Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48646.t1 | XP_013455235.1 | 96.4 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 3.20E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48646.t1 | Q9SMS0 | 59.4 | 229 | 82 | 3 | 20 | 247 | 28 | 246 | 1.4e-69 | 264.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48646.t1 | A0A072UIK1 | 96.4 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 2.3e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene48646 | 0.840305 | 9.42E-58 | -1.69E-46 |
| MS.gene049222 | MS.gene48646 | 0.872424 | 3.22E-67 | -1.69E-46 |
| MS.gene049232 | MS.gene48646 | 0.905056 | 6.42E-80 | -1.69E-46 |
| MS.gene049285 | MS.gene48646 | 0.845836 | 3.17E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene48646 | 0.853197 | 2.80E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene48646 | 0.819248 | 1.28E-52 | -1.69E-46 |
| MS.gene049396 | MS.gene48646 | 0.906056 | 2.23E-80 | -1.69E-46 |
| MS.gene049552 | MS.gene48646 | 0.834263 | 3.32E-56 | -1.69E-46 |
| MS.gene049600 | MS.gene48646 | 0.803516 | 3.36E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene48646 | 0.877159 | 7.86E-69 | -1.69E-46 |
| MS.gene049633 | MS.gene48646 | 0.849629 | 2.86E-60 | -1.69E-46 |
| MS.gene049656 | MS.gene48646 | 0.840121 | 1.05E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene48646 | 0.809607 | 1.74E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene48646 | 0.818088 | 2.35E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene48646 | 0.815578 | 8.60E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene48646 | 0.873372 | 1.55E-67 | -1.69E-46 |
| MS.gene050170 | MS.gene48646 | 0.896693 | 2.89E-76 | -1.69E-46 |
| MS.gene050216 | MS.gene48646 | 0.842704 | 2.20E-58 | -1.69E-46 |
| MS.gene050323 | MS.gene48646 | 0.902095 | 1.38E-78 | -1.69E-46 |
| MS.gene050380 | MS.gene48646 | -0.80649 | 8.02E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene48646 | -0.81421 | 1.73E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene48646 | 0.882378 | 1.10E-70 | -1.69E-46 |
| MS.gene050499 | MS.gene48646 | 0.849576 | 2.96E-60 | -1.69E-46 |
| MS.gene050502 | MS.gene48646 | 0.922014 | 1.70E-88 | -1.69E-46 |
| MS.gene050504 | MS.gene48646 | 0.854921 | 8.92E-62 | -1.69E-46 |
| MS.gene050518 | MS.gene48646 | 0.836398 | 9.58E-57 | -1.69E-46 |
| MS.gene050520 | MS.gene48646 | 0.839162 | 1.87E-57 | -1.69E-46 |
| MS.gene050538 | MS.gene48646 | 0.838878 | 2.21E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene48646 | 0.847184 | 1.36E-59 | -1.69E-46 |
| MS.gene050593 | MS.gene48646 | 0.845901 | 3.04E-59 | -1.69E-46 |
| MS.gene050612 | MS.gene48646 | 0.844151 | 9.03E-59 | -1.69E-46 |
| MS.gene050662 | MS.gene48646 | 0.821887 | 3.18E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene48646 | 0.842668 | 2.25E-58 | -1.69E-46 |
| MS.gene050697 | MS.gene48646 | 0.855405 | 6.45E-62 | -1.69E-46 |
| MS.gene050699 | MS.gene48646 | 0.820369 | 7.11E-53 | -1.69E-46 |
| MS.gene050747 | MS.gene48646 | 0.894098 | 3.39E-75 | -1.69E-46 |
| MS.gene050772 | MS.gene48646 | 0.884882 | 1.31E-71 | -1.69E-46 |
| MS.gene05080 | MS.gene48646 | 0.888633 | 4.96E-73 | -1.69E-46 |
| MS.gene05081 | MS.gene48646 | 0.828076 | 1.10E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene48646 | 0.902791 | 6.76E-79 | -1.69E-46 |
