Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786100 | XP_003617472.1 | 72.587 | 259 | 16 | 2 | 1 | 204 | 1 | 259 | 3.36e-125 | 364 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786100 | G7K3F3 | 72.587 | 259 | 16 | 2 | 1 | 204 | 1 | 259 | 1.60e-125 | 364 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0786100 | 0.806777 | 6.975028e-50 | -8.615850e-47 |
| Msa0006050 | Msa0786100 | 0.804656 | 1.945060e-49 | -8.615850e-47 |
| Msa0009530 | Msa0786100 | 0.807789 | 4.258217e-50 | -8.615850e-47 |
| Msa0009560 | Msa0786100 | 0.820321 | 7.296098e-53 | -8.615850e-47 |
| Msa0012380 | Msa0786100 | 0.853296 | 2.624395e-61 | -8.615850e-47 |
| Msa0017130 | Msa0786100 | 0.807906 | 4.021268e-50 | -8.615850e-47 |
| Msa0020320 | Msa0786100 | 0.849047 | 4.154595e-60 | -8.615850e-47 |
| Msa0026930 | Msa0786100 | 0.810565 | 1.082189e-50 | -8.615850e-47 |
| Msa0033930 | Msa0786100 | 0.804178 | 2.446650e-49 | -8.615850e-47 |
| Msa0046050 | Msa0786100 | 0.810535 | 1.098335e-50 | -8.615850e-47 |
| Msa0053960 | Msa0786100 | 0.809160 | 2.171090e-50 | -8.615850e-47 |
| Msa0054760 | Msa0786100 | 0.810294 | 1.237991e-50 | -8.615850e-47 |
| Msa0064550 | Msa0786100 | 0.862632 | 4.416934e-64 | -8.615850e-47 |
| Msa0072390 | Msa0786100 | 0.823381 | 1.428177e-53 | -8.615850e-47 |
| Msa0072830 | Msa0786100 | 0.819660 | 1.033620e-52 | -8.615850e-47 |
| Msa0072860 | Msa0786100 | 0.821490 | 3.928068e-53 | -8.615850e-47 |
| Msa0074780 | Msa0786100 | 0.811321 | 7.421126e-51 | -8.615850e-47 |
| Msa0081120 | Msa0786100 | 0.808261 | 3.378848e-50 | -8.615850e-47 |
| Msa0089510 | Msa0786100 | 0.840688 | 7.480689e-58 | -8.615850e-47 |
| Msa0089520 | Msa0786100 | 0.837881 | 4.001551e-57 | -8.615850e-47 |
| Msa0108070 | Msa0786100 | 0.836704 | 8.007791e-57 | -8.615850e-47 |
| Msa0109490 | Msa0786100 | 0.842794 | 2.080597e-58 | -8.615850e-47 |
| Msa0114700 | Msa0786100 | 0.809286 | 2.039557e-50 | -8.615850e-47 |
| Msa0116470 | Msa0786100 | 0.803357 | 3.622988e-49 | -8.615850e-47 |
| Msa0116510 | Msa0786100 | 0.818588 | 1.812357e-52 | -8.615850e-47 |
| Msa0604880 | Msa0786100 | 0.887429 | 1.437922e-72 | -8.615850e-47 |
| Msa0605250 | Msa0786100 | 0.829695 | 4.458446e-55 | -8.615850e-47 |
| Msa0608780 | Msa0786100 | 0.829274 | 5.642786e-55 | -8.615850e-47 |
| Msa0610780 | Msa0786100 | 0.818212 | 2.205238e-52 | -8.615850e-47 |
| Msa0610810 | Msa0786100 | 0.811132 | 8.159213e-51 | -8.615850e-47 |
| Msa0618260 | Msa0786100 | 0.801085 | 1.063208e-48 | -8.615850e-47 |
| Msa0621780 | Msa0786100 | 0.811572 | 6.546773e-51 | -8.615850e-47 |
| Msa0622250 | Msa0786100 | 0.851450 | 8.803200e-61 | -8.615850e-47 |
| Msa0627050 | Msa0786100 | 0.861933 | 7.238751e-64 | -8.615850e-47 |
| Msa0633720 | Msa0786100 | 0.835499 | 1.619031e-56 | -8.615850e-47 |
| Msa0636720 | Msa0786100 | 0.800552 | 1.366452e-48 | -8.615850e-47 |
| Msa0638500 | Msa0786100 | 0.806622 | 7.523610e-50 | -8.615850e-47 |
| Msa0644630 | Msa0786100 | 0.819356 | 1.212243e-52 | -8.615850e-47 |
| Msa0646190 | Msa0786100 | 0.888680 | 4.761637e-73 | -8.615850e-47 |
| Msa0646340 | Msa0786100 | 0.858176 | 9.859851e-63 | -8.615850e-47 |
| Msa0649250 | Msa0786100 | 0.828859 | 7.112502e-55 | -8.615850e-47 |
| Msa0651310 | Msa0786100 | 0.810505 | 1.115148e-50 | -8.615850e-47 |
| Msa0657860 | Msa0786100 | 0.808430 | 3.108934e-50 | -8.615850e-47 |
| Msa0660070 | Msa0786100 | 0.808737 | 2.673320e-50 | -8.615850e-47 |
| Msa0675010 | Msa0786100 | 0.827443 | 1.560071e-54 | -8.615850e-47 |
| Msa0681210 | Msa0786100 | 0.868201 | 7.786513e-66 | -8.615850e-47 |
| Msa0685890 | Msa0786100 | 0.830134 | 3.484425e-55 | -8.615850e-47 |
| Msa0693400 | Msa0786100 | 0.861597 | 9.171654e-64 | -8.615850e-47 |
| Msa0693500 | Msa0786100 | 0.826044 | 3.365633e-54 | -8.615850e-47 |
| Msa0697180 | Msa0786100 | 0.809951 | 1.467631e-50 | -8.615850e-47 |
| Msa0702200 | Msa0786100 | 0.840227 | 9.871111e-58 | -8.615850e-47 |
| Msa0702310 | Msa0786100 | 0.828990 | 6.611981e-55 | -8.615850e-47 |
| Msa0702360 | Msa0786100 | 0.832285 | 1.031485e-55 | -8.615850e-47 |
| Msa0702560 | Msa0786100 | 0.831552 | 1.564945e-55 | -8.615850e-47 |
| Msa0702620 | Msa0786100 | 0.839057 | 1.989421e-57 | -8.615850e-47 |
| Msa0705050 | Msa0786100 | 0.804098 | 2.543088e-49 | -8.615850e-47 |
| Msa0705810 | Msa0786100 | 0.828271 | 9.862958e-55 | -8.615850e-47 |
| Msa0707270 | Msa0786100 | 0.801706 | 7.935345e-49 | -8.615850e-47 |
| Msa0715510 | Msa0786100 | -0.808788 | 2.607777e-50 | -8.615850e-47 |
| Msa0742090 | Msa0786100 | 0.905506 | 3.994258e-80 | -8.615850e-47 |
| Msa0744690 | Msa0786100 | 0.804994 | 1.653353e-49 | -8.615850e-47 |
| Msa0748330 | Msa0786100 | 0.843471 | 1.372947e-58 | -8.615850e-47 |
| Msa0749150 | Msa0786100 | 0.812017 | 5.237326e-51 | -8.615850e-47 |
| Msa0775580 | Msa0786100 | 0.821298 | 4.350045e-53 | -8.615850e-47 |
| Msa0786100 | Msa0790640 | 0.801363 | 9.329357e-49 | -8.615850e-47 |
| Msa0786100 | Msa0793100 | 0.887310 | 1.596125e-72 | -8.615850e-47 |
| Msa0786100 | Msa0795710 | 0.812918 | 3.329607e-51 | -8.615850e-47 |
| Msa0786100 | Msa0798460 | 0.818666 | 1.740415e-52 | -8.615850e-47 |
| Msa0786100 | Msa0803530 | 0.801475 | 8.848624e-49 | -8.615850e-47 |
| Msa0786100 | Msa0806720 | 0.803924 | 2.763609e-49 | -8.615850e-47 |
| Msa0786100 | Msa0806760 | 0.805662 | 1.197970e-49 | -8.615850e-47 |
| Msa0786100 | Msa0812970 | 0.813174 | 2.925681e-51 | -8.615850e-47 |
| Msa0786100 | Msa0823310 | 0.858156 | 9.993242e-63 | -8.615850e-47 |
| Msa0786100 | Msa0833450 | 0.810503 | 1.115832e-50 | -8.615850e-47 |
| Msa0786100 | Msa0876270 | 0.828072 | 1.101413e-54 | -8.615850e-47 |
| Msa0786100 | Msa0879650 | 0.823208 | 1.567572e-53 | -8.615850e-47 |
| Msa0786100 | Msa0884840 | 0.838651 | 2.533184e-57 | -8.615850e-47 |
