 482 1.13e-12 70.1
Msa0702620 MtrunA17_Chr8g0387001 26.104 249 145 8 227 451 246 479 1.14e-12 70.1
Msa0702620 MtrunA17_Chr5g0419691 30.857 175 111 4 300 469 312 481 1.34e-12 69.7
Msa0702620 MtrunA17_Chr8g0351801 28.022 182 114 3 283 450 308 486 1.40e-12 69.7
Msa0702620 MtrunA17_Chr7g0258211 26.630 184 113 3 283 450 303 480 1.43e-12 69.7
Msa0702620 MtrunA17_Chr5g0405001 24.506 253 163 6 220 454 241 483 1.62e-12 69.7
Msa0702620 MtrunA17_Chr4g0046331 27.374 179 112 5 288 453 304 477 1.71e-12 69.3
Msa0702620 MtrunA17_Chr6g0463801 28.718 195 125 5 264 450 277 465 2.86e-12 68.9
Msa0702620 MtrunA17_Chr4g0011941 29.240 171 113 4 285 450 1 168 2.99e-12 65.9
Msa0702620 MtrunA17_Chr1g0174471 27.397 219 146 4 240 450 278 491 3.42e-12 68.6
Msa0702620 MtrunA17_Chr5g0400391 33.333 84 56 0 389 472 1 84 3.89e-12 62.8
Msa0702620 MtrunA17_Chr5g0409051 27.179 195 122 5 269 450 292 479 3.98e-12 68.2
Msa0702620 MtrunA17_Chr2g0296661 29.016 193 132 4 258 449 277 465 5.54e-12 67.8
Msa0702620 MtrunA17_Chr8g0387101 27.225 191 129 3 271 451 287 477 6.84e-12 67.4
Msa0702620 MtrunA17_Chr6g0451741 30.303 231 138 10 224 438 279 502 6.97e-12 67.8
Msa0702620 MtrunA17_Chr1g0161641 34.211 76 50 0 372 447 13 88 1.18e-11 60.8
Msa0702620 MtrunA17_Chr6g0466941 27.778 216 137 8 241 441 271 482 1.36e-11 66.6
Msa0702620 MtrunA17_Chr5g0445531 25.368 272 183 8 195 450 200 467 1.46e-11 66.6
Msa0702620 MtrunA17_Chr4g0046321 27.119 177 113 5 288 453 304 475 1.51e-11 66.6
Msa0702620 MtrunA17_Chr4g0052881 27.136 199 140 3 251 448 266 460 1.63e-11 66.2
Msa0702620 MtrunA17_Chr7g0218611 24.370 238 166 5 219 449 237 467 1.68e-11 66.2
Msa0702620 MtrunA17_Chr3g0101721 27.311 238 159 7 221 450 240 471 1.76e-11 66.2
Msa0702620 MtrunA17_Chr4g0046351 26.257 179 116 5 288 455 304 477 1.84e-11 66.2
Msa0702620 MtrunA17_Chr8g0348751 23.954 263 173 10 232 473 251 507 1.99e-11 66.2
Msa0702620 MtrunA17_Chr8g0354541 29.508 183 113 6 301 474 1 176 2.09e-11 62.8
Msa0702620 MtrunA17_Chr1g0205371 32.164 171 108 3 285 450 299 466 4.07e-11 65.1
Msa0702620 MtrunA17_Chr3g0101691 25.000 240 166 5 221 450 238 473 4.19e-11 65.1
Msa0702620 MtrunA17_Chr8g0382901 27.966 236 155 8 224 450 214 443 4.52e-11 65.5
Msa0702620 MtrunA17_Chr2g0280041 28.042 189 127 3 271 450 318 506 6.90e-11 64.3
Msa0702620 MtrunA17_Chr1g0178971 24.176 273 173 8 226 475 250 511 9.64e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0702620 AT5G36110.1 48.546 447 222 3 33 475 33 475 1.34e-151 441
Msa0702620 AT5G36110.2 45.014 351 186 2 33 380 33 379 6.91e-102 310
Msa0702620 AT2G42850.1 35.371 458 283 8 22 475 34 482 7.23e-92 288
Msa0702620 AT5G45340.1 35.010 477 290 10 1 474 1 460 2.65e-90 283
Msa0702620 AT4G19230.1 33.689 469 286 10 13 473 8 459 1.75e-83 265
Msa0702620 AT5G45340.2 34.444 450 275 10 1 447 1 433 7.91e-80 255
Msa0702620 AT5G36140.1 41.137 299 171 2 19 316 17 311 5.83e-78 246
Msa0702620 AT4G19230.2 33.108 444 272 10 13 448 8 434 1.75e-74 243
Msa0702620 AT3G19270.2 31.263 467 307 8 6 470 6 460 5.41e-73 238
Msa0702620 AT2G29090.2 29.933 451 301 8 28 475 43 481 2.66e-70 231
Msa0702620 AT2G29090.1 29.933 451 301 8 28 475 43 481 2.66e-70 231
Msa0702620 AT3G50660.1 31.677 483 281 11 31 473 36 509 1.13e-69 231
Msa0702620 AT3G19270.1 31.011 445 293 8 6 448 6 438 1.63e-66 221
Msa0702620 AT1G12740.1 27.865 445 310 8 34 474 31 468 5.38e-64 215
Msa0702620 AT1G12740.4 27.494 451 310 9 34 474 31 474 1.07e-61 209
Msa0702620 AT4G36380.1 29.372 446 304 8 34 473 69 509 2.26e-61 209
Msa0702620 AT1G12740.2 27.273 451 311 9 34 474 31 474 2.96e-61 207
Msa0702620 AT2G29090.3 32.081 346 226 5 132 475 48 386 1.11e-60 204
Msa0702620 AT5G05690.1 29.911 448 293 11 32 471 29 463 3.42e-59 202
Msa0702620 AT2G32440.2 28.632 475 321 8 12 473 15 484 7.90e-59 201
Msa0702620 AT2G32440.1 28.632 475 321 8 12 473 15 484 7.90e-59 201
Msa0702620 AT1G19630.1 26.947 475 336 9 6 474 4 473 6.61e-57 196
Msa0702620 AT5G36130.1 59.420 138 55 1 339 475 1 138 5.97e-56 183
Msa0702620 AT3G13730.1 27.928 444 304 9 35 471 52 486 6.85e-56 194
Msa0702620 AT5G14400.2 28.859 447 282 10 39 478 1 418 1.43e-55 191
Msa0702620 AT2G42850.2 32.507 363 233 7 22 380 34 388 1.60e-54 187
Msa0702620 AT1G73340.1 28.033 478 310 10 11 473 19 477 1.13e-53 187
Msa0702620 AT3G13730.2 28.095 420 288 8 35 447 52 464 1.25e-53 187
Msa0702620 AT1G19630.3 27.273 418 297 7 33 448 34 446 5.04e-53 185
Msa0702620 AT1G05160.2 28.859 447 309 8 34 474 45 488 6.92e-53 186
Msa0702620 AT1G05160.1 28.859 447 309 8 34 474 45 488 6.92e-53 186
Msa0702620 AT5G14400.3 29.257 417 260 9 39 448 1 389 3.97e-52 181
Msa0702620 AT3G30180.1 26.490 453 306 11 8 449 3 439 5.12e-50 177
Msa0702620 AT3G50660.2 30.446 404 245 9 31 406 36 431 5.98e-49 174
Msa0702620 AT5G38970.1 25.630 476 333 11 6 475 4 464 2.09e-47 170
Msa0702620 AT5G05690.2 28.684 380 260 7 32 409 29 399 5.98e-45 162
Msa0702620 AT3G44970.1 29.039 458 290 13 34 474 35 474 7.70e-44 161
Msa0702620 AT1G19630.2 26.649 379 272 6 34 410 35 409 9.92e-44 160