| MS.gene050871 | MS.gene48646 | 0.905529 | 3.90E-80 | -1.69E-46 |
| MS.gene050904 | MS.gene48646 | 0.81947 | 1.14E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene48646 | 0.888611 | 5.07E-73 | -1.69E-46 |
| MS.gene050986 | MS.gene48646 | 0.854448 | 1.22E-61 | -1.69E-46 |
| MS.gene05105 | MS.gene48646 | 0.8136 | 2.36E-51 | -1.69E-46 |
| MS.gene05118 | MS.gene48646 | 0.820011 | 8.59E-53 | -1.69E-46 |
| MS.gene051268 | MS.gene48646 | 0.854231 | 1.41E-61 | -1.69E-46 |
| MS.gene051387 | MS.gene48646 | 0.818698 | 1.71E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene48646 | 0.887007 | 2.08E-72 | -1.69E-46 |
| MS.gene051551 | MS.gene48646 | 0.843719 | 1.18E-58 | -1.69E-46 |
| MS.gene051560 | MS.gene48646 | 0.808102 | 3.65E-50 | -1.69E-46 |
| MS.gene051666 | MS.gene48646 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene051734 | MS.gene48646 | 0.848179 | 7.23E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene48646 | 0.860393 | 2.13E-63 | -1.69E-46 |
| MS.gene051874 | MS.gene48646 | 0.833337 | 5.65E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene48646 | 0.859666 | 3.53E-63 | -1.69E-46 |
| MS.gene052066 | MS.gene48646 | 0.860937 | 1.46E-63 | -1.69E-46 |
| MS.gene052164 | MS.gene48646 | 0.891619 | 3.37E-74 | -1.69E-46 |
| MS.gene052346 | MS.gene48646 | 0.872848 | 2.32E-67 | -1.69E-46 |
| MS.gene052414 | MS.gene48646 | 0.853445 | 2.38E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene48646 | 0.808071 | 3.71E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene48646 | 0.870849 | 1.07E-66 | -1.69E-46 |
| MS.gene052486 | MS.gene48646 | 0.871516 | 6.44E-67 | -1.69E-46 |
| MS.gene052501 | MS.gene48646 | 0.820995 | 5.11E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene48646 | 0.864699 | 1.01E-64 | -1.69E-46 |
| MS.gene052504 | MS.gene48646 | 0.83976 | 1.31E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene48646 | 0.816451 | 5.49E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene48646 | 0.85353 | 2.25E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene48646 | 0.834039 | 3.77E-56 | -1.69E-46 |
| MS.gene052822 | MS.gene48646 | 0.855204 | 7.38E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene48646 | 0.864485 | 1.18E-64 | -1.69E-46 |
| MS.gene052825 | MS.gene48646 | 0.855407 | 6.44E-62 | -1.69E-46 |
| MS.gene052916 | MS.gene48646 | 0.801473 | 8.86E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene48646 | 0.880857 | 3.89E-70 | -1.69E-46 |
| MS.gene052982 | MS.gene48646 | 0.827983 | 1.16E-54 | -1.69E-46 |
| MS.gene052986 | MS.gene48646 | 0.800329 | 1.52E-48 | -1.69E-46 |
| MS.gene052987 | MS.gene48646 | 0.802556 | 5.30E-49 | -1.69E-46 |
| MS.gene052999 | MS.gene48646 | 0.803686 | 3.10E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene48646 | 0.808185 | 3.51E-50 | -1.69E-46 |
| MS.gene053117 | MS.gene48646 | 0.812033 | 5.20E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene48646 | 0.880022 | 7.73E-70 | -1.69E-46 |
| MS.gene053207 | MS.gene48646 | 0.839655 | 1.39E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene48646 | 0.864196 | 1.45E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene48646 | 0.866437 | 2.85E-65 | -1.69E-46 |
