AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0291400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291400 MtrunA17_Chr2g0311221 95.280 339 4 3 1 337 1 329 0.0 638
Msa0291400 MtrunA17_Chr1g0187761 73.554 121 32 0 5 125 3 123 1.51e-61 197
Msa0291400 MtrunA17_Chr1g0167691 48.661 224 84 4 5 200 3 223 2.31e-61 196
Msa0291400 MtrunA17_Chr3g0115821 70.690 116 34 0 4 119 2 117 1.44e-60 197
Msa0291400 MtrunA17_Chr6g0453471 48.131 214 102 4 4 216 2 207 4.18e-60 196
Msa0291400 MtrunA17_Chr7g0261281 59.589 146 53 1 4 143 2 147 4.27e-60 194
Msa0291400 MtrunA17_Chr7g0274581 53.939 165 68 2 7 171 5 161 1.16e-59 190
Msa0291400 MtrunA17_Chr4g0039971 72.414 116 32 0 4 119 3 118 1.42e-59 195
Msa0291400 MtrunA17_Chr1g0167661 53.631 179 74 1 5 174 3 181 4.09e-59 191
Msa0291400 MtrunA17_Chr4g0048511 71.795 117 32 1 4 119 2 118 6.03e-59 193
Msa0291400 MtrunA17_Chr4g0042671 60.870 138 54 0 4 141 2 139 1.85e-58 194
Msa0291400 MtrunA17_Chr2g0281071 70.085 117 34 1 4 119 2 118 9.91e-58 190
Msa0291400 MtrunA17_Chr2g0323411 68.966 116 36 0 4 119 2 117 5.11e-57 187
Msa0291400 MtrunA17_Chr1g0203411 67.826 115 37 0 4 118 2 116 2.29e-56 185
Msa0291400 MtrunA17_Chr7g0217741 63.793 116 42 0 4 119 2 117 2.33e-55 182
Msa0291400 MtrunA17_Chr4g0037141 56.849 146 63 0 4 149 2 147 4.41e-55 181
Msa0291400 MtrunA17_Chr5g0410961 68.103 116 37 0 4 119 2 117 4.91e-55 183
Msa0291400 MtrunA17_Chr7g0228891 70.435 115 34 0 4 118 2 116 1.54e-54 179
Msa0291400 MtrunA17_Chr2g0323351 61.069 131 51 0 5 135 3 133 1.72e-54 179
Msa0291400 MtrunA17_Chr4g0057031 68.966 116 36 0 4 119 2 117 9.12e-54 177
Msa0291400 MtrunA17_Chr7g0217221 63.934 122 42 1 4 125 2 121 9.25e-54 177
Msa0291400 MtrunA17_Chr3g0131121 55.944 143 58 1 4 146 2 139 3.49e-53 177
Msa0291400 MtrunA17_Chr7g0270891 66.102 118 40 0 4 121 2 119 3.88e-53 179
Msa0291400 MtrunA17_Chr5g0395281 67.826 115 37 0 5 119 3 117 5.29e-53 176
Msa0291400 MtrunA17_Chr8g0349261 65.546 119 39 2 4 120 2 120 6.08e-53 176
Msa0291400 MtrunA17_Chr7g0254411 51.875 160 64 2 4 163 2 148 6.15e-53 177
Msa0291400 MtrunA17_Chr2g0309911 65.179 112 39 0 8 119 5 116 6.32e-53 176
Msa0291400 MtrunA17_Chr1g0193801 64.407 118 42 0 4 121 2 119 1.23e-52 178
Msa0291400 MtrunA17_Chr8g0385321 66.957 115 38 0 4 118 2 116 1.47e-52 176
Msa0291400 MtrunA17_Chr7g0275911 63.478 115 42 0 4 118 2 116 2.09e-52 173
Msa0291400 MtrunA17_Chr2g0330041 52.229 157 73 1 4 158 2 158 2.57e-52 177
Msa0291400 MtrunA17_Chr3g0110351 67.826 115 37 0 4 118 2 116 4.18e-52 174
Msa0291400 MtrunA17_Chr3g0092401 58.915 129 51 1 5 133 4 130 4.46e-52 174
Msa0291400 MtrunA17_Chr4g0060721 58.730 126 50 1 4 129 3 126 4.67e-52 175
Msa0291400 MtrunA17_Chr3g0103281 65.217 115 40 0 4 118 2 116 6.44e-52 174
Msa0291400 MtrunA17_Chr8g0346561 64.348 115 41 0 4 118 2 116 7.71e-52 173
Msa0291400 MtrunA17_Chr4g0022911 52.761 163 69 4 4 162 2 160 8.06e-52 173
Msa0291400 MtrunA17_Chr5g0434571 67.826 115 37 0 4 118 38 152 8.96e-52 175
Msa0291400 MtrunA17_Chr4g0022931 64.655 116 40 1 4 118 2 117 1.06e-51 172
Msa0291400 MtrunA17_Chr4g0022901 64.103 117 41 1 4 119 2 118 2.42e-51 171
Msa0291400 MtrunA17_Chr1g0193371 64.348 115 41 0 4 118 2 116 2.91e-51 174
Msa0291400 MtrunA17_Chr1g0151941 55.245 143 60 2 4 142 2 144 3.03e-51 170
Msa0291400 MtrunA17_Chr8g0342541 60.169 118 47 0 4 121 2 119 5.96e-51 172
Msa0291400 MtrunA17_Chr1g0194951 65.217 115 40 0 4 118 2 116 6.90e-51 173
Msa0291400 MtrunA17_Chr6g0452271 63.793 116 42 0 4 119 2 117 7.75e-51 172
Msa0291400 MtrunA17_Chr4g0058631 63.793 116 42 0 4 119 2 117 9.02e-51 172
Msa0291400 MtrunA17_Chr4g0068061 62.393 117 44 0 4 120 2 118 9.49e-51 172
Msa0291400 MtrunA17_Chr8g0342521 62.069 116 44 0 4 119 2 117 1.41e-50 171
Msa0291400 MtrunA17_Chr5g0435101 48.466 163 77 3 5 162 2 162 1.56e-49 164
Msa0291400 MtrunA17_Chr4g0022891 53.896 154 70 1 5 157 3 156 3.45e-49 164
Msa0291400 MtrunA17_Chr4g0070611 43.169 183 101 2 4 185 2 182 3.64e-49 166
Msa0291400 MtrunA17_Chr5g0400821 60.000 120 47 1 4 122 2 121 5.01e-49 166
Msa0291400 MtrunA17_Chr1g0152011 56.589 129 55 1 4 131 2 130 5.19e-49 167
Msa0291400 MtrunA17_Chr8g0387421 60.870 115 45 0 4 118 2 116 7.32e-49 166
Msa0291400 MtrunA17_Chr4g0022881 54.545 143 58 1 5 147 3 138 7.64e-49 163
Msa0291400 MtrunA17_Chr4g0028311 61.864 118 44 1 4 120 2 119 8.02e-49 166
Msa0291400 MtrunA17_Chr3g0135311 62.185 119 44 1 4 121 2 120 1.36e-48 166
Msa0291400 MtrunA17_Chr4g0070641 61.739 115 44 0 4 118 2 116 1.46e-48 160
Msa0291400 MtrunA17_Chr1g0211161 62.609 115 43 0 5 119 4 118 1.77e-48 162
Msa0291400 MtrunA17_Chr3g0117091 62.069 116 44 0 4 119 2 117 2.05e-48 166
Msa0291400 MtrunA17_Chr7g0271241 64.815 108 38 0 4 111 2 109 2.50e-48 166
Msa0291400 MtrunA17_Chr3g0121241 40.865 208 121 1 7 214 35 240 3.47e-48 164
Msa0291400 MtrunA17_Chr8g0342481 59.829 117 46 1 4 119 2 118 1.08e-47 165
Msa0291400 MtrunA17_Chr6g0453211 60.550 109 43 0 5 113 3 111 1.29e-47 163
Msa0291400 MtrunA17_Chr5g0397231 62.385 109 41 0 4 112 2 110 2.74e-47 162
Msa0291400 MtrunA17_Chr5g0417821 64.151 106 38 0 14 119 7 112 2.85e-47 161
Msa0291400 MtrunA17_Chr4g0054391 64.220 109 38 1 4 111 2 110 2.86e-46 159
Msa0291400 MtrunA17_Chr7g0264641 58.120 117 48 1 4 119 2 118 2.89e-46 158
Msa0291400 MtrunA17_Chr6g0470971 51.678 149 70 1 1 149 1 147 5.10e-46 157
Msa0291400 MtrunA17_Chr4g0044421 48.000 175 85 3 5 173 2 176 1.09e-45 154
Msa0291400 MtrunA17_Chr2g0327351 60.909 110 42 1 4 112 2 111 1.10e-45 158
Msa0291400 MtrunA17_Chr6g0487491 50.993 151 65 2 4 145 2 152 4.41e-45 154
Msa0291400 MtrunA17_Chr7g0269831 60.163 123 49 0 4 126 2 124 1.00e-44 156
Msa0291400 MtrunA17_Chr4g0072751 60.000 110 43 1 4 112 2 111 3.67e-44 155
Msa0291400 MtrunA17_Chr1g0203441 61.468 109 42 0 11 119 10 118 9.69e-44 151
Msa0291400 MtrunA17_Chr4g0032401 50.000 152 64 3 13 152 16 167 9.72e-44 153
Msa0291400 MtrunA17_Chr3g0088461 61.468 109 42 0 10 118 18 126 2.68e-43 152
Msa0291400 MtrunA17_Chr4g0042611 64.368 87 31 0 4 90 2 88 7.25e-43 143
Msa0291400 MtrunA17_Chr2g0328771 56.410 117 51 0 14 130 20 136 4.86e-42 148
Msa0291400 MtrunA17_Chr1g0154031 61.538 104 40 0 14 117 76 179 7.05e-42 150