Msa0702620 AT1G78490.1 29.318 440 275 15 34 455 35 456 8.07e-43 158
Msa0702620 AT5G14400.1 27.877 391 247 9 95 478 2 364 8.56e-43 155
Msa0702620 AT1G55940.2 26.512 430 298 12 34 451 45 468 1.05e-40 153
Msa0702620 AT5G05690.3 27.966 354 236 9 125 471 3 344 1.94e-40 149
Msa0702620 AT4G15300.2 26.291 426 290 11 34 450 35 445 2.07e-40 151
Msa0702620 AT1G55940.1 26.824 425 293 12 34 446 45 463 2.16e-40 151
Msa0702620 AT4G15300.3 26.291 426 290 11 34 450 25 435 2.18e-40 151
Msa0702620 AT1G12740.3 26.331 338 241 6 34 369 31 362 1.09e-38 144
Msa0702620 AT5G38970.2 24.806 387 278 8 93 475 6 383 1.72e-38 144
Msa0702620 AT5G38970.4 24.806 387 278 8 93 475 6 383 1.72e-38 144
Msa0702620 AT4G15393.2 26.932 427 285 14 34 450 35 444 5.73e-38 144
Msa0702620 AT4G15396.1 25.527 427 293 11 34 450 35 446 6.94e-38 144
Msa0702620 AT4G15300.1 26.018 442 293 13 34 450 25 457 2.16e-37 143
Msa0702620 AT5G14400.4 29.290 338 222 8 39 369 1 328 5.35e-37 139
Msa0702620 AT4G15396.3 25.416 421 290 10 34 444 35 441 2.44e-36 140
Msa0702620 AT4G36380.2 27.679 336 237 5 34 366 69 401 3.81e-36 139
Msa0702620 AT1G65670.1 25.058 431 289 11 34 452 35 443 4.57e-36 139
Msa0702620 AT5G48000.2 26.144 459 306 12 34 476 35 476 5.15e-36 139
Msa0702620 AT5G48000.4 26.144 459 306 12 34 476 35 476 5.15e-36 139
Msa0702620 AT5G48000.7 26.144 459 306 12 34 476 35 476 5.15e-36 139
Msa0702620 AT5G48000.6 26.144 459 306 12 34 476 35 476 5.15e-36 139
Msa0702620 AT5G48000.5 26.144 459 306 12 34 476 35 476 5.15e-36 139
Msa0702620 AT5G48000.3 26.144 459 306 12 34 476 35 476 5.15e-36 139
Msa0702620 AT5G48000.1 26.144 459 306 12 34 476 76 517 1.45e-35 139
Msa0702620 AT5G38970.3 24.691 405 286 9 6 405 4 394 6.92e-35 135
Msa0702620 AT4G15310.1 25.658 456 315 13 6 450 6 448 8.24e-32 127
Msa0702620 AT1G78490.2 29.049 389 242 14 34 406 35 405 2.03e-31 125
Msa0702620 AT4G15396.2 24.764 424 279 12 34 450 35 425 8.01e-31 124
Msa0702620 AT3G30290.1 24.485 388 268 11 73 450 3 375 1.09e-28 117
Msa0702620 AT4G15393.1 26.053 380 258 12 34 406 35 398 2.24e-25 108
Msa0702620 AT4G15396.4 24.474 380 266 9 34 406 35 400 7.65e-25 106
Msa0702620 AT2G29090.4 24.567 289 205 6 28 314 43 320 8.88e-25 105
Msa0702620 AT2G34490.1 25.600 375 255 12 119 474 121 490 4.36e-22 99.4
Msa0702620 AT4G37320.1 33.654 208 131 4 247 451 257 460 5.12e-22 99.4
Msa0702620 AT3G28740.1 32.407 216 137 4 258 472 278 485 1.20e-21 98.2
Msa0702620 AT1G31800.1 30.526 190 122 3 268 451 357 542 1.59e-21 98.2
Msa0702620 AT1G11680.1 22.622 473 340 11 4 463 12 471 5.79e-21 95.9
Msa0702620 AT2G46960.1 29.496 278 170 10 215 475 132 400 1.31e-20 94.4
Msa0702620 AT2G46960.2 29.496 278 170 10 215 475 248 516 3.29e-20 94.0
Msa0702620 AT4G15393.3 23.545 378 237 10 34 406 35 365 8.30e-20 91.3
Msa0702620 AT5G52400.1 28.626 262 166 10 224 475 268 518 9.31e-20 92.4
Msa0702620 AT4G37330.1 31.280 211 138 4 247 454 254 460 2.71e-19 90.9
Msa0702620 AT1G66540.2 30.374 214 139 5 247 455 84 292 7.29e-19 87.8
Msa0702620 AT3G44970.2 27.160 324 204 11 34 342 35 341 8.62e-19 88.2
Msa0702620 AT4G37400.1 28.750 240 155 5 219 451 231 461 9.87e-19 89.4
Msa0702620 AT3G56630.1 29.167 240 148 8 250 474 264 496 1.09e-18 89.0
Msa0702620 AT1G66540.1 30.374 214 139 5 247 455 143 351 1.10e-18 88.2
Msa0702620 AT3G53130.1 26.190 252 159 7 221 455 275 516 1.45e-18 89.0
Msa0702620 AT3G14630.1 28.926 242 160 6 216 450 245 481 2.03e-18 88.2
Msa0702620 AT4G37410.1 27.848 237 159 5 219 451 233 461 2.71e-18 87.8
Msa0702620 AT3G14630.2 28.926 242 160 6 216 450 300 536 2.79e-18 88.2
Msa0702620 AT2G34500.1 22.432 370 269 9 119 474 120 485 3.11e-18 87.8
Msa0702620 AT4G37370.1 30.097 206 137 4 247 449 256 457 3.72e-18 87.4
Msa0702620 AT2G28850.1 23.418 474 318 14 28 474 31 486 3.91e-18 87.4
Msa0702620 AT2G28860.1 23.219 379 255 12 119 474 121 486 5.50e-18 87.0
Msa0702620 AT2G26710.1 24.742 388 251 13 112 471 136 510 5.81e-18 87.0
Msa0702620 AT5G24910.1 27.622 286 168 12 212 473 259 529 7.27e-18 86.7
Msa0702620 AT4G37360.1 30.151 199 134 3 258 455 270 464 7.36e-18 86.7
Msa0702620 AT3G14640.1 24.110 365 238 11 114 450 134 487 8.86e-18 86.3
Msa0702620 AT3G14640.2 24.110 365 238 11 114 450 156 509 1.03e-17 86.3
Msa0702620 AT5G24900.2 29.126 206 128 6 278 473 210 407 1.36e-17 85.1
Msa0702620 AT3G14660.1 25.479 365 231 9 114 450 134 485 1.77e-17 85.5
Msa0702620 AT3G14660.2 28.405 257 166 7 204 450 91 339 4.21e-17 83.2
Msa0702620 AT5G24900.1 29.126 206 128 6 278 473 327 524 4.30e-17 84.3
Msa0702620 AT4G37430.1 27.686 242 161 7 219 455 236 468 4.95e-17 84.0
Msa0702620 AT5G57220.1 29.469 207 140 4 247 451 253 455 7.73e-17 83.6
Msa0702620 AT2G46950.1 27.536 276 174 9 217 475 303 569 8.35e-17 83.6
Msa0702620 AT1G34540.1 27.830 212 136 7 247 446 260 466 8.49e-17 83.2
Msa0702620 AT3G14690.1 23.990 421 275 16 63 450 77 485 9.19e-17 83.2
Msa0702620 AT5G25120.1 31.527 203 121 7 285 475 294 490 9.31e-17 83.2
Msa0702620 AT3G14690.2 23.990 421 275 16 63 450 112 520 1.11e-16 83.2
Msa0702620 AT4G37310.1 29.167 216 136 6 247 449 259 470 1.17e-16 82.8