| MS.gene053318 | MS.gene48646 | 0.841552 | 4.43E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene48646 | -0.811158 | 8.05E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene48646 | 0.897795 | 9.94E-77 | -1.69E-46 |
| MS.gene053449 | MS.gene48646 | 0.822554 | 2.23E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene48646 | 0.853521 | 2.26E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene48646 | 0.819794 | 9.63E-53 | -1.69E-46 |
| MS.gene053505 | MS.gene48646 | 0.830772 | 2.43E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene48646 | 0.928453 | 2.83E-92 | -1.69E-46 |
| MS.gene053626 | MS.gene48646 | 0.913398 | 6.44E-84 | -1.69E-46 |
| MS.gene053632 | MS.gene48646 | 0.802148 | 6.44E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene48646 | 0.843335 | 1.49E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene48646 | 0.867195 | 1.64E-65 | -1.69E-46 |
| MS.gene053912 | MS.gene48646 | 0.82005 | 8.42E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene48646 | 0.843908 | 1.05E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene48646 | 0.872472 | 3.10E-67 | -1.69E-46 |
| MS.gene054408 | MS.gene48646 | 0.859707 | 3.43E-63 | -1.69E-46 |
| MS.gene054595 | MS.gene48646 | 0.889854 | 1.67E-73 | -1.69E-46 |
| MS.gene054600 | MS.gene48646 | 0.845593 | 3.69E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene48646 | 0.83446 | 2.96E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene48646 | -0.822502 | 2.29E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene48646 | 0.83887 | 2.22E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene48646 | 0.850548 | 1.58E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene48646 | 0.851256 | 9.99E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene48646 | 0.857465 | 1.60E-62 | -1.69E-46 |
| MS.gene05505 | MS.gene48646 | 0.836569 | 8.66E-57 | -1.69E-46 |
| MS.gene055212 | MS.gene48646 | 0.801955 | 7.05E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene48646 | 0.877608 | 5.48E-69 | -1.69E-46 |
| MS.gene055289 | MS.gene48646 | 0.814869 | 1.24E-51 | -1.69E-46 |
| MS.gene055362 | MS.gene48646 | 0.845235 | 4.61E-59 | -1.69E-46 |
| MS.gene055502 | MS.gene48646 | 0.847088 | 1.44E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene48646 | 0.874523 | 6.32E-68 | -1.69E-46 |
| MS.gene055629 | MS.gene48646 | 0.828517 | 8.60E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene48646 | 0.855943 | 4.49E-62 | -1.69E-46 |
| MS.gene055741 | MS.gene48646 | 0.859455 | 4.09E-63 | -1.69E-46 |
| MS.gene055744 | MS.gene48646 | 0.851618 | 7.89E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene48646 | 0.844786 | 6.09E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene48646 | 0.874017 | 9.38E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene48646 | 0.84549 | 3.93E-59 | -1.69E-46 |
| MS.gene055776 | MS.gene48646 | 0.81443 | 1.55E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene48646 | 0.891103 | 5.39E-74 | -1.69E-46 |
| MS.gene055909 | MS.gene48646 | 0.855008 | 8.41E-62 | -1.69E-46 |
| MS.gene055911 | MS.gene48646 | 0.85279 | 3.66E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene48646 | 0.835058 | 2.09E-56 | -1.69E-46 |
| MS.gene05601 | MS.gene48646 | 0.805442 | 1.33E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene48646 | 0.877416 | 6.40E-69 | -1.69E-46 |