Msa0291400 MtrunA17_Chr8g0354661 61.538 104 40 0 14 117 37 140 1.16e-41 152
Msa0291400 MtrunA17_Chr4g0055981 46.667 150 73 1 11 160 52 194 5.26e-41 143
Msa0291400 MtrunA17_Chr7g0228231 55.372 121 49 2 9 126 6 124 5.32e-41 142
Msa0291400 MtrunA17_Chr3g0080861 57.692 104 44 0 14 117 37 140 5.96e-41 150
Msa0291400 MtrunA17_Chr1g0180391 56.757 111 48 0 14 124 19 129 1.95e-40 141
Msa0291400 MtrunA17_Chr2g0327821 48.889 135 67 1 13 145 5 139 6.25e-40 140
Msa0291400 MtrunA17_Chr6g0450101 55.752 113 47 1 9 118 6 118 7.57e-40 139
Msa0291400 MtrunA17_Chr3g0099131 56.604 106 46 0 12 117 39 144 3.45e-39 145
Msa0291400 MtrunA17_Chr1g0209661 53.704 108 50 0 10 117 23 130 9.89e-39 139
Msa0291400 MtrunA17_Chr7g0240821 58.416 101 42 0 18 118 5 105 6.62e-38 135
Msa0291400 MtrunA17_Chr1g0186061 57.282 103 44 0 15 117 21 123 1.27e-37 135
Msa0291400 MtrunA17_Chr5g0434911 50.442 113 56 0 9 121 16 128 1.88e-37 135
Msa0291400 MtrunA17_Chr5g0434931 51.852 108 52 0 14 121 35 142 2.57e-37 135
Msa0291400 MtrunA17_Chr2g0322521 57.009 107 46 0 11 117 26 132 2.95e-37 137
Msa0291400 MtrunA17_Chr4g0030881 50.420 119 52 1 15 126 8 126 3.16e-37 134
Msa0291400 MtrunA17_Chr1g0168661 57.282 103 44 0 15 117 22 124 3.91e-37 134
Msa0291400 MtrunA17_Chr1g0194291 51.304 115 56 0 3 117 10 124 5.62e-37 134
Msa0291400 MtrunA17_Chr7g0220341 53.097 113 51 1 14 124 25 137 1.73e-36 132
Msa0291400 MtrunA17_Chr8g0343831 55.660 106 47 0 13 118 7 112 2.30e-36 132
Msa0291400 MtrunA17_Chr8g0342511 62.791 86 32 0 4 89 2 87 2.97e-36 126
Msa0291400 MtrunA17_Chr4g0068921 56.075 107 47 0 10 116 20 126 5.39e-36 129
Msa0291400 MtrunA17_Chr5g0434841 36.000 250 131 6 14 253 20 250 5.70e-36 132
Msa0291400 MtrunA17_Chr2g0293911 57.009 107 46 0 10 116 20 126 6.76e-36 132
Msa0291400 MtrunA17_Chr8g0342531 59.341 91 37 0 8 98 6 96 2.28e-35 126
Msa0291400 MtrunA17_Chr1g0194301 50.926 108 53 0 10 117 29 136 2.91e-35 129
Msa0291400 MtrunA17_Chr7g0247131 73.973 73 19 0 46 118 10 82 6.03e-35 128
Msa0291400 MtrunA17_Chr2g0323321 61.111 90 34 1 5 94 3 91 6.56e-35 123
Msa0291400 MtrunA17_Chr5g0434831 42.073 164 88 2 14 170 7 170 2.42e-34 124
Msa0291400 MtrunA17_Chr7g0228991 50.926 108 53 0 14 121 29 136 2.60e-34 127
Msa0291400 MtrunA17_Chr8g0342471 63.529 85 30 1 8 91 6 90 1.15e-33 121
Msa0291400 MtrunA17_Chr8g0334881 51.852 108 51 1 10 116 6 113 2.15e-33 125
Msa0291400 MtrunA17_Chr8g0342461 62.353 85 31 1 8 91 6 90 2.36e-33 120
Msa0291400 MtrunA17_Chr2g0294811 59.770 87 35 0 4 90 2 88 4.04e-33 119
Msa0291400 MtrunA17_Chr1g0192411 51.852 108 52 0 10 117 8 115 5.68e-33 126
Msa0291400 MtrunA17_Chr8g0360111 50.495 101 50 0 14 114 25 125 1.75e-32 121
Msa0291400 MtrunA17_Chr5g0395221 62.353 85 32 0 6 90 4 88 1.03e-31 114
Msa0291400 MtrunA17_Chr4g0013361 48.148 108 55 1 10 116 6 113 1.04e-30 117
Msa0291400 MtrunA17_Chr5g0440781 50.000 106 52 1 12 116 10 115 1.50e-30 114
Msa0291400 MtrunA17_Chr3g0099141 54.023 87 40 0 10 96 36 122 1.53e-30 113
Msa0291400 MtrunA17_Chr5g0440761 50.000 106 52 1 12 116 10 115 3.25e-30 115
Msa0291400 MtrunA17_Chr5g0441141 50.000 106 52 1 12 116 10 115 3.65e-30 115
Msa0291400 MtrunA17_Chr5g0401731 40.385 156 89 2 16 168 15 169 9.09e-30 116
Msa0291400 MtrunA17_Chr5g0441131 50.962 104 50 1 14 116 9 112 2.55e-29 111
Msa0291400 MtrunA17_Chr6g0454921 52.941 102 47 1 16 117 15 115 8.61e-29 110
Msa0291400 MtrunA17_Chr4g0008551 47.899 119 58 2 16 134 38 152 1.94e-28 112
Msa0291400 MtrunA17_Chr4g0053431 37.791 172 84 3 16 169 5 171 2.75e-28 110
Msa0291400 MtrunA17_Chr5g0417621 37.107 159 84 3 12 155 130 287 1.63e-27 112
Msa0291400 MtrunA17_Chr6g0480581 48.515 101 51 1 16 116 4 103 7.84e-27 106
Msa0291400 MtrunA17_Chr4g0042501 39.855 138 79 3 14 150 103 237 5.44e-26 107
Msa0291400 MtrunA17_Chr6g0460671 48.039 102 52 1 16 117 99 199 1.72e-25 105
Msa0291400 MtrunA17_Chr3g0133601 46.078 102 54 1 16 117 37 137 2.10e-25 102
Msa0291400 MtrunA17_Chr7g0238631 47.170 106 55 1 13 118 110 214 2.28e-25 106
Msa0291400 MtrunA17_Chr3g0125801 48.624 109 53 2 10 117 10 116 4.15e-25 102
Msa0291400 MtrunA17_Chr7g0229101 58.571 70 29 0 46 115 4 73 7.77e-25 100
Msa0291400 MtrunA17_Chr7g0229131 48.810 84 43 0 46 129 4 87 8.36e-25 99.0
Msa0291400 MtrunA17_Chr5g0429661 32.979 188 113 5 4 179 109 295 4.86e-24 100
Msa0291400 MtrunA17_Chr6g0460661 37.410 139 69 4 16 153 16 137 6.78e-24 96.3
Msa0291400 MtrunA17_Chr1g0157731 39.259 135 79 2 13 147 88 219 1.10e-23 102
Msa0291400 MtrunA17_Chr3g0139671 43.689 103 57 1 16 118 85 186 4.02e-23 100
Msa0291400 MtrunA17_Chr3g0139671 36.000 100 62 2 16 114 33 131 5.32e-13 70.1
Msa0291400 MtrunA17_Chr5g0434901 57.353 68 29 0 48 115 7 74 5.54e-23 92.4
Msa0291400 MtrunA17_Chr5g0425591 51.807 83 39 1 14 95 9 91 6.85e-23 91.3
Msa0291400 MtrunA17_Chr7g0254261 39.161 143 78 3 16 150 89 230 1.37e-22 97.1
Msa0291400 MtrunA17_Chr6g0453751 50.549 91 36 2 14 95 20 110 2.28e-22 91.3
Msa0291400 MtrunA17_Chr5g0437321 45.455 99 53 1 16 114 19 116 6.97e-22 94.0
Msa0291400 MtrunA17_Chr7g0228531 37.324 142 83 3 14 151 218 357 8.67e-22 95.5
Msa0291400 MtrunA17_Chr7g0228401 42.857 105 59 1 8 112 271 374 2.10e-21 94.7
Msa0291400 MtrunA17_Chr4g0058991 39.655 116 67 2 11 125 204 317 3.60e-21 94.0
Msa0291400 MtrunA17_Chr3g0117511 32.402 179 113 3 16 194 183 353 7.30e-21 92.8
Msa0291400 MtrunA17_Chr3g0093811 54.795 73 33 0 46 118 14 86 1.21e-20 90.1
Msa0291400 MtrunA17_Chr5g0397841 45.918 98 51 2 14 111 109 204 6.29e-19 87.4
Msa0291400 MtrunA17_Chr7g0228481 33.548 155 92 4 14 168 218 361 6.45e-19 87.0
Msa0291400 MtrunA17_Chr7g0238651 39.423 104 61 1 16 117 7 110 1.90e-17 82.4
Msa0291400 MtrunA17_Chr1g0177901 43.182 88 49 1 25 112 3 89 2.31e-17 79.7
Msa0291400 MtrunA17_Chr7g0233061 35.593 118 70 2 50 164 211 325 5.50e-16 78.2
Msa0291400 MtrunA17_Chr1g0193901 49.412 85 41 2 13 95 10 94 5.89e-14 67.4
Msa0291400 MtrunA17_Chr1g0193891 49.412 85 41 2 13 95 10 94 5.89e-14 67.4
Msa0291400 MtrunA17_Chr1g0193871 49.412 85 41 2 13 95 10 94 5.89e-14 67.4
Msa0291400 MtrunA17_Chr1g0193881 49.412 85 41 2 13 95 10 94 5.89e-14 67.4
Msa0291400 MtrunA17_Chr5g0416341 36.364 99 62 1 19 117 29 126 1.60e-13 71.2