Msa0702620 AT2G45510.1 26.360 239 163 4 238 463 255 493 1.19e-16 82.8
Msa0702620 AT5G25130.1 31.527 203 121 7 285 475 294 490 1.37e-16 82.8
Msa0702620 AT1G64930.1 30.928 194 123 5 266 451 290 480 1.41e-16 82.8
Msa0702620 AT4G13770.1 23.983 467 320 15 12 450 8 467 2.14e-16 82.0
Msa0702620 AT4G13290.1 28.125 288 179 10 187 460 195 468 2.51e-16 81.6
Msa0702620 AT1G64940.1 30.172 232 145 8 232 451 254 480 2.98e-16 81.6
Msa0702620 AT1G75130.1 26.394 269 181 8 210 468 234 495 3.03e-16 81.6
Msa0702620 AT2G44890.1 25.105 239 166 4 238 463 255 493 4.26e-16 81.3
Msa0702620 AT4G13310.1 29.464 224 141 7 248 460 258 475 4.67e-16 80.9
Msa0702620 AT3G14610.1 23.056 360 247 12 114 450 133 485 5.06e-16 80.9
Msa0702620 AT3G14680.1 28.016 257 169 8 203 450 236 485 6.67e-16 80.5
Msa0702620 AT5G25140.1 31.959 194 120 5 282 469 291 478 1.05e-15 79.7
Msa0702620 AT5G58860.1 27.857 280 171 11 221 475 234 507 1.09e-15 79.7
Msa0702620 AT4G37340.1 29.187 209 141 5 249 455 261 464 1.36e-15 79.7
Msa0702620 AT1G50520.1 27.004 237 150 6 226 448 253 480 2.79e-15 78.6
Msa0702620 AT5G67310.1 27.888 251 169 7 201 449 229 469 3.27e-15 78.6
Msa0702620 AT3G14620.1 27.206 272 172 11 217 471 248 510 3.74e-15 78.2
Msa0702620 AT5G06905.1 26.122 245 155 7 236 458 247 487 5.23e-15 77.8
Msa0702620 AT5G36220.2 27.692 195 136 3 258 451 130 320 2.39e-14 74.7
Msa0702620 AT5G36220.1 27.692 195 136 3 258 451 276 466 3.71e-14 75.1
Msa0702620 AT3G26230.1 31.217 189 117 6 278 460 294 475 4.13e-14 75.1
Msa0702620 AT4G15110.1 25.806 217 124 5 267 450 338 550 5.56e-14 74.7
Msa0702620 AT3G20935.1 27.477 222 143 5 238 450 93 305 6.89e-14 73.2
Msa0702620 AT3G20140.1 29.825 171 112 3 285 450 308 475 6.92e-14 74.3
Msa0702620 AT3G61040.1 28.151 238 152 6 233 454 237 471 7.48e-14 73.9
Msa0702620 AT3G32047.1 28.333 240 150 6 232 455 252 485 8.33e-14 73.9
Msa0702620 AT1G11600.1 21.895 475 295 18 32 454 33 483 9.35e-14 73.9
Msa0702620 AT5G25180.1 28.270 237 147 7 256 475 260 490 1.38e-13 73.2
Msa0702620 AT3G26300.1 30.233 172 110 4 285 450 298 465 1.53e-13 73.2
Msa0702620 AT2G45550.1 27.500 200 137 3 256 450 279 475 1.96e-13 72.8
Msa0702620 AT3G14650.1 22.865 363 243 11 114 450 134 485 2.26e-13 72.8
Msa0702620 AT2G26170.2 28.309 272 166 11 218 472 175 434 2.69e-13 72.0
Msa0702620 AT2G26170.1 28.309 272 166 11 218 472 258 517 2.70e-13 72.4
Msa0702620 AT2G23220.1 25.962 208 147 4 247 451 272 475 3.35e-13 72.0
Msa0702620 AT2G12190.1 29.437 231 146 7 233 451 256 481 3.70e-13 72.0
Msa0702620 AT3G20120.2 28.000 175 114 3 285 450 171 342 4.92e-13 70.9
Msa0702620 AT3G20120.3 28.000 175 114 3 285 450 171 342 4.92e-13 70.9
Msa0702620 AT3G20120.1 28.000 175 114 3 285 450 171 342 4.92e-13 70.9
Msa0702620 AT5G38450.1 26.570 207 134 7 278 475 318 515 5.58e-13 71.6
Msa0702620 AT3G20120.4 28.000 175 114 3 285 450 307 478 5.89e-13 71.2
Msa0702620 AT4G27710.1 26.846 298 185 12 197 475 233 516 6.43e-13 71.2
Msa0702620 AT1G67110.1 25.180 278 181 8 215 475 242 509 7.51e-13 70.9
Msa0702620 AT4G12330.1 25.352 213 148 6 242 448 272 479 8.61e-13 70.9
Msa0702620 AT3G26310.1 30.168 179 114 5 279 450 290 464 9.63e-13 70.5
Msa0702620 AT2G23190.1 26.068 234 162 6 220 451 280 504 1.10e-12 70.5
Msa0702620 AT1G33730.1 27.751 209 142 4 247 450 135 339 1.27e-12 69.7
Msa0702620 AT1G33730.2 27.751 209 142 4 247 450 135 339 1.27e-12 69.7
Msa0702620 AT3G48280.1 29.958 237 147 8 230 455 231 459 1.88e-12 69.7
Msa0702620 AT1G64950.1 29.258 229 147 7 233 451 256 479 2.30e-12 69.3
Msa0702620 AT5G23190.1 24.696 247 167 6 221 451 271 514 2.44e-12 69.7
Msa0702620 AT5G04330.1 25.912 274 172 10 198 454 215 474 3.68e-12 68.9
Msa0702620 AT1G50560.1 25.833 240 158 7 256 478 281 517 4.18e-12 68.6
Msa0702620 AT4G36220.1 25.000 212 140 4 248 454 288 485 5.76e-12 68.2
Msa0702620 AT3G26180.2 26.818 220 142 6 247 454 125 337 8.54e-12 67.0
Msa0702620 AT1G13150.1 20.930 473 309 16 31 451 32 491 9.01e-12 67.8
Msa0702620 AT2G45580.2 27.523 218 136 7 249 453 120 328 1.40e-11 66.2
Msa0702620 AT3G26180.1 26.818 220 142 6 247 454 259 471 1.47e-11 67.0
Msa0702620 AT4G15350.1 27.429 175 115 4 285 450 302 473 2.54e-11 66.2
Msa0702620 AT2G45580.1 27.523 218 136 7 249 453 274 482 3.09e-11 65.9
Msa0702620 AT1G13140.1 26.437 174 116 4 285 446 320 493 3.31e-11 65.9
Msa0702620 AT1G74540.1 27.528 178 121 4 285 457 289 463 3.63e-11 65.9
Msa0702620 AT3G26290.1 27.536 207 136 5 282 478 295 497 3.85e-11 65.5
Msa0702620 AT1G13140.2 26.437 174 116 4 285 446 294 467 3.91e-11 65.5
Msa0702620 AT3G26290.2 27.536 207 136 5 282 478 308 510 4.01e-11 65.5
Msa0702620 AT3G20950.1 28.000 175 114 3 285 450 312 483 4.33e-11 65.5
Msa0702620 AT2G27010.1 26.286 175 117 3 285 450 284 455 4.99e-11 65.1
Msa0702620 AT2G45570.1 25.600 250 170 6 211 450 233 476 6.27e-11 65.1
Msa0702620 AT1G69500.1 23.588 301 169 9 224 474 232 521 7.05e-11 64.7
Msa0702620 AT3G48520.1 23.704 270 173 10 223 474 243 497 8.98e-11 64.3
Msa0702620 AT3G26210.1 24.887 221 156 6 257 471 271 487 9.80e-11 64.3