| MS.gene056046 | MS.gene48646 | 0.846564 | 2.01E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene48646 | 0.923319 | 3.11E-89 | -1.69E-46 |
| MS.gene056374 | MS.gene48646 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene48646 | 0.848021 | 7.99E-60 | -1.69E-46 |
| MS.gene056422 | MS.gene48646 | 0.888824 | 4.19E-73 | -1.69E-46 |
| MS.gene056446 | MS.gene48646 | 0.883166 | 5.65E-71 | -1.69E-46 |
| MS.gene056448 | MS.gene48646 | 0.852646 | 4.03E-61 | -1.69E-46 |
| MS.gene056504 | MS.gene48646 | 0.904191 | 1.59E-79 | -1.69E-46 |
| MS.gene056510 | MS.gene48646 | 0.868171 | 7.96E-66 | -1.69E-46 |
| MS.gene056511 | MS.gene48646 | 0.824415 | 8.17E-54 | -1.69E-46 |
| MS.gene05664 | MS.gene48646 | 0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene48646 | 0.854999 | 8.47E-62 | -1.69E-46 |
| MS.gene05666 | MS.gene48646 | 0.833127 | 6.38E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene48646 | 0.81068 | 1.02E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene48646 | 0.852395 | 4.75E-61 | -1.69E-46 |
| MS.gene056947 | MS.gene48646 | 0.810866 | 9.32E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene48646 | 0.858157 | 9.99E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene48646 | 0.867188 | 1.65E-65 | -1.69E-46 |
| MS.gene057086 | MS.gene48646 | 0.892568 | 1.41E-74 | -1.69E-46 |
| MS.gene057331 | MS.gene48646 | 0.846209 | 2.51E-59 | -1.69E-46 |
| MS.gene057416 | MS.gene48646 | 0.829287 | 5.60E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene48646 | 0.810221 | 1.28E-50 | -1.69E-46 |
| MS.gene057687 | MS.gene48646 | 0.801294 | 9.63E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene48646 | 0.872273 | 3.61E-67 | -1.69E-46 |
| MS.gene057831 | MS.gene48646 | 0.83453 | 2.84E-56 | -1.69E-46 |
| MS.gene057856 | MS.gene48646 | 0.81135 | 7.31E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene48646 | 0.821236 | 4.49E-53 | -1.69E-46 |
| MS.gene057876 | MS.gene48646 | 0.841471 | 4.66E-58 | -1.69E-46 |
| MS.gene05787 | MS.gene48646 | 0.910692 | 1.41E-82 | -1.69E-46 |
| MS.gene058120 | MS.gene48646 | 0.843356 | 1.47E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene48646 | 0.870296 | 1.62E-66 | -1.69E-46 |
| MS.gene058157 | MS.gene48646 | 0.858721 | 6.78E-63 | -1.69E-46 |
| MS.gene058171 | MS.gene48646 | -0.808052 | 3.74E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene48646 | -0.812366 | 4.40E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene48646 | -0.811281 | 7.57E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene48646 | -0.801862 | 7.37E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene48646 | 0.838024 | 3.68E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene48646 | 0.901268 | 3.18E-78 | -1.69E-46 |
| MS.gene058419 | MS.gene48646 | 0.846418 | 2.20E-59 | -1.69E-46 |
| MS.gene058420 | MS.gene48646 | 0.809634 | 1.72E-50 | -1.69E-46 |
| MS.gene058459 | MS.gene48646 | 0.80021 | 1.60E-48 | -1.69E-46 |
| MS.gene058544 | MS.gene48646 | 0.837962 | 3.81E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene48646 | 0.809018 | 2.33E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene48646 | 0.840834 | 6.85E-58 | -1.69E-46 |
| MS.gene058838 | MS.gene48646 | 0.85049 | 1.64E-60 | -1.69E-46 |
| MS.gene058948 | MS.gene48646 | 0.832692 | 8.18E-56 | -1.69E-46 |
| MS.gene058978 | MS.gene48646 | -0.801205 | 1.01E-48 | -1.69E-46 |