| Msa0786100 | Msa0887100 | 0.828068 | 1.104004e-54 | -8.615850e-47 |
| Msa0786100 | Msa0899730 | 0.821427 | 4.061744e-53 | -8.615850e-47 |
| Msa0786100 | Msa0912110 | 0.866198 | 3.397559e-65 | -8.615850e-47 |
| Msa0786100 | Msa0936650 | 0.801984 | 6.957832e-49 | -8.615850e-47 |
| Msa0786100 | Msa0944690 | 0.809499 | 1.835624e-50 | -8.615850e-47 |
| Msa0786100 | Msa0950570 | 0.804450 | 2.147449e-49 | -8.615850e-47 |
| Msa0786100 | Msa0964650 | 0.823041 | 1.714959e-53 | -8.615850e-47 |
| Msa0786100 | Msa0967670 | 0.808624 | 2.826802e-50 | -8.615850e-47 |
| Msa0786100 | Msa0968780 | 0.831412 | 1.694069e-55 | -8.615850e-47 |
| Msa0786100 | Msa0973890 | 0.804860 | 1.763733e-49 | -8.615850e-47 |
| Msa0786100 | Msa0975550 | 0.801414 | 9.106006e-49 | -8.615850e-47 |
| Msa0786100 | Msa0980980 | 0.805547 | 1.266615e-49 | -8.615850e-47 |
| Msa0786100 | Msa0984000 | 0.865034 | 7.913490e-65 | -8.615850e-47 |
| Msa0786100 | Msa0986620 | 0.839117 | 1.919232e-57 | -8.615850e-47 |
| Msa0786100 | Msa1004720 | 0.816121 | 6.508855e-52 | -8.615850e-47 |
| Msa0786100 | Msa1036250 | 0.824105 | 9.664287e-54 | -8.615850e-47 |
| Msa0786100 | Msa1040390 | 0.815640 | 8.335729e-52 | -8.615850e-47 |
| Msa0786100 | Msa1040730 | -0.810921 | 9.063561e-51 | -8.615850e-47 |
| Msa0786100 | Msa1043020 | 0.806700 | 7.243248e-50 | -8.615850e-47 |
| Msa0786100 | Msa1053690 | 0.832234 | 1.061897e-55 | -8.615850e-47 |
| Msa0786100 | Msa1076520 | 0.825790 | 3.868319e-54 | -8.615850e-47 |
| Msa0786100 | Msa1082150 | 0.849939 | 2.343408e-60 | -8.615850e-47 |
| Msa0786100 | Msa1083140 | 0.818676 | 1.731267e-52 | -8.615850e-47 |
| Msa0786100 | Msa1093390 | 0.800228 | 1.589937e-48 | -8.615850e-47 |
| Msa0786100 | Msa1096510 | 0.807626 | 4.611476e-50 | -8.615850e-47 |
| Msa0786100 | Msa1096520 | 0.805237 | 1.470485e-49 | -8.615850e-47 |
| Msa0786100 | Msa1096570 | 0.814788 | 1.288947e-51 | -8.615850e-47 |
| Msa0786100 | Msa1101300 | 0.805531 | 1.276076e-49 | -8.615850e-47 |
| Msa0786100 | Msa1118460 | 0.818227 | 2.188163e-52 | -8.615850e-47 |
| Msa0786100 | Msa1120660 | 0.818056 | 2.391869e-52 | -8.615850e-47 |
| Msa0786100 | Msa1122720 | 0.856197 | 3.785333e-62 | -8.615850e-47 |
| Msa0786100 | Msa1125450 | 0.826717 | 2.327534e-54 | -8.615850e-47 |
| Msa0786100 | Msa1127900 | 0.805848 | 1.095148e-49 | -8.615850e-47 |
| Msa0786100 | Msa1131900 | 0.800221 | 1.595675e-48 | -8.615850e-47 |
| Msa0786100 | Msa1133440 | 0.809407 | 1.921668e-50 | -8.615850e-47 |
| Msa0786100 | Msa1143860 | 0.805473 | 1.312679e-49 | -8.615850e-47 |
| Msa0786100 | Msa1144730 | 0.859105 | 5.205305e-63 | -8.615850e-47 |
| Msa0786100 | Msa1164570 | 0.844192 | 8.801294e-59 | -8.615850e-47 |
| Msa0786100 | Msa1165810 | 0.805086 | 1.581790e-49 | -8.615850e-47 |
| Msa0786100 | Msa1173380 | 0.875937 | 2.077826e-68 | -8.615850e-47 |
| Msa0786100 | Msa1182800 | 0.852903 | 3.400149e-61 | -8.615850e-47 |
| Msa0786100 | Msa1184010 | 0.845955 | 2.940876e-59 | -8.615850e-47 |
| Msa0786100 | Msa1193400 | 0.866857 | 2.097379e-65 | -8.615850e-47 |
| Msa0786100 | Msa1193430 | 0.874572 | 6.084011e-68 | -8.615850e-47 |
| Msa0786100 | Msa1209800 | 0.817242 | 3.649248e-52 | -8.615850e-47 |
| Msa0786100 | Msa1219060 | 0.823845 | 1.112330e-53 | -8.615850e-47 |
| Msa0786100 | Msa1224820 | 0.839208 | 1.817799e-57 | -8.615850e-47 |
| Msa0786100 | Msa1225140 | 0.803673 | 3.116143e-49 | -8.615850e-47 |
| Msa0786100 | Msa1228280 | 0.810214 | 1.288027e-50 | -8.615850e-47 |
| Msa0786100 | Msa1228330 | 0.808422 | 3.122110e-50 | -8.615850e-47 |
| Msa0786100 | Msa1228350 | 0.836820 | 7.476966e-57 | -8.615850e-47 |
| Msa0786100 | Msa1228460 | 0.825238 | 5.227674e-54 | -8.615850e-47 |
| Msa0786100 | Msa1236860 | 0.833679 | 4.643498e-56 | -8.615850e-47 |
| Msa0786100 | Msa1243730 | 0.878498 | 2.675741e-69 | -8.615850e-47 |
| Msa0786100 | Msa1249410 | 0.848445 | 6.102249e-60 | -8.615850e-47 |
| Msa0786100 | Msa1255020 | 0.814916 | 1.207183e-51 | -8.615850e-47 |
| Msa0786100 | Msa1257100 | 0.821024 | 5.029498e-53 | -8.615850e-47 |
| Msa0786100 | Msa1278420 | 0.804778 | 1.834379e-49 | -8.615850e-47 |
| Msa0786100 | Msa1295220 | 0.802533 | 5.363308e-49 | -8.615850e-47 |
| Msa0786100 | Msa1295470 | 0.811423 | 7.054655e-51 | -8.615850e-47 |
| Msa0786100 | Msa1317240 | 0.834227 | 3.385740e-56 | -8.615850e-47 |
| Msa0786100 | Msa1317710 | 0.809273 | 2.052476e-50 | -8.615850e-47 |
| Msa0786100 | Msa1326400 | 0.815816 | 7.614717e-52 | -8.615850e-47 |
| Msa0786100 | Msa1338590 | 0.852832 | 3.564074e-61 | -8.615850e-47 |
| Msa0786100 | Msa1343450 | 0.805046 | 1.612831e-49 | -8.615850e-47 |
| Msa0786100 | Msa1349640 | 0.832568 | 8.776285e-56 | -8.615850e-47 |
| Msa0786100 | Msa1349810 | 0.866885 | 2.055708e-65 | -8.615850e-47 |
| Msa0786100 | Msa1354090 | 0.835600 | 1.526753e-56 | -8.615850e-47 |
| Msa0786100 | Msa1358340 | 0.852697 | 3.893452e-61 | -8.615850e-47 |
| Msa0786100 | Msa1359620 | 0.813676 | 2.269046e-51 | -8.615850e-47 |
| Msa0786100 | Msa1359890 | 0.868984 | 4.348063e-66 | -8.615850e-47 |
| Msa0786100 | Msa1368150 | 0.825318 | 5.005021e-54 | -8.615850e-47 |
| Msa0786100 | Msa1369180 | 0.821882 | 3.187463e-53 | -8.615850e-47 |
| Msa0786100 | Msa1373390 | 0.834350 | 3.153314e-56 | -8.615850e-47 |
| Msa0786100 | Msa1375780 | 0.824919 | 6.217360e-54 | -8.615850e-47 |
| Msa0786100 | Msa1376010 | 0.803912 | 2.778887e-49 | -8.615850e-47 |
| Msa0786100 | Msa1386250 | 0.847042 | 1.485464e-59 | -8.615850e-47 |
| Msa0786100 | Msa1388520 | 0.806265 | 8.946542e-50 | -8.615850e-47 |
| Msa0786100 | Msa1393550 | 0.827179 | 1.804396e-54 | -8.615850e-47 |
| Msa0786100 | Msa1394900 | 0.832186 | 1.091277e-55 | -8.615850e-47 |