Msa0291400 MtrunA17_Chr5g0434871 59.091 44 18 0 76 119 2 45 2.89e-13 64.3
Msa0291400 MtrunA17_Chr8g0362231 34.343 99 64 1 19 117 25 122 1.41e-12 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0291400 AT1G79180.1 48.232 311 126 6 1 296 1 291 2.01e-85 259
Msa0291400 AT1G16490.1 46.503 286 98 7 1 276 1 241 4.26e-79 243
Msa0291400 AT1G79180.2 43.605 344 126 7 1 296 1 324 2.39e-78 243
Msa0291400 AT1G56160.1 79.832 119 24 0 1 119 1 119 2.86e-70 221
Msa0291400 AT3G12820.1 77.686 121 27 0 1 121 1 121 1.73e-64 204
Msa0291400 AT3G02940.2 74.138 116 30 0 4 119 2 117 3.24e-63 203
Msa0291400 AT3G23250.1 62.838 148 48 1 4 144 2 149 3.86e-63 202
Msa0291400 AT2G31180.1 73.913 115 30 0 4 118 2 116 1.07e-62 200
Msa0291400 AT3G02940.1 74.138 116 30 0 4 119 2 117 1.13e-62 202
Msa0291400 AT3G02940.3 74.138 116 30 0 4 119 2 117 1.13e-62 202
Msa0291400 AT5G16770.4 73.276 116 31 0 4 119 2 117 2.60e-60 196
Msa0291400 AT5G16770.3 73.276 116 31 0 4 119 2 117 2.60e-60 196
Msa0291400 AT3G01140.2 68.103 116 37 0 4 119 2 117 4.71e-60 196
Msa0291400 AT5G16770.1 73.276 116 31 0 4 119 2 117 7.47e-60 196
Msa0291400 AT5G16770.2 73.276 116 31 0 4 119 2 117 7.47e-60 196
Msa0291400 AT4G21440.1 48.058 206 94 3 4 202 2 201 8.80e-59 193
Msa0291400 AT1G34670.1 69.828 116 35 0 4 119 2 117 2.02e-58 192
Msa0291400 AT5G15310.4 60.000 135 54 0 4 138 2 136 2.71e-58 189
Msa0291400 AT5G15310.1 67.241 116 38 0 4 119 2 117 2.87e-58 191
Msa0291400 AT5G15310.2 67.241 116 38 0 4 119 2 117 3.86e-58 190
Msa0291400 AT1G06180.1 71.304 115 33 0 4 118 2 116 6.21e-58 187
Msa0291400 AT4G28110.1 68.966 116 36 0 4 119 2 117 1.12e-57 188
Msa0291400 AT3G01140.1 67.544 114 37 0 6 119 47 160 1.31e-57 191
Msa0291400 AT5G65230.1 70.690 116 34 0 4 119 2 117 1.51e-57 189
Msa0291400 AT5G10280.1 69.828 116 35 0 4 119 2 117 1.82e-57 189
Msa0291400 AT3G61250.1 67.241 116 38 0 4 119 2 117 7.98e-57 186
Msa0291400 AT4G05100.1 67.521 117 37 1 4 119 2 118 2.15e-56 186
Msa0291400 AT4G12350.1 45.374 227 109 4 4 230 2 213 3.28e-56 184
Msa0291400 AT1G22640.1 58.503 147 56 1 4 150 2 143 2.44e-55 181
Msa0291400 AT4G34990.1 59.574 141 56 1 4 144 2 141 4.95e-55 181
Msa0291400 AT4G17785.2 66.667 117 38 1 4 119 2 118 5.40e-55 183
Msa0291400 AT4G38620.1 59.124 137 56 0 4 140 2 138 5.71e-55 181
Msa0291400 AT4G22680.1 70.690 116 34 0 4 119 2 117 6.11e-55 181
Msa0291400 AT4G17785.1 66.667 117 38 1 4 119 2 118 7.55e-55 183
Msa0291400 AT1G08810.1 49.432 176 86 2 4 179 2 174 3.96e-54 179
Msa0291400 AT2G16720.1 64.407 118 42 0 4 121 2 119 4.17e-54 179
Msa0291400 AT4G09460.1 49.721 179 82 3 4 182 2 172 5.47e-54 177
Msa0291400 AT4G01680.3 64.407 118 42 0 4 121 2 119 7.69e-54 177
Msa0291400 AT5G62470.2 60.145 138 51 2 4 139 2 137 1.40e-53 180
Msa0291400 AT5G16600.1 69.565 115 35 0 4 118 2 116 1.48e-53 179
Msa0291400 AT1G74650.1 63.025 119 44 0 4 122 2 120 2.00e-53 179
Msa0291400 AT1G35515.1 54.054 148 68 0 4 151 2 149 2.14e-53 175
Msa0291400 AT4G01680.1 64.407 118 42 0 4 121 2 119 2.96e-53 178
Msa0291400 AT3G12720.1 42.130 216 120 2 8 218 16 231 6.89e-53 177
Msa0291400 AT3G47600.1 60.630 127 48 1 4 130 2 126 1.04e-52 177
Msa0291400 AT2G47460.1 59.712 139 54 1 4 140 2 140 2.23e-52 177
Msa0291400 AT3G13890.2 62.931 116 43 0 4 119 2 117 9.75e-52 175
Msa0291400 AT5G49330.1 65.217 115 40 0 4 118 2 116 9.90e-52 174
Msa0291400 AT5G54230.1 65.517 116 40 0 4 119 2 117 9.93e-52 174
Msa0291400 AT5G62470.1 60.145 138 50 3 4 139 2 136 1.08e-51 175
Msa0291400 AT1G66230.1 66.957 115 38 0 4 118 2 116 1.45e-51 172
Msa0291400 AT5G14340.1 66.957 115 38 0 4 118 14 128 2.58e-51 171
Msa0291400 AT5G56110.1 64.348 115 41 0 4 118 2 116 2.84e-51 173
Msa0291400 AT3G28910.1 64.035 114 41 0 5 118 3 116 2.88e-51 173
Msa0291400 AT3G13540.1 62.393 117 44 0 3 119 12 128 4.36e-51 170
Msa0291400 AT3G62610.1 65.217 115 40 0 4 118 2 116 4.60e-51 173
Msa0291400 AT5G60890.1 51.875 160 64 2 5 153 3 160 5.47e-51 171
Msa0291400 AT1G74080.1 47.783 203 89 4 5 199 3 196 8.81e-51 172
Msa0291400 AT5G26660.1 63.559 118 43 0 4 121 2 119 9.28e-51 172
Msa0291400 AT1G57560.2 52.349 149 71 0 5 153 3 151 1.43e-50 169
Msa0291400 AT1G57560.1 61.538 117 45 0 5 121 3 119 2.06e-50 170
Msa0291400 AT5G57620.1 55.639 133 58 1 4 135 2 134 3.26e-50 170
Msa0291400 AT1G09540.1 64.348 115 41 0 4 118 2 116 5.46e-50 171
Msa0291400 AT4G01680.2 58.462 130 42 1 4 121 2 131 1.05e-49 169
Msa0291400 AT3G49690.1 61.667 120 45 1 4 122 2 121 1.52e-49 168
Msa0291400 AT5G23000.1 60.684 117 45 1 4 119 2 118 2.04e-49 168
Msa0291400 AT2G36890.1 61.864 118 44 1 4 120 2 119 6.08e-49 166
Msa0291400 AT1G18570.1 61.017 118 45 1 5 121 3 120 9.27e-49 167
Msa0291400 AT3G13890.1 58.400 125 43 1 4 119 2 126 1.03e-48 167
Msa0291400 AT2G36890.2 61.864 118 44 1 4 120 43 160 1.09e-48 167
Msa0291400 AT4G37780.1 59.350 123 49 1 4 125 2 124 1.19e-48 166
Msa0291400 AT5G07690.1 59.829 117 47 0 5 121 3 119 2.33e-48 166
Msa0291400 AT1G63910.1 60.870 115 45 0 4 118 2 116 3.27e-48 166
Msa0291400 AT5G65790.1 60.833 120 46 1 4 122 2 121 5.14e-48 166
Msa0291400 AT5G61420.2 59.130 115 47 0 5 119 3 117 8.77e-48 165
Msa0291400 AT5G62320.1 59.524 126 43 2 1 119 1 125 1.28e-47 161
Msa0291400 AT5G07700.1 57.391 115 49 0 5 119 3 117 1.15e-45 159
Msa0291400 AT5G07700.2 57.391 115 49 0 5 119 3 117 1.15e-45 159
Msa0291400 AT3G28470.1 60.550 109 43 0 4 112 2 110 2.85e-45 157
Msa0291400 AT4G25560.1 62.385 109 41 0 15 123 11 119 3.74e-44 153
Msa0291400 AT1G74430.1 51.493 134 65 0 4 137 2 135 4.01e-43 150
Msa0291400 AT5G14750.1 45.714 175 78 4 13 181 15 178 7.32e-43 147
Msa0291400 AT5G12870.1 61.321 106 41 0 13 118 17 122 3.34e-42 148
Msa0291400 AT5G52260.1 57.031 128 55 0 11 138 9 136 3.63e-42 147
Msa0291400 AT3G48920.1 56.034 116 51 0 11 126 15 130 4.38e-42 147
Msa0291400 AT5G40350.1 47.445 137 71 1 12 148 15 150 7.52e-42 145
Msa0291400 AT3G27810.1 45.946 148 75 1 11 153 17 164 1.36e-41 145
Msa0291400 AT3G08500.1 59.633 109 44 0 10 118 26 134 2.26e-41 147
Msa0291400 AT1G18710.1 55.085 118 53 0 4 121 2 119 2.36e-41 145
Msa0291400 AT5G35550.1 55.085 118 53 0 1 118 1 118 1.07e-40 143