| MS.gene059022 | MS.gene48646 | 0.8424 | 2.65E-58 | -1.69E-46 |
| MS.gene059023 | MS.gene48646 | 0.858901 | 5.99E-63 | -1.69E-46 |
| MS.gene059129 | MS.gene48646 | 0.808289 | 3.33E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene48646 | 0.856549 | 2.98E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene48646 | 0.848878 | 4.63E-60 | -1.69E-46 |
| MS.gene05934 | MS.gene48646 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene48646 | 0.899231 | 2.43E-77 | -1.69E-46 |
| MS.gene059368 | MS.gene48646 | 0.868905 | 4.61E-66 | -1.69E-46 |
| MS.gene059455 | MS.gene48646 | 0.801469 | 8.87E-49 | -1.69E-46 |
| MS.gene059517 | MS.gene48646 | 0.854671 | 1.05E-61 | -1.69E-46 |
| MS.gene059667 | MS.gene48646 | 0.912519 | 1.77E-83 | -1.69E-46 |
| MS.gene059677 | MS.gene48646 | 0.814041 | 1.89E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene48646 | 0.868713 | 5.32E-66 | -1.69E-46 |
| MS.gene059711 | MS.gene48646 | 0.805942 | 1.05E-49 | -1.69E-46 |
| MS.gene059718 | MS.gene48646 | 0.85864 | 7.17E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene48646 | 0.823252 | 1.53E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene48646 | 0.848096 | 7.62E-60 | -1.69E-46 |
| MS.gene059865 | MS.gene48646 | 0.898119 | 7.25E-77 | -1.69E-46 |
| MS.gene05995 | MS.gene48646 | 0.808011 | 3.82E-50 | -1.69E-46 |
| MS.gene05996 | MS.gene48646 | 0.808648 | 2.79E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene48646 | 0.893009 | 9.36E-75 | -1.69E-46 |
| MS.gene06027 | MS.gene48646 | 0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene060295 | MS.gene48646 | 0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene48646 | 0.878641 | 2.38E-69 | -1.69E-46 |
| MS.gene060482 | MS.gene48646 | 0.878128 | 3.61E-69 | -1.69E-46 |
| MS.gene060593 | MS.gene48646 | -0.821569 | 3.77E-53 | -1.69E-46 |
| MS.gene060595 | MS.gene48646 | -0.822781 | 1.97E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene48646 | 0.821131 | 4.75E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene48646 | 0.838256 | 3.20E-57 | -1.69E-46 |
| MS.gene060778 | MS.gene48646 | 0.908207 | 2.20E-81 | -1.69E-46 |
| MS.gene06077 | MS.gene48646 | 0.875477 | 2.99E-68 | -1.69E-46 |
| MS.gene060804 | MS.gene48646 | 0.80455 | 2.05E-49 | -1.69E-46 |
| MS.gene060835 | MS.gene48646 | 0.879636 | 1.06E-69 | -1.69E-46 |
| MS.gene060837 | MS.gene48646 | 0.862581 | 4.58E-64 | -1.69E-46 |
| MS.gene06092 | MS.gene48646 | 0.85026 | 1.90E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene48646 | 0.90296 | 5.67E-79 | -1.69E-46 |
| MS.gene060982 | MS.gene48646 | 0.901607 | 2.26E-78 | -1.69E-46 |
| MS.gene061150 | MS.gene48646 | 0.802245 | 6.15E-49 | -1.69E-46 |
| MS.gene061218 | MS.gene48646 | 0.806075 | 9.81E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48646.t1 | MTR_4g032805 | 96.371 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 0.0 | 498 |
| MS.gene48646.t1 | MTR_2g097690 | 50.000 | 62 | 29 | 1 | 109 | 170 | 77 | 136 | 3.52e-12 | 63.9 |
| MS.gene48646.t1 | MTR_5g022180 | 36.264 | 91 | 55 | 2 | 87 | 176 | 53 | 141 | 7.03e-12 | 62.4 |
| MS.gene48646.t1 | MTR_2g097690 | 50.000 | 64 | 30 | 1 | 107 | 170 | 75 | 136 | 1.34e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene48646.t1 | AT4G09350 | 59.389 | 229 | 82 | 3 | 20 | 247 | 28 | 246 | 8.25e-96 | 281 |