| Msa0786100 | Msa1403700 | 0.812467 | 4.178510e-51 | -8.615850e-47 |
| Msa0786100 | Msa1405380 | 0.832557 | 8.829869e-56 | -8.615850e-47 |
| Msa0786100 | Msa1406020 | 0.843895 | 1.057469e-58 | -8.615850e-47 |
| Msa0786100 | Msa1406990 | 0.821350 | 4.231694e-53 | -8.615850e-47 |
| Msa0786100 | Msa1426310 | 0.825804 | 3.838905e-54 | -8.615850e-47 |
| Msa0786100 | Msa1434660 | 0.857739 | 1.329231e-62 | -8.615850e-47 |
| Msa0786100 | Msa1436660 | 0.803900 | 2.795243e-49 | -8.615850e-47 |
| Msa0786100 | Msa1443550 | 0.890815 | 7.004373e-74 | -8.615850e-47 |
| Msa0786100 | Msa1450630 | 0.826996 | 1.996753e-54 | -8.615850e-47 |
| Msa0786100 | Msa1456620 | 0.845817 | 3.204502e-59 | -8.615850e-47 |
| Msa0786100 | Msa1459540 | 0.814999 | 1.157444e-51 | -8.615850e-47 |
| Msa0143280 | Msa0786100 | 0.844623 | 6.739351e-59 | -8.615850e-47 |
| Msa0154240 | Msa0786100 | 0.860646 | 1.786181e-63 | -8.615850e-47 |
| Msa0154270 | Msa0786100 | 0.827979 | 1.159974e-54 | -8.615850e-47 |
| Msa0157030 | Msa0786100 | 0.832352 | 9.925370e-56 | -8.615850e-47 |
| Msa0163960 | Msa0786100 | 0.836882 | 7.209258e-57 | -8.615850e-47 |
| Msa0171920 | Msa0786100 | 0.802258 | 6.110153e-49 | -8.615850e-47 |
| Msa0173370 | Msa0786100 | 0.813941 | 1.983898e-51 | -8.615850e-47 |
| Msa0178940 | Msa0786100 | 0.807161 | 5.785793e-50 | -8.615850e-47 |
| Msa0187980 | Msa0786100 | 0.828716 | 7.703373e-55 | -8.615850e-47 |
| Msa0197030 | Msa0786100 | 0.808620 | 2.832255e-50 | -8.615850e-47 |
| Msa0199740 | Msa0786100 | 0.810281 | 1.246062e-50 | -8.615850e-47 |
| Msa0216220 | Msa0786100 | 0.837156 | 6.137370e-57 | -8.615850e-47 |
| Msa0224370 | Msa0786100 | 0.801768 | 7.705662e-49 | -8.615850e-47 |
| Msa0224400 | Msa0786100 | 0.820461 | 6.776126e-53 | -8.615850e-47 |
| Msa0376480 | Msa0786100 | 0.800280 | 1.551978e-48 | -8.615850e-47 |
| Msa0378670 | Msa0786100 | 0.831029 | 2.104440e-55 | -8.615850e-47 |
| Msa0378700 | Msa0786100 | 0.833207 | 6.087964e-56 | -8.615850e-47 |
| Msa0387790 | Msa0786100 | 0.813015 | 3.169680e-51 | -8.615850e-47 |
| Msa0387970 | Msa0786100 | 0.844605 | 6.817709e-59 | -8.615850e-47 |
| Msa0392050 | Msa0786100 | 0.858744 | 6.674857e-63 | -8.615850e-47 |
| Msa0392540 | Msa0786100 | 0.812467 | 4.177745e-51 | -8.615850e-47 |
| Msa0400900 | Msa0786100 | 0.826518 | 2.596673e-54 | -8.615850e-47 |
| Msa0401340 | Msa0786100 | 0.825654 | 4.167324e-54 | -8.615850e-47 |
| Msa0404060 | Msa0786100 | 0.870224 | 1.714504e-66 | -8.615850e-47 |
| Msa0404070 | Msa0786100 | 0.819865 | 9.280365e-53 | -8.615850e-47 |
| Msa0404690 | Msa0786100 | 0.807271 | 5.484027e-50 | -8.615850e-47 |
| Msa0416540 | Msa0786100 | 0.813890 | 2.035602e-51 | -8.615850e-47 |
| Msa0419040 | Msa0786100 | 0.819918 | 9.021677e-53 | -8.615850e-47 |
| Msa0428330 | Msa0786100 | 0.867475 | 1.332017e-65 | -8.615850e-47 |
| Msa0432720 | Msa0786100 | 0.819171 | 1.336335e-52 | -8.615850e-47 |
| Msa0437790 | Msa0786100 | 0.809809 | 1.574986e-50 | -8.615850e-47 |
| Msa0440310 | Msa0786100 | 0.823142 | 1.624209e-53 | -8.615850e-47 |
| Msa0448120 | Msa0786100 | 0.827815 | 1.270001e-54 | -8.615850e-47 |
| Msa0469950 | Msa0786100 | 0.857091 | 2.066412e-62 | -8.615850e-47 |
| Msa0481050 | Msa0786100 | 0.807779 | 4.278321e-50 | -8.615850e-47 |
| Msa0238860 | Msa0786100 | 0.821314 | 4.312505e-53 | -8.615850e-47 |
| Msa0253160 | Msa0786100 | 0.818107 | 2.329031e-52 | -8.615850e-47 |
| Msa0291940 | Msa0786100 | 0.810105 | 1.359845e-50 | -8.615850e-47 |
| Msa0295570 | Msa0786100 | 0.851855 | 6.759667e-61 | -8.615850e-47 |
| Msa0303500 | Msa0786100 | 0.800106 | 1.683755e-48 | -8.615850e-47 |
| Msa0306160 | Msa0786100 | 0.820416 | 6.940562e-53 | -8.615850e-47 |
| Msa0308570 | Msa0786100 | 0.800059 | 1.721291e-48 | -8.615850e-47 |
| Msa0317360 | Msa0786100 | 0.817523 | 3.155438e-52 | -8.615850e-47 |
| Msa0343370 | Msa0786100 | 0.838759 | 2.375821e-57 | -8.615850e-47 |
| Msa0344680 | Msa0786100 | 0.859753 | 3.324574e-63 | -8.615850e-47 |
| Msa0346790 | Msa0786100 | 0.821724 | 3.467087e-53 | -8.615850e-47 |
| Msa0354390 | Msa0786100 | 0.805781 | 1.130726e-49 | -8.615850e-47 |
| Msa0500490 | Msa0786100 | 0.803824 | 2.898880e-49 | -8.615850e-47 |
| Msa0512310 | Msa0786100 | 0.806942 | 6.438094e-50 | -8.615850e-47 |
| Msa0521940 | Msa0786100 | -0.822389 | 2.432071e-53 | -8.615850e-47 |
| Msa0525270 | Msa0786100 | 0.829845 | 4.099306e-55 | -8.615850e-47 |
| Msa0525280 | Msa0786100 | 0.846487 | 2.106465e-59 | -8.615850e-47 |
| Msa0530340 | Msa0786100 | 0.876031 | 1.928838e-68 | -8.615850e-47 |
| Msa0545230 | Msa0786100 | 0.860866 | 1.531766e-63 | -8.615850e-47 |
| Msa0546080 | Msa0786100 | 0.844506 | 7.248626e-59 | -8.615850e-47 |
| Msa0548210 | Msa0786100 | 0.830425 | 2.958209e-55 | -8.615850e-47 |
| Msa0549540 | Msa0786100 | 0.884015 | 2.749310e-71 | -8.615850e-47 |
| Msa0556070 | Msa0786100 | 0.861723 | 8.396250e-64 | -8.615850e-47 |
| Msa0565760 | Msa0786100 | 0.838016 | 3.694234e-57 | -8.615850e-47 |
| Msa0565860 | Msa0786100 | 0.831137 | 1.979693e-55 | -8.615850e-47 |
| Msa0566010 | Msa0786100 | 0.822779 | 1.973746e-53 | -8.615850e-47 |
| Msa0569230 | Msa0786100 | 0.821508 | 3.889865e-53 | -8.615850e-47 |
| Msa0580540 | Msa0786100 | 0.804929 | 1.706283e-49 | -8.615850e-47 |
| Msa0584280 | Msa0786100 | 0.808810 | 2.578936e-50 | -8.615850e-47 |
| Msa0587250 | Msa0786100 | 0.828017 | 1.135589e-54 | -8.615850e-47 |
| Msa0600820 | Msa0786100 | 0.849092 | 4.036198e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786100 | MtrunA17_Chr5g0443541 | 72.587 | 259 | 16 | 2 | 1 | 204 | 1 | 259 | 3.09e-129 | 364 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0786100 | AT1G06460.1 | 40.127 | 157 | 63 | 4 | 77 | 204 | 131 | 285 | 2.54e-27 | 105 |