Msa0291400 AT5G40330.1 48.889 135 64 1 13 142 11 145 1.78e-40 142
Msa0291400 AT4G26930.1 59.223 103 42 0 14 116 19 121 1.91e-40 146
Msa0291400 AT5G52600.1 57.944 107 45 0 11 117 9 115 2.50e-40 140
Msa0291400 AT2G32460.1 59.615 104 42 0 14 117 18 121 3.17e-40 147
Msa0291400 AT2G32460.2 59.615 104 42 0 14 117 6 109 3.50e-40 147
Msa0291400 AT5G55020.1 60.952 105 41 0 14 118 26 130 4.49e-40 148
Msa0291400 AT2G26960.1 60.377 106 42 0 11 116 17 122 6.77e-40 145
Msa0291400 AT3G01530.1 50.806 124 55 1 3 120 8 131 8.27e-40 139
Msa0291400 AT5G06100.1 56.481 108 47 0 10 117 28 135 1.38e-39 145
Msa0291400 AT3G27920.1 48.889 135 64 1 13 142 13 147 3.52e-39 139
Msa0291400 AT5G06100.5 56.481 108 47 0 10 117 28 135 3.68e-39 145
Msa0291400 AT5G06100.2 56.481 108 47 0 10 117 28 135 3.68e-39 145
Msa0291400 AT5G06100.3 56.481 108 47 0 10 117 28 135 3.68e-39 145
Msa0291400 AT5G06100.4 56.481 108 47 0 10 117 28 135 3.68e-39 145
Msa0291400 AT3G11440.2 55.140 107 48 0 11 117 38 144 3.89e-39 144
Msa0291400 AT2G47190.1 56.604 106 46 0 12 117 18 123 6.63e-39 139
Msa0291400 AT3G11440.3 55.140 107 48 0 11 117 38 144 1.27e-38 144
Msa0291400 AT3G11440.4 55.140 107 48 0 11 117 38 144 1.27e-38 144
Msa0291400 AT3G11440.1 55.140 107 48 0 11 117 38 144 1.27e-38 144
Msa0291400 AT5G59780.3 52.586 116 55 0 11 126 5 120 1.85e-38 137
Msa0291400 AT1G48000.1 47.899 119 62 0 13 131 31 149 2.57e-38 137
Msa0291400 AT3G46130.1 55.556 108 48 0 15 122 10 117 3.71e-38 137
Msa0291400 AT3G12820.2 84.722 72 11 0 50 121 2 73 6.87e-38 134
Msa0291400 AT3G30210.1 36.916 214 126 4 14 225 27 233 1.19e-37 136
Msa0291400 AT3G24310.1 54.701 117 51 1 15 131 19 133 1.45e-37 135
Msa0291400 AT4G13480.1 59.223 103 42 0 15 117 7 109 3.03e-37 134
Msa0291400 AT1G68320.1 50.427 117 58 0 13 129 18 134 7.01e-37 134
Msa0291400 AT3G06490.1 57.944 107 45 0 10 116 15 121 9.70e-37 135
Msa0291400 AT3G53200.1 55.769 104 46 0 14 117 9 112 1.34e-35 129
Msa0291400 AT1G25340.1 50.943 106 52 0 12 117 16 121 2.31e-35 130
Msa0291400 AT5G49620.1 58.252 103 43 0 14 116 26 128 3.46e-35 130
Msa0291400 AT1G66370.1 43.511 131 70 1 14 144 8 134 3.76e-35 129
Msa0291400 AT5G26660.2 74.026 77 20 0 45 121 12 88 2.44e-34 128
Msa0291400 AT5G14750.3 48.951 143 61 5 41 181 12 144 1.00e-33 122
Msa0291400 AT3G60460.1 50.467 107 52 1 11 116 8 114 3.43e-33 125
Msa0291400 AT5G49620.2 51.282 117 43 1 14 116 26 142 1.49e-31 121
Msa0291400 AT3G47600.2 56.190 105 40 2 26 130 22 120 3.94e-31 120
Msa0291400 AT1G66380.1 51.923 104 50 0 14 117 8 111 1.12e-30 113
Msa0291400 AT1G25340.2 48.113 106 50 1 12 117 16 116 1.25e-30 117
Msa0291400 AT3G27810.2 48.214 112 53 1 47 153 4 115 1.55e-30 114
Msa0291400 AT5G40350.2 51.000 100 48 1 47 146 5 103 1.81e-30 114
Msa0291400 AT1G25340.3 48.113 106 50 1 12 117 16 116 2.30e-30 117
Msa0291400 AT5G35550.2 65.385 78 27 0 41 118 44 121 2.49e-30 116
Msa0291400 AT2G26950.1 50.000 102 51 0 11 112 13 114 3.80e-30 118
Msa0291400 AT1G56650.1 34.375 192 120 1 14 205 8 193 1.25e-29 114
Msa0291400 AT1G66390.1 50.962 104 51 0 14 117 8 111 2.11e-29 113
Msa0291400 AT1G69560.1 49.541 109 52 2 11 118 102 208 1.66e-28 113
Msa0291400 AT3G46130.3 62.338 77 29 0 46 122 9 85 2.28e-28 110
Msa0291400 AT1G69560.2 49.541 109 52 2 11 118 118 224 2.36e-28 113
Msa0291400 AT1G17950.1 50.000 102 50 1 16 117 5 105 2.59e-28 110
Msa0291400 AT5G59780.2 59.756 82 33 0 45 126 18 99 2.95e-28 109
Msa0291400 AT3G46130.4 61.538 78 30 0 45 122 18 95 5.36e-28 109
Msa0291400 AT2G23290.1 53.922 102 46 1 16 117 13 113 7.54e-28 110
Msa0291400 AT5G67300.1 50.980 102 49 1 16 117 6 106 1.79e-27 109
Msa0291400 AT3G53200.2 65.753 73 25 0 45 117 7 79 1.79e-27 107
Msa0291400 AT1G26780.1 46.667 120 59 3 16 134 98 213 3.02e-27 108
Msa0291400 AT4G37260.1 50.943 106 51 1 16 121 13 117 3.06e-27 109
Msa0291400 AT1G26780.2 45.902 122 61 3 14 134 96 213 5.06e-27 109
Msa0291400 AT3G09230.1 41.139 158 71 6 2 148 47 193 5.24e-27 110
Msa0291400 AT4G18770.1 35.762 151 96 1 11 161 212 361 8.24e-27 110
Msa0291400 AT3G23250.2 57.609 92 32 1 60 144 1 92 1.53e-26 105
Msa0291400 AT1G22640.3 60.440 91 31 1 60 150 1 86 3.41e-26 103
Msa0291400 AT3G50060.1 42.105 133 69 2 16 141 6 137 7.22e-26 105
Msa0291400 AT2G39880.1 51.351 111 44 3 11 117 46 150 8.02e-26 106
Msa0291400 AT3G55730.1 50.450 111 45 3 11 117 52 156 3.03e-25 105
Msa0291400 AT3G09370.2 47.059 102 53 1 16 117 135 235 4.96e-25 105
Msa0291400 AT3G09370.1 47.059 102 53 1 16 117 130 230 5.22e-25 105
Msa0291400 AT5G17800.1 46.078 102 54 1 16 117 93 193 7.35e-25 103
Msa0291400 AT3G09370.3 47.059 102 53 1 16 117 143 243 9.82e-25 105
Msa0291400 AT5G02320.1 45.283 106 57 1 13 118 124 228 1.28e-24 104
Msa0291400 AT5G02320.2 45.283 106 57 1 13 118 124 228 1.28e-24 104
Msa0291400 AT5G02320.3 45.283 106 57 1 13 118 64 168 1.29e-24 104
Msa0291400 AT4G33450.1 43.925 107 59 1 11 117 14 119 1.34e-24 100
Msa0291400 AT3G29020.1 35.542 166 91 4 16 166 65 229 1.42e-24 100
Msa0291400 AT1G73410.1 50.485 103 48 2 16 117 6 106 5.37e-24 99.0
Msa0291400 AT4G32730.1 40.441 136 73 2 13 141 84 218 5.75e-24 103
Msa0291400 AT4G32730.1 35.000 100 63 2 16 114 35 133 2.01e-12 68.6
Msa0291400 AT4G32730.5 40.441 136 73 2 13 141 84 218 5.94e-24 103
Msa0291400 AT4G32730.5 35.000 100 63 2 16 114 35 133 2.28e-12 68.6
Msa0291400 AT4G32730.4 40.441 136 73 2 13 141 84 218 5.94e-24 103
Msa0291400 AT4G32730.4 35.000 100 63 2 16 114 35 133 2.28e-12 68.6
Msa0291400 AT4G32730.3 40.441 136 73 2 13 141 84 218 5.94e-24 103
Msa0291400 AT4G32730.3 35.000 100 63 2 16 114 35 133 2.28e-12 68.6
Msa0291400 AT4G32730.2 40.441 136 73 2 13 141 84 218 5.94e-24 103
Msa0291400 AT4G32730.2 35.000 100 63 2 16 114 35 133 2.28e-12 68.6
Msa0291400 AT5G40360.1 36.620 142 86 2 11 149 153 293 5.97e-24 101
Msa0291400 AT5G14750.4 45.968 124 58 4 60 181 1 117 9.02e-24 95.5
Msa0291400 AT5G14750.2 45.968 124 58 4 60 181 1 117 9.02e-24 95.5
Msa0291400 AT1G73410.2 50.485 103 48 2 16 117 6 106 1.42e-23 96.7
Msa0291400 AT3G27785.1 34.021 194 118 4 11 202 184 369 1.59e-23 100
Msa0291400 AT3G29020.2 38.583 127 71 2 16 136 67 192 2.32e-23 98.6
Msa0291400 AT1G66380.3 61.111 72 28 0 46 117 7 78 4.55e-23 92.4