| MS.gene48646.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 2.68e-11 | 62.4 |
| MS.gene48646.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.21e-11 | 61.6 |
| MS.gene48646.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.21e-11 | 61.6 |
| MS.gene48646.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.88e-11 | 61.2 |
| MS.gene48646.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.88e-11 | 61.2 |
Find 39 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACCCAAAAGCTTCTT+AGG | 0.196506 | 4.1:-67979362 | None:intergenic |
| CTACTATTCAATCCAATCTT+AGG | 0.223430 | 4.1:+67979128 | MS.gene48646:CDS |
| GAATATTTGTGCAGATTCTT+AGG | 0.256272 | 4.1:+67980089 | MS.gene48646:intron |
| TCTTATTCTTCTTATTGTTT+TGG | 0.269689 | 4.1:-67979156 | None:intergenic |
| GGAGAAACCTAAGAAGCTTT+TGG | 0.298843 | 4.1:+67979355 | MS.gene48646:CDS |
| TGCATTTGTTTGTTGCTGTT+TGG | 0.332246 | 4.1:-67979330 | None:intergenic |
| ATTGCTTCTACATCAGCTTC+TGG | 0.336747 | 4.1:-67980119 | None:intergenic |
| GCAAGTTCATGCTTCTACTA+AGG | 0.365942 | 4.1:+67979220 | MS.gene48646:CDS |
| GAAACTGAAAATAAAATTAG+AGG | 0.366458 | 4.1:+67980322 | MS.gene48646:CDS |
| AGAGGGAGTGAAGTTGTGTC+TGG | 0.393350 | 4.1:-67980179 | None:intergenic |
| AAGCAATCAAAGTAGCATTC+AGG | 0.395851 | 4.1:+67980135 | MS.gene48646:CDS |
| AAAGTAGAAGATTCTATGAT+TGG | 0.404469 | 4.1:+67980264 | MS.gene48646:CDS |
| TTCTTCAAGGCTACCTCATA+AGG | 0.409509 | 4.1:-67980347 | None:intergenic |
| CAAACTGTAGTGAGAGTTTG+AGG | 0.431351 | 4.1:-67979198 | None:intergenic |
| GGATTGAATAGTAGAATTTG+TGG | 0.442017 | 4.1:-67979119 | None:intergenic |
| AACAGGTTCATAATTCTTCA+AGG | 0.442631 | 4.1:-67980360 | None:intergenic |
| CCAAGACGATCAACCATGTC+TGG | 0.451377 | 4.1:-67980383 | None:intergenic |
| CGATCAACCATGTCTGGAAC+AGG | 0.460674 | 4.1:-67980377 | None:intergenic |
| GATGATGAAGGTTGGATTGG+AGG | 0.480496 | 4.1:+67979302 | MS.gene48646:CDS |
| AATAGTAGAATTTGTGGAGA+AGG | 0.498829 | 4.1:-67979113 | None:intergenic |
| AAAATTAGAGGATCCTTATG+AGG | 0.498846 | 4.1:+67980334 | MS.gene48646:CDS |
| TACATGAGTGATACAGCATA+TGG | 0.500284 | 4.1:-67980477 | None:intergenic |
| AATGATGATGAAGGTTGGAT+TGG | 0.510553 | 4.1:+67979299 | MS.gene48646:CDS |
| TGGATTCTTGTGTCAACTCC+AGG | 0.515932 | 4.1:-67979269 | None:intergenic |
| GGGAGAATGATGATGAAGGT+TGG | 0.524754 | 4.1:+67979294 | MS.gene48646:CDS |
| CTTCATCATCATTCTCCCAA+TGG | 0.525735 | 4.1:-67979289 | None:intergenic |
| GACTTGCAACTTCTTGAGCA+AGG | 0.527830 | 4.1:-67980289 | None:intergenic |
| GACATGGTTGATCGTCTTGG+TGG | 0.530101 | 4.1:+67980386 | MS.gene48646:CDS |
| CCAGACATGGTTGATCGTCT+TGG | 0.532935 | 4.1:+67980383 | MS.gene48646:CDS |
| AGTTGACACAAGAATCCATT+GGG | 0.545872 | 4.1:+67979274 | MS.gene48646:CDS |
| TTATGAACCTGTTCCAGACA+TGG | 0.570153 | 4.1:+67980370 | MS.gene48646:CDS |
| ACTTGCAACTTCTTGAGCAA+GGG | 0.574767 | 4.1:-67980288 | None:intergenic |
| AGCATTCAGGAAACTTTCAA+AGG | 0.585269 | 4.1:+67980148 | MS.gene48646:CDS |
| ACATGGTTGATCGTCTTGGT+GGG | 0.606623 | 4.1:+67980387 | MS.gene48646:CDS |
| CATTGGGAGAATGATGATGA+AGG | 0.623650 | 4.1:+67979290 | MS.gene48646:CDS |
| GAGTTGACACAAGAATCCAT+TGG | 0.644255 | 4.1:+67979273 | MS.gene48646:CDS |
| ACAGCAACAAACAAATGCAG+AGG | 0.656916 | 4.1:+67979334 | MS.gene48646:CDS |
