Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455100 | XP_004506244.1 | 67.241 | 58 | 15 | 2 | 60 | 114 | 215 | 271 | 5.41e-12 | 73.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455100 | A0A1S2YL19 | 67.241 | 58 | 15 | 2 | 60 | 114 | 215 | 271 | 2.58e-12 | 73.6 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026910 | Msa1455100 | 0.800418 | 1.454605e-48 | -8.615850e-47 |
| Msa0036140 | Msa1455100 | 0.808569 | 2.904047e-50 | -8.615850e-47 |
| Msa0045790 | Msa1455100 | 0.816591 | 5.111767e-52 | -8.615850e-47 |
| Msa0046160 | Msa1455100 | 0.813750 | 2.185615e-51 | -8.615850e-47 |
| Msa0061340 | Msa1455100 | 0.804803 | 1.812596e-49 | -8.615850e-47 |
| Msa0080090 | Msa1455100 | 0.800067 | 1.714939e-48 | -8.615850e-47 |
| Msa0084380 | Msa1455100 | 0.813281 | 2.771305e-51 | -8.615850e-47 |
| Msa0089750 | Msa1455100 | 0.807274 | 5.475381e-50 | -8.615850e-47 |
| Msa0114060 | Msa1455100 | 0.814479 | 1.508783e-51 | -8.615850e-47 |
| Msa1346840 | Msa1455100 | 0.804563 | 2.034148e-49 | -8.615850e-47 |
| Msa1368430 | Msa1455100 | 0.820516 | 6.580523e-53 | -8.615850e-47 |
| Msa1383230 | Msa1455100 | 0.800330 | 1.515834e-48 | -8.615850e-47 |
| Msa1385000 | Msa1455100 | 0.813941 | 1.983308e-51 | -8.615850e-47 |
| Msa1393570 | Msa1455100 | 0.803069 | 4.155477e-49 | -8.615850e-47 |
| Msa1395900 | Msa1455100 | 0.802756 | 4.824106e-49 | -8.615850e-47 |
| Msa1400870 | Msa1455100 | -0.813878 | 2.047725e-51 | -8.615850e-47 |
| Msa1409700 | Msa1455100 | 0.827622 | 1.413538e-54 | -8.615850e-47 |
| Msa1411020 | Msa1455100 | 0.808297 | 3.319296e-50 | -8.615850e-47 |
| Msa1420490 | Msa1455100 | 0.804379 | 2.221869e-49 | -8.615850e-47 |
| Msa1423390 | Msa1455100 | 0.806045 | 9.953324e-50 | -8.615850e-47 |
| Msa1424290 | Msa1455100 | 0.806460 | 8.138612e-50 | -8.615850e-47 |
| Msa1434350 | Msa1455100 | 0.802845 | 4.624692e-49 | -8.615850e-47 |
| Msa1436480 | Msa1455100 | 0.821417 | 4.081939e-53 | -8.615850e-47 |
| Msa1439320 | Msa1455100 | 0.802547 | 5.327818e-49 | -8.615850e-47 |
| Msa1440370 | Msa1455100 | 0.804695 | 1.909495e-49 | -8.615850e-47 |
| Msa1440740 | Msa1455100 | 0.807194 | 5.694970e-50 | -8.615850e-47 |
| Msa1440810 | Msa1455100 | 0.802389 | 5.741092e-49 | -8.615850e-47 |
| Msa1448560 | Msa1455100 | 0.801722 | 7.872418e-49 | -8.615850e-47 |
| Msa1455100 | Msa1463900 | 0.815206 | 1.040850e-51 | -8.615850e-47 |
| Msa0633700 | Msa1455100 | 0.800271 | 1.558463e-48 | -8.615850e-47 |
| Msa0637900 | Msa1455100 | 0.803497 | 3.389113e-49 | -8.615850e-47 |
| Msa0652940 | Msa1455100 | 0.814603 | 1.416319e-51 | -8.615850e-47 |
| Msa0662340 | Msa1455100 | 0.810217 | 1.286597e-50 | -8.615850e-47 |
| Msa0672690 | Msa1455100 | 0.825377 | 4.845421e-54 | -8.615850e-47 |
| Msa0693010 | Msa1455100 | -0.814459 | 1.524348e-51 | -8.615850e-47 |
| Msa0699280 | Msa1455100 | 0.820383 | 7.060555e-53 | -8.615850e-47 |
| Msa0707250 | Msa1455100 | 0.800337 | 1.510904e-48 | -8.615850e-47 |
| Msa0717890 | Msa1455100 | 0.815518 | 8.872949e-52 | -8.615850e-47 |
| Msa0731940 | Msa1455100 | 0.802257 | 6.112879e-49 | -8.615850e-47 |
| Msa0760130 | Msa1455100 | 0.823855 | 1.105994e-53 | -8.615850e-47 |
| Msa0767300 | Msa1455100 | 0.823115 | 1.647670e-53 | -8.615850e-47 |
| Msa0832340 | Msa1455100 | 0.820946 | 5.243091e-53 | -8.615850e-47 |
| Msa0835800 | Msa1455100 | 0.821658 | 3.591661e-53 | -8.615850e-47 |
| Msa0152400 | Msa1455100 | 0.803032 | 4.229642e-49 | -8.615850e-47 |
| Msa0159930 | Msa1455100 | 0.804837 | 1.782970e-49 | -8.615850e-47 |
| Msa0204840 | Msa1455100 | 0.800976 | 1.119224e-48 | -8.615850e-47 |
| Msa0211150 | Msa1455100 | 0.820251 | 7.569647e-53 | -8.615850e-47 |
| Msa0212990 | Msa1455100 | 0.806596 | 7.618183e-50 | -8.615850e-47 |
| Msa0219590 | Msa1455100 | 0.848310 | 6.651150e-60 | -8.615850e-47 |
| Msa0221470 | Msa1455100 | 0.815958 | 7.078729e-52 | -8.615850e-47 |
| Msa0221500 | Msa1455100 | 0.807662 | 4.530205e-50 | -8.615850e-47 |
| Msa1232700 | Msa1455100 | 0.803886 | 2.813942e-49 | -8.615850e-47 |
| Msa1243490 | Msa1455100 | 0.810575 | 1.076490e-50 | -8.615850e-47 |
| Msa1250290 | Msa1455100 | 0.802976 | 4.345301e-49 | -8.615850e-47 |
| Msa1297290 | Msa1455100 | 0.815829 | 7.564089e-52 | -8.615850e-47 |
| Msa1307560 | Msa1455100 | 0.802601 | 5.192559e-49 | -8.615850e-47 |
| Msa1308870 | Msa1455100 | 0.803036 | 4.222040e-49 | -8.615850e-47 |
| Msa1313280 | Msa1455100 | 0.814343 | 1.616970e-51 | -8.615850e-47 |
| Msa1331000 | Msa1455100 | 0.821505 | 3.896326e-53 | -8.615850e-47 |
| Msa1333480 | Msa1455100 | 0.812660 | 3.790720e-51 | -8.615850e-47 |
| Msa1335540 | Msa1455100 | 0.810772 | 9.759641e-51 | -8.615850e-47 |
| Msa0367870 | Msa1455100 | 0.802326 | 5.916775e-49 | -8.615850e-47 |
| Msa0376630 | Msa1455100 | 0.807593 | 4.685789e-50 | -8.615850e-47 |
| Msa0381610 | Msa1455100 | -0.809243 | 2.083722e-50 | -8.615850e-47 |
| Msa0422280 | Msa1455100 | 0.804349 | 2.254324e-49 | -8.615850e-47 |
| Msa0464680 | Msa1455100 | 0.817189 | 3.752212e-52 | -8.615850e-47 |
| Msa0471670 | Msa1455100 | 0.822215 | 2.668369e-53 | -8.615850e-47 |
| Msa1004840 | Msa1455100 | 0.827273 | 1.713878e-54 | -8.615850e-47 |
| Msa1023950 | Msa1455100 | 0.805809 | 1.115676e-49 | -8.615850e-47 |
| Msa1035960 | Msa1455100 | 0.806300 | 8.794589e-50 | -8.615850e-47 |
| Msa1063860 | Msa1455100 | 0.820027 | 8.520492e-53 | -8.615850e-47 |
| Msa1075650 | Msa1455100 | 0.823724 | 1.187601e-53 | -8.615850e-47 |
| Msa1101090 | Msa1455100 | 0.819174 | 1.334132e-52 | -8.615850e-47 |
| Msa0241140 | Msa1455100 | 0.803731 | 3.030319e-49 | -8.615850e-47 |
| Msa0267920 | Msa1455100 | 0.804289 | 2.319974e-49 | -8.615850e-47 |
| Msa0274830 | Msa1455100 | 0.815864 | 7.429866e-52 | -8.615850e-47 |
| Msa0291400 | Msa1455100 | 0.800769 | 1.234037e-48 | -8.615850e-47 |
| Msa0292930 | Msa1455100 | 0.802285 | 6.031658e-49 | -8.615850e-47 |
| Msa0317730 | Msa1455100 | 0.806600 | 7.601879e-50 | -8.615850e-47 |
| Msa0325830 | Msa1455100 | 0.805789 | 1.126524e-49 | -8.615850e-47 |
| Msa0330340 | Msa1455100 | 0.809727 | 1.640120e-50 | -8.615850e-47 |
| Msa0331000 | Msa1455100 | 0.825943 | 3.557945e-54 | -8.615850e-47 |
| Msa0342010 | Msa1455100 | 0.807386 | 5.185452e-50 | -8.615850e-47 |
| Msa1112380 | Msa1455100 | 0.800477 | 1.415188e-48 | -8.615850e-47 |
| Msa1121490 | Msa1455100 | 0.814911 | 1.210578e-51 | -8.615850e-47 |
| Msa1145810 | Msa1455100 | 0.801282 | 9.690023e-49 | -8.615850e-47 |
| Msa1204530 | Msa1455100 | 0.808517 | 2.978709e-50 | -8.615850e-47 |
| Msa1204630 | Msa1455100 | 0.808304 | 3.307006e-50 | -8.615850e-47 |
| Msa1205280 | Msa1455100 | 0.801678 | 8.039255e-49 | -8.615850e-47 |
| Msa1205370 | Msa1455100 | 0.815358 | 9.632472e-52 | -8.615850e-47 |
| Msa0484650 | Msa1455100 | 0.813886 | 2.039297e-51 | -8.615850e-47 |
| Msa0574390 | Msa1455100 | 0.813123 | 3.001243e-51 | -8.615850e-47 |
| Msa0585230 | Msa1455100 | 0.826821 | 2.197823e-54 | -8.615850e-47 |
| Msa0598160 | Msa1455100 | 0.819356 | 1.212682e-52 | -8.615850e-47 |
| Msa0880950 | Msa1455100 | 0.830716 | 2.510697e-55 | -8.615850e-47 |
| Msa0898750 | Msa1455100 | 0.805281 | 1.440028e-49 | -8.615850e-47 |