Msa0291400 AT5G58850.1 40.164 122 70 2 16 135 105 225 5.81e-23 99.4
Msa0291400 AT1G18960.1 44.144 111 56 3 8 118 5 109 1.83e-22 96.3
Msa0291400 AT1G71030.1 53.750 80 36 1 40 119 7 85 5.37e-22 92.4
Msa0291400 AT5G39700.1 42.609 115 64 2 11 125 51 163 7.12e-22 91.7
Msa0291400 AT5G11050.1 38.938 113 68 1 14 126 103 214 7.93e-22 95.9
Msa0291400 AT5G11510.3 39.091 110 58 2 13 118 78 182 1.97e-21 95.9
Msa0291400 AT5G11510.3 36.000 100 62 2 16 114 29 127 5.41e-12 67.4
Msa0291400 AT5G11510.1 39.091 110 58 2 13 118 78 182 1.97e-21 95.9
Msa0291400 AT5G11510.1 36.000 100 62 2 16 114 29 127 5.41e-12 67.4
Msa0291400 AT5G11510.4 39.091 110 58 2 13 118 78 182 1.97e-21 95.9
Msa0291400 AT5G11510.4 36.000 100 62 2 16 114 29 127 5.41e-12 67.4
Msa0291400 AT5G11510.5 39.091 110 58 2 13 118 78 182 2.41e-21 95.5
Msa0291400 AT5G11510.5 36.000 100 62 2 16 114 29 127 5.42e-12 67.4
Msa0291400 AT5G11510.2 39.091 110 58 2 13 118 78 182 2.47e-21 95.5
Msa0291400 AT5G11510.2 36.000 100 62 2 16 114 29 127 5.84e-12 67.4
Msa0291400 AT1G71030.2 56.716 67 29 0 53 119 5 71 1.42e-20 88.2
Msa0291400 AT2G25230.1 39.623 106 63 1 11 116 21 125 8.58e-20 87.4
Msa0291400 AT1G66380.2 43.529 85 48 0 14 98 8 92 4.90e-18 79.0
Msa0291400 AT2G37630.1 40.385 104 60 1 16 117 4 107 1.26e-17 83.2
Msa0291400 AT1G16490.2 30.769 208 87 8 79 276 12 172 8.22e-17 78.2
Msa0291400 AT5G40430.1 35.849 106 66 2 11 116 49 152 1.91e-16 78.2
Msa0291400 AT4G25560.2 64.706 51 18 0 73 123 3 53 3.76e-16 76.6
Msa0291400 AT2G02820.3 34.167 120 75 2 19 138 33 148 4.94e-16 78.2
Msa0291400 AT2G02820.1 34.167 120 75 2 19 138 33 148 6.48e-16 79.0
Msa0291400 AT2G02820.2 34.167 120 75 2 19 138 33 148 7.57e-16 78.6
Msa0291400 AT4G00540.2 37.963 108 63 2 14 118 101 207 1.59e-15 77.4
Msa0291400 AT4G00540.1 37.963 108 63 2 14 118 99 205 2.26e-15 77.0
Msa0291400 AT1G14350.2 37.374 99 61 1 19 117 28 125 4.63e-15 76.3
Msa0291400 AT1G14350.1 37.374 99 61 1 19 117 28 125 4.63e-15 76.3
Msa0291400 AT5G59780.1 56.863 51 22 0 72 122 1 51 2.94e-13 67.4
Msa0291400 AT1G74650.3 69.767 43 13 0 80 122 2 44 4.11e-13 68.9
Msa0291400 AT3G46130.2 56.863 51 22 0 72 122 1 51 5.42e-13 67.4
Msa0291400 AT3G18100.1 36.082 97 61 1 14 110 544 639 7.54e-12 67.0
Msa0291400 AT3G18100.3 36.082 97 61 1 14 110 496 591 9.60e-12 66.6
Msa0291400 AT3G18100.4 36.082 97 61 1 14 110 383 478 9.97e-12 66.6
Msa0291400 AT3G28910.2 69.231 39 12 0 80 118 2 40 1.25e-11 64.3
Msa0291400 AT3G18100.2 36.082 97 61 1 14 110 331 426 1.39e-11 65.9
Msa0291400 AT5G61420.1 70.270 37 11 0 83 119 2 38 9.39e-11 62.4

Find 62 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCATAATATAAACTATT+TGG 0.114322 2_3:+39931194 None:intergenic
CCTGATTCTGAATTAGATTT+TGG 0.138125 2_3:-39927638 Msa0291400:CDS
AATTATTGTTGTTAACAATT+TGG 0.189180 2_3:+39928005 None:intergenic
GGTTATTGATGATTCTAATT+TGG 0.192444 2_3:+39928189 None:intergenic
AGAAATTTGGTCATGAAAAT+TGG 0.205386 2_3:-39931037 Msa0291400:CDS
GAACAAGAATTGGCTTCTTT+AGG 0.224414 2_3:-39927980 Msa0291400:CDS
TATACATACCTGCTTGTTTA+GGG 0.268631 2_3:+39931006 None:intergenic
AACAAGAATTGGCTTCTTTA+GGG 0.269704 2_3:-39927979 Msa0291400:CDS
GGGAATCAGATTATGATCTT+TGG 0.282083 2_3:-39927889 Msa0291400:CDS
GAATTTGATGATGACCCTTT+TGG 0.284214 2_3:+39928067 None:intergenic
TGAGATGGATCAATTATCTT+AGG 0.289642 2_3:-39928959 Msa0291400:CDS
ATATACATACCTGCTTGTTT+AGG 0.295786 2_3:+39931005 None:intergenic
GATGAATTTGAGAATGAGTT+TGG 0.300902 2_3:-39927776 Msa0291400:CDS
TGGTTTATAAATTAAACTTT+TGG 0.306773 2_3:+39927575 None:intergenic
TGTTCAACTTCATAATTCTT+TGG 0.308448 2_3:+39927707 None:intergenic
TGGCCCTCTTTGCCTCAAAA+TGG 0.309901 2_3:-39927602 Msa0291400:CDS
GCAAATTAATCAAGGTCATT+AGG 0.323746 2_3:-39927485 Msa0291400:three_prime_UTR
GGTATTTCAATCAAATTGTT+TGG 0.324518 2_3:+39927914 None:intergenic
CAATAATTTAGAACAAGAAT+TGG 0.355039 2_3:-39927990 Msa0291400:CDS
GAGAATGAGTTTGGAGTAGT+AGG 0.357141 2_3:-39927767 Msa0291400:CDS
CCAAAATCTAATTCAGAATC+AGG 0.359166 2_3:+39927638 None:intergenic
GATTATAACAAGTTCATTGT+TGG 0.377497 2_3:+39928099 None:intergenic
AAATTGCCTCTCTTTAAATC+AGG 0.395073 2_3:+39928936 None:intergenic
TAGGCATCTTTGATGTATGA+TGG 0.424972 2_3:-39927466 Msa0291400:three_prime_UTR
ATGAATATGTGATACTTAGT+AGG 0.434867 2_3:-39927521 Msa0291400:three_prime_UTR
ATAATCAATGAGGATCCAAA+AGG 0.471989 2_3:-39928082 Msa0291400:CDS
TTGATAAGAGAATTATCAAT+GGG 0.477778 2_3:-39931149 Msa0291400:exon
AGAGAATTATCAATGGGAAA+AGG 0.489575 2_3:-39931143 Msa0291400:exon
CAACTTCATAATTCTTTGGT+AGG 0.492672 2_3:+39927711 None:intergenic
TGGAGTAGTAGGTGAAACAA+AGG 0.494712 2_3:-39927756 Msa0291400:CDS
AATAAAGCTACATAAAACCT+TGG 0.496414 2_3:-39928889 Msa0291400:CDS
CTTAGGCCTGATTTAAAGAG+AGG 0.506387 2_3:-39928942 Msa0291400:CDS
GGAACTTATCAATCAAATGT+TGG 0.506519 2_3:-39927848 Msa0291400:CDS
ATAAAGCTACATAAAACCTT+GGG 0.507412 2_3:-39928888 Msa0291400:CDS
TTTGATAAGAGAATTATCAA+TGG 0.517572 2_3:-39931150 Msa0291400:exon
ACAATTTGATTGAAATACCA+TGG 0.523468 2_3:-39927910 Msa0291400:CDS
TGACATTGGCAAATTAATCA+AGG 0.537190 2_3:-39927493 Msa0291400:three_prime_UTR
ATAAGCTTGAGATCTTCAGC+AGG 0.539294 2_3:+39931071 None:intergenic
AGATCTTCAGCAGGGCTCCA+AGG 0.539378 2_3:+39931080 None:intergenic
TGATTCTGATGAAGAGGATG+AGG 0.546712 2_3:+39928168 None:intergenic
GGAAAAGTTGTCGTTTGAGA+TGG 0.546865 2_3:-39928974 Msa0291400:CDS
TACTAAGGTCTTCAACGATG+TGG 0.556646 2_3:-39928996 Msa0291400:intron
TTGAAATCAAATGCCTCATG+AGG 0.570871 2_3:+39927674 None:intergenic
CAAGACTTACTTGTTTCCCA+AGG 0.576973 2_3:+39928872 None:intergenic
ACTAAGGTCTTCAACGATGT+GGG 0.577645 2_3:-39928995 Msa0291400:intron
ATCTCATTATCAGTCCTACC+AGG 0.577695 2_3:+39928283 None:intergenic
TGGCAATATATTAGAAGATG+TGG 0.578763 2_3:-39927942 Msa0291400:CDS
CAATTTGATTGAAATACCAT+GGG 0.579155 2_3:-39927909 Msa0291400:CDS
CTTAGTAGGTATACTGACAT+TGG 0.581506 2_3:-39927507 Msa0291400:three_prime_UTR
GTCAAGTTAAGAGAGGACCT+TGG 0.582885 2_3:-39931097 Msa0291400:CDS
AGAGCTCTCCCTAAACAAGC+AGG 0.588705 2_3:-39931014 Msa0291400:intron
TAATCAATGAGGATCCAAAA+GGG 0.599310 2_3:-39928081 Msa0291400:CDS
AGATCATAATCTGATTCCCA+TGG 0.633397 2_3:+39927893 None:intergenic