Find 113 sgRNAs with CRISPR-Local

Find 185 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAGAAATTACTTGCCAAATA+TGG 0.212343 4_4:-74311783 Msa0702620:CDS
TGATTGTAGTTGAAAGTTTA+AGG 0.215714 4_4:-74312332 Msa0702620:five_prime_UTR
CTTTCCAATGTGTGTTTATA+TGG 0.264138 4_4:+74311744 None:intergenic
AAGTAATTTCTAAGTGTTTC+TGG 0.266492 4_4:+74311794 None:intergenic
TGAGCAATTCTATCCATATT+TGG 0.268527 4_4:+74311770 None:intergenic
TTATTATTCATCATAGCTTA+TGG 0.273742 4_4:-74312233 Msa0702620:exon
AGCATAGGTAAAATCCTTTA+TGG 0.275374 4_4:+74310157 None:intergenic
GAAAGGTTTGTTACATGAAT+AGG 0.281392 4_4:+74310886 None:intergenic
GTGGGACTATTCTGCAGTTT+TGG 0.281789 4_4:+74309458 None:intergenic
GAAGAAAAGGAAAGTGGATT+TGG 0.289451 4_4:-74310743 Msa0702620:CDS
AATGAATAAATAACCAAATA+TGG 0.307769 4_4:-74309485 Msa0702620:three_prime_UTR
AAGGTTGTCTCTTGTTAATA+AGG 0.311020 4_4:-74311867 Msa0702620:CDS
CCAAATGGAACATATGAATA+AGG 0.317996 4_4:+74309881 None:intergenic
GGAAATCCTAAGGTTCCTTT+AGG 0.319592 4_4:+74312112 None:intergenic
TAACAAGTAAATGTGATAAA+AGG 0.325476 4_4:+74310692 None:intergenic
GCCTTATGAAACCTTGTTCC+AGG 0.328634 4_4:+74310811 None:intergenic
ACCTTAGGATTTCCATTTGT+TGG 0.331369 4_4:-74312103 Msa0702620:CDS
CCTATGCTAGAGCCTGAAAA+TGG 0.340307 4_4:-74309734 Msa0702620:CDS
CCTTATTCATATGTTCCATT+TGG 0.347733 4_4:-74309881 Msa0702620:CDS
TCTTGCCCCAAACACATTCT+AGG 0.349577 4_4:+74309851 None:intergenic
AGGAGGACCTAGAATGTGTT+TGG 0.349634 4_4:-74309858 Msa0702620:CDS
TGAAAGCTACAAATGAAATA+AGG 0.357447 4_4:-74310786 Msa0702620:CDS
GGCTTCGCAATCAACTTTCC+TGG 0.366680 4_4:-74310829 Msa0702620:CDS
AATTGCAAGGAGGATTTGTT+AGG 0.369231 4_4:+74312309 None:intergenic
AATGTGTATAGCTGTATTAT+AGG 0.370831 4_4:+74310946 None:intergenic
ATCTTGAGGGAAAGCAAATA+AGG 0.372337 4_4:-74312054 Msa0702620:CDS
TCATTGGTTATGAAGTATCT+TGG 0.378005 4_4:-74310571 Msa0702620:CDS
AAAGGTTTGTTACATGAATA+GGG 0.384152 4_4:+74310887 None:intergenic
CGCTTTCAGAGATGCCATAA+AGG 0.396578 4_4:-74310171 Msa0702620:CDS
GAATTTCTAAAAGGGATCAT+TGG 0.400489 4_4:-74310850 Msa0702620:CDS
GGAGGACCTAGAATGTGTTT+GGG 0.409965 4_4:-74309857 Msa0702620:CDS
TCAAAGGTTTCTCCAACAAA+TGG 0.410321 4_4:+74312091 None:intergenic
AAAACAAGAATGTTCAAGTA+TGG 0.410480 4_4:-74311916 Msa0702620:CDS
TCCTGGAACAAGGTTTCATA+AGG 0.411433 4_4:-74310812 Msa0702620:CDS
AATCTTCCTAAAGGAACCTT+AGG 0.418148 4_4:-74312118 Msa0702620:CDS
CGTATTATTATCGTGTGTAA+TGG 0.421695 4_4:+74309687 None:intergenic
TCCAGAAAATGAAATACTCT+TGG 0.427830 4_4:-74310238 Msa0702620:CDS
TGGGAAGGTTGAAGTCTGAT+TGG 0.431331 4_4:+74309707 None:intergenic
GTATTATTATCGTGTGTAAT+GGG 0.442260 4_4:+74309688 None:intergenic
TATTCATATGTTCCATTTGG+AGG 0.446643 4_4:-74309878 Msa0702620:CDS
ACTCCCCTGCCTCTTTCCCT+TGG 0.450901 4_4:+74310279 None:intergenic
TTCTAGATCAGTACTATCAT+TGG 0.451944 4_4:-74310587 Msa0702620:CDS
TTAAAATGATTATGAAGAAA+AGG 0.452233 4_4:-74310756 Msa0702620:CDS
TTTCTAAAAGCTAATCTTGA+GGG 0.459062 4_4:-74312067 Msa0702620:CDS
TTTGATGCTTCAAGGTTTGA+AGG 0.459869 4_4:-74309917 Msa0702620:CDS
TCTCTGAAAGCGCCACCGAC+AGG 0.468430 4_4:+74310182 None:intergenic
GCATCTGCTTCCACAAGTGT+TGG 0.473974 4_4:-74309610 Msa0702620:three_prime_UTR
ATGAAGCAAAAGCAACTAGA+AGG 0.475495 4_4:-74311838 Msa0702620:CDS
TCAGGATTTGAAAACAGTGT+TGG 0.475875 4_4:+74309944 None:intergenic
CTGAGGCTGTCCCCGCCTGT+CGG 0.476524 4_4:-74310197 Msa0702620:CDS
TGAAATTAGCCAAGGGAAAG+AGG 0.480337 4_4:-74310288 Msa0702620:CDS
CAATCAACTTTCCTGGAACA+AGG 0.481445 4_4:-74310822 Msa0702620:CDS
TGAAAGCGCCACCGACAGGC+GGG 0.482966 4_4:+74310186 None:intergenic
TTGTCTCTTGTTAATAAGGT+TGG 0.485068 4_4:-74311863 Msa0702620:CDS
TCATACTTGAACTTCTCATC+AGG 0.487310 4_4:+74309758 None:intergenic
ACTCCTTCACATATGTGGTT+AGG 0.495089 4_4:+74312354 None:intergenic
GCTCAGTGAAGAAGTTGTTA+AGG 0.495990 4_4:-74311886 Msa0702620:CDS
ATTCTAGGTCCTCCTCCAAA+TGG 0.498202 4_4:+74309866 None:intergenic
ATTAGCCAAGGGAAAGAGGC+AGG 0.499684 4_4:-74310284 Msa0702620:CDS
GGTGTTTATGACAGTTGCAT+TGG 0.503191 4_4:-74309991 Msa0702620:intron
ATTCTTCAAAATATGATGAA+AGG 0.503401 4_4:+74310869 None:intergenic
GGCAGGGGAGTTATTGCAAT+GGG 0.509314 4_4:-74310267 Msa0702620:CDS
AGGCTGTCCCCGCCTGTCGG+TGG 0.509526 4_4:-74310194 Msa0702620:CDS
TCCAACAAATGGAAATCCTA+AGG 0.513579 4_4:+74312102 None:intergenic
AGTGGATTTGGATGAAAAGA+AGG 0.515529 4_4:-74310731 Msa0702620:CDS
GATTATGAAGAAAAGGAAAG+TGG 0.517025 4_4:-74310749 Msa0702620:CDS
TTGTGATGAAATGCAAAAGA+AGG 0.522587 4_4:+74312164 None:intergenic
GCTTCAAGGTTTGAAGGAGA+AGG 0.523358 4_4:-74309911 Msa0702620:CDS
TAGCCAAGGGAAAGAGGCAG+GGG 0.528348 4_4:-74310282 Msa0702620:CDS
GGAACATATGAATAAGGTGT+TGG 0.529659 4_4:+74309887 None:intergenic
TCATATGTTCCATTTGGAGG+AGG 0.534499 4_4:-74309875 Msa0702620:CDS
GTTTATGAACAAGTGTTGAA+AGG 0.536878 4_4:-74310535 Msa0702620:intron
CAATCACTCCTTCACATATG+TGG 0.541508 4_4:+74312349 None:intergenic
AGAAAGCTTAATCTTCCTAA+AGG 0.544980 4_4:-74312127 Msa0702620:CDS
AACACTTGTTCATAAACTTG+AGG 0.550446 4_4:+74310541 None:intergenic
TATTATCGTGTGTAATGGGA+AGG 0.553423 4_4:+74309692 None:intergenic