| Msa0900620 | Msa1455100 | 0.809556 | 1.785182e-50 | -8.615850e-47 |
| Msa0907950 | Msa1455100 | 0.806891 | 6.598709e-50 | -8.615850e-47 |
| Msa0928130 | Msa1455100 | 0.806693 | 7.267876e-50 | -8.615850e-47 |
| Msa0931520 | Msa1455100 | 0.812165 | 4.863795e-51 | -8.615850e-47 |
| Msa0967280 | Msa1455100 | 0.817038 | 4.057719e-52 | -8.615850e-47 |
| Msa0972100 | Msa1455100 | 0.805100 | 1.570885e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455100 | MtrunA17_Chr4g0025341 | 61.404 | 57 | 20 | 1 | 60 | 114 | 203 | 259 | 2.37e-14 | 68.9 |
| Msa1455100 | MtrunA17_Chr2g0322241 | 62.069 | 58 | 18 | 2 | 60 | 114 | 207 | 263 | 2.38e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1455100 | AT1G08470.1 | 55.172 | 58 | 22 | 2 | 60 | 114 | 201 | 257 | 2.63e-11 | 60.5 |
Find 80 sgRNAs with CRISPR-Local
Find 454 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGCTAAATTCACGGTTTC+TGG | 0.160239 | tig0035587:-1174 | Msa1455100:three_prime_UTR |
| AATGCTAAATTCACGGTTTC+TGG | 0.160239 | tig0035587:-1585 | Msa1455100:three_prime_UTR |
| ACGTCTGTTGGAACTGAATT+TGG | 0.183733 | tig0035587:+7090 | Msa1455100:intergenic |
| AATTTCACTAACTTGTCTTT+AGG | 0.244745 | tig0035587:-1223 | Msa1455100:three_prime_UTR |
| AATTTCACTAACTTGTCTTT+AGG | 0.244745 | tig0035587:-1634 | Msa1455100:three_prime_UTR |
| AAGGTTTCTTTCTGCATAAT+AGG | 0.246528 | tig0035587:-2008 | Msa1455100:three_prime_UTR |
| TATACATGTGGCTGGTACTA+TGG | 0.265399 | tig0035587:-85 | Msa1455100:three_prime_UTR |
| TCATTCAGCTGACAGTTTCT+AGG | 0.266378 | tig0035587:-2328 | Msa1455100:CDS |
| ATTTCACTAACTTGTCTTTA+GGG | 0.273096 | tig0035587:-1222 | Msa1455100:three_prime_UTR |
| ATTTCACTAACTTGTCTTTA+GGG | 0.273096 | tig0035587:-1633 | Msa1455100:three_prime_UTR |
| CCACCACAATGTGGTGGTTT+AGG | 0.297275 | tig0035587:-1921 | Msa1455100:three_prime_UTR |
| CTGGCTTCTGCGCTAGCATT+TGG | 0.311890 | tig0035587:+7032 | Msa1455100:intergenic |
| ATGAAACTGTGATTCATAAT+TGG | 0.312607 | tig0035587:-1974 | Msa1455100:three_prime_UTR |
| TATACGTGGCTGATCTGTAT+AGG | 0.342169 | tig0035587:-206 | Msa1455100:three_prime_UTR |
| GTACTCTATGATCTCTGATT+TGG | 0.350566 | tig0035587:-672 | Msa1455100:three_prime_UTR |
| ACGTTGGCGGTTCAAGAAAT+AGG | 0.350741 | tig0035587:-7071 | Msa1455100:CDS |
| AAACACGGGCTGTGAGTGTT+TGG | 0.351827 | tig0035587:-139 | Msa1455100:three_prime_UTR |
| AACACGGGCTGTGAGTGTTT+GGG | 0.360489 | tig0035587:-138 | Msa1455100:three_prime_UTR |
| TATGAAGGTGAATCCTTCTC+TGG | 0.374842 | tig0035587:-110 | Msa1455100:three_prime_UTR |
| AGGTTTCTTTCTGCATAATA+GGG | 0.386437 | tig0035587:-2007 | Msa1455100:three_prime_UTR |
| GTCCTTCAATGCTAAATTCA+CGG | 0.398742 | tig0035587:-1181 | Msa1455100:three_prime_UTR |
| GTCCTTCAATGCTAAATTCA+CGG | 0.398742 | tig0035587:-1592 | Msa1455100:three_prime_UTR |
| TGGCTTCTGCGCTAGCATTT+GGG | 0.403650 | tig0035587:+7033 | Msa1455100:intergenic |
| ATGCTAAATTCACGGTTTCT+GGG | 0.408682 | tig0035587:-1173 | Msa1455100:three_prime_UTR |
| ATGCTAAATTCACGGTTTCT+GGG | 0.408682 | tig0035587:-1584 | Msa1455100:three_prime_UTR |
| GAAATGCAACCATGTCACTA+TGG | 0.413836 | tig0035587:-2285 | Msa1455100:CDS |
| TGAACTATATAGCGAAAGAT+AGG | 0.421283 | tig0035587:-503 | Msa1455100:three_prime_UTR |
| AAGTGAAAACACTTCCATAT+TGG | 0.421819 | tig0035587:-694 | Msa1455100:three_prime_UTR |
| AATGAATTGATACAATTAGT+TGG | 0.427708 | tig0035587:-5149 | Msa1455100:CDS |
| CATTCAGCTGACAGTTTCTA+GGG | 0.432738 | tig0035587:-2327 | Msa1455100:CDS |
| CTTGAACCGCCAACGTCTGT+TGG | 0.439837 | tig0035587:+7078 | Msa1455100:intergenic |
| CTCTATGATCTCTGATTTGG+TGG | 0.456617 | tig0035587:-669 | Msa1455100:three_prime_UTR |
| CAAAGTCAAGATTGTTGTAA+AGG | 0.459726 | tig0035587:-284 | Msa1455100:three_prime_UTR |
| TTTGTGAAGGTGCTATTGGC+AGG | 0.459800 | tig0035587:-2193 | Msa1455100:CDS |
| TGTATGTATATAGCTGTTGT+TGG | 0.461927 | tig0035587:-1043 | Msa1455100:three_prime_UTR |
| TGTATGTATATAGCTGTTGT+TGG | 0.461927 | tig0035587:-1454 | Msa1455100:three_prime_UTR |
| TATGAAGGTGAATCCTTCTC+TGG | 0.477290 | tig0035587:-233 | Msa1455100:three_prime_UTR |
| CAAATGGCATTTCCCAGGGA+TGG | 0.482525 | tig0035587:-2229 | Msa1455100:CDS |
| ATACGTGGCTGATCTGTATA+GGG | 0.483256 | tig0035587:-205 | Msa1455100:three_prime_UTR |
| ATTCCCAAATGGCATTTCCC+AGG | 0.485931 | tig0035587:-2234 | Msa1455100:CDS |
| TAATTGGACGTGTGTGGAGG+AGG | 0.502458 | tig0035587:-1958 | Msa1455100:three_prime_UTR |
| TTGGACGTGTGTGGAGGAGG+AGG | 0.504412 | tig0035587:-1955 | Msa1455100:three_prime_UTR |
| CTCTGGGGTATACATGTGGC+TGG | 0.515475 | tig0035587:-93 | Msa1455100:three_prime_UTR |
| ACACGGGCTGTGAGTGTTTG+GGG | 0.525385 | tig0035587:-137 | Msa1455100:three_prime_UTR |
| TGCTAAATTCACGGTTTCTG+GGG | 0.530162 | tig0035587:-1172 | Msa1455100:three_prime_UTR |
| TGCTAAATTCACGGTTTCTG+GGG | 0.530162 | tig0035587:-1583 | Msa1455100:three_prime_UTR |
| ACAGTTTCTAGGGATGATAC+TGG | 0.531686 | tig0035587:-2317 | Msa1455100:CDS |
| GTCAAGATTGTTGTAAAGGT+GGG | 0.534259 | tig0035587:-280 | Msa1455100:three_prime_UTR |
| TTTCCCAGGGATGGTTCTAT+CGG | 0.534560 | tig0035587:-2220 | Msa1455100:CDS |
| TGTGTTTGGTGCTGATATGA+AGG | 0.537307 | tig0035587:-248 | Msa1455100:three_prime_UTR |
| AGTTTGTTTGTTCTCTTGTG+TGG | 0.544590 | tig0035587:-791 | Msa1455100:three_prime_UTR |
| AGTGTTTGGGGAAGGTATGA+AGG | 0.545988 | tig0035587:-125 | Msa1455100:three_prime_UTR |
| ATGAAGGTGAATCCTTCTCT+GGG | 0.547066 | tig0035587:-109 | Msa1455100:three_prime_UTR |
| GTTTAGGTTGAGTGTGAACT+CGG | 0.547879 | tig0035587:-1905 | Msa1455100:three_prime_UTR |
| GGTTGAGTGTGAACTCGGAA+AGG | 0.552101 | tig0035587:-1900 | Msa1455100:three_prime_UTR |
| AGGAACATTCAATTCCCAAA+TGG | 0.553727 | tig0035587:-2245 | Msa1455100:CDS |
| TCTGTTGGAACTGAATTTGG+AGG | 0.554521 | tig0035587:+7093 | Msa1455100:intergenic |
| TTCTAGGGATGATACTGGCA+AGG | 0.554718 | tig0035587:-2312 | Msa1455100:CDS |
| AGTCAAGATTGTTGTAAAGG+TGG | 0.558117 | tig0035587:-281 | Msa1455100:three_prime_UTR |
| TTCCCAAATGGCATTTCCCA+GGG | 0.561785 | tig0035587:-2233 | Msa1455100:CDS |
| GTTGAGTGTGAACTCGGAAA+GGG | 0.565056 | tig0035587:-1899 | Msa1455100:three_prime_UTR |
| TCAGTTCCAACAGACGTTGG+CGG | 0.567098 | tig0035587:-7084 | Msa1455100:CDS |
| CTGCATAATAGGGAGTAAAG+AGG | 0.575401 | tig0035587:-1997 | Msa1455100:three_prime_UTR |
| CCTTCTCTGGGGTATACATG+TGG | 0.590097 | tig0035587:-97 | Msa1455100:three_prime_UTR |
| AGTAAAGATTGTCGTAAACA+CGG | 0.594957 | tig0035587:-154 | Msa1455100:three_prime_UTR |
| ATTTGGTGGAAGACCACCAT+AGG | 0.599395 | tig0035587:-655 | Msa1455100:three_prime_UTR |
| TTTCAGGAAGACGAGGAACA+TGG | 0.602373 | tig0035587:-400 | Msa1455100:three_prime_UTR |
| CCTTCTCTGGTGTATATACG+TGG | 0.604468 | tig0035587:-220 | Msa1455100:three_prime_UTR |
| TGGAAACCATTGTTCTTGTG+AGG | 0.606117 | tig0035587:-2265 | Msa1455100:CDS |
| CGGAAAGGGACCAGAACTGT+GGG | 0.606143 | tig0035587:-1885 | Msa1455100:three_prime_UTR |
| GTAAAGATTGTCGTAAACAC+GGG | 0.632702 | tig0035587:-153 | Msa1455100:three_prime_UTR |
| GGGCTGTGAGTGTTTGGGGA+AGG | 0.638144 | tig0035587:-133 | Msa1455100:three_prime_UTR |
| GATTCATAATTGGACGTGTG+TGG | 0.639963 | tig0035587:-1964 | Msa1455100:three_prime_UTR |