ACTTGACTCTTATCACAACA+TGG 0.633962 2_3:+39931113 None:intergenic
GATAAGAGTCAAGTTAAGAG+AGG 0.635620 2_3:-39931104 Msa0291400:CDS
GGAGTCAAACAACAAAGATG+AGG 0.641607 2_3:-39927735 Msa0291400:CDS
TGAAATCAAATGCCTCATGA+GGG 0.643825 2_3:+39927675 None:intergenic
TGAACTTGTTATAATCAATG+AGG 0.647171 2_3:-39928092 Msa0291400:CDS
AATTCTCTTATCAAAGACAA+AGG 0.653631 2_3:+39931158 None:intergenic
ACAAGAAATTGACCCTCATG+AGG 0.656432 2_3:-39927687 Msa0291400:CDS
ATAATGAGATCAAGAATGTG+TGG 0.656652 2_3:-39928270 Msa0291400:CDS
TAAGCTTGAGATCTTCAGCA+GGG 0.705416 2_3:+39931072 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATGATATTTCATTAAAA+AGG - chr2_3:39927938-39927957 Msa0291400:CDS 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr2_3:39928310-39928329 Msa0291400:CDS 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr2_3:39928311-39928330 Msa0291400:CDS 10.0%
!!! ATTTTGGTAATATTTTAATT+TGG - chr2_3:39929750-39929769 Msa0291400:intron 10.0%
!!! TAATATTTTAATTTGGTTTA+AGG - chr2_3:39929757-39929776 Msa0291400:intron 10.0%
!!! AATATTTTAATTTGGTTTAA+GGG - chr2_3:39929758-39929777 Msa0291400:intron 10.0%
!!! GTTGTTTTTATAAATTATAT+TGG - chr2_3:39929917-39929936 Msa0291400:intron 10.0%
!!! GTTTTTACAAATTATAAAAT+TGG - chr2_3:39929989-39930008 Msa0291400:intron 10.0%
!! ATATAATCTGATTCATTTAA+AGG + chr2_3:39927909-39927928 None:intergenic 15.0%
!! TCAAAAAAAATTTGAATCAA+CGG + chr2_3:39928003-39928022 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - chr2_3:39928375-39928394 Msa0291400:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - chr2_3:39928376-39928395 Msa0291400:intron 15.0%
!!! GTAATTTTTTTTTTCAAGTA+TGG + chr2_3:39928571-39928590 None:intergenic 15.0%
!!! CTAATTATTTTGTTAATCTT+TGG - chr2_3:39929378-39929397 Msa0291400:intron 15.0%
!!! CTTGATTTAGATAATAATTT+TGG - chr2_3:39929734-39929753 Msa0291400:intron 15.0%
!!! TGGTAAAATTTAGTTTTTTT+AGG + chr2_3:39930035-39930054 None:intergenic 15.0%
!!! TTGAGATTAAAAATCAATTT+TGG + chr2_3:39930058-39930077 None:intergenic 15.0%
!!! ATGTAAATTAGTTTATGTTT+AGG + chr2_3:39930117-39930136 None:intergenic 15.0%
!!! AATTATTGTTGTTAACAATT+TGG + chr2_3:39930585-39930604 None:intergenic 15.0%
!!! TGGTTTATAAATTAAACTTT+TGG + chr2_3:39931015-39931034 None:intergenic 15.0%
!!! AAACTTTTTTTTCAAACAAT+TGG + chr2_3:39931035-39931054 None:intergenic 15.0%
!! CTCTCATAATATAAACTATT+TGG + chr2_3:39927396-39927415 None:intergenic 20.0%
!! TTTGATAAGAGAATTATCAA+TGG - chr2_3:39927437-39927456 Msa0291400:three_prime_UTR 20.0%
!! TTGATAAGAGAATTATCAAT+GGG - chr2_3:39927438-39927457 Msa0291400:three_prime_UTR 20.0%
!!! TGATTTGATATGTCATTTAT+AGG + chr2_3:39928222-39928241 None:intergenic 20.0%
!! AAAAGTGGAATATATTGTAT+TGG - chr2_3:39928334-39928353 Msa0291400:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr2_3:39928335-39928354 Msa0291400:intron 20.0%
!!! ACTTTTCCTTAAAAGTTAAA+AGG - chr2_3:39928705-39928724 Msa0291400:intron 20.0%
!! GACAAATAATTAAGAAAACA+AGG + chr2_3:39929125-39929144 None:intergenic 20.0%
!!! TCACTTTTTAAGTTTATATG+TGG + chr2_3:39929220-39929239 None:intergenic 20.0%
!!! ATGATCAAAAAAAGTGTTTT+GGG + chr2_3:39929254-39929273 None:intergenic 20.0%
!!! TATGATCAAAAAAAGTGTTT+TGG + chr2_3:39929255-39929274 None:intergenic 20.0%
!!! AACTGAATTTAAAACTTAGA+AGG + chr2_3:39929458-39929477 None:intergenic 20.0%
!! TTTATCTTCAATTCTTACTA+AGG - chr2_3:39929576-39929595 Msa0291400:intron 20.0%
!!! AGATTAAAAATCAATTTTGG+TGG + chr2_3:39930055-39930074 None:intergenic 20.0%
!!! TTCGTGTCTTTTTTTTTAAA+GGG + chr2_3:39930141-39930160 None:intergenic 20.0%
!!! ATTCGTGTCTTTTTTTTTAA+AGG + chr2_3:39930142-39930161 None:intergenic 20.0%
!!! AGAATCATTTTTATCAAATG+AGG - chr2_3:39930435-39930454 Msa0291400:intron 20.0%
!!! CAATAATTTAGAACAAGAAT+TGG - chr2_3:39930597-39930616 Msa0291400:intron 20.0%
!!! TGGAATTTTATTGACAATAT+TGG - chr2_3:39930718-39930737 Msa0291400:intron 20.0%
!!! ATTTTGGTAATATTCAATTG+TGG - chr2_3:39930965-39930984 Msa0291400:intron 20.0%
! AATTCTCTTATCAAAGACAA+AGG + chr2_3:39927432-39927451 None:intergenic 25.0%
!! ATAGCTTTTGTTCAGAAATT+TGG - chr2_3:39927537-39927556 Msa0291400:three_prime_UTR 25.0%
! AGAAATTTGGTCATGAAAAT+TGG - chr2_3:39927550-39927569 Msa0291400:three_prime_UTR 25.0%
!! CAAATGTAGAAATTTGAAGT+TGG + chr2_3:39927814-39927833 None:intergenic 25.0%
! AACCGTTCATTCAAATTTAA+TGG - chr2_3:39928028-39928047 Msa0291400:CDS 25.0%
! AGCCATTAAATTTGAATGAA+CGG + chr2_3:39928033-39928052 None:intergenic 25.0%
! GTCATTTATAGGTAGAAATA+GGG + chr2_3:39928211-39928230 None:intergenic 25.0%
!! TGTCATTTATAGGTAGAAAT+AGG + chr2_3:39928212-39928231 None:intergenic 25.0%
! ACATATCAAATCAAAGTTTG+AGG - chr2_3:39928229-39928248 Msa0291400:CDS 25.0%
! TGTATAAATAAAGGGAAAAG+TGG - chr2_3:39928319-39928338 Msa0291400:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - chr2_3:39928422-39928441 Msa0291400:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - chr2_3:39928423-39928442 Msa0291400:intron 25.0%
! AATGGTTATAGACTAATAGT+AGG + chr2_3:39928593-39928612 None:intergenic 25.0%
!! TGTATACTCTTTTATGGAAA+TGG + chr2_3:39928611-39928630 None:intergenic 25.0%
!!! GTTGTACCTTTTAACTTTTA+AGG + chr2_3:39928714-39928733 None:intergenic 25.0%
!!! ACAATGTCTTTTGAGAATAT+TGG + chr2_3:39928786-39928805 None:intergenic 25.0%
!! TCTCAAAAGACATTGTATTT+TGG - chr2_3:39928790-39928809 Msa0291400:intron 25.0%
!! AATGATACAAAATTTGTTCG+AGG + chr2_3:39928860-39928879 None:intergenic 25.0%
! CTCATATTCATAAATTGATG+TGG + chr2_3:39928969-39928988 None:intergenic 25.0%
! ATACATCAATTTATCCATGT+AGG - chr2_3:39929170-39929189 Msa0291400:intron 25.0%
!! TTTAAGTTTATATGTGGATG+TGG + chr2_3:39929214-39929233 None:intergenic 25.0%
! CATAATAAACAAAGGTTCTA+TGG - chr2_3:39929298-39929317 Msa0291400:intron 25.0%
!!! GTTAATCTTTGGAATCTATT+TGG - chr2_3:39929389-39929408 Msa0291400:intron 25.0%
!!! GGTTTTATGTAGCTTTATTA+TGG + chr2_3:39929697-39929716 None:intergenic 25.0%
! AATAAAGCTACATAAAACCT+TGG - chr2_3:39929698-39929717 Msa0291400:intron 25.0%
! ATAAAGCTACATAAAACCTT+GGG - chr2_3:39929699-39929718 Msa0291400:intron 25.0%
!! TGTGAAAAATTTGTTTCAGA+TGG - chr2_3:39930260-39930279 Msa0291400:intron 25.0%