Find 65 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTATCTTTGTCTCTTTC+CGG | 0.204653 | 5_2:+71525677 | Msa0786100:five_prime_UTR |
| GTTCAGTATATTATTGTATA+CGG | 0.206743 | 5_2:-71529872 | None:intergenic |
| AGTTTGAAAATTTATTTAAA+TGG | 0.222092 | 5_2:-71529967 | None:intergenic |
| ATGGACCATATGAGGTTATT+TGG | 0.223219 | 5_2:+71529089 | Msa0786100:CDS |
| ATTACTGAGCTTCAAACTTT+AGG | 0.239599 | 5_2:-71529698 | None:intergenic |
| TCTCATCATTGGAAGCAAAA+TGG | 0.248751 | 5_2:-71525896 | None:intergenic |
| CAAAGACTTCACATAATAAA+TGG | 0.249109 | 5_2:-71525810 | None:intergenic |
| AGAATACACCATTCTGAAAT+TGG | 0.251394 | 5_2:+71528471 | Msa0786100:CDS |
| CATGGCTCTCTTGCATAATT+AGG | 0.258582 | 5_2:-71528291 | None:intergenic |
| GATTCTGCAACATCCATTCT+TGG | 0.264287 | 5_2:-71528619 | None:intergenic |
| ACGATTGATTCTTTCCTTGC+AGG | 0.285486 | 5_2:-71528324 | None:intergenic |
| GTAGACGCTCGACCGGTTCT+TGG | 0.303229 | 5_2:+71529008 | Msa0786100:CDS |
| TGCAGAATGTGGCACATATA+TGG | 0.327959 | 5_2:-71525783 | None:intergenic |
| CCTTGTATATTCTGTTTGCT+TGG | 0.343416 | 5_2:-71528426 | None:intergenic |
| AGAACCACGTTAACTAGAAA+TGG | 0.350121 | 5_2:+71525833 | Msa0786100:exon |
| CTCATCATTGGAAGCAAAAT+GGG | 0.380902 | 5_2:-71525895 | None:intergenic |
| GTAGACTATAATACGCCTTT+TGG | 0.387874 | 5_2:+71529939 | Msa0786100:three_prime_UTR |
| GTTATCATGGTGGAAGTTCC+CGG | 0.403076 | 5_2:+71528655 | Msa0786100:CDS |
| TATGAAGAAAATGAAGCATT+TGG | 0.403591 | 5_2:-71529046 | None:intergenic |
| GTTATTTGGCCACTTCCTCC+TGG | 0.416672 | 5_2:+71529103 | Msa0786100:CDS |
| ATCTACCCATCTTCTGCCTA+TGG | 0.436149 | 5_2:+71525923 | Msa0786100:CDS |
| ATTTAAATGGTGTGACCAAA+AGG | 0.439273 | 5_2:-71529954 | None:intergenic |
| GGGAAGTGAATTGTGTGAAT+AGG | 0.446404 | 5_2:-71525758 | None:intergenic |
| GGTAGATGAAATCTCATCAT+TGG | 0.447634 | 5_2:-71525907 | None:intergenic |
| ACCTGCTTCTCTCCAAGAAC+CGG | 0.454311 | 5_2:-71529020 | None:intergenic |
| AATTGAGTGGTCACCAAGAA+TGG | 0.455876 | 5_2:+71528606 | Msa0786100:CDS |
| CTTGCAGGTCTTGCAAAACA+TGG | 0.457049 | 5_2:-71528309 | None:intergenic |
| TTCGATGTAAATAGTATGTC+CGG | 0.462091 | 5_2:-71525696 | None:intergenic |
| AGTGGCCAAATAACCTCATA+TGG | 0.471836 | 5_2:-71529094 | None:intergenic |
| ACCGGTTCTTGGAGAGAAGC+AGG | 0.482203 | 5_2:+71529019 | Msa0786100:CDS |
| TTCAGTATATTATTGTATAC+GGG | 0.486436 | 5_2:-71529871 | None:intergenic |
| ACATACTATTTACATCGAAT+AGG | 0.487700 | 5_2:+71525700 | Msa0786100:five_prime_UTR |
| AGATTACCATAGGCAGAAGA+TGG | 0.487818 | 5_2:-71525929 | None:intergenic |
| AGAAAGTAAATATGTTATCA+TGG | 0.489310 | 5_2:+71528642 | Msa0786100:CDS |
| ACCAATGTGGCTAAATATGA+AGG | 0.493398 | 5_2:+71528267 | Msa0786100:CDS |
| ATCAAAGGTAGACGCTCGAC+CGG | 0.499586 | 5_2:+71529001 | Msa0786100:intron |
| ATACTGTAATGAACATATGA+TGG | 0.504498 | 5_2:+71529836 | Msa0786100:three_prime_UTR |
| CACAAGAGGGAGATACTGTA+TGG | 0.508140 | 5_2:+71529070 | Msa0786100:CDS |
| TTGTTCACACCAGGAGGAAG+TGG | 0.511903 | 5_2:-71529112 | None:intergenic |
| GATACTGTATGGACCATATG+AGG | 0.529593 | 5_2:+71529081 | Msa0786100:CDS |
| ACCTTCATATTTAGCCACAT+TGG | 0.536522 | 5_2:-71528268 | None:intergenic |
| CCAAGCAAACAGAATATACA+AGG | 0.537645 | 5_2:+71528426 | Msa0786100:CDS |
| TATGTCACCAACACTGACAC+CGG | 0.547443 | 5_2:-71528674 | None:intergenic |
| ACTTCCTCCTGGTGTGAACA+AGG | 0.557772 | 5_2:+71529114 | Msa0786100:CDS |
| ACTAGAAATGGAGAATGAGT+TGG | 0.562875 | 5_2:+71525845 | Msa0786100:exon |
| TTTGCCGATCATAGCAGAGT+TGG | 0.564172 | 5_2:+71529738 | Msa0786100:three_prime_UTR |
| GCTAATCACCAATTTCAGAA+TGG | 0.565371 | 5_2:-71528479 | None:intergenic |
| TTGCTTGGCCTAGAAAATGA+AGG | 0.570216 | 5_2:-71528411 | None:intergenic |
| ATTGCCAACTCTGCTATGAT+CGG | 0.595020 | 5_2:-71529742 | None:intergenic |
| TTCTCCATTTCTAGTTAACG+TGG | 0.595192 | 5_2:-71525837 | None:intergenic |
| ACATTGTCCTTGTTCACACC+AGG | 0.597534 | 5_2:-71529121 | None:intergenic |
| TAAATGGATAATGCAGAATG+TGG | 0.600331 | 5_2:-71525794 | None:intergenic |
| GAATGTGGCACATATATGGA+GGG | 0.604477 | 5_2:-71525779 | None:intergenic |
| GATTACCATAGGCAGAAGAT+GGG | 0.610033 | 5_2:-71525928 | None:intergenic |
| ATACTATATATATACACGAT+AGG | 0.613537 | 5_2:-71529815 | None:intergenic |
| AGAATGTGGCACATATATGG+AGG | 0.619726 | 5_2:-71525780 | None:intergenic |
| CAACCAATGACTAAAATGCA+AGG | 0.630284 | 5_2:+71528363 | Msa0786100:CDS |
| ATGTCACCAACACTGACACC+GGG | 0.638032 | 5_2:-71528673 | None:intergenic |
| CTTGGCCTAGAAAATGAAGG+TGG | 0.645955 | 5_2:-71528408 | None:intergenic |
| AATGTGGCACATATATGGAG+GGG | 0.651025 | 5_2:-71525778 | None:intergenic |
| TGAACAGAAAATGTCTACAC+AGG | 0.654962 | 5_2:+71529890 | Msa0786100:three_prime_UTR |
| TTGTCCTTGTTCACACCAGG+AGG | 0.665283 | 5_2:-71529118 | None:intergenic |
| AAGTAAATATGTTATCATGG+TGG | 0.679739 | 5_2:+71528645 | Msa0786100:CDS |
| TGTTGCTCCTAAAACCAATG+TGG | 0.717404 | 5_2:+71528254 | Msa0786100:CDS |
| TATTATAGTCTACATGACGA+CGG | 0.774032 | 5_2:-71529929 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAAAAAAAAAA+GGG | - | chr5_2:71526789-71526808 | None:intergenic | 0.0% |
| !! | AAAAAAAAAAAAAAAAAAAA+AGG | - | chr5_2:71526789-71526808 | None:intergenic | 0.0% |
| !! | TCATAATATTCAATAAAATA+AGG | + | chr5_2:71526279-71526298 | Msa0786100:intron | 10.0% |
| !! | AATTTAATTAAGGAAAATTT+AGG | - | chr5_2:71527449-71527468 | None:intergenic | 10.0% |
| !!! | TTTTATTGAATTATCATTTT+AGG | - | chr5_2:71526985-71527004 | None:intergenic | 10.0% |
| !! | TTATTTGTACAAAAAAAAAA+AGG | - | chr5_2:71527177-71527196 | None:intergenic | 10.0% |
| !!! | ATCTCATATTTTTTTATTTA+TGG | + | chr5_2:71527271-71527290 | Msa0786100:intron | 10.0% |
| !! | TAAAGAATAAAAAGAATTAA+TGG | + | chr5_2:71527474-71527493 | Msa0786100:intron | 10.0% |