| AATTCAGTTCCAACAGACGT+TGG | 0.647951 | tig0035587:-7087 | Msa1455100:CDS |
| TCGGAAAGGGACCAGAACTG+TGG | 0.657065 | tig0035587:-1886 | Msa1455100:three_prime_UTR |
| AATTGTCCACCACAATGTGG+TGG | 0.667141 | tig0035587:-1927 | Msa1455100:three_prime_UTR |
| TCATAATTGGACGTGTGTGG+AGG | 0.669833 | tig0035587:-1961 | Msa1455100:three_prime_UTR |
| ATATTGCTTTCAGGAAGACG+AGG | 0.674999 | tig0035587:-407 | Msa1455100:three_prime_UTR |
| TGAAGGTGAATCCTTCTCTG+GGG | 0.732054 | tig0035587:-108 | Msa1455100:three_prime_UTR |
| GTAAATTGTCCACCACAATG+TGG | 0.754301 | tig0035587:-1930 | Msa1455100:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAATATATATACAACA+GGG | + | tig0035587:403-422 | Msa1455100:intergenic | 10.0% |
| !! | AAAATAAATATATATACAAC+AGG | + | tig0035587:404-423 | Msa1455100:intergenic | 10.0% |
| !!! | TTATATTGTGTTATTAAAAA+AGG | + | tig0035587:427-446 | Msa1455100:intergenic | 10.0% |
| !! | TTTAATAACACAATATAAAT+AGG | - | tig0035587:429-448 | Msa1455100:three_prime_UTR | 10.0% |
| !! | CTTGAAAAATAATATATAAT+TGG | - | tig0035587:677-696 | Msa1455100:three_prime_UTR | 10.0% |
| !!! | TTATACATTTTTTTTTTTGA+AGG | + | tig0035587:729-748 | Msa1455100:intergenic | 10.0% |
| !! | AATTGAAATTTAGATTTATA+AGG | - | tig0035587:1810-1829 | Msa1455100:three_prime_UTR | 10.0% |
| !!! | TTTTTTTTTTTTTTTTTTGC+AGG | - | tig0035587:1926-1945 | Msa1455100:three_prime_UTR | 10.0% |
| !!! | ATAATTTTAATAACTCTATA+TGG | + | tig0035587:2336-2355 | Msa1455100:intergenic | 10.0% |
| !! | AGGTAAAAATTATTAAAAAA+TGG | - | tig0035587:4070-4089 | Msa1455100:intron | 10.0% |
| !! | GGTAAAAATTATTAAAAAAT+GGG | - | tig0035587:4071-4090 | Msa1455100:intron | 10.0% |
| !!! | TTATATAAAGTACTAAATTT+TGG | + | tig0035587:4413-4432 | Msa1455100:intergenic | 10.0% |
| !! | AAAATTAAGATTAGATAAAA+AGG | + | tig0035587:4960-4979 | Msa1455100:intergenic | 10.0% |
| !!! | GATTTTTATTTATTTTCTAT+TGG | - | tig0035587:6136-6155 | Msa1455100:intron | 10.0% |
| !! | AATAAATATATATACAACAG+GGG | + | tig0035587:402-421 | Msa1455100:intergenic | 15.0% |
| !! | TATATTCTTTATTCTTTGTT+TGG | + | tig0035587:555-574 | Msa1455100:intergenic | 15.0% |
| !! | ATTAATAGAATATTGTTTGT+TGG | - | tig0035587:890-909 | Msa1455100:three_prime_UTR | 15.0% |
| !!! | TATTTTGAATTAAATATGAG+AGG | + | tig0035587:1036-1055 | Msa1455100:intergenic | 15.0% |
| !! | ACATAAATTAATATCTCTAT+CGG | + | tig0035587:1149-1168 | Msa1455100:intergenic | 15.0% |
| !!! | CATTTATTCTTTGTTTATAA+TGG | - | tig0035587:2034-2053 | Msa1455100:three_prime_UTR | 15.0% |
| !! | TATTTAGTCTAAATAGTTTA+AGG | + | tig0035587:2387-2406 | Msa1455100:intergenic | 15.0% |
| !!! | CTTTTATAATTTTATTCACT+TGG | + | tig0035587:2847-2866 | Msa1455100:intergenic | 15.0% |
| !! | TCTTTACATATAACATTATT+TGG | - | tig0035587:3038-3057 | Msa1455100:intron | 15.0% |
| !!! | TTTTAAAATCTGTACAATAT+TGG | + | tig0035587:3177-3196 | Msa1455100:intergenic | 15.0% |
| !!! | AATAATAGATATTTTTACAC+TGG | - | tig0035587:5564-5583 | Msa1455100:intron | 15.0% |
| !!! | AATAATAGATATTTTTACAC+TGG | - | tig0035587:5564-5583 | Msa1455100:intron | 15.0% |
| !! | AGAAAATAAATAAAAATCGA+AGG | + | tig0035587:6134-6153 | Msa1455100:intergenic | 15.0% |
| !! | ATAAGAAAGACATAAAAGAA+CGG | + | tig0035587:334-353 | Msa1455100:intergenic | 20.0% |
| !! | AATAACACAATATAAATAGG+TGG | - | tig0035587:432-451 | Msa1455100:three_prime_UTR | 20.0% |
| !!! | TACTTTTTTTTAGATATGTG+AGG | + | tig0035587:498-517 | Msa1455100:intergenic | 20.0% |
| !! | ACAAAGAATAAAGAATATAG+AGG | - | tig0035587:556-575 | Msa1455100:three_prime_UTR | 20.0% |
| !! | AATATTCTTAGAGACTAATT+TGG | - | tig0035587:625-644 | Msa1455100:three_prime_UTR | 20.0% |
| !! | ATATTCTTAGAGACTAATTT+GGG | - | tig0035587:626-645 | Msa1455100:three_prime_UTR | 20.0% |
| !!! | TACATTTTTTTTTTTGAAGG+AGG | + | tig0035587:726-745 | Msa1455100:intergenic | 20.0% |
| !! | AAAGAAAAAGAAAGTAGTTT+AGG | - | tig0035587:1184-1203 | Msa1455100:three_prime_UTR | 20.0% |
| !! | AAGAAAAAGAAAGTAGTTTA+GGG | - | tig0035587:1185-1204 | Msa1455100:three_prime_UTR | 20.0% |
| !! | CATGTAAATTTAATTAACGT+AGG | + | tig0035587:1422-1441 | Msa1455100:intergenic | 20.0% |
| !! | ATTAGAATTAGAAATGGAAA+TGG | + | tig0035587:1765-1784 | Msa1455100:intergenic | 20.0% |
| !! | GTTAGAATTAGAATTAGAAA+TGG | + | tig0035587:1771-1790 | Msa1455100:intergenic | 20.0% |
| !! | AATGAATTGATACAATTAGT+TGG | - | tig0035587:1965-1984 | Msa1455100:three_prime_UTR | 20.0% |
| !! | TTATAATTGTAACTGCATTA+GGG | - | tig0035587:2721-2740 | Msa1455100:intron | 20.0% |
| !! | ATTCATTCATACAATTGAAT+CGG | - | tig0035587:2772-2791 | Msa1455100:intron | 20.0% |
| !!! | GTTATTTTGTCAAAACAAAA+AGG | - | tig0035587:2873-2892 | Msa1455100:intron | 20.0% |
| !!! | ATAACATACACATATTTTAG+TGG | - | tig0035587:2957-2976 | Msa1455100:intron | 20.0% |
| !! | TATTCTACTCAACATAAAAA+AGG | + | tig0035587:2987-3006 | Msa1455100:intergenic | 20.0% |
| !! | TATGTTGAGTAGAATAAAAT+AGG | - | tig0035587:2991-3010 | Msa1455100:intron | 20.0% |
| !! | GGAAATTTAATAACAGAAAT+TGG | - | tig0035587:3090-3109 | Msa1455100:intron | 20.0% |
| !! | TAAAACACTTGTATTTAAAG+TGG | - | tig0035587:3135-3154 | Msa1455100:intron | 20.0% |
| !!! | TGTATTTAAAGTGGAAATTT+TGG | - | tig0035587:3144-3163 | Msa1455100:intron | 20.0% |
| !! | TAAAACACTTGTATTTAAAG+CGG | - | tig0035587:3135-3154 | Msa1455100:intron | 20.0% |
| !! | TGATTTAAATTGTATAGCTA+TGG | + | tig0035587:3260-3279 | Msa1455100:intergenic | 20.0% |
| !!! | TAATTTTTACCTCTTATGTT+AGG | + | tig0035587:4062-4081 | Msa1455100:intergenic | 20.0% |
| !! | TACCATAAATAATCTATTCA+TGG | - | tig0035587:4220-4239 | Msa1455100:intron | 20.0% |
| !! | ACCATAAATAATCTATTCAT+GGG | - | tig0035587:4221-4240 | Msa1455100:intron | 20.0% |
| !!! | TTTTTTTTAATGAGCTTCAT+TGG | - | tig0035587:4326-4345 | Msa1455100:intron | 20.0% |
| !! | ATGATAATTTAGTAACCTTT+AGG | - | tig0035587:4354-4373 | Msa1455100:intron | 20.0% |
| !! | TGATAATTTAGTAACCTTTA+GGG | - | tig0035587:4355-4374 | Msa1455100:intron | 20.0% |
| !! | GCAAAATAAAAATATCATGT+AGG | + | tig0035587:4519-4538 | Msa1455100:intergenic | 20.0% |
| !!! | TTTTTCTTTCTTGAATTAGT+TGG | - | tig0035587:4565-4584 | Msa1455100:intron | 20.0% |
| !! | TATGAAATAAATTCTGTTAC+AGG | - | tig0035587:4759-4778 | Msa1455100:intron | 20.0% |
| !! | TAAGATTAGATAAAAAGGTA+AGG | + | tig0035587:4955-4974 | Msa1455100:intergenic | 20.0% |
| !!! | TGGTTTTATATATCTTACAT+TGG | - | tig0035587:5680-5699 | Msa1455100:intron | 20.0% |
| !!! | GTTTTGTTATCATAGTTTAT+AGG | - | tig0035587:6160-6179 | Msa1455100:intron | 20.0% |
| !! | CACATAATCTTTGTAAAAAT+TGG | - | tig0035587:6546-6565 | Msa1455100:intron | 20.0% |
| !! | TTATTCTTTGTTTGGTTGAT+GGG | + | tig0035587:547-566 | Msa1455100:intergenic | 25.0% |
| !! | TTTATTCTTTGTTTGGTTGA+TGG | + | tig0035587:548-567 | Msa1455100:intergenic | 25.0% |
| ! | TGTATAAAGTTACACCATAA+TGG | - | tig0035587:742-761 | Msa1455100:three_prime_UTR | 25.0% |
| ! | TTGAATTAAATATGAGAGGA+AGG | + | tig0035587:1032-1051 | Msa1455100:intergenic | 25.0% |
| ! | AGAACATGAAATGTGAAAAT+TGG | + | tig0035587:1072-1091 | Msa1455100:intergenic | 25.0% |
| ! | TTCTCTATTGTTCAATATGT+GGG | + | tig0035587:1244-1263 | Msa1455100:intergenic | 25.0% |