!! GGTTATTGATGATTCTAATT+TGG + chr2_3:39930401-39930420 None:intergenic 25.0%
! TAAAAATGATTCTGATGAAG+AGG + chr2_3:39930428-39930447 None:intergenic 25.0%
!!! TGTTTTTCAGAATCTTTCAT+TGG + chr2_3:39930463-39930482 None:intergenic 25.0%
! GATTATAACAAGTTCATTGT+TGG + chr2_3:39930491-39930510 None:intergenic 25.0%
!!! TGAACTTGTTATAATCAATG+AGG - chr2_3:39930495-39930514 Msa0291400:intron 25.0%
! GGTATTTCAATCAAATTGTT+TGG + chr2_3:39930676-39930695 None:intergenic 25.0%
! ACAATTTGATTGAAATACCA+TGG - chr2_3:39930677-39930696 Msa0291400:intron 25.0%
! CAATTTGATTGAAATACCAT+GGG - chr2_3:39930678-39930697 Msa0291400:intron 25.0%
! ATGTTGTTGAAGCAAAAAAT+TGG - chr2_3:39930779-39930798 Msa0291400:intron 25.0%
! TGTTCAACTTCATAATTCTT+TGG + chr2_3:39930883-39930902 None:intergenic 25.0%
! ATGAATATGTGATACTTAGT+AGG - chr2_3:39931066-39931085 Msa0291400:CDS 25.0%
AGAGAATTATCAATGGGAAA+AGG - chr2_3:39927444-39927463 Msa0291400:three_prime_UTR 30.0%
TATACATACCTGCTTGTTTA+GGG + chr2_3:39927584-39927603 None:intergenic 30.0%
ATATACATACCTGCTTGTTT+AGG + chr2_3:39927585-39927604 None:intergenic 30.0%
! TGTTGTGAATTGGATTTTGT+TGG - chr2_3:39927675-39927694 Msa0291400:CDS 30.0%
! GGCTTTATAACAACAAATAC+AGG + chr2_3:39927793-39927812 None:intergenic 30.0%
ATGCAAACAAATCAGTAGTT+TGG - chr2_3:39928118-39928137 Msa0291400:CDS 30.0%
! ATCAGTAGTTTGGTTTAAGT+TGG - chr2_3:39928128-39928147 Msa0291400:CDS 30.0%
AGAAAATGAGTCAGTTATTC+CGG - chr2_3:39928458-39928477 Msa0291400:intron 30.0%
TATCTTACCTACCATATACA+AGG - chr2_3:39928526-39928545 Msa0291400:intron 30.0%
! AAGGGATGTATACTCTTTTA+TGG + chr2_3:39928617-39928636 None:intergenic 30.0%
TATATGGGTATCCCTTTATT+AGG - chr2_3:39928647-39928666 Msa0291400:intron 30.0%
GTACAGTTTCACCTAATAAA+GGG + chr2_3:39928661-39928680 None:intergenic 30.0%
TGTACAGTTTCACCTAATAA+AGG + chr2_3:39928662-39928681 None:intergenic 30.0%
GATTAATCATAGCTCACAAT+AGG + chr2_3:39928759-39928778 None:intergenic 30.0%
!! TGTCTTTTGAGAATATTGGA+GGG + chr2_3:39928782-39928801 None:intergenic 30.0%
!! ATGTCTTTTGAGAATATTGG+AGG + chr2_3:39928783-39928802 None:intergenic 30.0%
CGTGTATGCATAATAAACAA+AGG - chr2_3:39929290-39929309 Msa0291400:intron 30.0%
AAAATCATGCAGGGATATAT+AGG - chr2_3:39929339-39929358 Msa0291400:intron 30.0%
TGAGATGGATCAATTATCTT+AGG - chr2_3:39929628-39929647 Msa0291400:intron 30.0%
AAATTGCCTCTCTTTAAATC+AGG + chr2_3:39929654-39929673 None:intergenic 30.0%
AATGCACATATCATGATAAG+CGG - chr2_3:39929818-39929837 Msa0291400:intron 30.0%
! ACATTCATGTAAAAGTGTGT+TGG + chr2_3:39930093-39930112 None:intergenic 30.0%
ACGAATTTACATTCAACTCA+CGG - chr2_3:39930156-39930175 Msa0291400:intron 30.0%
!!! AAGATTGCATCTTATTTTCC+TGG - chr2_3:39930286-39930305 Msa0291400:intron 30.0%
ATAATGAGATCAAGAATGTG+TGG - chr2_3:39930317-39930336 Msa0291400:intron 30.0%
ATAATCAATGAGGATCCAAA+AGG - chr2_3:39930505-39930524 Msa0291400:intron 30.0%
TAATCAATGAGGATCCAAAA+GGG - chr2_3:39930506-39930525 Msa0291400:intron 30.0%
! AACAAGAATTGGCTTCTTTA+GGG - chr2_3:39930608-39930627 Msa0291400:intron 30.0%
!! TTAGGGTTTTATGATGATGT+TGG - chr2_3:39930625-39930644 Msa0291400:intron 30.0%
TGGCAATATATTAGAAGATG+TGG - chr2_3:39930645-39930664 Msa0291400:intron 30.0%
GGAACTTATCAATCAAATGT+TGG - chr2_3:39930739-39930758 Msa0291400:intron 30.0%
GATGAATTTGAGAATGAGTT+TGG - chr2_3:39930811-39930830 Msa0291400:intron 30.0%
CAACTTCATAATTCTTTGGT+AGG + chr2_3:39930879-39930898 None:intergenic 30.0%
CCAAAATCTAATTCAGAATC+AGG + chr2_3:39930952-39930971 None:intergenic 30.0%
! CCTGATTCTGAATTAGATTT+TGG - chr2_3:39930949-39930968 Msa0291400:intron 30.0%
!!! ACTTTTGGAATACCATTTTG+AGG + chr2_3:39931000-39931019 None:intergenic 30.0%
TGACATTGGCAAATTAATCA+AGG - chr2_3:39931094-39931113 Msa0291400:CDS 30.0%
GCAAATTAATCAAGGTCATT+AGG - chr2_3:39931102-39931121 Msa0291400:CDS 30.0%
ACTTGACTCTTATCACAACA+TGG + chr2_3:39927477-39927496 None:intergenic 35.0%
GATAAGAGTCAAGTTAAGAG+AGG - chr2_3:39927483-39927502 Msa0291400:three_prime_UTR 35.0%
GACACAAAAAGAGAGAGATA+TGG + chr2_3:39927650-39927669 None:intergenic 35.0%
!! GTGTCTGTTTTGTTGTGAAT+TGG - chr2_3:39927665-39927684 Msa0291400:CDS 35.0%
!! TGGTTTAAGTTGGTGACATT+AGG - chr2_3:39928138-39928157 Msa0291400:CDS 35.0%
AATGCAACCAATTAGTGATG+TGG - chr2_3:39928184-39928203 Msa0291400:CDS 35.0%
ATGCAACCAATTAGTGATGT+GGG - chr2_3:39928185-39928204 Msa0291400:CDS 35.0%
GAAAATGAGTCAGTTATTCC+GGG - chr2_3:39928459-39928478 Msa0291400:intron 35.0%
!!! GAGGGAGTACATTTTTTACA+TGG - chr2_3:39928485-39928504 Msa0291400:intron 35.0%
! AGAGTATACATCCCTTCTTT+TGG - chr2_3:39928621-39928640 Msa0291400:intron 35.0%
! TCCCTTCTTTTGGCAATATA+TGG - chr2_3:39928631-39928650 Msa0291400:intron 35.0%
CCCATATATTGCCAAAAGAA+GGG + chr2_3:39928635-39928654 None:intergenic 35.0%
! CCCTTCTTTTGGCAATATAT+GGG - chr2_3:39928632-39928651 Msa0291400:intron 35.0%
ACCCATATATTGCCAAAAGA+AGG + chr2_3:39928636-39928655 None:intergenic 35.0%
!! GTCTTTTGAGAATATTGGAG+GGG + chr2_3:39928781-39928800 None:intergenic 35.0%
GTGGCATTATTAATCCTACA+TGG + chr2_3:39929187-39929206 None:intergenic 35.0%
! GCATGATTTTCTCAAAGCAA+GGG + chr2_3:39929329-39929348 None:intergenic 35.0%
! TGCATGATTTTCTCAAAGCA+AGG + chr2_3:39929330-39929349 None:intergenic 35.0%
!! TTGCTTTGAGAAAATCATGC+AGG - chr2_3:39929329-39929348 Msa0291400:intron 35.0%
!! TGCTTTGAGAAAATCATGCA+GGG - chr2_3:39929330-39929349 Msa0291400:intron 35.0%
! ATTTGGTTTAAGGGTCTACT+TGG - chr2_3:39929767-39929786 Msa0291400:intron 35.0%
!!! TTGCATCTTATTTTCCTGGT+AGG - chr2_3:39930290-39930309 Msa0291400:intron 35.0%
GTCAAAAAATCAGAGTCAAG+TGG - chr2_3:39930367-39930386 Msa0291400:intron 35.0%
!!! GAATTTGATGATGACCCTTT+TGG + chr2_3:39930523-39930542 None:intergenic 35.0%
! GAACAAGAATTGGCTTCTTT+AGG - chr2_3:39930607-39930626 Msa0291400:intron 35.0%
AGATCATAATCTGATTCCCA+TGG + chr2_3:39930697-39930716 None:intergenic 35.0%
GGGAATCAGATTATGATCTT+TGG - chr2_3:39930698-39930717 Msa0291400:intron 35.0%
TGAAATCAAATGCCTCATGA+GGG + chr2_3:39930915-39930934 None:intergenic 35.0%
TTGAAATCAAATGCCTCATG+AGG + chr2_3:39930916-39930935 None:intergenic 35.0%
!!! ATACCATTTTGAGGCAAAGA+GGG + chr2_3:39930991-39931010 None:intergenic 35.0%