AATAAGAACTTGTTCCCAGC+TGG 0.553588 4_4:+74311947 None:intergenic
CTGAAAGCGCCACCGACAGG+CGG 0.557611 4_4:+74310185 None:intergenic
CTTCAAGGTTTGAAGGAGAA+GGG 0.558408 4_4:-74309910 Msa0702620:CDS
GAAAGCGCCACCGACAGGCG+GGG 0.559653 4_4:+74310187 None:intergenic
CTTGTTACACCTGATACAAG+TGG 0.559763 4_4:-74310676 Msa0702620:CDS
ATTATAACATCCCTAGTGGA+TGG 0.567013 4_4:-74310133 Msa0702620:CDS
AACAACTTCTTCACTGAGCT+AGG 0.567202 4_4:+74311890 None:intergenic
GAACAACTTGAAATTAGCCA+AGG 0.578712 4_4:-74310296 Msa0702620:CDS
GTTTGGGGCAAGAGTTCGCT+CGG 0.580677 4_4:-74309841 Msa0702620:CDS
TATTGTGAAACGTTTCAAGT+GGG 0.582770 4_4:-74309792 Msa0702620:CDS
ATGTTGCTTCTGAAGTTCTG+AGG 0.584534 4_4:-74310214 Msa0702620:CDS
TCTTTAGTGAAGCTTTGTCA+TGG 0.586406 4_4:-74309573 Msa0702620:three_prime_UTR
ATTTCTAAAAGCTAATCTTG+AGG 0.586722 4_4:-74312068 Msa0702620:CDS
TAACATCCCTAGTGGATGGA+AGG 0.587209 4_4:-74310129 Msa0702620:intron
TATCTTGAAACCAACACTTG+TGG 0.599132 4_4:+74309600 None:intergenic
AAACATACCTTCCATCCACT+AGG 0.600198 4_4:+74310122 None:intergenic
AGCACCATATAAACACACAT+TGG 0.601255 4_4:-74311748 Msa0702620:CDS
ACAAAGAGAGCCAAAACTGT+TGG 0.605657 4_4:+74312187 None:intergenic
ACAAGAATGTTCAAGTATGG+TGG 0.606348 4_4:-74311913 Msa0702620:CDS
AGGGATGTTATAATCAGCAT+AGG 0.611512 4_4:+74310142 None:intergenic
CATATAAACACACATTGGAA+AGG 0.612746 4_4:-74311743 Msa0702620:intron
GTACTGATCTAGAAGTGTCA+TGG 0.614010 4_4:+74310596 None:intergenic
ACTGAACACATATAATTGCA+AGG 0.616038 4_4:+74312296 None:intergenic
AACATACCTTCCATCCACTA+GGG 0.616641 4_4:+74310123 None:intergenic
ATATTGTGAAACGTTTCAAG+TGG 0.621656 4_4:-74309793 Msa0702620:CDS
TTACACCTGATACAAGTGGA+AGG 0.625910 4_4:-74310672 Msa0702620:CDS
TTATTCATCATAGCTTATGG+AGG 0.631091 4_4:-74312230 Msa0702620:exon
GAACACACATACAACACACA+TGG 0.635289 4_4:-74309969 Msa0702620:CDS
TTAGCCAAGGGAAAGAGGCA+GGG 0.642507 4_4:-74310283 Msa0702620:CDS
AACAACTTGAAATTAGCCAA+GGG 0.643857 4_4:-74310295 Msa0702620:CDS
AGGCAGGGGAGTTATTGCAA+TGG 0.650161 4_4:-74310268 Msa0702620:CDS
GTACCTAACCACATATGTGA+AGG 0.653382 4_4:-74312357 Msa0702620:five_prime_UTR
GCTGATTATAACATCCCTAG+TGG 0.655417 4_4:-74310137 Msa0702620:CDS
TGTGATAAAAGGTCTTGTGT+AGG 0.663837 4_4:+74310703 None:intergenic
AGGGGAGTTATTGCAATGGG+AGG 0.678989 4_4:-74310264 Msa0702620:CDS
GAGGACCTAGAATGTGTTTG+GGG 0.695156 4_4:-74309856 Msa0702620:CDS
GAACACATATAATTGCAAGG+AGG 0.765052 4_4:+74312299 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCAGATATTTTTTTTTTTTT+TGG - chr4_4:74309576-74309595 Msa0702620:three_prime_UTR 10.0%
!!! CAGATATTTTTTTTTTTTTT+GGG - chr4_4:74309577-74309596 Msa0702620:three_prime_UTR 10.0%
!! TTTGATTAAATTTATGAAAA+TGG - chr4_4:74310466-74310485 Msa0702620:intron 10.0%
!! TTTATATATTAGCATATTAT+TGG - chr4_4:74310552-74310571 Msa0702620:CDS 10.0%
!!! TATTTTGAAGAATTTCTAAA+AGG - chr4_4:74311122-74311141 Msa0702620:intron 15.0%
!!! ATTTTGAAGAATTTCTAAAA+GGG - chr4_4:74311123-74311142 Msa0702620:intron 15.0%
!! TTAAAATGATTATGAAGAAA+AGG - chr4_4:74311225-74311244 Msa0702620:intron 15.0%
!! TTTGAACATTAATTTCAATA+TGG - chr4_4:74311483-74311502 Msa0702620:intron 15.0%
!! AATGAATAAATAACCAAATA+TGG - chr4_4:74312496-74312515 Msa0702620:five_prime_UTR 15.0%
!!! CTTTGATTTGATAGTAAAAA+AGG + chr4_4:74309487-74309506 None:intergenic 20.0%
!! TTATTATTCATCATAGCTTA+TGG - chr4_4:74309748-74309767 Msa0702620:CDS 20.0%
!!! ATTAGCTTTTAGAAATTCAA+AGG + chr4_4:74309909-74309928 None:intergenic 20.0%
!! AAATTGCAAAAAATAAGAAC+CGG + chr4_4:74310686-74310705 None:intergenic 20.0%
!!! GCTAATTAACACTTTAAAAA+TGG + chr4_4:74310799-74310818 None:intergenic 20.0%
!!! TAAAGTTTGACTTTCTTTTA+GGG + chr4_4:74310890-74310909 None:intergenic 20.0%
!!! ATAAAGTTTGACTTTCTTTT+AGG + chr4_4:74310891-74310910 None:intergenic 20.0%
!! AAACTTTATTACACATTCAT+CGG - chr4_4:74310902-74310921 Msa0702620:CDS 20.0%
!!! ATTTTTGACAAACATCTATA+TGG + chr4_4:74310939-74310958 None:intergenic 20.0%
!!! TGTTAATTTACACTTTTGAA+GGG - chr4_4:74310991-74311010 Msa0702620:intron 20.0%
!! ATTCTTCAAAATATGATGAA+AGG + chr4_4:74311115-74311134 None:intergenic 20.0%
!! TAACAAGTAAATGTGATAAA+AGG + chr4_4:74311292-74311311 None:intergenic 20.0%
!! TATAAGAAAAAAAAGCAACA+TGG + chr4_4:74311607-74311626 None:intergenic 20.0%
!!! CTTTTATGAAAAACTTGATT+AGG - chr4_4:74311627-74311646 Msa0702620:intron 20.0%
! TGATTGTAGTTGAAAGTTTA+AGG - chr4_4:74309649-74309668 Msa0702620:three_prime_UTR 25.0%
!!! AATAACTAGAGCTTTGTTTT+TGG + chr4_4:74309729-74309748 None:intergenic 25.0%
!! ATTTCTAAAAGCTAATCTTG+AGG - chr4_4:74309913-74309932 Msa0702620:CDS 25.0%
!! TTTCTAAAAGCTAATCTTGA+GGG - chr4_4:74309914-74309933 Msa0702620:CDS 25.0%
! AAAACAAGAATGTTCAAGTA+TGG - chr4_4:74310065-74310084 Msa0702620:intron 25.0%
! AAGTAATTTCTAAGTGTTTC+TGG + chr4_4:74310190-74310209 None:intergenic 25.0%
! TAGAAATTACTTGCCAAATA+TGG - chr4_4:74310198-74310217 Msa0702620:CDS 25.0%
!! CTTTGTTTATAAACACACAT+TGG - chr4_4:74310345-74310364 Msa0702620:intron 25.0%