| !!! | GTTTTTGTAAAAAAAAAAAA+AGG | + | chr5_2:71527496-71527515 | Msa0786100:intron | 10.0% |
| !! | AAGTATATATCTTGTATTAA+TGG | + | chr5_2:71526028-71526047 | Msa0786100:intron | 15.0% |
| !!! | AATTATGATCATTTTGAAAA+AGG | - | chr5_2:71526499-71526518 | None:intergenic | 15.0% |
| !!! | TTTTTCAAAATGATCATAAT+TGG | + | chr5_2:71526498-71526517 | Msa0786100:intron | 15.0% |
| !!! | TTAATTCTTTAATCCTTTTA+AGG | + | chr5_2:71526864-71526883 | Msa0786100:intron | 15.0% |
| !! | AATTCATATTTCTTCATTTA+TGG | + | chr5_2:71527358-71527377 | Msa0786100:intron | 15.0% |
| !! | ATTATGTTTAATTCCTTAAA+AGG | + | chr5_2:71527414-71527433 | Msa0786100:intron | 15.0% |
| !!! | TTAATTCTTTAATCCTTTTA+AGG | - | chr5_2:71526864-71526883 | None:intergenic | 15.0% |
| !! | TAAAAAAAAAAAAAGGTTTG+AGG | + | chr5_2:71527503-71527522 | Msa0786100:intron | 15.0% |
| !! | TGTAATTATTAACTTTACAT+CGG | + | chr5_2:71528189-71528208 | Msa0786100:intron | 15.0% |
| !!! | AATATATGATTAGCTAAATA+TGG | + | chr5_2:71528537-71528556 | Msa0786100:intron | 15.0% |
| !! | AAAAAAATGAATTGATTGAA+TGG | - | chr5_2:71528830-71528849 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTAGAATTTGAGT+TGG | + | chr5_2:71529401-71529420 | Msa0786100:intron | 15.0% |
| !! | AATGGTGATATTTATAACTT+TGG | + | chr5_2:71526046-71526065 | Msa0786100:intron | 20.0% |
| !! | AATATGGAAATTCTGAATTA+GGG | - | chr5_2:71526184-71526203 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAAAAGGGTTTG+AGG | - | chr5_2:71526782-71526801 | None:intergenic | 20.0% |
| !! | ATTGTGTTTAATTCCTTAAA+AGG | - | chr5_2:71526880-71526899 | None:intergenic | 20.0% |
| !! | TATGAGAGATGAATAATATT+CGG | + | chr5_2:71526948-71526967 | Msa0786100:intron | 20.0% |
| !!! | TTTTTTGAAGAATAGAAAAG+TGG | - | chr5_2:71527202-71527221 | None:intergenic | 20.0% |
| !! | AAAAAGAATCGTGTATTTAA+TGG | + | chr5_2:71527329-71527348 | Msa0786100:intron | 20.0% |
| !! | ATCAAAAATAGGATAACAAT+TGG | - | chr5_2:71527762-71527781 | None:intergenic | 20.0% |
| !! | AAAATACCGAAATTGAAATT+TGG | - | chr5_2:71528061-71528080 | None:intergenic | 20.0% |
| !!! | ATGGTTAGAAGTATATTATT+TGG | + | chr5_2:71528556-71528575 | Msa0786100:intron | 20.0% |
| !!! | TGGTTAGAAGTATATTATTT+GGG | + | chr5_2:71528557-71528576 | Msa0786100:intron | 20.0% |
| !! | AGAAAGTAAATATGTTATCA+TGG | + | chr5_2:71528642-71528661 | Msa0786100:CDS | 20.0% |
| !! | AAGAAAAACCTCTATTTATT+TGG | + | chr5_2:71529238-71529257 | Msa0786100:intron | 20.0% |
| !! | TTAAAAGACCAAATAAATAG+AGG | - | chr5_2:71529249-71529268 | None:intergenic | 20.0% |
| !!! | CTCAAATTCTAAAAAAAATG+TGG | - | chr5_2:71529400-71529419 | None:intergenic | 20.0% |
| !! | ATACTATATATATACACGAT+AGG | - | chr5_2:71529818-71529837 | None:intergenic | 20.0% |
| !! | TTCAGTATATTATTGTATAC+GGG | - | chr5_2:71529874-71529893 | None:intergenic | 20.0% |
| !! | GTTCAGTATATTATTGTATA+CGG | - | chr5_2:71529875-71529894 | None:intergenic | 20.0% |
| ! | ACATACTATTTACATCGAAT+AGG | + | chr5_2:71525700-71525719 | Msa0786100:five_prime_UTR | 25.0% |
| ! | TGACAAAAAAAATCGTAAGT+GGG | - | chr5_2:71525727-71525746 | None:intergenic | 25.0% |
| ! | ATGACAAAAAAAATCGTAAG+TGG | - | chr5_2:71525728-71525747 | None:intergenic | 25.0% |
| ! | CAAAGACTTCACATAATAAA+TGG | - | chr5_2:71525813-71525832 | None:intergenic | 25.0% |
| ! | ATGATAGATTAGATTACCAT+AGG | - | chr5_2:71525942-71525961 | None:intergenic | 25.0% |
| ! | GAATATGGAAATTCTGAATT+AGG | - | chr5_2:71526185-71526204 | None:intergenic | 25.0% |
| ! | GAAACAAGAAACAAAATTAG+AGG | - | chr5_2:71526261-71526280 | None:intergenic | 25.0% |
| ! | CAAAAACATATATTGCTTGA+TGG | - | chr5_2:71526323-71526342 | None:intergenic | 25.0% |
| !! | TTTTTATTGTCTGATCAAGA+AGG | - | chr5_2:71526525-71526544 | None:intergenic | 25.0% |
| !!! | CAACAATTTTCTTTCTGAAA+TGG | - | chr5_2:71526595-71526614 | None:intergenic | 25.0% |
| ! | CTCTCATATTTCTTCATTTA+TGG | - | chr5_2:71526936-71526955 | None:intergenic | 25.0% |
| ! | GAATAATATTCGGTAGTTAA+TGG | + | chr5_2:71526958-71526977 | Msa0786100:intron | 25.0% |
| !! | AATTTTCTTTCAGAAAACCA+GGG | + | chr5_2:71527694-71527713 | Msa0786100:intron | 25.0% |
| !!! | AATAGGATAACAATTGGTTT+TGG | - | chr5_2:71527756-71527775 | None:intergenic | 25.0% |
| ! | GAAACAGATTCATCAAAAAT+AGG | - | chr5_2:71527773-71527792 | None:intergenic | 25.0% |
| ! | TGATTGATGAACAAACAATT+TGG | - | chr5_2:71527795-71527814 | None:intergenic | 25.0% |
| ! | ATACATAAGAGCAATGAATT+TGG | - | chr5_2:71528158-71528177 | None:intergenic | 25.0% |
| ! | AAGTAAATATGTTATCATGG+TGG | + | chr5_2:71528645-71528664 | Msa0786100:CDS | 25.0% |
| ! | TTGAATGGAATCATATATGT+CGG | - | chr5_2:71528815-71528834 | None:intergenic | 25.0% |
| !! | TATGAAGAAAATGAAGCATT+TGG | - | chr5_2:71529049-71529068 | None:intergenic | 25.0% |
| !! | ATTTTCTTCATATCACAAGA+GGG | + | chr5_2:71529057-71529076 | Msa0786100:CDS | 25.0% |
| !!! | ATATTTTAGTCTTACTCACA+TGG | + | chr5_2:71529166-71529185 | Msa0786100:intron | 25.0% |
| !!! | TCACAAGATTAGTTTATAAG+AGG | + | chr5_2:71529437-71529456 | Msa0786100:intron | 25.0% |
| ! | TTGTACCTCTATATATACAT+TGG | + | chr5_2:71529611-71529630 | Msa0786100:intron | 25.0% |
| ! | AGTTTCCAATGTATATATAG+AGG | - | chr5_2:71529619-71529638 | None:intergenic | 25.0% |
| !!! | TTGTTTCTTTTTGCATTTTC+AGG | + | chr5_2:71529651-71529670 | Msa0786100:intron | 25.0% |
| !! | TGTTTCTTTTTGCATTTTCA+GGG | + | chr5_2:71529652-71529671 | Msa0786100:intron | 25.0% |
| ! | ATACTGTAATGAACATATGA+TGG | + | chr5_2:71529836-71529855 | Msa0786100:three_prime_UTR | 25.0% |
| AATCTATCTTTGTCTCTTTC+CGG | + | chr5_2:71525677-71525696 | Msa0786100:five_prime_UTR | 30.0% | |
| TTCGATGTAAATAGTATGTC+CGG | - | chr5_2:71525699-71525718 | None:intergenic | 30.0% | |
| TAAATGGATAATGCAGAATG+TGG | - | chr5_2:71525797-71525816 | None:intergenic | 30.0% | |