!!! AATACCATTTTGAGGCAAAG+AGG + chr2_3:39930992-39931011 None:intergenic 35.0%
CTTAGTAGGTATACTGACAT+TGG - chr2_3:39931080-39931099 Msa0291400:CDS 35.0%
TAGGCATCTTTGATGTATGA+TGG - chr2_3:39931121-39931140 Msa0291400:CDS 35.0%
TAAGCTTGAGATCTTCAGCA+GGG + chr2_3:39927518-39927537 None:intergenic 40.0%
ATAAGCTTGAGATCTTCAGC+AGG + chr2_3:39927519-39927538 None:intergenic 40.0%
GTCAAATAAATTGGGACGGA+GGG + chr2_3:39928267-39928286 None:intergenic 40.0%
AGGGGTCAAATAAATTGGGA+CGG + chr2_3:39928271-39928290 None:intergenic 40.0%
TCCCAATTTATTTGACCCCT+TGG - chr2_3:39928271-39928290 Msa0291400:CDS 40.0%
GCCAAGGGGTCAAATAAATT+GGG + chr2_3:39928275-39928294 None:intergenic 40.0%
AGCCAAGGGGTCAAATAAAT+TGG + chr2_3:39928276-39928295 None:intergenic 40.0%
ATCTGTGTGAAATGAGCCAA+GGG + chr2_3:39928290-39928309 None:intergenic 40.0%
AATCTGTGTGAAATGAGCCA+AGG + chr2_3:39928291-39928310 None:intergenic 40.0%
TATGGATCATTCAAGCTGGA+TGG + chr2_3:39928553-39928572 None:intergenic 40.0%
CAAGTATGGATCATTCAAGC+TGG + chr2_3:39928557-39928576 None:intergenic 40.0%
TACTAAGGTCTTCAACGATG+TGG - chr2_3:39929591-39929610 Msa0291400:intron 40.0%
ACTAAGGTCTTCAACGATGT+GGG - chr2_3:39929592-39929611 Msa0291400:intron 40.0%
! GGAAAAGTTGTCGTTTGAGA+TGG - chr2_3:39929613-39929632 Msa0291400:intron 40.0%
CTTAGGCCTGATTTAAAGAG+AGG - chr2_3:39929645-39929664 Msa0291400:intron 40.0%
! CAATTTTACAGCAGAGGAAG+AGG - chr2_3:39929668-39929687 Msa0291400:intron 40.0%
CAAGACTTACTTGTTTCCCA+AGG + chr2_3:39929718-39929737 None:intergenic 40.0%
ACCACATAATCAAACGCACA+CGG - chr2_3:39930201-39930220 Msa0291400:intron 40.0%
ATCTCATTATCAGTCCTACC+AGG + chr2_3:39930307-39930326 None:intergenic 40.0%
TGATTCTGATGAAGAGGATG+AGG + chr2_3:39930422-39930441 None:intergenic 40.0%
! GAGAATGAGTTTGGAGTAGT+AGG - chr2_3:39930820-39930839 Msa0291400:intron 40.0%
TGGAGTAGTAGGTGAAACAA+AGG - chr2_3:39930831-39930850 Msa0291400:intron 40.0%
GGAGTCAAACAACAAAGATG+AGG - chr2_3:39930852-39930871 Msa0291400:intron 40.0%
ACAAGAAATTGACCCTCATG+AGG - chr2_3:39930900-39930919 Msa0291400:intron 40.0%
GTCAAGTTAAGAGAGGACCT+TGG - chr2_3:39927490-39927509 Msa0291400:three_prime_UTR 45.0%
GGTGACATTAGGCTTCTCTA+TGG - chr2_3:39928149-39928168 Msa0291400:CDS 45.0%
ATAGGGCCCACATCACTAAT+TGG + chr2_3:39928194-39928213 None:intergenic 45.0%
GGTCAAATAAATTGGGACGG+AGG + chr2_3:39928268-39928287 None:intergenic 45.0%
TCTGTGTGAAATGAGCCAAG+GGG + chr2_3:39928289-39928308 None:intergenic 45.0%
ATGAGTCAGTTATTCCGGGA+CGG - chr2_3:39928463-39928482 Msa0291400:intron 45.0%
GGATGGACCTTGTATATGGT+AGG + chr2_3:39928536-39928555 None:intergenic 45.0%
AGCTGGATGGACCTTGTATA+TGG + chr2_3:39928540-39928559 None:intergenic 45.0%
ATTGATGTGGCAACACATCG+TGG + chr2_3:39928956-39928975 None:intergenic 45.0%
! TATATGTGGATGTGGTGACG+TGG + chr2_3:39929206-39929225 None:intergenic 45.0%
! GAGAGGCAATTTTACAGCAG+AGG - chr2_3:39929662-39929681 Msa0291400:intron 45.0%
ACCGTGTGCGTTTGATTATG+TGG + chr2_3:39930205-39930224 None:intergenic 45.0%
!!! ATTTAAAATAATTTTATGTT+TGG + chr2_3:39929877-39929896 None:intergenic 5.0%
AGAGCTCTCCCTAAACAAGC+AGG - chr2_3:39927573-39927592 Msa0291400:exon 50.0%
! AATTGGGACGGAGGGAGTAT+TGG + chr2_3:39928259-39928278 None:intergenic 50.0%
AAAATGTACTCCCTCCGTCC+CGG + chr2_3:39928480-39928499 None:intergenic 50.0%
TGGCCCTCTTTGCCTCAAAA+TGG - chr2_3:39930985-39931004 Msa0291400:intron 50.0%
AGATCTTCAGCAGGGCTCCA+AGG + chr2_3:39927510-39927529 None:intergenic 55.0%
AGTCAGTTATTCCGGGACGG+AGG - chr2_3:39928466-39928485 Msa0291400:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr2_3:39928467-39928486 Msa0291400:intron 55.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 39927370 39931239 39927370 ID=Msa0291400;Name=Msa0291400
chr2_3 mRNA 39927370 39931239 39927370 ID=Msa0291400-mRNA-1;Parent=Msa0291400;Name=Msa0291400-mRNA-1;_AED=0.07;_eAED=0.07;_QI=86|1|1|1|1|1|3|216|337
chr2_3 exon 39927370 39928330 39927370 ID=Msa0291400-mRNA-1:exon:12835;Parent=Msa0291400-mRNA-1
chr2_3 exon 39928882 39929011 39928882 ID=Msa0291400-mRNA-1:exon:12834;Parent=Msa0291400-mRNA-1
chr2_3 exon 39931015 39931239 39931015 ID=Msa0291400-mRNA-1:exon:12833;Parent=Msa0291400-mRNA-1
chr2_3 five_prime_UTR 39931154 39931239 39931154 ID=Msa0291400-mRNA-1:five_prime_utr;Parent=Msa0291400-mRNA-1
chr2_3 CDS 39931015 39931153 39931015 ID=Msa0291400-mRNA-1:cds;Parent=Msa0291400-mRNA-1
chr2_3 CDS 39928882 39929011 39928882 ID=Msa0291400-mRNA-1:cds;Parent=Msa0291400-mRNA-1
chr2_3 CDS 39927586 39928330 39927586 ID=Msa0291400-mRNA-1:cds;Parent=Msa0291400-mRNA-1
chr2_3 three_prime_UTR 39927370 39927585 39927370 ID=Msa0291400-mRNA-1:three_prime_utr;Parent=Msa0291400-mRNA-1
Gene Sequence

>Msa0291400

ATGGGAAAAGGAAGAGCACCATGTTGTGATAAGAGTCAAGTTAAGAGAGGACCTTGGAGCCCTGCTGAAGATCTCAAGCTTATAGCTTTTGTTCAGAAATTTGGTCATGAAAATTGGAGAGCTCTCCCTAAACAAGCAGGTCTTCAACGATGTGGGAAAAGTTGTCGTTTGAGATGGATCAATTATCTTAGGCCTGATTTAAAGAGAGGCAATTTTACAGCAGAGGAAGAGGAAACCATAATAAAGCTACATAAAACCTTGGGAAACAAATGGTCAAAGATTGCATCTTATTTTCCTGGTAGGACTGATAATGAGATCAAGAATGTGTGGAACACACATTTAAAGAAAAAACTTGTTGTCAAAAAATCAGAGTCAAGTGGAGATGAATCCAAATTAGAATCATCAATAACCTCATCCTCTTCATCAGAATCATTTTTATCAAATGAGGTACCAATGAAAGATTCTGAAAAACAAGTATCCAACAATGAACTTGTTATAATCAATGAGGATCCAAAAGGGTCATCATCAAATTCATTATCATCTTCAATTGAGTCTAATATCTTGAACTCAAGCCAAATTGTTAACAACAATAATTTAGAACAAGAATTGGCTTCTTTAGGGTTTTATGATGATGTTGGCAATATATTAGAAGATGTGGATGATCCAAACAATTTGATTGAAATACCATGGGAATCAGATTATGATCTTTGGAATTTTATTGACAATATTGGAACTTATCAATCAAATGTTGGTGAAGAGACTGTTCAAGATGTTGTTGAAGCAAAAAATTGGTCATCACATGATGAATTTGAGAATGAGTTTGGAGTAGTAGGTGAAACAAAGGAGTCAAACAACAAAGATGAGGTCCTACCAAAGAATTATGAAGTTGAACAAGAAATTGACCCTCATGAGGCATTTGATTTCAATGATATTATAATGCCTGATTCTGAATTAGATTTTGGTAATATTCAATTGTGGCCCTCTTTGCCTCAAAATGGTATTCCAAAAGTTTAA

Protein sequence

>Msa0291400

MGKGRAPCCDKSQVKRGPWSPAEDLKLIAFVQKFGHENWRALPKQAGLQRCGKSCRLRWINYLRPDLKRGNFTAEEEETIIKLHKTLGNKWSKIASYFPGRTDNEIKNVWNTHLKKKLVVKKSESSGDESKLESSITSSSSSESFLSNEVPMKDSEKQVSNNELVIINEDPKGSSSNSLSSSIESNILNSSQIVNNNNLEQELASLGFYDDVGNILEDVDDPNNLIEIPWESDYDLWNFIDNIGTYQSNVGEETVQDVVEAKNWSSHDEFENEFGVVGETKESNNKDEVLPKNYEVEQEIDPHEAFDFNDIIMPDSELDFGNIQLWPSLPQNGIPKV*