! TTTATAAACACACATTGGAA+AGG - chr4_4:74310350-74310369 Msa0702620:intron 25.0%
! AAAAACATGCTAGAATCATA+TGG + chr4_4:74310719-74310738 None:intergenic 25.0%
!! GTGTTAATTTACACTTTTGA+AGG - chr4_4:74310990-74311009 Msa0702620:intron 25.0%
! AATGTGTATAGCTGTATTAT+AGG + chr4_4:74311038-74311057 None:intergenic 25.0%
!!! TTGTTGCTTATTTTTAAGCA+TGG - chr4_4:74311067-74311086 Msa0702620:intron 25.0%
!!! AAAGGTTTGTTACATGAATA+GGG + chr4_4:74311097-74311116 None:intergenic 25.0%
! TGAAAGCTACAAATGAAATA+AGG - chr4_4:74311195-74311214 Msa0702620:intron 25.0%
!! ATACTATTACTTCTTTTTGC+TGG - chr4_4:74311362-74311381 Msa0702620:intron 25.0%
!!! TATTCTAAAGCATGTATGTA+TGG - chr4_4:74311969-74311988 Msa0702620:CDS 25.0%
! GTATTATTATCGTGTGTAAT+GGG + chr4_4:74312296-74312315 None:intergenic 25.0%
ACTGAACACATATAATTGCA+AGG + chr4_4:74309688-74309707 None:intergenic 30.0%
!!! TAGAGCTTTGTTTTTGGAAT+TGG + chr4_4:74309723-74309742 None:intergenic 30.0%
TTATTCATCATAGCTTATGG+AGG - chr4_4:74309751-74309770 Msa0702620:CDS 30.0%
!! CATAGTTTTACCAACAGTTT+TGG - chr4_4:74309784-74309803 Msa0702620:CDS 30.0%
TTGTGATGAAATGCAAAAGA+AGG + chr4_4:74309820-74309839 None:intergenic 30.0%
AGAAAGCTTAATCTTCCTAA+AGG - chr4_4:74309854-74309873 Msa0702620:CDS 30.0%
!! GTTTTCAAGACTTCAATGTT+TGG - chr4_4:74309986-74310005 Msa0702620:intron 30.0%
AAGGTTGTCTCTTGTTAATA+AGG - chr4_4:74310114-74310133 Msa0702620:intron 30.0%
TTGTCTCTTGTTAATAAGGT+TGG - chr4_4:74310118-74310137 Msa0702620:intron 30.0%
TGAGCAATTCTATCCATATT+TGG + chr4_4:74310214-74310233 None:intergenic 30.0%
CTTTCCAATGTGTGTTTATA+TGG + chr4_4:74310240-74310259 None:intergenic 30.0%
CATATAAACACACATTGGAA+AGG - chr4_4:74310238-74310257 Msa0702620:CDS 30.0%
CTATCATGAAATGAAATGCA+AGG + chr4_4:74310311-74310330 None:intergenic 30.0%
CTATCATGAAATGAAATGCA+AGG + chr4_4:74310311-74310330 None:intergenic 30.0%
! AAATTTTCCTCAACAACAAC+TGG + chr4_4:74310493-74310512 None:intergenic 30.0%
AAAATAAGAACCGGTTGAAT+TGG + chr4_4:74310677-74310696 None:intergenic 30.0%
TTTGAACAGATTGAACCAAT+TGG - chr4_4:74310736-74310755 Msa0702620:CDS 30.0%
CCATTTAGACATTTAAGTCA+CGG + chr4_4:74310763-74310782 None:intergenic 30.0%
TAATTAGCAGATAGTGAGAT+AGG - chr4_4:74310811-74310830 Msa0702620:CDS 30.0%
!! AATTTACACTTTTGAAGGGA+AGG - chr4_4:74310995-74311014 Msa0702620:intron 30.0%
!! GAAAGGTTTGTTACATGAAT+AGG + chr4_4:74311098-74311117 None:intergenic 30.0%
! GAATTTCTAAAAGGGATCAT+TGG - chr4_4:74311131-74311150 Msa0702620:intron 30.0%
GATTATGAAGAAAAGGAAAG+TGG - chr4_4:74311232-74311251 Msa0702620:intron 30.0%
TTCTAGATCAGTACTATCAT+TGG - chr4_4:74311394-74311413 Msa0702620:intron 30.0%
! TCATTGGTTATGAAGTATCT+TGG - chr4_4:74311410-74311429 Msa0702620:intron 30.0%
AACACTTGTTCATAAACTTG+AGG + chr4_4:74311443-74311462 None:intergenic 30.0%
!! GTTTATGAACAAGTGTTGAA+AGG - chr4_4:74311446-74311465 Msa0702620:intron 30.0%
AACAACTTGAAATTAGCCAA+GGG - chr4_4:74311686-74311705 Msa0702620:intron 30.0%
TCCAGAAAATGAAATACTCT+TGG - chr4_4:74311743-74311762 Msa0702620:intron 30.0%
!!! TCCAAGAGTATTTCATTTTC+TGG + chr4_4:74311747-74311766 None:intergenic 30.0%
AGCATAGGTAAAATCCTTTA+TGG + chr4_4:74311827-74311846 None:intergenic 30.0%
!! CTTGAAGCATCAAATTTTTC+AGG + chr4_4:74312058-74312077 None:intergenic 30.0%
CTGAAAAATTTGATGCTTCA+AGG - chr4_4:74312056-74312075 Msa0702620:CDS 30.0%
CCAAATGGAACATATGAATA+AGG + chr4_4:74312103-74312122 None:intergenic 30.0%
CCTTATTCATATGTTCCATT+TGG - chr4_4:74312100-74312119 Msa0702620:CDS 30.0%
TATTCATATGTTCCATTTGG+AGG - chr4_4:74312103-74312122 Msa0702620:CDS 30.0%
ATATTGTGAAACGTTTCAAG+TGG - chr4_4:74312188-74312207 Msa0702620:CDS 30.0%
! TATTGTGAAACGTTTCAAGT+GGG - chr4_4:74312189-74312208 Msa0702620:CDS 30.0%
CGTATTATTATCGTGTGTAA+TGG + chr4_4:74312297-74312316 None:intergenic 30.0%
! AATTGCAAGGAGGATTTGTT+AGG + chr4_4:74309675-74309694 None:intergenic 35.0%
GAACACATATAATTGCAAGG+AGG + chr4_4:74309685-74309704 None:intergenic 35.0%
AATCTTCCTAAAGGAACCTT+AGG - chr4_4:74309863-74309882 Msa0702620:CDS 35.0%
ACCTTAGGATTTCCATTTGT+TGG - chr4_4:74309878-74309897 Msa0702620:CDS 35.0%
TCCAACAAATGGAAATCCTA+AGG + chr4_4:74309882-74309901 None:intergenic 35.0%
TCAAAGGTTTCTCCAACAAA+TGG + chr4_4:74309893-74309912 None:intergenic 35.0%
ATCTTGAGGGAAAGCAAATA+AGG - chr4_4:74309927-74309946 Msa0702620:CDS 35.0%
! GAGAATATTGCTGTGTTTTG+TGG - chr4_4:74310010-74310029 Msa0702620:intron 35.0%
ACAAGAATGTTCAAGTATGG+TGG - chr4_4:74310068-74310087 Msa0702620:intron 35.0%
ATGAAGCAAAAGCAACTAGA+AGG - chr4_4:74310143-74310162 Msa0702620:CDS 35.0%
AGCACCATATAAACACACAT+TGG - chr4_4:74310233-74310252 Msa0702620:CDS 35.0%
ATCAATCAGTTCCTATGTGT+AGG - chr4_4:74310275-74310294 Msa0702620:CDS 35.0%
ATCAATCAGTTCCTATGTGT+AGG - chr4_4:74310275-74310294 Msa0702620:CDS 35.0%
CTCTCTCTAACATGATTGAA+AGG + chr4_4:74310523-74310542 None:intergenic 35.0%
CCGTGACTTAAATGTCTAAA+TGG - chr4_4:74310760-74310779 Msa0702620:CDS 35.0%
! GAAGAAAAGGAAAGTGGATT+TGG - chr4_4:74311238-74311257 Msa0702620:intron 35.0%
! AGTGGATTTGGATGAAAAGA+AGG - chr4_4:74311250-74311269 Msa0702620:intron 35.0%