| AATTCCCAATCTTGAACTTA+GGG | - | chr5_2:71526143-71526162 | None:intergenic | 30.0% | |
| AAATTCCCAATCTTGAACTT+AGG | - | chr5_2:71526144-71526163 | None:intergenic | 30.0% | |
| ATAATAGCAAGTGCAGAATA+TGG | - | chr5_2:71526200-71526219 | None:intergenic | 30.0% | |
| ! | TTTGTGCATGTTTGAAATCA+CGG | + | chr5_2:71526339-71526358 | Msa0786100:intron | 30.0% |
| ! | TTTTTGATGCTTCAAAGTGT+TGG | + | chr5_2:71526387-71526406 | Msa0786100:intron | 30.0% |
| !! | CTTTCTGAAATGGATCAAAT+TGG | - | chr5_2:71526585-71526604 | None:intergenic | 30.0% |
| ! | CAATTTTCTTTCAGAAAACC+AGG | + | chr5_2:71527693-71527712 | Msa0786100:intron | 30.0% |
| TAATGATCCTATTAGAAACC+AGG | + | chr5_2:71527728-71527747 | Msa0786100:intron | 30.0% | |
| AATGATCCTATTAGAAACCA+GGG | + | chr5_2:71527729-71527748 | Msa0786100:intron | 30.0% | |
| GTATTCATCAATAAGAACAG+TGG | - | chr5_2:71527957-71527976 | None:intergenic | 30.0% | |
| GATGGTCCAAATTTCAATTT+CGG | + | chr5_2:71528052-71528071 | Msa0786100:intron | 30.0% | |
| AGTTGGAATATGCAATTTCA+TGG | - | chr5_2:71528126-71528145 | None:intergenic | 30.0% | |
| ! | ATTTAGTACGACGAATTTTC+AGG | + | chr5_2:71528215-71528234 | Msa0786100:intron | 30.0% |
| ! | TTTAGTACGACGAATTTTCA+GGG | + | chr5_2:71528216-71528235 | Msa0786100:intron | 30.0% |
| !!! | TATTTAGCCACATTGGTTTT+AGG | - | chr5_2:71528264-71528283 | None:intergenic | 30.0% |
| !! | AGAATACACCATTCTGAAAT+TGG | + | chr5_2:71528471-71528490 | Msa0786100:CDS | 30.0% |
| CCTGTAAAAGGGAAAAAAAA+GGG | - | chr5_2:71528586-71528605 | None:intergenic | 30.0% | |
| TCCTGTAAAAGGGAAAAAAA+AGG | - | chr5_2:71528587-71528606 | None:intergenic | 30.0% | |
| TCAATATGTGAATTCTTGAC+AGG | + | chr5_2:71528972-71528991 | Msa0786100:intron | 30.0% | |
| ! | CATTTTCTTCATATCACAAG+AGG | + | chr5_2:71529056-71529075 | Msa0786100:CDS | 30.0% |
| !! | CAAGATTAGTTTATAAGAGG+AGG | + | chr5_2:71529440-71529459 | Msa0786100:intron | 30.0% |
| TTGTAATCTCAATCGACAAA+AGG | - | chr5_2:71529533-71529552 | None:intergenic | 30.0% | |
| ATTACTGAGCTTCAAACTTT+AGG | - | chr5_2:71529701-71529720 | None:intergenic | 30.0% | |
| TATTATAGTCTACATGACGA+CGG | - | chr5_2:71529932-71529951 | None:intergenic | 30.0% | |
| ATTTAAATGGTGTGACCAAA+AGG | - | chr5_2:71529957-71529976 | None:intergenic | 30.0% | |
| AGAACCACGTTAACTAGAAA+TGG | + | chr5_2:71525833-71525852 | Msa0786100:exon | 35.0% | |
| !! | TTCTCCATTTCTAGTTAACG+TGG | - | chr5_2:71525840-71525859 | None:intergenic | 35.0% |
| ACTAGAAATGGAGAATGAGT+TGG | + | chr5_2:71525845-71525864 | Msa0786100:exon | 35.0% | |
| CTCATCATTGGAAGCAAAAT+GGG | - | chr5_2:71525898-71525917 | None:intergenic | 35.0% | |
| TCTCATCATTGGAAGCAAAA+TGG | - | chr5_2:71525899-71525918 | None:intergenic | 35.0% | |
| GGTAGATGAAATCTCATCAT+TGG | - | chr5_2:71525910-71525929 | None:intergenic | 35.0% | |
| AATCACCCTAAGTTCAAGAT+TGG | + | chr5_2:71526135-71526154 | Msa0786100:intron | 35.0% | |
| ATCACCCTAAGTTCAAGATT+GGG | + | chr5_2:71526136-71526155 | Msa0786100:intron | 35.0% | |
| AACCAGAGATCAAAAGAGTA+TGG | + | chr5_2:71526552-71526571 | Msa0786100:intron | 35.0% | |
| TAACTGCCGAATTATGAAAC+CGG | + | chr5_2:71526675-71526694 | Msa0786100:intron | 35.0% | |
| TTAACTACCGAGGAAAACTT+CGG | + | chr5_2:71526704-71526723 | Msa0786100:intron | 35.0% | |
| ! | CCGAAGTTTTCAATTTTCCT+CGG | - | chr5_2:71527545-71527564 | None:intergenic | 35.0% |
| CCGAGGAAAATTGAAAACTT+CGG | + | chr5_2:71526737-71526756 | Msa0786100:intron | 35.0% | |
| AAAAAGGTTTGAGGATTCCT+CGG | + | chr5_2:71527512-71527531 | Msa0786100:intron | 35.0% | |
| CCGAGGAAAATTGAAAACTT+CGG | - | chr5_2:71526737-71526756 | None:intergenic | 35.0% | |
| ! | CCGAAGTTTTCAATTTTCCT+CGG | + | chr5_2:71527545-71527564 | Msa0786100:intron | 35.0% |
| TTAACTACCGAGGAAAACTT+CGG | - | chr5_2:71526704-71526723 | None:intergenic | 35.0% | |
| TAACTGCCGAATTATGAAAC+CGG | - | chr5_2:71526675-71526694 | None:intergenic | 35.0% | |
| TGTTGTTGACACATTGCAAA+AGG | - | chr5_2:71527675-71527694 | None:intergenic | 35.0% | |
| !! | TCATTATTGCTTTTGTTCCC+TGG | - | chr5_2:71527714-71527733 | None:intergenic | 35.0% |
| !! | CTTCCTTTGGTCATTTTATG+AGG | + | chr5_2:71527907-71527926 | Msa0786100:intron | 35.0% |
| TTGCCTCATAAAATGACCAA+AGG | - | chr5_2:71527913-71527932 | None:intergenic | 35.0% | |
| ATACTCCTCAATATTGCACT+TGG | + | chr5_2:71527973-71527992 | Msa0786100:intron | 35.0% | |
| CATATCCAAGTGCAATATTG+AGG | - | chr5_2:71527981-71528000 | None:intergenic | 35.0% | |
| CTCAATATTGCACTTGGATA+TGG | + | chr5_2:71527979-71527998 | Msa0786100:intron | 35.0% | |
| ACTGCTCGATATTGATCTAA+TGG | + | chr5_2:71528083-71528102 | Msa0786100:intron | 35.0% | |
| ACCAATGTGGCTAAATATGA+AGG | + | chr5_2:71528267-71528286 | Msa0786100:CDS | 35.0% | |
| ACCTTCATATTTAGCCACAT+TGG | - | chr5_2:71528271-71528290 | None:intergenic | 35.0% | |
| !! | CTTGCATTTTAGTCATTGGT+TGG | - | chr5_2:71528365-71528384 | None:intergenic | 35.0% |
| CAACCAATGACTAAAATGCA+AGG | + | chr5_2:71528363-71528382 | Msa0786100:CDS | 35.0% | |
| !! | TAGCCTTGCATTTTAGTCAT+TGG | - | chr5_2:71528369-71528388 | None:intergenic | 35.0% |
| CCTTGTATATTCTGTTTGCT+TGG | - | chr5_2:71528429-71528448 | None:intergenic | 35.0% | |
| CCAAGCAAACAGAATATACA+AGG | + | chr5_2:71528426-71528445 | Msa0786100:CDS | 35.0% | |
| GCTAATCACCAATTTCAGAA+TGG | - | chr5_2:71528482-71528501 | None:intergenic | 35.0% | |
| !!! | CCCTTTTTTTTCCCTTTTAC+AGG | + | chr5_2:71528583-71528602 | Msa0786100:intron | 35.0% |
| ACCACTCAATTCCTGTAAAA+GGG | - | chr5_2:71528597-71528616 | None:intergenic | 35.0% | |
| ! | ACATTGACACTTTTGATGCA+AGG | + | chr5_2:71528743-71528762 | Msa0786100:intron | 35.0% |
| ATGGACCATATGAGGTTATT+TGG | + | chr5_2:71529089-71529108 | Msa0786100:CDS | 35.0% | |