| ! | TATTGAACAATAGAGAAGAA+AGG | - | tig0035587:1247-1266 | Msa1455100:three_prime_UTR | 25.0% |
| ! | AAATATATGGGTAAAATGAC+CGG | + | tig0035587:1322-1341 | Msa1455100:intergenic | 25.0% |
| ! | TTAGAGCAACATAAAACTTT+GGG | + | tig0035587:1367-1386 | Msa1455100:intergenic | 25.0% |
| !! | TTTAGAGCAACATAAAACTT+TGG | + | tig0035587:1368-1387 | Msa1455100:intergenic | 25.0% |
| !!! | GTTGCTCTAAAATTGAATTT+AGG | - | tig0035587:1377-1396 | Msa1455100:three_prime_UTR | 25.0% |
| ! | TTAATTAACGTAGGTTACTT+AGG | + | tig0035587:1413-1432 | Msa1455100:intergenic | 25.0% |
| ! | TTTAGGTGTAACATAATTTC+AGG | - | tig0035587:1579-1598 | Msa1455100:three_prime_UTR | 25.0% |
| ! | TTAGGTGTAACATAATTTCA+GGG | - | tig0035587:1580-1599 | Msa1455100:three_prime_UTR | 25.0% |
| !!! | TTTTTCAGAAAGTAGATCTA+AGG | - | tig0035587:1635-1654 | Msa1455100:three_prime_UTR | 25.0% |
| !! | GAATCTAAAGTGAACATTAA+AGG | + | tig0035587:1696-1715 | Msa1455100:intergenic | 25.0% |
| ! | TAATTCTAATTCTAACTACC+AGG | - | tig0035587:1775-1794 | Msa1455100:three_prime_UTR | 25.0% |
| ! | AAAAAAAAAAACAGAGCAAG+TGG | + | tig0035587:1911-1930 | Msa1455100:intergenic | 25.0% |
| ! | TCAATACTGTCAAATCAAAA+CGG | - | tig0035587:2159-2178 | Msa1455100:CDS | 25.0% |
| ! | AAAATATATTTGTCTAAGCC+CGG | - | tig0035587:2232-2251 | Msa1455100:CDS | 25.0% |
| ! | GTTATAATTGTAACTGCATT+AGG | - | tig0035587:2720-2739 | Msa1455100:intron | 25.0% |
| !!! | AAATGGTTTGTTAGTTTAGA+CGG | + | tig0035587:2910-2929 | Msa1455100:intergenic | 25.0% |
| ! | AGGTACAGAGTAATATAAAA+TGG | + | tig0035587:2927-2946 | Msa1455100:intergenic | 25.0% |
| ! | TGTATGTTATTGCTAAAAGA+AGG | + | tig0035587:2947-2966 | Msa1455100:intergenic | 25.0% |
| !! | CATATAACATTATTTGGTTC+AGG | - | tig0035587:3044-3063 | Msa1455100:intron | 25.0% |
| ! | GGATGATAAAATAGATGATT+AGG | - | tig0035587:3065-3084 | Msa1455100:intron | 25.0% |
| ! | GATAAAATAGATGATTAGGA+AGG | - | tig0035587:3069-3088 | Msa1455100:intron | 25.0% |
| !!! | TGTATTTAAAGCGGAAATTT+TGG | - | tig0035587:3201-3220 | Msa1455100:intron | 25.0% |
| ! | ATGCTGAGTATAAAAACTAT+GGG | + | tig0035587:3521-3540 | Msa1455100:intergenic | 25.0% |
| ! | TATGCTGAGTATAAAAACTA+TGG | + | tig0035587:3522-3541 | Msa1455100:intergenic | 25.0% |
| ! | ATTATTAAAAAATGGGTCGA+AGG | - | tig0035587:4078-4097 | Msa1455100:intron | 25.0% |
| ! | TCCCATGAATAGATTATTTA+TGG | + | tig0035587:4225-4244 | Msa1455100:intergenic | 25.0% |
| ! | ATCTTAGATGTATACATTGA+AGG | + | tig0035587:4259-4278 | Msa1455100:intergenic | 25.0% |
| ! | AAAACTTCAGTAATTGTGTT+TGG | - | tig0035587:4472-4491 | Msa1455100:intron | 25.0% |
| !!! | TATTTGTGTTGTTTGTTTTG+TGG | - | tig0035587:4539-4558 | Msa1455100:intron | 25.0% |
| ! | TAACCAAAATCAAAGCATAT+GGG | + | tig0035587:4596-4615 | Msa1455100:intergenic | 25.0% |
| ! | TTAACCAAAATCAAAGCATA+TGG | + | tig0035587:4597-4616 | Msa1455100:intergenic | 25.0% |
| ! | TTTCATAATTCAGAACTTCA+AGG | + | tig0035587:4704-4723 | Msa1455100:intergenic | 25.0% |
| ! | GAATTATGAAATTCTGATAC+TGG | - | tig0035587:4713-4732 | Msa1455100:intron | 25.0% |
| ! | ATGAAACTGTGATTCATAAT+TGG | - | tig0035587:5140-5159 | Msa1455100:intron | 25.0% |
| ! | TGTAAGATAAAATGACTCTA+TGG | + | tig0035587:5268-5287 | Msa1455100:intergenic | 25.0% |
| !!! | AGAGTCATTTTATCTTACAT+TGG | - | tig0035587:5269-5288 | Msa1455100:intron | 25.0% |
| ! | AGAATATGGAAAGAATATGA+GGG | + | tig0035587:5392-5411 | Msa1455100:intergenic | 25.0% |
| ! | AGAAAAAACATAGCAGAATA+TGG | + | tig0035587:5406-5425 | Msa1455100:intergenic | 25.0% |
| ! | TAATTTCTTTAACAGAGAAG+AGG | + | tig0035587:5447-5466 | Msa1455100:intergenic | 25.0% |
| !! | AATTTCACTAACTTGTCTTT+AGG | - | tig0035587:5480-5499 | Msa1455100:intron | 25.0% |
| !! | ATTTCACTAACTTGTCTTTA+GGG | - | tig0035587:5481-5500 | Msa1455100:intron | 25.0% |
| ! | AGAATATGGAAAGAATATGA+GGG | + | tig0035587:5392-5411 | Msa1455100:intergenic | 25.0% |
| ! | AGAAAAAACATAGCAGAATA+TGG | + | tig0035587:5406-5425 | Msa1455100:intergenic | 25.0% |
| ! | TAATTTCTTTAACAGAGAAG+AGG | + | tig0035587:5447-5466 | Msa1455100:intergenic | 25.0% |
| !! | AATTTCACTAACTTGTCTTT+AGG | - | tig0035587:5480-5499 | Msa1455100:intron | 25.0% |
| !! | ATTTCACTAACTTGTCTTTA+GGG | - | tig0035587:5481-5500 | Msa1455100:intron | 25.0% |
| !!! | ATTTTTTTGCTGTTCCTTTT+TGG | - | tig0035587:6270-6289 | Msa1455100:intron | 25.0% |
| ! | ACTCAATTAGTGATCAAATA+CGG | + | tig0035587:6303-6322 | Msa1455100:intergenic | 25.0% |
| !!! | GTTTTTGTTATATTGCTTTC+AGG | - | tig0035587:6698-6717 | Msa1455100:intron | 25.0% |
| !! | TTTTGTTTCTTCGTCAGATA+AGG | + | tig0035587:238-257 | Msa1455100:intergenic | 30.0% |
| !!! | ATTTTTTTGGTGCTTTTTGC+TGG | - | tig0035587:366-385 | Msa1455100:three_prime_UTR | 30.0% |
| TAAATAGGTGGAATAAGATG+AGG | - | tig0035587:444-463 | Msa1455100:three_prime_UTR | 30.0% | |
| ! | TTTAGATATGTGAGGCATTA+AGG | + | tig0035587:490-509 | Msa1455100:intergenic | 30.0% |
| ! | TATTCTTTGTTTGGTTGATG+GGG | + | tig0035587:546-565 | Msa1455100:intergenic | 30.0% |
| GGTGTAACAAAAAATACTTG+GGG | + | tig0035587:931-950 | Msa1455100:intergenic | 30.0% | |
| GGGTGTAACAAAAAATACTT+GGG | + | tig0035587:932-951 | Msa1455100:intergenic | 30.0% | |
| !! | TAGGGTGTTTTTGTCAATTT+GGG | + | tig0035587:953-972 | Msa1455100:intergenic | 30.0% |
| !! | TTAGGGTGTTTTTGTCAATT+TGG | + | tig0035587:954-973 | Msa1455100:intergenic | 30.0% |
| AAAATGTGTAGCAAATCTCA+TGG | + | tig0035587:1124-1143 | Msa1455100:intergenic | 30.0% | |
| TCTCTATTGTTCAATATGTG+GGG | + | tig0035587:1243-1262 | Msa1455100:intergenic | 30.0% | |
| CTTCTCTATTGTTCAATATG+TGG | + | tig0035587:1245-1264 | Msa1455100:intergenic | 30.0% | |
| ATTGTCAAGTAGACAACAAT+TGG | - | tig0035587:1285-1304 | Msa1455100:three_prime_UTR | 30.0% | |
| ! | ACAATTGGCTTAATTGATTC+CGG | - | tig0035587:1300-1319 | Msa1455100:three_prime_UTR | 30.0% |
| TAGAGCAACATAAAACTTTG+GGG | + | tig0035587:1366-1385 | Msa1455100:intergenic | 30.0% | |
| !! | GTGAATTGATTTTACTTGAG+AGG | - | tig0035587:1514-1533 | Msa1455100:three_prime_UTR | 30.0% |
| ! | ATTTTACTTGAGAGGCTAAA+GGG | - | tig0035587:1522-1541 | Msa1455100:three_prime_UTR | 30.0% |
| TTCACTTTAGATTCCATTTC+TGG | - | tig0035587:1702-1721 | Msa1455100:three_prime_UTR | 30.0% | |
| ! | GAATTTTATATGCCTCCAAA+GGG | - | tig0035587:2076-2095 | Msa1455100:exon | 30.0% |
| CAATACTGTCAAATCAAAAC+GGG | - | tig0035587:2160-2179 | Msa1455100:CDS | 30.0% | |
| ! | TTTTTGTAAACGAAAACCTG+TGG | + | tig0035587:2269-2288 | Msa1455100:intergenic | 30.0% |
| !!! | CATACACATATTTTAGTGGA+AGG | - | tig0035587:2961-2980 | Msa1455100:intron | 30.0% |
| TAACAGAAATTGGAAGAAAG+TGG | - | tig0035587:3100-3119 | Msa1455100:intron | 30.0% | |
| ! | AGTATAATGTGTCCAAGTTT+TGG | - | tig0035587:3541-3560 | Msa1455100:intron | 30.0% |
| ! | GTATAATGTGTCCAAGTTTT+GGG | - | tig0035587:3542-3561 | Msa1455100:intron | 30.0% |
| ! | GTTTTCATGGAATCTTACAT+AGG | + | tig0035587:3609-3628 | Msa1455100:intergenic | 30.0% |
| ! | ATATTCAACAACGGTTTTCA+TGG | + | tig0035587:3622-3641 | Msa1455100:intergenic | 30.0% |
| ATGAAAACCGTTGTTGAATA+TGG | - | tig0035587:3621-3640 | Msa1455100:intron | 30.0% | |