| GCTTCTACTAAGGACACTCA+AGG | 0.674014 | 4.1:+67979230 | MS.gene48646:CDS |
| ATTCTTGTGTCAACTCCAGG+TGG | 0.739348 | 4.1:-67979266 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAGAATAAGATTTTTT+AGG | + | chr4.1:67979165-67979184 | MS.gene48646:CDS | 15.0% |
| !!! | TAGTTTAAAATTGAATTTCA+AGG | - | chr4.1:67979519-67979538 | None:intergenic | 15.0% |
| !! | GAAACTGAAAATAAAATTAG+AGG | + | chr4.1:67980322-67980341 | MS.gene48646:CDS | 20.0% |
| !!! | ATTAAATTCTGTTTTTCTTC+AGG | + | chr4.1:67979937-67979956 | MS.gene48646:intron | 20.0% |
| !!! | CGTTTTAAAAAAAGAAAAAC+TGG | + | chr4.1:67979980-67979999 | MS.gene48646:intron | 20.0% |
| !!! | TAATTTCATGAATTTTTCTG+AGG | - | chr4.1:67980213-67980232 | None:intergenic | 20.0% |
| !!! | TCTTATTCTTCTTATTGTTT+TGG | - | chr4.1:67979159-67979178 | None:intergenic | 20.0% |
| !!! | TTTATACTTTTTGTAGGAAA+CGG | - | chr4.1:67979443-67979462 | None:intergenic | 20.0% |
| ! | AAAGTAGAAGATTCTATGAT+TGG | + | chr4.1:67980264-67980283 | MS.gene48646:CDS | 25.0% |
| ! | AGACTAAAACAACTATTAGT+CGG | + | chr4.1:67979772-67979791 | MS.gene48646:intron | 25.0% |
| !! | TTATTTTCAGTTTCTCTTGT+TGG | - | chr4.1:67980316-67980335 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTATACTTTTTGT+AGG | - | chr4.1:67979449-67979468 | None:intergenic | 25.0% |
| AAAATTAGAGGATCCTTATG+AGG | + | chr4.1:67980334-67980353 | MS.gene48646:CDS | 30.0% | |
| AACAGGTTCATAATTCTTCA+AGG | - | chr4.1:67980363-67980382 | None:intergenic | 30.0% | |
| AATAGTAGAATTTGTGGAGA+AGG | - | chr4.1:67979116-67979135 | None:intergenic | 30.0% | |
| AGTTCGTATAAGTATGTGTT+TGG | + | chr4.1:67979540-67979559 | MS.gene48646:intron | 30.0% | |
| ATGTCAGAGTTTGATCAAAA+AGG | - | chr4.1:67979807-67979826 | None:intergenic | 30.0% | |
| CTACTATTCAATCCAATCTT+AGG | + | chr4.1:67979128-67979147 | MS.gene48646:CDS | 30.0% | |
| GAATATTTGTGCAGATTCTT+AGG | + | chr4.1:67980089-67980108 | MS.gene48646:intron | 30.0% | |
| GGATTGAATAGTAGAATTTG+TGG | - | chr4.1:67979122-67979141 | None:intergenic | 30.0% | |
| GGCAAAATTCAGTTTACAAT+CGG | - | chr4.1:67979498-67979517 | None:intergenic | 30.0% | |
| TCAGCTAATGTTGAATAGTT+TGG | + | chr4.1:67979720-67979739 | MS.gene48646:intron | 30.0% | |
| TGACAAGAGTTACTGAATAA+TGG | + | chr4.1:67980067-67980086 | MS.gene48646:intron | 30.0% | |
| TGATCAAACTCTGACATAAT+CGG | + | chr4.1:67979810-67979829 | MS.gene48646:intron | 30.0% | |
| TTTCTCATGATACAAATCTC+TGG | - | chr4.1:67980032-67980051 | None:intergenic | 30.0% | |
| ! | AACCACTTCGATTTTCTATT+AGG | + | chr4.1:67979471-67979490 | MS.gene48646:intron | 30.0% |
| ! | ACATAATCGGTACATGTTTT+GGG | + | chr4.1:67979823-67979842 | MS.gene48646:intron | 30.0% |
| ! | AGTTATACTTAGTGCTCTTT+TGG | - | chr4.1:67979692-67979711 | None:intergenic | 30.0% |
| ! | CGGTGGTTTTTATAAAATCA+CGG | - | chr4.1:67979663-67979682 | None:intergenic | 30.0% |
| ! | CGTGATTTTATAAAAACCAC+CGG | + | chr4.1:67979661-67979680 | MS.gene48646:intron | 30.0% |
| ! | TAGAAAATCGAAGTGGTTTT+TGG | - | chr4.1:67979469-67979488 | None:intergenic | 30.0% |
| AAGCAATCAAAGTAGCATTC+AGG | + | chr4.1:67980135-67980154 | MS.gene48646:CDS | 35.0% | |
| AGCATTCAGGAAACTTTCAA+AGG | + | chr4.1:67980148-67980167 | MS.gene48646:CDS | 35.0% | |
| AGTTGACACAAGAATCCATT+GGG | + | chr4.1:67979274-67979293 | MS.gene48646:CDS | 35.0% | |