| ! | CAGAAATGTGATCTAGTTTC+AGG | - | chr5_2:71529288-71529307 | None:intergenic | 35.0% |
| !! | TCTTTTTGCATTTTCAGGGA+TGG | + | chr5_2:71529656-71529675 | Msa0786100:intron | 35.0% |
| TGAACAGAAAATGTCTACAC+AGG | + | chr5_2:71529890-71529909 | Msa0786100:three_prime_UTR | 35.0% | |
| ! | GTAGACTATAATACGCCTTT+TGG | + | chr5_2:71529939-71529958 | Msa0786100:three_prime_UTR | 35.0% |
| GGGAAGTGAATTGTGTGAAT+AGG | - | chr5_2:71525761-71525780 | None:intergenic | 40.0% | |
| AATGTGGCACATATATGGAG+GGG | - | chr5_2:71525781-71525800 | None:intergenic | 40.0% | |
| GAATGTGGCACATATATGGA+GGG | - | chr5_2:71525782-71525801 | None:intergenic | 40.0% | |
| AGAATGTGGCACATATATGG+AGG | - | chr5_2:71525783-71525802 | None:intergenic | 40.0% | |
| TGCAGAATGTGGCACATATA+TGG | - | chr5_2:71525786-71525805 | None:intergenic | 40.0% | |
| GATTACCATAGGCAGAAGAT+GGG | - | chr5_2:71525931-71525950 | None:intergenic | 40.0% | |
| AGATTACCATAGGCAGAAGA+TGG | - | chr5_2:71525932-71525951 | None:intergenic | 40.0% | |
| ! | TGCATGTTTGAAATCACGGT+GGG | + | chr5_2:71526343-71526362 | Msa0786100:intron | 40.0% |
| !! | GTTTGAATTGGTGGTGTGTT+TGG | - | chr5_2:71526439-71526458 | None:intergenic | 40.0% |
| ACAGTGCATGTTTGAATTGG+TGG | - | chr5_2:71526448-71526467 | None:intergenic | 40.0% | |
| GAGACAGTGCATGTTTGAAT+TGG | - | chr5_2:71526451-71526470 | None:intergenic | 40.0% | |
| ! | CTCCATACTCTTTTGATCTC+TGG | - | chr5_2:71526557-71526576 | None:intergenic | 40.0% |
| TGACACATTGCATAAGACTG+TGG | + | chr5_2:71526616-71526635 | Msa0786100:intron | 40.0% | |
| ! | AAAATACGTTTTTGCCCCCT+CGG | + | chr5_2:71526648-71526667 | Msa0786100:intron | 40.0% |
| ! | TTAACTGCCGAAGTTTTCCT+CGG | - | chr5_2:71527571-71527590 | None:intergenic | 40.0% |
| AAAAGGGTTTGAGGATTCCT+CGG | - | chr5_2:71526773-71526792 | None:intergenic | 40.0% | |
| ! | TTAACTGCCGAAGTTTTCCT+CGG | + | chr5_2:71527571-71527590 | Msa0786100:intron | 40.0% |
| ! | AAAATACGTTTTTGCCCCCT+CGG | - | chr5_2:71526648-71526667 | None:intergenic | 40.0% |
| TTTGGTCCCTGGTTTCTAAT+AGG | - | chr5_2:71527738-71527757 | None:intergenic | 40.0% | |
| !!! | TAACAATTGGTTTTGGTCCC+TGG | - | chr5_2:71527749-71527768 | None:intergenic | 40.0% |
| CTACCACTGCAATTCTGATA+GGG | - | chr5_2:71527828-71527847 | None:intergenic | 40.0% | |
| ACTACCACTGCAATTCTGAT+AGG | - | chr5_2:71527829-71527848 | None:intergenic | 40.0% | |
| GCTTAGGAGATGTGACAATA+AGG | + | chr5_2:71527860-71527879 | Msa0786100:intron | 40.0% | |
| GAATTTGGATTGCATGCAGT+TGG | - | chr5_2:71528143-71528162 | None:intergenic | 40.0% | |
| !!! | ATTGGTTTTAGGAGCAACAG+AGG | - | chr5_2:71528253-71528272 | None:intergenic | 40.0% |
| TGTTGCTCCTAAAACCAATG+TGG | + | chr5_2:71528254-71528273 | Msa0786100:CDS | 40.0% | |
| CATGGCTCTCTTGCATAATT+AGG | - | chr5_2:71528294-71528313 | None:intergenic | 40.0% | |
| ! | ACGATTGATTCTTTCCTTGC+AGG | - | chr5_2:71528327-71528346 | None:intergenic | 40.0% |
| ! | TTGAGCCACCTTCATTTTCT+AGG | + | chr5_2:71528403-71528422 | Msa0786100:CDS | 40.0% |
| TTGCTTGGCCTAGAAAATGA+AGG | - | chr5_2:71528414-71528433 | None:intergenic | 40.0% | |
| ! | TCCCTTTTACAGGAATTGAG+TGG | + | chr5_2:71528593-71528612 | Msa0786100:intron | 40.0% |
| GACCACTCAATTCCTGTAAA+AGG | - | chr5_2:71528598-71528617 | None:intergenic | 40.0% | |
| AATTGAGTGGTCACCAAGAA+TGG | + | chr5_2:71528606-71528625 | Msa0786100:CDS | 40.0% | |
| GATTCTGCAACATCCATTCT+TGG | - | chr5_2:71528622-71528641 | None:intergenic | 40.0% | |
| TCGTCGCTCTTTGCAATTTA+TGG | + | chr5_2:71528908-71528927 | Msa0786100:intron | 40.0% | |
| CTTGACAGGTTGTCAATCAA+AGG | + | chr5_2:71528986-71529005 | Msa0786100:intron | 40.0% | |
| GATACTGTATGGACCATATG+AGG | + | chr5_2:71529081-71529100 | Msa0786100:CDS | 40.0% | |
| AGTGGCCAAATAACCTCATA+TGG | - | chr5_2:71529097-71529116 | None:intergenic | 40.0% | |
| ACTAAAGTAGTGCAGTAGCT+AGG | - | chr5_2:71529326-71529345 | None:intergenic | 40.0% | |
| TTTGTTGAGAGACTCGTCAT+TGG | - | chr5_2:71529508-71529527 | None:intergenic | 40.0% | |
| ATTGCCAACTCTGCTATGAT+CGG | - | chr5_2:71529745-71529764 | None:intergenic | 40.0% | |
| ATCTACCCATCTTCTGCCTA+TGG | + | chr5_2:71525923-71525942 | Msa0786100:CDS | 45.0% | |
| ! | GTGCATGTTTGAAATCACGG+TGG | + | chr5_2:71526342-71526361 | Msa0786100:intron | 45.0% |
| ! | GTTTGAAATCACGGTGGGTT+TGG | + | chr5_2:71526348-71526367 | Msa0786100:intron | 45.0% |
| !! | ATTGGTGGTGTGTTTGGCTT+TGG | - | chr5_2:71526433-71526452 | None:intergenic | 45.0% |
| ! | CTGCAGCCGGTTTCATAATT+CGG | - | chr5_2:71527601-71527620 | None:intergenic | 45.0% |
| ! | CTGCAGCCGGTTTCATAATT+CGG | + | chr5_2:71527601-71527620 | Msa0786100:intron | 45.0% |
| TGACACATTGCAAAAGGCTG+TGG | - | chr5_2:71527669-71527688 | None:intergenic | 45.0% | |
| ACTGCAATTCTGATAGGGAG+AGG | - | chr5_2:71527823-71527842 | None:intergenic | 45.0% | |
| TCTCCCTATCAGAATTGCAG+TGG | + | chr5_2:71527822-71527841 | Msa0786100:intron | 45.0% | |
| GTAGTCTGAACTCTGTGCTT+AGG | + | chr5_2:71527844-71527863 | Msa0786100:intron | 45.0% | |
| TCATGGAGTCAGAACATCAG+TGG | - | chr5_2:71528109-71528128 | None:intergenic | 45.0% | |
| !! | AGTACGACGAATTTTCAGGG+TGG | + | chr5_2:71528219-71528238 | Msa0786100:intron | 45.0% |
| CTTGCAGGTCTTGCAAAACA+TGG | - | chr5_2:71528312-71528331 | None:intergenic | 45.0% | |
| ! | CATGTTTTGCAAGACCTGCA+AGG | + | chr5_2:71528310-71528329 | Msa0786100:CDS | 45.0% |
| CTTGGCCTAGAAAATGAAGG+TGG | - | chr5_2:71528411-71528430 | None:intergenic | 45.0% | |
| ! | GTTATCATGGTGGAAGTTCC+CGG | + | chr5_2:71528655-71528674 | Msa0786100:CDS | 45.0% |
| TATGTCACCAACACTGACAC+CGG | - | chr5_2:71528677-71528696 | None:intergenic | 45.0% | |
| !! | CAGTGTTGGTGACATAAGAG+TGG | + | chr5_2:71528681-71528700 | Msa0786100:intron | 45.0% |