| !! | GTTGAGGTAGATTTTAAAGA+AGG | - | tig0035587:3666-3685 | Msa1455100:intron | 30.0% |
| AGATATGTTGCAAAACTGAA+AGG | - | tig0035587:3707-3726 | Msa1455100:intron | 30.0% | |
| ATTCCAAAACTGCACAATAT+TGG | + | tig0035587:3811-3830 | Msa1455100:intergenic | 30.0% | |
| TTATAGAATCTTTCAATGCC+TGG | + | tig0035587:4130-4149 | Msa1455100:intergenic | 30.0% | |
| AGATGTATACATTGAAGGAA+TGG | + | tig0035587:4254-4273 | Msa1455100:intergenic | 30.0% | |
| ! | TACATCTAAGATAATGCTCT+TGG | - | tig0035587:4267-4286 | Msa1455100:intron | 30.0% |
| GTAGATGAAGAAAAGATGTT+TGG | + | tig0035587:4391-4410 | Msa1455100:intergenic | 30.0% | |
| TTTGGTTATTGTTGCATCTT+CGG | - | tig0035587:4490-4509 | Msa1455100:intron | 30.0% | |
| ATTAACATCAGTTCAGACAT+AGG | + | tig0035587:5033-5052 | Msa1455100:intergenic | 30.0% | |
| TGACAATGCTTTGATAAAAG+AGG | + | tig0035587:5066-5085 | Msa1455100:intergenic | 30.0% | |
| !!! | AAAAGTGCTGATAGTTTTGA+AGG | - | tig0035587:5087-5106 | Msa1455100:intron | 30.0% |
| AAGGTTTCTTTCTGCATAAT+AGG | - | tig0035587:5106-5125 | Msa1455100:intron | 30.0% | |
| AGGTTTCTTTCTGCATAATA+GGG | - | tig0035587:5107-5126 | Msa1455100:intron | 30.0% | |
| CAGAATATGGAAAGAATATG+AGG | + | tig0035587:5393-5412 | Msa1455100:intergenic | 30.0% | |
| GAAGAGGAAAACAAGAAAAA+AGG | + | tig0035587:5431-5450 | Msa1455100:intergenic | 30.0% | |
| TGTATGTATATAGCTGTTGT+TGG | - | tig0035587:5660-5679 | Msa1455100:intron | 30.0% | |
| CAGAATATGGAAAGAATATG+AGG | + | tig0035587:5393-5412 | Msa1455100:intergenic | 30.0% | |
| GAAGAGGAAAACAAGAAAAA+AGG | + | tig0035587:5431-5450 | Msa1455100:intergenic | 30.0% | |
| TGTATGTATATAGCTGTTGT+TGG | - | tig0035587:5660-5679 | Msa1455100:intron | 30.0% | |
| CAAGGATCTTCTCATATATA+AGG | + | tig0035587:6396-6415 | Msa1455100:intergenic | 30.0% | |
| !! | AAGTGTTTTCACTTTTCACA+AGG | + | tig0035587:6414-6433 | Msa1455100:intergenic | 30.0% |
| AAGTGAAAACACTTCCATAT+TGG | - | tig0035587:6420-6439 | Msa1455100:intron | 30.0% | |
| TGAACTATATAGCGAAAGAT+AGG | - | tig0035587:6611-6630 | Msa1455100:intron | 30.0% | |
| ATTGTATCAGACAAGAGTTA+TGG | + | tig0035587:6655-6674 | Msa1455100:intergenic | 30.0% | |
| TATGCATATCAGTTACAGAA+GGG | + | tig0035587:6766-6785 | Msa1455100:intergenic | 30.0% | |
| ATATGCATATCAGTTACAGA+AGG | + | tig0035587:6767-6786 | Msa1455100:intergenic | 30.0% | |
| CTTTACAACAATCTTGACTT+TGG | + | tig0035587:6832-6851 | Msa1455100:intergenic | 30.0% | |
| CAAAGTCAAGATTGTTGTAA+AGG | - | tig0035587:6830-6849 | Msa1455100:intron | 30.0% | |
| GTTTACGACAATCTTTACTT+TGG | + | tig0035587:6959-6978 | Msa1455100:intergenic | 30.0% | |
| AGTAAAGATTGTCGTAAACA+CGG | - | tig0035587:6960-6979 | Msa1455100:intron | 30.0% | |
| !!! | ACTATGGTTTTTTCTGGTAT+AGG | - | tig0035587:7045-7064 | Msa1455100:CDS | 30.0% |
| !!! | CTATGGTTTTTTCTGGTATA+GGG | - | tig0035587:7046-7065 | Msa1455100:CDS | 30.0% |
| ! | TTTTCATGAGGTTGCAATTT+TGG | - | tig0035587:7075-7094 | Msa1455100:CDS | 30.0% |
| ACCAAAAAGAGATTCAACAC+TGG | + | tig0035587:104-123 | Msa1455100:intergenic | 35.0% | |
| !! | TTCTGAAGTTGCGCAAAATA+AGG | + | tig0035587:154-173 | Msa1455100:intergenic | 35.0% |
| TCGTCAGATAAGGCTTAAAA+GGG | + | tig0035587:228-247 | Msa1455100:intergenic | 35.0% | |
| TTCGTCAGATAAGGCTTAAA+AGG | + | tig0035587:229-248 | Msa1455100:intergenic | 35.0% | |
| GTGGAATAAGATGAGGATAT+CGG | - | tig0035587:451-470 | Msa1455100:three_prime_UTR | 35.0% | |
| AGAGACTAATTTGGGTCTTA+TGG | - | tig0035587:634-653 | Msa1455100:three_prime_UTR | 35.0% | |
| CCATATCATTCTCTCCATTA+TGG | + | tig0035587:759-778 | Msa1455100:intergenic | 35.0% | |
| ! | CCATAATGGAGAGAATGATA+TGG | - | tig0035587:756-775 | Msa1455100:three_prime_UTR | 35.0% |
| ATGGAGAGAATGATATGGTA+TGG | - | tig0035587:761-780 | Msa1455100:three_prime_UTR | 35.0% | |
| AGAGAATGATATGGTATGGT+AGG | - | tig0035587:765-784 | Msa1455100:three_prime_UTR | 35.0% | |
| GGGGTGTAACAAAAAATACT+TGG | + | tig0035587:933-952 | Msa1455100:intergenic | 35.0% | |
| !! | AGGGTGTTTTTGTCAATTTG+GGG | + | tig0035587:952-971 | Msa1455100:intergenic | 35.0% |
| TAAATATGAGAGGAAGGAGA+TGG | + | tig0035587:1026-1045 | Msa1455100:intergenic | 35.0% | |
| TGAACAATAGAGAAGAAAGG+AGG | - | tig0035587:1250-1269 | Msa1455100:three_prime_UTR | 35.0% | |
| AGAGCAACATAAAACTTTGG+GGG | + | tig0035587:1365-1384 | Msa1455100:intergenic | 35.0% | |
| ! | GATTTTACTTGAGAGGCTAA+AGG | - | tig0035587:1521-1540 | Msa1455100:three_prime_UTR | 35.0% |
| GAACATTAAAGGCAACGTAA+CGG | + | tig0035587:1685-1704 | Msa1455100:intergenic | 35.0% | |
| ! | AATCTAGAGCAAACCAGAAA+TGG | + | tig0035587:1718-1737 | Msa1455100:intergenic | 35.0% |
| ! | TCAATTTTCTCACTTGAACC+TGG | + | tig0035587:1796-1815 | Msa1455100:intergenic | 35.0% |
| ! | GGAATTTTATATGCCTCCAA+AGG | - | tig0035587:2075-2094 | Msa1455100:exon | 35.0% |
| CTTTGATGGAAAAATCCCTT+TGG | + | tig0035587:2094-2113 | Msa1455100:intergenic | 35.0% | |
| ! | CAAAGGGATTTTTCCATCAA+AGG | - | tig0035587:2092-2111 | Msa1455100:CDS | 35.0% |
| GATGATTGTGAAACAGAACA+GGG | + | tig0035587:2575-2594 | Msa1455100:intergenic | 35.0% | |
| AGATGATTGTGAAACAGAAC+AGG | + | tig0035587:2576-2595 | Msa1455100:intergenic | 35.0% | |
| TCACAATCATCTTTCCAAGT+TGG | - | tig0035587:2584-2603 | Msa1455100:intron | 35.0% | |
| CACAATCATCTTTCCAAGTT+GGG | - | tig0035587:2585-2604 | Msa1455100:intron | 35.0% | |
| AATGTTGATCAAACCCAACT+TGG | + | tig0035587:2601-2620 | Msa1455100:intergenic | 35.0% | |
| !! | ATTTTTCAACCTCCAACTTG+AGG | - | tig0035587:2618-2637 | Msa1455100:intron | 35.0% |
| !! | TTTTTCAACCTCCAACTTGA+GGG | - | tig0035587:2619-2638 | Msa1455100:intron | 35.0% |
| AATAGTAGTGACTCAGCTTA+TGG | + | tig0035587:2673-2692 | Msa1455100:intergenic | 35.0% | |
| AGTCACTACTATTGTCATGT+AGG | - | tig0035587:2680-2699 | Msa1455100:intron | 35.0% | |
| AATTCATTATGGGGAACCTA+TGG | + | tig0035587:3410-3429 | Msa1455100:intergenic | 35.0% | |
| TAGGTTCCCCATAATGAATT+CGG | - | tig0035587:3410-3429 | Msa1455100:intron | 35.0% | |
| GGACACAAAACAGAGTAAAA+TGG | + | tig0035587:3488-3507 | Msa1455100:intergenic | 35.0% | |
| ATGTGGTAAACTCAAAAGGA+TGG | + | tig0035587:3584-3603 | Msa1455100:intergenic | 35.0% | |
| ATGGAAGCCATATTCAACAA+CGG | + | tig0035587:3631-3650 | Msa1455100:intergenic | 35.0% | |
| GCACAATATTGGTGAAGAAA+GGG | + | tig0035587:3800-3819 | Msa1455100:intergenic | 35.0% | |
| TGCACAATATTGGTGAAGAA+AGG | + | tig0035587:3801-3820 | Msa1455100:intergenic | 35.0% | |
| ! | TCACCAATATTGTGCAGTTT+TGG | - | tig0035587:3805-3824 | Msa1455100:intron | 35.0% |
| TTTGGCATTCCCTATAGAAT+TGG | - | tig0035587:3874-3893 | Msa1455100:intron | 35.0% | |
| TGAAATAAGCTTAGAAGTCC+AGG | - | tig0035587:4109-4128 | Msa1455100:intron | 35.0% | |
| ATGGTAAGCAATCAAGTCTT+AGG | + | tig0035587:4206-4225 | Msa1455100:intergenic | 35.0% | |
| AAAATCAGTGCAGTGATCTT+AGG | + | tig0035587:4302-4321 | Msa1455100:intergenic | 35.0% | |
| !! | TCACCCATATGCTTTGATTT+TGG | - | tig0035587:4590-4609 | Msa1455100:intron | 35.0% |
| GATGCATGATATGATGCAAT+CGG | + | tig0035587:4646-4665 | Msa1455100:intergenic | 35.0% | |
| AATGTTCCTCACAAGAACAA+TGG | + | tig0035587:4858-4877 | Msa1455100:intergenic | 35.0% | |
| AGGAACATTCAATTCCCAAA+TGG | - | tig0035587:4869-4888 | Msa1455100:intron | 35.0% | |