! TGTGATAAAAGGTCTTGTGT+AGG + chr4_4:74311281-74311300 None:intergenic 35.0%
AAAAACCTTCCACTTGTATC+AGG + chr4_4:74311317-74311336 None:intergenic 35.0%
! TGGAAGGTTTTTGAATGAAG+TGG - chr4_4:74311325-74311344 Msa0702620:intron 35.0%
GAACAACTTGAAATTAGCCA+AGG - chr4_4:74311685-74311704 Msa0702620:intron 35.0%
AGGGATGTTATAATCAGCAT+AGG + chr4_4:74311842-74311861 None:intergenic 35.0%
ATTATAACATCCCTAGTGGA+TGG - chr4_4:74311848-74311867 Msa0702620:CDS 35.0%
TCAGGATTTGAAAACAGTGT+TGG + chr4_4:74312040-74312059 None:intergenic 35.0%
TTTGATGCTTCAAGGTTTGA+AGG - chr4_4:74312064-74312083 Msa0702620:CDS 35.0%
GGAACATATGAATAAGGTGT+TGG + chr4_4:74312097-74312116 None:intergenic 35.0%
TCATACTTGAACTTCTCATC+AGG + chr4_4:74312226-74312245 None:intergenic 35.0%
! TATTATCGTGTGTAATGGGA+AGG + chr4_4:74312292-74312311 None:intergenic 35.0%
TATCTTGAAACCAACACTTG+TGG + chr4_4:74312384-74312403 None:intergenic 35.0%
! TCTTTAGTGAAGCTTTGTCA+TGG - chr4_4:74312408-74312427 Msa0702620:five_prime_UTR 35.0%
!!! CAGTTTTGGAACACCATATT+TGG + chr4_4:74312512-74312531 None:intergenic 35.0%
GTACCTAACCACATATGTGA+AGG - chr4_4:74309624-74309643 Msa0702620:three_prime_UTR 40.0%
ACTCCTTCACATATGTGGTT+AGG + chr4_4:74309630-74309649 None:intergenic 40.0%
CAATCACTCCTTCACATATG+TGG + chr4_4:74309635-74309654 None:intergenic 40.0%
ACAAAGAGAGCCAAAACTGT+TGG + chr4_4:74309797-74309816 None:intergenic 40.0%
GGAAATCCTAAGGTTCCTTT+AGG + chr4_4:74309872-74309891 None:intergenic 40.0%
! AATAAGAACTTGTTCCCAGC+TGG + chr4_4:74310037-74310056 None:intergenic 40.0%
AACAACTTCTTCACTGAGCT+AGG + chr4_4:74310094-74310113 None:intergenic 40.0%
GCTCAGTGAAGAAGTTGTTA+AGG - chr4_4:74310095-74310114 Msa0702620:intron 40.0%
! AAATGGTCCAGTTGTTGTTG+AGG - chr4_4:74310483-74310502 Msa0702620:intron 40.0%
!! TGATTTCGAGTTGAATTGGC+TGG + chr4_4:74310605-74310624 None:intergenic 40.0%
!! CAGCTGATTTCGAGTTGAAT+TGG + chr4_4:74310609-74310628 None:intergenic 40.0%
CAATTCAACTCGAAATCAGC+TGG - chr4_4:74310607-74310626 Msa0702620:CDS 40.0%
!! TTCGCTTGTTGGTTTGATTC+TGG - chr4_4:74310630-74310649 Msa0702620:CDS 40.0%
! GATTCTGGCTATACTTTAGC+CGG - chr4_4:74310645-74310664 Msa0702620:CDS 40.0%
! ATTCTGGCTATACTTTAGCC+GGG - chr4_4:74310646-74310665 Msa0702620:CDS 40.0%
CATTTAAGTCACGGTCCAAT+TGG + chr4_4:74310754-74310773 None:intergenic 40.0%
CAATCAACTTTCCTGGAACA+AGG - chr4_4:74311159-74311178 Msa0702620:intron 40.0%
TCCTGGAACAAGGTTTCATA+AGG - chr4_4:74311169-74311188 Msa0702620:intron 40.0%
CTTGTTACACCTGATACAAG+TGG - chr4_4:74311305-74311324 Msa0702620:intron 40.0%
TTACACCTGATACAAGTGGA+AGG - chr4_4:74311309-74311328 Msa0702620:intron 40.0%
!! GTACTGATCTAGAAGTGTCA+TGG + chr4_4:74311388-74311407 None:intergenic 40.0%
TGAAATTAGCCAAGGGAAAG+AGG - chr4_4:74311693-74311712 Msa0702620:intron 40.0%
!! ATGTTGCTTCTGAAGTTCTG+AGG - chr4_4:74311767-74311786 Msa0702620:CDS 40.0%
GCTGATTATAACATCCCTAG+TGG - chr4_4:74311844-74311863 Msa0702620:CDS 40.0%
AACATACCTTCCATCCACTA+GGG + chr4_4:74311861-74311880 None:intergenic 40.0%
AAACATACCTTCCATCCACT+AGG + chr4_4:74311862-74311881 None:intergenic 40.0%
GGTGTTTATGACAGTTGCAT+TGG - chr4_4:74311990-74312009 Msa0702620:CDS 40.0%
GAACACACATACAACACACA+TGG - chr4_4:74312012-74312031 Msa0702620:CDS 40.0%
CTTCAAGGTTTGAAGGAGAA+GGG - chr4_4:74312071-74312090 Msa0702620:CDS 40.0%
TCATATGTTCCATTTGGAGG+AGG - chr4_4:74312106-74312125 Msa0702620:CDS 40.0%
! CTGATTGGAAGTCCATTTTC+AGG + chr4_4:74312262-74312281 None:intergenic 40.0%
CAGTTCCTATGTGTAGGACA+AGG - chr4_4:74310281-74310300 Msa0702620:CDS 45.0%
GAACACCTTGTCCTACACAT+AGG + chr4_4:74310289-74310308 None:intergenic 45.0%
CAGTTCCTATGTGTAGGACA+AGG - chr4_4:74310281-74310300 Msa0702620:CDS 45.0%
GAACACCTTGTCCTACACAT+AGG + chr4_4:74310289-74310308 None:intergenic 45.0%
!! AAATCAGCTGGTTCGCTTGT+TGG - chr4_4:74310619-74310638 Msa0702620:CDS 45.0%
GCCTTATGAAACCTTGTTCC+AGG + chr4_4:74311173-74311192 None:intergenic 45.0%
!! AAAACAGTGCAGCTGACTTG+AGG + chr4_4:74311514-74311533 None:intergenic 45.0%
TACTTGAGGTCGGAACACAA+GGG - chr4_4:74311550-74311569 Msa0702620:intron 45.0%
CGCTTTCAGAGATGCCATAA+AGG - chr4_4:74311810-74311829 Msa0702620:CDS 45.0%
! TAACATCCCTAGTGGATGGA+AGG - chr4_4:74311852-74311871 Msa0702620:CDS 45.0%
GCTTCAAGGTTTGAAGGAGA+AGG - chr4_4:74312070-74312089 Msa0702620:CDS 45.0%
ATTCTAGGTCCTCCTCCAAA+TGG + chr4_4:74312118-74312137 None:intergenic 45.0%
AGGAGGACCTAGAATGTGTT+TGG - chr4_4:74312123-74312142 Msa0702620:CDS 45.0%
GGAGGACCTAGAATGTGTTT+GGG - chr4_4:74312124-74312143 Msa0702620:CDS 45.0%
GAGGACCTAGAATGTGTTTG+GGG - chr4_4:74312125-74312144 Msa0702620:CDS 45.0%
TCTTGCCCCAAACACATTCT+AGG + chr4_4:74312133-74312152 None:intergenic 45.0%
!! CCATTTTCAGGCTCTAGCAT+AGG + chr4_4:74312250-74312269 None:intergenic 45.0%
CCTATGCTAGAGCCTGAAAA+TGG - chr4_4:74312247-74312266 Msa0702620:five_prime_UTR 45.0%
TGGGAAGGTTGAAGTCTGAT+TGG + chr4_4:74312277-74312296 None:intergenic 45.0%
! CTGTGTTTTGTGGACCAGCT+GGG - chr4_4:74310020-74310039 Msa0702620:intron 50.0%