| !! | TGTTGGTGACATAAGAGTGG+AGG | + | chr5_2:71528684-71528703 | Msa0786100:intron | 45.0% |
| !! | CATATATGTCGGTGTCGTGT+TGG | - | chr5_2:71528804-71528823 | None:intergenic | 45.0% |
| ! | TCTTGTGTCGATGTTGTGTC+TGG | + | chr5_2:71528858-71528877 | Msa0786100:intron | 45.0% |
| CACAAGAGGGAGATACTGTA+TGG | + | chr5_2:71529070-71529089 | Msa0786100:CDS | 45.0% | |
| ACATTGTCCTTGTTCACACC+AGG | - | chr5_2:71529124-71529143 | None:intergenic | 45.0% | |
| TTTGCCGATCATAGCAGAGT+TGG | + | chr5_2:71529738-71529757 | Msa0786100:three_prime_UTR | 45.0% | |
| !! | TAAAGAATAAAAAAAATTAA+TGG | - | chr5_2:71526820-71526839 | None:intergenic | 5.0% |
| !! | TAAAGAATTAAATTTAATTA+AGG | - | chr5_2:71527439-71527458 | None:intergenic | 5.0% |
| !! | TAAAGAATTAAATTTAATTA+AGG | + | chr5_2:71527439-71527458 | Msa0786100:intron | 5.0% |
| ! | ACGGTGGGTTTGGCAAAATC+AGG | + | chr5_2:71526358-71526377 | Msa0786100:intron | 50.0% |
| ! | CGGTGGGTTTGGCAAAATCA+GGG | + | chr5_2:71526359-71526378 | Msa0786100:intron | 50.0% |
| ATTCGGCAGTTAACTGCCGA+GGG | - | chr5_2:71527618-71527637 | None:intergenic | 50.0% | |
| AATTCGGCAGTTAACTGCCG+AGG | - | chr5_2:71527617-71527636 | None:intergenic | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | + | chr5_2:71526720-71526739 | Msa0786100:intron | 50.0% | |
| ACTTCGGCAGTTAACTACCG+AGG | - | chr5_2:71526720-71526739 | None:intergenic | 50.0% | |
| AATTCGGCAGTTAACTGCCG+AGG | + | chr5_2:71527617-71527636 | Msa0786100:intron | 50.0% | |
| ATTCGGCAGTTAACTGCCGA+GGG | + | chr5_2:71527618-71527637 | Msa0786100:intron | 50.0% | |
| GACCAAAGGAAGCAGATGCT+TGG | - | chr5_2:71527899-71527918 | None:intergenic | 50.0% | |
| GAGGCAAACATCAGCTGAAG+AGG | + | chr5_2:71527926-71527945 | Msa0786100:intron | 50.0% | |
| CATGCAGTCAGGAGCAAGAT+CGG | + | chr5_2:71528030-71528049 | Msa0786100:intron | 50.0% | |
| ATGTCACCAACACTGACACC+GGG | - | chr5_2:71528676-71528695 | None:intergenic | 50.0% | |
| CTTGTCTAGTGTCTGACACG+TGG | + | chr5_2:71528766-71528785 | Msa0786100:intron | 50.0% | |
| ATCAAAGGTAGACGCTCGAC+CGG | + | chr5_2:71529001-71529020 | Msa0786100:intron | 50.0% | |
| ACCTGCTTCTCTCCAAGAAC+CGG | - | chr5_2:71529023-71529042 | None:intergenic | 50.0% | |
| GTTATTTGGCCACTTCCTCC+TGG | + | chr5_2:71529103-71529122 | Msa0786100:CDS | 50.0% | |
| TTGTTCACACCAGGAGGAAG+TGG | - | chr5_2:71529115-71529134 | None:intergenic | 50.0% | |
| ACTTCCTCCTGGTGTGAACA+AGG | + | chr5_2:71529114-71529133 | Msa0786100:CDS | 50.0% | |
| TTGTCCTTGTTCACACCAGG+AGG | - | chr5_2:71529121-71529140 | None:intergenic | 50.0% | |
| TTCGGCAGTTAACTGCCGAG+GGG | - | chr5_2:71526755-71526774 | None:intergenic | 55.0% | |
| CCTCGGTAGTTAACTGCAGC+CGG | - | chr5_2:71527588-71527607 | None:intergenic | 55.0% | |
| ACTTCGGCAGTTAACTGCCG+AGG | + | chr5_2:71526753-71526772 | Msa0786100:intron | 55.0% | |
| ACTTCGGCAGTTAACTGCCG+AGG | - | chr5_2:71526753-71526772 | None:intergenic | 55.0% | |
| CCTCGGTAGTTAACTGCAGC+CGG | + | chr5_2:71527588-71527607 | Msa0786100:intron | 55.0% | |
| TTCGGCAGTTAACTGCCGAG+GGG | + | chr5_2:71526755-71526774 | Msa0786100:intron | 55.0% | |
| CGCCAAGCATCTGCTTCCTT+TGG | + | chr5_2:71527894-71527913 | Msa0786100:intron | 55.0% | |
| CAGTCAGGAGCAAGATCGGA+TGG | + | chr5_2:71528034-71528053 | Msa0786100:intron | 55.0% | |
| ! | GAAGTTCCCGGTGTCAGTGT+TGG | + | chr5_2:71528667-71528686 | Msa0786100:intron | 55.0% |
| GTCTAGTGTCTGACACGTGG+AGG | + | chr5_2:71528769-71528788 | Msa0786100:intron | 55.0% | |
| ! | ACCGGTTCTTGGAGAGAAGC+AGG | + | chr5_2:71529019-71529038 | Msa0786100:CDS | 55.0% |
| TCGGCAGTTAACTGCCGAGG+GGG | - | chr5_2:71526756-71526775 | None:intergenic | 60.0% | |
| CCGGCTGCAGTTAACTACCG+AGG | + | chr5_2:71526694-71526713 | Msa0786100:intron | 60.0% | |
| CCGGCTGCAGTTAACTACCG+AGG | - | chr5_2:71526694-71526713 | None:intergenic | 60.0% | |
| TCGGCAGTTAACTGCCGAGG+GGG | + | chr5_2:71526756-71526775 | Msa0786100:intron | 60.0% | |
| TCTCGCGCAGTCATGCAGTC+AGG | + | chr5_2:71528019-71528038 | Msa0786100:intron | 60.0% | |
| ! | GTAGACGCTCGACCGGTTCT+TGG | + | chr5_2:71529008-71529027 | Msa0786100:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 71525673 | 71529984 | 71525673 | ID=Msa0786100;Name=Msa0786100 |
| chr5_2 | mRNA | 71525673 | 71529984 | 71525673 | ID=Msa0786100-mRNA-1;Parent=Msa0786100;Name=Msa0786100-mRNA-1;_AED=0.08;_eAED=0.08;_QI=179|0.5|0.6|1|1|1|5|275|204 |
| chr5_2 | exon | 71525673 | 71525944 | 71525673 | ID=Msa0786100-mRNA-1:exon:21556;Parent=Msa0786100-mRNA-1 |
| chr5_2 | exon | 71528237 | 71528492 | 71528237 | ID=Msa0786100-mRNA-1:exon:21557;Parent=Msa0786100-mRNA-1 |
| chr5_2 | exon | 71528605 | 71528682 | 71528605 | ID=Msa0786100-mRNA-1:exon:21558;Parent=Msa0786100-mRNA-1 |
| chr5_2 | exon | 71529008 | 71529158 | 71529008 | ID=Msa0786100-mRNA-1:exon:21559;Parent=Msa0786100-mRNA-1 |
| chr5_2 | exon | 71529673 | 71529984 | 71529673 | ID=Msa0786100-mRNA-1:exon:21560;Parent=Msa0786100-mRNA-1 |
| chr5_2 | five_prime_UTR | 71525673 | 71525851 | 71525673 | ID=Msa0786100-mRNA-1:five_prime_utr;Parent=Msa0786100-mRNA-1 |
| chr5_2 | CDS | 71525852 | 71525944 | 71525852 | ID=Msa0786100-mRNA-1:cds;Parent=Msa0786100-mRNA-1 |
| chr5_2 | CDS | 71528237 | 71528492 | 71528237 | ID=Msa0786100-mRNA-1:cds;Parent=Msa0786100-mRNA-1 |
| chr5_2 | CDS | 71528605 | 71528682 | 71528605 | ID=Msa0786100-mRNA-1:cds;Parent=Msa0786100-mRNA-1 |
| chr5_2 | CDS | 71529008 | 71529158 | 71529008 | ID=Msa0786100-mRNA-1:cds;Parent=Msa0786100-mRNA-1 |
| chr5_2 | CDS | 71529673 | 71529709 | 71529673 | ID=Msa0786100-mRNA-1:cds;Parent=Msa0786100-mRNA-1 |
| chr5_2 | three_prime_UTR | 71529710 | 71529984 | 71529710 | ID=Msa0786100-mRNA-1:three_prime_utr;Parent=Msa0786100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