| ! | TTCTATCGGTCTTTTTGTGA+AGG | - | tig0035587:4908-4927 | Msa1455100:intron | 35.0% |
| !!! | TCTTTTTGTGAAGGTGCTAT+TGG | - | tig0035587:4917-4936 | Msa1455100:intron | 35.0% |
| CAGACATAGGAACGTAATAT+AGG | + | tig0035587:5020-5039 | Msa1455100:intergenic | 35.0% | |
| GTCCTTCAATGCTAAATTCA+CGG | - | tig0035587:5522-5541 | Msa1455100:intron | 35.0% | |
| ! | AACCGTGAATTTAGCATTGA+AGG | + | tig0035587:5527-5546 | Msa1455100:intergenic | 35.0% |
| AATGCTAAATTCACGGTTTC+TGG | - | tig0035587:5529-5548 | Msa1455100:intron | 35.0% | |
| ATGCTAAATTCACGGTTTCT+GGG | - | tig0035587:5530-5549 | Msa1455100:intron | 35.0% | |
| CAGGAAAACATGAACAAAGA+TGG | + | tig0035587:5624-5643 | Msa1455100:intergenic | 35.0% | |
| ! | CATCTTTGTTCATGTTTTCC+TGG | - | tig0035587:5622-5641 | Msa1455100:intron | 35.0% |
| GTCCTTCAATGCTAAATTCA+CGG | - | tig0035587:5522-5541 | Msa1455100:intron | 35.0% | |
| ! | AACCGTGAATTTAGCATTGA+AGG | + | tig0035587:5527-5546 | Msa1455100:intergenic | 35.0% |
| AATGCTAAATTCACGGTTTC+TGG | - | tig0035587:5529-5548 | Msa1455100:intron | 35.0% | |
| ATGCTAAATTCACGGTTTCT+GGG | - | tig0035587:5530-5549 | Msa1455100:intron | 35.0% | |
| CAGGAAAACATGAACAAAGA+TGG | + | tig0035587:5624-5643 | Msa1455100:intergenic | 35.0% | |
| ! | CATCTTTGTTCATGTTTTCC+TGG | - | tig0035587:5622-5641 | Msa1455100:intron | 35.0% |
| !!! | TTTTGCTGTTCCTTTTTGGT+TGG | - | tig0035587:6274-6293 | Msa1455100:intron | 35.0% |
| AATACGGAAACCAACCAAAA+AGG | + | tig0035587:6287-6306 | Msa1455100:intergenic | 35.0% | |
| ! | AGTTTGTTTGTTCTCTTGTG+TGG | - | tig0035587:6323-6342 | Msa1455100:intron | 35.0% |
| ! | GAGATCATAGAGTACCAATA+TGG | + | tig0035587:6437-6456 | Msa1455100:intergenic | 35.0% |
| GTACTCTATGATCTCTGATT+TGG | - | tig0035587:6442-6461 | Msa1455100:intron | 35.0% | |
| AGAAAAAGAGAGAATGCCTA+TGG | + | tig0035587:6478-6497 | Msa1455100:intergenic | 35.0% | |
| AGTCAAGATTGTTGTAAAGG+TGG | - | tig0035587:6833-6852 | Msa1455100:intron | 35.0% | |
| GTCAAGATTGTTGTAAAGGT+GGG | - | tig0035587:6834-6853 | Msa1455100:intron | 35.0% | |
| GTAAAGATTGTCGTAAACAC+GGG | - | tig0035587:6961-6980 | Msa1455100:intron | 35.0% | |
| !!! | ATAGGGTACTGTTTTTCATG+AGG | - | tig0035587:7063-7082 | Msa1455100:CDS | 35.0% |
| TCTGTTGGAACTGAATTTGG+AGG | + | tig0035587:24-43 | Msa0705540:intergenic | 40.0% | |
| ACGTCTGTTGGAACTGAATT+TGG | + | tig0035587:27-46 | Msa0705540:intergenic | 40.0% | |
| AATTCAGTTCCAACAGACGT+TGG | - | tig0035587:27-46 | Msa1455100:three_prime_UTR | 40.0% | |
| !! | GCCAGTGTTGAATCTCTTTT+TGG | - | tig0035587:100-119 | Msa1455100:three_prime_UTR | 40.0% |
| TGAAGTTGCGCAAAATAAGG+AGG | + | tig0035587:151-170 | Msa1455100:intergenic | 40.0% | |
| TCCTACAACATTCGATCCAA+TGG | - | tig0035587:280-299 | Msa1455100:three_prime_UTR | 40.0% | |
| ACCATTGGATCGAATGTTGT+AGG | + | tig0035587:284-303 | Msa1455100:intergenic | 40.0% | |
| TACAACATTCGATCCAATGG+TGG | - | tig0035587:283-302 | Msa1455100:three_prime_UTR | 40.0% | |
| AAGAACGGCACTTGAAGAAA+AGG | + | tig0035587:319-338 | Msa1455100:intergenic | 40.0% | |
| !!! | TTGGTGCTTTTTGCTGGTTT+TGG | - | tig0035587:372-391 | Msa1455100:three_prime_UTR | 40.0% |
| ! | GATATGTGAGGCATTAAGGT+GGG | + | tig0035587:486-505 | Msa1455100:intergenic | 40.0% |
| ! | AGATATGTGAGGCATTAAGG+TGG | + | tig0035587:487-506 | Msa1455100:intergenic | 40.0% |
| AATGATATGGTATGGTAGGC+AGG | - | tig0035587:769-788 | Msa1455100:three_prime_UTR | 40.0% | |
| ! | ATGTGGGGTTCTACGATTTT+GGG | + | tig0035587:1228-1247 | Msa1455100:intergenic | 40.0% |
| ! | TATGTGGGGTTCTACGATTT+TGG | + | tig0035587:1229-1248 | Msa1455100:intergenic | 40.0% |
| ACAATAGAGAAGAAAGGAGG+AGG | - | tig0035587:1253-1272 | Msa1455100:three_prime_UTR | 40.0% | |
| GAGCAACATAAAACTTTGGG+GGG | + | tig0035587:1364-1383 | Msa1455100:intergenic | 40.0% | |
| !!! | TTGCTGATTTTAGAGAGCCA+AGG | - | tig0035587:1995-2014 | Msa1455100:three_prime_UTR | 40.0% |
| GCCAAGGTACAACTAATTTC+TGG | - | tig0035587:2011-2030 | Msa1455100:three_prime_UTR | 40.0% | |
| GCCAGAAATTAGTTGTACCT+TGG | + | tig0035587:2015-2034 | Msa1455100:intergenic | 40.0% | |
| TGGTTCGAAGTTCATTCTTG+AGG | - | tig0035587:2054-2073 | Msa1455100:three_prime_UTR | 40.0% | |
| TGATGGAAAAATCCCTTTGG+AGG | + | tig0035587:2091-2110 | Msa1455100:intergenic | 40.0% | |
| TCTCAACACAACTCCTTTGA+TGG | + | tig0035587:2108-2127 | Msa1455100:intergenic | 40.0% | |
| AAAAAGCCGGAGTCTATCAT+GGG | + | tig0035587:2190-2209 | Msa1455100:intergenic | 40.0% | |
| ! | ATGATAGACTCCGGCTTTTT+CGG | - | tig0035587:2190-2209 | Msa1455100:CDS | 40.0% |
| !! | ATTTTAGCCCGTTCATCATC+CGG | + | tig0035587:2217-2236 | Msa1455100:intergenic | 40.0% |
| CTAGATACTTCGTACGCTAA+TGG | + | tig0035587:2442-2461 | Msa1455100:intergenic | 40.0% | |
| GTGCGTGAGAAGTTATAAGA+AGG | - | tig0035587:2483-2502 | Msa1455100:intron | 40.0% | |
| CTTCTTCTAATCCCTTCTCA+TGG | - | tig0035587:2516-2535 | Msa1455100:intron | 40.0% | |
| TGGTGAATACATCAGCTAAC+TGG | + | tig0035587:2542-2561 | Msa1455100:intergenic | 40.0% | |
| ! | TTTTCAACCTCCAACTTGAG+GGG | - | tig0035587:2620-2639 | Msa1455100:intron | 40.0% |
| TGCTCACTAATGCACAATGT+TGG | + | tig0035587:3234-3253 | Msa1455100:intergenic | 40.0% | |
| CATGTGTTGAAAGTAGCCAT+AGG | - | tig0035587:3391-3410 | Msa1455100:intron | 40.0% | |
| ACAGTGGCCGAATTCATTAT+GGG | + | tig0035587:3420-3439 | Msa1455100:intergenic | 40.0% | |
| TACAGTGGCCGAATTCATTA+TGG | + | tig0035587:3421-3440 | Msa1455100:intergenic | 40.0% | |
| GAGTATAAAAACTATGGGCC+AGG | + | tig0035587:3516-3535 | Msa1455100:intergenic | 40.0% | |
| ACTCAAAAGGATGGTTAGAG+TGG | + | tig0035587:3575-3594 | Msa1455100:intergenic | 40.0% | |
| GTTGTTGAATATGGCTTCCA+TGG | - | tig0035587:3630-3649 | Msa1455100:intron | 40.0% | |
| AAATCTACCTCAACGTTCCT+AGG | + | tig0035587:3660-3679 | Msa1455100:intergenic | 40.0% | |
| AAATTCAACGGAGCTTCAAC+TGG | + | tig0035587:3738-3757 | Msa1455100:intergenic | 40.0% | |
| GCTCAAGGAGGAAAATTCAA+CGG | + | tig0035587:3750-3769 | Msa1455100:intergenic | 40.0% | |
| TATAGGGAATGCCAAATCAG+TGG | + | tig0035587:3870-3889 | Msa1455100:intergenic | 40.0% | |
| TGCATTCCGCCAATTCTATA+GGG | + | tig0035587:3886-3905 | Msa1455100:intergenic | 40.0% | |
| ATGCATTCCGCCAATTCTAT+AGG | + | tig0035587:3887-3906 | Msa1455100:intergenic | 40.0% | |
| ATAGAATTGGCGGAATGCAT+AGG | - | tig0035587:3887-3906 | Msa1455100:intron | 40.0% | |
| CCTCTTATGTTAGGTGTCAA+AGG | + | tig0035587:4053-4072 | Msa1455100:intergenic | 40.0% | |
| CCTTTGACACCTAACATAAG+AGG | - | tig0035587:4050-4069 | Msa1455100:intron | 40.0% | |
| ! | TTGGTAGTTGAAGACCCTAA+AGG | + | tig0035587:4372-4391 | Msa1455100:intergenic | 40.0% |
| TCATTCAGCTGACAGTTTCT+AGG | - | tig0035587:4786-4805 | Msa1455100:intron | 40.0% | |
| CATTCAGCTGACAGTTTCTA+GGG | - | tig0035587:4787-4806 | Msa1455100:intron | 40.0% | |
| ! | ACAGTTTCTAGGGATGATAC+TGG | - | tig0035587:4797-4816 | Msa1455100:intron | 40.0% |
| GAAATGCAACCATGTCACTA+TGG | - | tig0035587:4829-4848 | Msa1455100:intron | 40.0% | |
| CAATGGTTTCCATAGTGACA+TGG | + | tig0035587:4841-4860 | Msa1455100:intergenic | 40.0% | |
| TGGAAACCATTGTTCTTGTG+AGG | - | tig0035587:4849-4868 | Msa1455100:intron | 40.0% | |