! CCGGTTGAATTGGTTCAACC+CGG + chr4_4:74310667-74310686 None:intergenic 50.0%
! CCGGGTTGAACCAATTCAAC+CGG - chr4_4:74310664-74310683 Msa0702620:CDS 50.0%
GGCTTCGCAATCAACTTTCC+TGG - chr4_4:74311152-74311171 Msa0702620:intron 50.0%
CACTGCAACGTACTTGAGGT+CGG - chr4_4:74311540-74311559 Msa0702620:intron 50.0%
GTACTTGAGGTCGGAACACA+AGG - chr4_4:74311549-74311568 Msa0702620:intron 50.0%
ATTAGCCAAGGGAAAGAGGC+AGG - chr4_4:74311697-74311716 Msa0702620:intron 50.0%
TTAGCCAAGGGAAAGAGGCA+GGG - chr4_4:74311698-74311717 Msa0702620:intron 50.0%
AGGCAGGGGAGTTATTGCAA+TGG - chr4_4:74311713-74311732 Msa0702620:intron 50.0%
GGCAGGGGAGTTATTGCAAT+GGG - chr4_4:74311714-74311733 Msa0702620:intron 50.0%
AGGGGAGTTATTGCAATGGG+AGG - chr4_4:74311717-74311736 Msa0702620:intron 50.0%
GCATCTGCTTCCACAAGTGT+TGG - chr4_4:74312371-74312390 Msa0702620:five_prime_UTR 50.0%
! GCTGTGTTTTGTGGACCAGC+TGG - chr4_4:74310019-74310038 Msa0702620:intron 55.0%
!! CAGTGCAGCTGACTTGAGGT+CGG + chr4_4:74311510-74311529 None:intergenic 55.0%
CGTGCACTGCAACGTACTTG+AGG - chr4_4:74311536-74311555 Msa0702620:intron 55.0%
TAGCCAAGGGAAAGAGGCAG+GGG - chr4_4:74311699-74311718 Msa0702620:intron 55.0%
! GTTTGGGGCAAGAGTTCGCT+CGG - chr4_4:74312140-74312159 Msa0702620:CDS 55.0%
ACTCCCCTGCCTCTTTCCCT+TGG + chr4_4:74311705-74311724 None:intergenic 60.0%
!! TCTCTGAAAGCGCCACCGAC+AGG + chr4_4:74311802-74311821 None:intergenic 60.0%
!! TGAAAGCGCCACCGACAGGC+GGG + chr4_4:74311798-74311817 None:intergenic 65.0%
!! CTGAAAGCGCCACCGACAGG+CGG + chr4_4:74311799-74311818 None:intergenic 65.0%
CTGAGGCTGTCCCCGCCTGT+CGG - chr4_4:74311784-74311803 Msa0702620:CDS 70.0%
!! GAAAGCGCCACCGACAGGCG+GGG + chr4_4:74311797-74311816 None:intergenic 70.0%
AGGCTGTCCCCGCCTGTCGG+TGG - chr4_4:74311787-74311806 Msa0702620:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 74309471 74312532 74309471 ID=Msa0702620;Name=Msa0702620
chr4_4 mRNA 74309471 74312532 74309471 ID=Msa0702620-mRNA-1;Parent=Msa0702620;Name=Msa0702620-mRNA-1;_AED=0.06;_eAED=0.06;_QI=296|1|1|1|1|1|4|223|480
chr4_4 exon 74309471 74309999 74309471 ID=Msa0702620-mRNA-1:exon:23129;Parent=Msa0702620-mRNA-1
chr4_4 exon 74310130 74310317 74310130 ID=Msa0702620-mRNA-1:exon:23128;Parent=Msa0702620-mRNA-1
chr4_4 exon 74310536 74310991 74310536 ID=Msa0702620-mRNA-1:exon:23127;Parent=Msa0702620-mRNA-1
chr4_4 exon 74311744 74312532 74311744 ID=Msa0702620-mRNA-1:exon:23126;Parent=Msa0702620-mRNA-1
chr4_4 five_prime_UTR 74312237 74312532 74312237 ID=Msa0702620-mRNA-1:five_prime_utr;Parent=Msa0702620-mRNA-1
chr4_4 CDS 74311744 74312236 74311744 ID=Msa0702620-mRNA-1:cds;Parent=Msa0702620-mRNA-1
chr4_4 CDS 74310536 74310991 74310536 ID=Msa0702620-mRNA-1:cds;Parent=Msa0702620-mRNA-1
chr4_4 CDS 74310130 74310317 74310130 ID=Msa0702620-mRNA-1:cds;Parent=Msa0702620-mRNA-1
chr4_4 CDS 74309694 74309999 74309694 ID=Msa0702620-mRNA-1:cds;Parent=Msa0702620-mRNA-1
chr4_4 three_prime_UTR 74309471 74309693 74309471 ID=Msa0702620-mRNA-1:three_prime_utr;Parent=Msa0702620-mRNA-1
Gene Sequence

>Msa0702620

ATGGAGGTGACAAAGCTCATAGTTTTACCAACAGTTTTGGCTCTCTTTGTCCTTCTTTTGCATTTCATCACAAGAATTATCAAACTCAGAAAGCTTAATCTTCCTAAAGGAACCTTAGGATTTCCATTTGTTGGAGAAACCTTTGAATTTCTAAAAGCTAATCTTGAGGGAAAGCAAATAAGGTTCATACAAGAGAGAATGAAGAAATATGACTCAAAAGTTTTCAAGACTTCAATGTTTGGAGAGAATATTGCTGTGTTTTGTGGACCAGCTGGGAACAAGTTCTTATTTAGCAATGAAAACAAGAATGTTCAAGTATGGTGGCCTAGCTCAGTGAAGAAGTTGTTAAGGTTGTCTCTTGTTAATAAGGTTGGTGATGAAGCAAAAGCAACTAGAAGGTTGCTTATGAGTTTTCTTAATCCAGAAACACTTAGAAATTACTTGCCAAATATGGATAGAATTGCTCAGCACCATATAAACACACATTGGAAAGGGAAGGAGCAAGTTGTTGTCTATCCTATAATACAGCTATACACATTTGAATTAGCTTGTTGCTTATTTTTAAGCATGGAAGACCCTATTCATGTAACAAACCTTTCATCATATTTTGAAGAATTTCTAAAAGGGATCATTGGCTTCGCAATCAACTTTCCTGGAACAAGGTTTCATAAGGCAATGAAAGCTACAAATGAAATAAGGAAAGAAATTAAAATGATTATGAAGAAAAGGAAAGTGGATTTGGATGAAAAGAAGGCATCACCTACACAAGACCTTTTATCACATTTACTTGTTACACCTGATACAAGTGGAAGGTTTTTGAATGAAGTGGAGATTATTGATAACATACTATTACTTCTTTTTGCTGGCCATGACACTTCTAGATCAGTACTATCATTGGTTATGAAGTATCTTGGAAATTTGCCTCAAGTTTATGAACAAGTGTTGAAAGAACAACTTGAAATTAGCCAAGGGAAAGAGGCAGGGGAGTTATTGCAATGGGAGGATATCCAGAAAATGAAATACTCTTGGAATGTTGCTTCTGAAGTTCTGAGGCTGTCCCCGCCTGTCGGTGGCGCTTTCAGAGATGCCATAAAGGATTTTACCTATGCTGATTATAACATCCCTAGTGGATGGAAGTTGCATTGGAACACACATACAACACACATGGATCCAACACTGTTTTCAAATCCTGAAAAATTTGATGCTTCAAGGTTTGAAGGAGAAGGGCCAACACCTTATTCATATGTTCCATTTGGAGGAGGACCTAGAATGTGTTTGGGGCAAGAGTTCGCTCGGTTAGAGATACTTGTTTTTATGCATAATATTGTGAAACGTTTCAAGTGGGATTTAGTTATTCCTGATGAGAAGTTCAAGTATGATCCTATGCTAGAGCCTGAAAATGGACTTCCAATCAGACTTCAACCTTCCCATTACACACGATAA
Protein sequence

>Msa0702620

MEVTKLIVLPTVLALFVLLLHFITRIIKLRKLNLPKGTLGFPFVGETFEFLKANLEGKQIRFIQERMKKYDSKVFKTSMFGENIAVFCGPAGNKFLFSNENKNVQVWWPSSVKKLLRLSLVNKVGDEAKATRRLLMSFLNPETLRNYLPNMDRIAQHHINTHWKGKEQVVVYPIIQLYTFELACCLFLSMEDPIHVTNLSSYFEEFLKGIIGFAINFPGTRFHKAMKATNEIRKEIKMIMKKRKVDLDEKKASPTQDLLSHLLVTPDTSGRFLNEVEIIDNILLLLFAGHDTSRSVLSLVMKYLGNLPQVYEQVLKEQLEISQGKEAGELLQWEDIQKMKYSWNVASEVLRLSPPVGGAFRDAIKDFTYADYNIPSGWKLHWNTHTTHMDPTLFSNPEKFDASRFEGEGPTPYSYVPFGGGPRMCLGQEFARLEILVFMHNIVKRFKWDLVIPDEKFKYDPMLEPENGLPIRLQPSHYTR*