| CTGCATAATAGGGAGTAAAG+AGG | - | tig0035587:5117-5136 | Msa1455100:intron | 40.0% | |
| GATTCATAATTGGACGTGTG+TGG | - | tig0035587:5150-5169 | Msa1455100:CDS | 40.0% | |
| GTAAATTGTCCACCACAATG+TGG | - | tig0035587:5184-5203 | Msa1455100:intron | 40.0% | |
| !! | GTTTAGGTTGAGTGTGAACT+CGG | - | tig0035587:5209-5228 | Msa1455100:intron | 40.0% |
| TGCTAAATTCACGGTTTCTG+GGG | - | tig0035587:5531-5550 | Msa1455100:intron | 40.0% | |
| ACATGTGATAATCATTCGCC+AGG | + | tig0035587:5643-5662 | Msa1455100:intergenic | 40.0% | |
| TGCTAAATTCACGGTTTCTG+GGG | - | tig0035587:5531-5550 | Msa1455100:intron | 40.0% | |
| ACATGTGATAATCATTCGCC+AGG | + | tig0035587:5643-5662 | Msa1455100:intergenic | 40.0% | |
| !! | CTCTATGATCTCTGATTTGG+TGG | - | tig0035587:6445-6464 | Msa1455100:intron | 40.0% |
| AAAAGAGAGAATGCCTATGG+TGG | + | tig0035587:6475-6494 | Msa1455100:intergenic | 40.0% | |
| ATATTGCTTTCAGGAAGACG+AGG | - | tig0035587:6707-6726 | Msa1455100:intron | 40.0% | |
| !! | TGTGTTTGGTGCTGATATGA+AGG | - | tig0035587:6866-6885 | Msa1455100:intron | 40.0% |
| TATGAAGGTGAATCCTTCTC+TGG | - | tig0035587:6881-6900 | Msa1455100:intron | 40.0% | |
| TATACGTGGCTGATCTGTAT+AGG | - | tig0035587:6908-6927 | Msa1455100:intron | 40.0% | |
| ATACGTGGCTGATCTGTATA+GGG | - | tig0035587:6909-6928 | Msa1455100:intron | 40.0% | |
| TATGAAGGTGAATCCTTCTC+TGG | - | tig0035587:6881-6900 | Msa1455100:intron | 40.0% | |
| ATGAAGGTGAATCCTTCTCT+GGG | - | tig0035587:6882-6901 | Msa1455100:intron | 40.0% | |
| TATACATGTGGCTGGTACTA+TGG | - | tig0035587:7029-7048 | Msa1455100:CDS | 40.0% | |
| !!! | GCTGGTACTATGGTTTTTTC+TGG | - | tig0035587:7039-7058 | Msa1455100:CDS | 40.0% |
| ! | TCATGAGGTTGCAATTTTGG+TGG | - | tig0035587:7078-7097 | Msa1455100:CDS | 40.0% |
| !! | CATGAGGTTGCAATTTTGGT+GGG | - | tig0035587:7079-7098 | Msa1455100:CDS | 40.0% |
| ACGTTGGCGGTTCAAGAAAT+AGG | - | tig0035587:43-62 | Msa1455100:three_prime_UTR | 45.0% | |
| TGGTGGAAGAGGAAGACAAA+AGG | + | tig0035587:1006-1025 | Msa1455100:intergenic | 45.0% | |
| ATATGAGAGGAAGGAGATGG+TGG | + | tig0035587:1023-1042 | Msa1455100:intergenic | 45.0% | |
| GAAAAAGCCGGAGTCTATCA+TGG | + | tig0035587:2191-2210 | Msa1455100:intergenic | 45.0% | |
| ! | TTTTAGCCCGTTCATCATCC+GGG | + | tig0035587:2216-2235 | Msa1455100:intergenic | 45.0% |
| TCGTACGCTAATGGAACACT+GGG | + | tig0035587:2433-2452 | Msa1455100:intergenic | 45.0% | |
| TTCGTACGCTAATGGAACAC+TGG | + | tig0035587:2434-2453 | Msa1455100:intergenic | 45.0% | |
| TTTCAACCTCCAACTTGAGG+GGG | - | tig0035587:2621-2640 | Msa1455100:intron | 45.0% | |
| CTCAGCTTATGGAGAGCTAT+TGG | + | tig0035587:2662-2681 | Msa1455100:intergenic | 45.0% | |
| CAGTGGCCGAATTCATTATG+GGG | + | tig0035587:3419-3438 | Msa1455100:intergenic | 45.0% | |
| CCAGGCAGTTAAGTTTACAG+TGG | + | tig0035587:3436-3455 | Msa1455100:intergenic | 45.0% | |
| CCACTGTAAACTTAACTGCC+TGG | - | tig0035587:3433-3452 | Msa1455100:intron | 45.0% | |
| TGTCCTGAATGATTCTAGCC+AGG | + | tig0035587:3454-3473 | Msa1455100:intergenic | 45.0% | |
| GGCTAGAATCATTCAGGACA+TGG | - | tig0035587:3454-3473 | Msa1455100:intron | 45.0% | |
| AAAGGATGGTTAGAGTGGAG+CGG | + | tig0035587:3570-3589 | Msa1455100:intergenic | 45.0% | |
| GGCGATGTGGTAAACTCAAA+AGG | + | tig0035587:3588-3607 | Msa1455100:intergenic | 45.0% | |
| GGAATCTTACATAGGCGATG+TGG | + | tig0035587:3601-3620 | Msa1455100:intergenic | 45.0% | |
| ! | TTTTCCTCCTTGAGCTGTGA+TGG | - | tig0035587:3755-3774 | Msa1455100:intron | 45.0% |
| !! | GTGATGGTGTTGCTTTGTTC+TGG | - | tig0035587:3771-3790 | Msa1455100:intron | 45.0% |
| !!! | GCAGTTTTGGAATACAGCAG+TGG | - | tig0035587:3818-3837 | Msa1455100:intron | 45.0% |
| GGCATTCCCTATAGAATTGG+CGG | - | tig0035587:3877-3896 | Msa1455100:intron | 45.0% | |
| !!! | GTGTGGGATTTTTGGCTATC+AGG | + | tig0035587:3925-3944 | Msa1455100:intergenic | 45.0% |
| GATAGCCAAAAATCCCACAC+CGG | - | tig0035587:3925-3944 | Msa1455100:intron | 45.0% | |
| ! | TTCTACCGGTGTGGGATTTT+TGG | + | tig0035587:3933-3952 | Msa1455100:intergenic | 45.0% |
| AGAATACAGACCGGTCAGAT+TGG | - | tig0035587:3949-3968 | Msa1455100:intron | 45.0% | |
| GAATACAGACCGGTCAGATT+GGG | - | tig0035587:3950-3969 | Msa1455100:intron | 45.0% | |
| ! | TTCTAGGGATGATACTGGCA+AGG | - | tig0035587:4802-4821 | Msa1455100:intron | 45.0% |
| ATTCCCAAATGGCATTTCCC+AGG | - | tig0035587:4880-4899 | Msa1455100:intron | 45.0% | |
| TTCCCAAATGGCATTTCCCA+GGG | - | tig0035587:4881-4900 | Msa1455100:intron | 45.0% | |
| ! | ATCCCTGGGAAATGCCATTT+GGG | + | tig0035587:4886-4905 | Msa1455100:intergenic | 45.0% |
| ! | TTTCCCAGGGATGGTTCTAT+CGG | - | tig0035587:4894-4913 | Msa1455100:intron | 45.0% |
| !! | TTTGTGAAGGTGCTATTGGC+AGG | - | tig0035587:4921-4940 | Msa1455100:intron | 45.0% |
| TCATAATTGGACGTGTGTGG+AGG | - | tig0035587:5153-5172 | Msa1455100:CDS | 45.0% | |
| AATTGTCCACCACAATGTGG+TGG | - | tig0035587:5187-5206 | Msa1455100:intron | 45.0% | |
| CAACCTAAACCACCACATTG+TGG | + | tig0035587:5199-5218 | Msa1455100:intergenic | 45.0% | |
| GTTGAGTGTGAACTCGGAAA+GGG | - | tig0035587:5215-5234 | Msa1455100:intron | 45.0% | |
| ACGACTAATTCCCACAGTTC+TGG | + | tig0035587:5242-5261 | Msa1455100:intergenic | 45.0% | |
| ! | ATTTGGTGGAAGACCACCAT+AGG | - | tig0035587:6459-6478 | Msa1455100:intron | 45.0% |
| TTTCAGGAAGACGAGGAACA+TGG | - | tig0035587:6714-6733 | Msa1455100:intron | 45.0% | |
| CCACGTATATACACCAGAGA+AGG | + | tig0035587:6897-6916 | Msa1455100:intergenic | 45.0% | |
| CCTTCTCTGGTGTATATACG+TGG | - | tig0035587:6894-6913 | Msa1455100:intron | 45.0% | |
| ! | AGTGTTTGGGGAAGGTATGA+AGG | - | tig0035587:6989-7008 | Msa1455100:intron | 45.0% |
| TGAAGGTGAATCCTTCTCTG+GGG | - | tig0035587:6883-6902 | Msa1455100:intron | 45.0% | |
| !!! | TTATTATTTTTTCATTTTTT+TGG | - | tig0035587:353-372 | Msa1455100:three_prime_UTR | 5.0% |
| !! | AAAAAATAAAAAATATGTTA+GGG | + | tig0035587:971-990 | Msa1455100:intergenic | 5.0% |
| !! | AAAAAAATAAAAAATATGTT+AGG | + | tig0035587:972-991 | Msa1455100:intergenic | 5.0% |
| !! | AAAAAAAATTGTAAATATAT+GGG | + | tig0035587:1334-1353 | Msa1455100:intergenic | 5.0% |
| !! | TAAAAAAAATTGTAAATATA+TGG | + | tig0035587:1335-1354 | Msa1455100:intergenic | 5.0% |
| !!! | TAAAATATTAATAGAATTTT+AGG | - | tig0035587:1562-1581 | Msa1455100:three_prime_UTR | 5.0% |
| TCAGTTCCAACAGACGTTGG+CGG | - | tig0035587:30-49 | Msa1455100:three_prime_UTR | 50.0% | |
| TGGCTTCTGCGCTAGCATTT+GGG | + | tig0035587:84-103 | Msa1455100:intergenic | 50.0% | |
| !! | AGGTGTTGCTCAACCACCAT+TGG | + | tig0035587:299-318 | Msa1455100:intergenic | 50.0% |
| !! | GGCAACGTAACGGATACAAG+AGG | + | tig0035587:1675-1694 | Msa1455100:intergenic | 50.0% |
| ! | TTTTCGGCCCGGATGATGAA+CGG | - | tig0035587:2206-2225 | Msa1455100:CDS | 50.0% |
| GAAAACCTGTGGCCTGCAAA+GGG | + | tig0035587:2258-2277 | Msa1455100:intergenic | 50.0% | |
| GGAACACTGGGTTTGCGATT+TGG | + | tig0035587:2421-2440 | Msa1455100:intergenic | 50.0% | |
| CAGCTAACTGGCCATGAGAA+GGG | + | tig0035587:2530-2549 | Msa1455100:intergenic | 50.0% | |
| TCAGCTAACTGGCCATGAGA+AGG | + | tig0035587:2531-2550 | Msa1455100:intergenic | 50.0% | |
| CAGAACAGGGAGAGAACTCT+TGG | + | tig0035587:2562-2581 | Msa1455100:intergenic | 50.0% | |
| CAAGTATGATCCCCAAGTCC+AGG | - | tig0035587:3357-3376 | Msa1455100:intron | 50.0% | |
| TACCGTTCACTCCTGGACTT+GGG | + | tig0035587:3371-3390 | Msa1455100:intergenic | 50.0% | |
| ACACATGTACCGTTCACTCC+TGG | + | tig0035587:3378-3397 | Msa1455100:intergenic | 50.0% | |
| CTGCCTGGCTAGAATCATTC+AGG | - | tig0035587:3448-3467 | Msa1455100:intron | 50.0% | |
| AAAACTATGGGCCAGGAGCA+GGG | + | tig0035587:3509-3528 | Msa1455100:intergenic | 50.0% | |
| AAAAACTATGGGCCAGGAGC+AGG | + | tig0035587:3510-3529 | Msa1455100:intergenic | 50.0% | |
| ATGGCTTCCATGGTCTTCCT+AGG | - | tig0035587:3640-3659 | Msa1455100:intron | 50.0% | |
| CAACGTTCCTAGGAAGACCA+TGG | + | tig0035587:3650-3669 | Msa1455100:intergenic | 50.0% | |
| TGGTCTTCCTAGGAACGTTG+AGG | - | tig0035587:3650-3669 | Msa1455100:intron | 50.0% | |
| AACACCATCACAGCTCAAGG+AGG | + | tig0035587:3762-3781 | Msa1455100:intergenic | 50.0% | |
| AGCAACACCATCACAGCTCA+AGG | + | tig0035587:3765-3784 | Msa1455100:intergenic | 50.0% | |
| ! | GGCACGGTGGACTTTATCTT+CGG | + | tig0035587:3849-3868 | Msa1455100:intergenic | 50.0% |
| GGAATGCCAAATCAGTGGCA+CGG | + | tig0035587:3865-3884 | Msa1455100:intergenic | 50.0% | |
| GGTCTGTATTCTACCGGTGT+GGG | + | tig0035587:3941-3960 | Msa1455100:intergenic | 50.0% | |
| CACACCGGTAGAATACAGAC+CGG | - | tig0035587:3940-3959 | Msa1455100:intron | 50.0% | |
| CTGACCGGTCTGTATTCTAC+CGG | + | tig0035587:3947-3966 | Msa1455100:intergenic | 50.0% | |
| !! | CTCTGAGATCCCAATCTGAC+CGG | + | tig0035587:3962-3981 | Msa1455100:intergenic | 50.0% |
| TCGCGCGTGACATTTCCTTT+AGG | + | tig0035587:4019-4038 | Msa1455100:intergenic | 50.0% | |
| ATGTTAGGTGTCAAAGGCCC+AGG | + | tig0035587:4047-4066 | Msa1455100:intergenic | 50.0% | |
| CATCCCTGGGAAATGCCATT+TGG | + | tig0035587:4887-4906 | Msa1455100:intergenic | 50.0% | |
| CAAATGGCATTTCCCAGGGA+TGG | - | tig0035587:4885-4904 | Msa1455100:intron | 50.0% | |
| AGACCGATAGAACCATCCCT+GGG | + | tig0035587:4900-4919 | Msa1455100:intergenic | 50.0% | |
| AAGACCGATAGAACCATCCC+TGG | + | tig0035587:4901-4920 | Msa1455100:intergenic | 50.0% | |
| TAATTGGACGTGTGTGGAGG+AGG | - | tig0035587:5156-5175 | Msa1455100:CDS | 50.0% | |
| CCTAAACCACCACATTGTGG+TGG | + | tig0035587:5196-5215 | Msa1455100:intergenic | 50.0% | |
| CCACCACAATGTGGTGGTTT+AGG | - | tig0035587:5193-5212 | Msa1455100:intron | 50.0% | |
| GGTTGAGTGTGAACTCGGAA+AGG | - | tig0035587:5214-5233 | Msa1455100:intron | 50.0% | |
| ! | AAACACGGGCTGTGAGTGTT+TGG | - | tig0035587:6975-6994 | Msa1455100:intron | 50.0% |
| ! | AACACGGGCTGTGAGTGTTT+GGG | - | tig0035587:6976-6995 | Msa1455100:intron | 50.0% |
| CCACATGTATACCCCAGAGA+AGG | + | tig0035587:7020-7039 | Msa1455100:intergenic | 50.0% | |
| !! | CCTTCTCTGGGGTATACATG+TGG | - | tig0035587:7017-7036 | Msa1455100:CDS | 50.0% |
| CTTGAACCGCCAACGTCTGT+TGG | + | tig0035587:39-58 | Msa1455100:intergenic | 55.0% | |
| CTGGCTTCTGCGCTAGCATT+TGG | + | tig0035587:85-104 | Msa1455100:intergenic | 55.0% | |
| !! | GAGGAAGGAGATGGTGGAAG+AGG | + | tig0035587:1017-1036 | Msa1455100:intergenic | 55.0% |
| ! | GGCTAGCCCATGATAGACTC+CGG | - | tig0035587:2181-2200 | Msa1455100:CDS | 55.0% |
| ATCATCCGGGCCGAAAAAGC+CGG | + | tig0035587:2203-2222 | Msa1455100:intergenic | 55.0% | |
| TTTCGGCCCGGATGATGAAC+GGG | - | tig0035587:2207-2226 | Msa1455100:CDS | 55.0% | |
| CGAAAACCTGTGGCCTGCAA+AGG | + | tig0035587:2259-2278 | Msa1455100:intergenic | 55.0% | |
| AACCTCCAACTTGAGGGGGA+GGG | - | tig0035587:2625-2644 | Msa1455100:intron | 55.0% | |
| TCCCCAAGTCCAGGAGTGAA+CGG | - | tig0035587:3366-3385 | Msa1455100:intron | 55.0% | |
| ACCGTTCACTCCTGGACTTG+GGG | + | tig0035587:3370-3389 | Msa1455100:intergenic | 55.0% | |
| GTACCGTTCACTCCTGGACT+TGG | + | tig0035587:3372-3391 | Msa1455100:intergenic | 55.0% | |
| ! | CTGTTTTGTGTCCCTGCTCC+TGG | - | tig0035587:3495-3514 | Msa1455100:intron | 55.0% |
| GTGGAGCGGATCCCAAAACT+TGG | + | tig0035587:3556-3575 | Msa1455100:intergenic | 55.0% | |
| ! | AGTCCACCGTGCCACTGATT+TGG | - | tig0035587:3856-3875 | Msa1455100:intron | 55.0% |
| ATGCCAAATCAGTGGCACGG+TGG | + | tig0035587:3862-3881 | Msa1455100:intergenic | 55.0% | |
| CGGTCTGTATTCTACCGGTG+TGG | + | tig0035587:3942-3961 | Msa1455100:intergenic | 55.0% | |
| ! | GCGACTGCTTGGTGACCTAT+AGG | - | tig0035587:3981-4000 | Msa1455100:intron | 55.0% |
| ATGTCACGCGCGATGAATCC+TGG | - | tig0035587:4026-4045 | Msa1455100:intron | 55.0% | |
| TGTCACGCGCGATGAATCCT+GGG | - | tig0035587:4027-4046 | Msa1455100:intron | 55.0% | |
| TCGGAAAGGGACCAGAACTG+TGG | - | tig0035587:5228-5247 | Msa1455100:intron | 55.0% | |
| CGGAAAGGGACCAGAACTGT+GGG | - | tig0035587:5229-5248 | Msa1455100:intron | 55.0% | |
| ! | GTGGGCTGTGTGTGTGTGTT+TGG | - | tig0035587:6852-6871 | Msa1455100:intron | 55.0% |
| ! | ACACGGGCTGTGAGTGTTTG+GGG | - | tig0035587:6977-6996 | Msa1455100:intron | 55.0% |
| !! | CTCTGGGGTATACATGTGGC+TGG | - | tig0035587:7021-7040 | Msa1455100:CDS | 55.0% |
| !!! | AGACTCCGGCTTTTTCGGCC+CGG | - | tig0035587:2195-2214 | Msa1455100:CDS | 60.0% |
| CAACCTCCAACTTGAGGGGG+AGG | - | tig0035587:2624-2643 | Msa1455100:intron | 60.0% | |
| ACCTCCAACTTGAGGGGGAG+GGG | - | tig0035587:2626-2645 | Msa1455100:intron | 60.0% | |
| TTACCCCCTCCCCCTCAAGT+TGG | + | tig0035587:2633-2652 | Msa1455100:intergenic | 60.0% | |
| GGGATCTCAGAGCGACTGCT+TGG | - | tig0035587:3970-3989 | Msa1455100:intron | 60.0% | |
| TTGGACGTGTGTGGAGGAGG+AGG | - | tig0035587:5159-5178 | Msa1455100:CDS | 60.0% | |
| GGGCTGTGAGTGTTTGGGGA+AGG | - | tig0035587:6981-7000 | Msa1455100:intron | 60.0% | |
| GTCTAAGCCCGGCCCTTTGC+AGG | - | tig0035587:2243-2262 | Msa1455100:CDS | 65.0% | |
| ACCTGTGGCCTGCAAAGGGC+CGG | + | tig0035587:2254-2273 | Msa1455100:intergenic | 65.0% | |
| CCTCCAACTTGAGGGGGAGG+GGG | - | tig0035587:2627-2646 | Msa1455100:intron | 65.0% | |
| CCTGTGGCCTGCAAAGGGCC+GGG | + | tig0035587:2253-2272 | Msa1455100:intergenic | 70.0% | |
| !! | CCCCCTCCCCCTCAAGTTGG+AGG | + | tig0035587:2630-2649 | Msa1455100:intergenic | 70.0% |
| CCCGGCCCTTTGCAGGCCAC+AGG | - | tig0035587:2250-2269 | Msa1455100:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0035587 | gene | 10 | 7126 | 10 | ID=Msa1455100;Name=Msa1455100 |
| tig0035587 | mRNA | 10 | 7126 | 10 | ID=Msa1455100-mRNA-1;Parent=Msa1455100;Name=Msa1455100-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|0|0.33|0.66|0.5|0.66|3|2081|147 |
| tig0035587 | exon | 10 | 2355 | 10 | ID=Msa1455100-mRNA-1:exon:20134;Parent=Msa1455100-mRNA-1 |
| tig0035587 | exon | 5143 | 5188 | 5143 | ID=Msa1455100-mRNA-1:exon:20133;Parent=Msa1455100-mRNA-1 |
| tig0035587 | exon | 6994 | 7126 | 6994 | ID=Msa1455100-mRNA-1:exon:20132;Parent=Msa1455100-mRNA-1 |
| tig0035587 | CDS | 6994 | 7126 | 6994 | ID=Msa1455100-mRNA-1:cds;Parent=Msa1455100-mRNA-1 |
| tig0035587 | CDS | 5143 | 5188 | 5143 | ID=Msa1455100-mRNA-1:cds;Parent=Msa1455100-mRNA-1 |
| tig0035587 | CDS | 2091 | 2355 | 2091 | ID=Msa1455100-mRNA-1:cds;Parent=Msa1455100-mRNA-1 |
| tig0035587 | three_prime_UTR | 10 | 2090 | 10 | ID=Msa1455100-mRNA-1:three_prime_utr;Parent=Msa1455100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