| ATCTCTGGTAACTAGTAAGT+TGG | - | chr4.1:67980017-67980036 | None:intergenic | 35.0% | |
| GACCTAATAGAAAATCGAAG+TGG | - | chr4.1:67979476-67979495 | None:intergenic | 35.0% | |
| TACATGAGTGATACAGCATA+TGG | - | chr4.1:67980480-67980499 | None:intergenic | 35.0% | |
| TACGACTTGAGTTCAATTGT+TGG | + | chr4.1:67979744-67979763 | MS.gene48646:intron | 35.0% | |
| ! | AATGATGATGAAGGTTGGAT+TGG | + | chr4.1:67979299-67979318 | MS.gene48646:CDS | 35.0% |
| ! | GACATAATCGGTACATGTTT+TGG | + | chr4.1:67979822-67979841 | MS.gene48646:intron | 35.0% |
| ! | GAGAAACCTAAGAAGCTTTT+GGG | + | chr4.1:67979356-67979375 | MS.gene48646:CDS | 35.0% |
| ! | TGCATTTGTTTGTTGCTGTT+TGG | - | chr4.1:67979333-67979352 | None:intergenic | 35.0% |
| !! | AAAGCTTGCTTTTGTAGCTT+CGG | - | chr4.1:67979620-67979639 | None:intergenic | 35.0% |
| !!! | GCTGATTTGCTCAATTTTCA+AGG | + | chr4.1:67979389-67979408 | MS.gene48646:CDS | 35.0% |
| !!! | GTTTTGGTGTTTCCTAAGAT+TGG | - | chr4.1:67979143-67979162 | None:intergenic | 35.0% |
| !!! | TGTTTGGACTAGCTTTTACA+AGG | + | chr4.1:67979556-67979575 | MS.gene48646:intron | 35.0% |
| !!! | TTTCTGAGGCTGTTTTTAGA+GGG | - | chr4.1:67980199-67980218 | None:intergenic | 35.0% |
| !!! | TTTTCTGAGGCTGTTTTTAG+AGG | - | chr4.1:67980200-67980219 | None:intergenic | 35.0% |
| ACAGCAACAAACAAATGCAG+AGG | + | chr4.1:67979334-67979353 | MS.gene48646:CDS | 40.0% | |
| ACTTGCAACTTCTTGAGCAA+GGG | - | chr4.1:67980291-67980310 | None:intergenic | 40.0% | |
| ATTGCTTCTACATCAGCTTC+TGG | - | chr4.1:67980122-67980141 | None:intergenic | 40.0% | |
| CAAACTGTAGTGAGAGTTTG+AGG | - | chr4.1:67979201-67979220 | None:intergenic | 40.0% | |
| CTTCATCATCATTCTCCCAA+TGG | - | chr4.1:67979292-67979311 | None:intergenic | 40.0% | |
| GAGTTGACACAAGAATCCAT+TGG | + | chr4.1:67979273-67979292 | MS.gene48646:CDS | 40.0% | |
| GCAAGTTCATGCTTCTACTA+AGG | + | chr4.1:67979220-67979239 | MS.gene48646:CDS | 40.0% | |
| TCTTCACCCAAAAGCTTCTT+AGG | - | chr4.1:67979365-67979384 | None:intergenic | 40.0% | |
| TTATGAACCTGTTCCAGACA+TGG | + | chr4.1:67980370-67980389 | MS.gene48646:CDS | 40.0% | |
| TTCTTCAAGGCTACCTCATA+AGG | - | chr4.1:67980350-67980369 | None:intergenic | 40.0% | |
| ! | CATTGGGAGAATGATGATGA+AGG | + | chr4.1:67979290-67979309 | MS.gene48646:CDS | 40.0% |
| ! | GGAGAAACCTAAGAAGCTTT+TGG | + | chr4.1:67979355-67979374 | MS.gene48646:CDS | 40.0% |
| !! | AAGCTTGCTTTTGTAGCTTC+GGG | - | chr4.1:67979619-67979638 | None:intergenic | 40.0% |
| !! | TTTTCACGTATAGCTTGCCT+CGG | - | chr4.1:67979595-67979614 | None:intergenic | 40.0% |
| !!! | TAGTGCTCTTTTGGTTTAGC+CGG | - | chr4.1:67979683-67979702 | None:intergenic | 40.0% |
| ACATGGTTGATCGTCTTGGT+GGG | + | chr4.1:67980387-67980406 | MS.gene48646:CDS | 45.0% | |
| ATTCTTGTGTCAACTCCAGG+TGG | - | chr4.1:67979269-67979288 | None:intergenic | 45.0% | |
| GACTTGCAACTTCTTGAGCA+AGG | - | chr4.1:67980292-67980311 | None:intergenic | 45.0% | |
| GCTTCTACTAAGGACACTCA+AGG | + | chr4.1:67979230-67979249 | MS.gene48646:CDS | 45.0% | |
| TGGATTCTTGTGTCAACTCC+AGG | - | chr4.1:67979272-67979291 | None:intergenic | 45.0% | |
| ! | GATGATGAAGGTTGGATTGG+AGG | + | chr4.1:67979302-67979321 | MS.gene48646:CDS | 45.0% |
| ! | GGGAGAATGATGATGAAGGT+TGG | + | chr4.1:67979294-67979313 | MS.gene48646:CDS | 45.0% |
| ! | TTTCACGTATAGCTTGCCTC+GGG | - | chr4.1:67979594-67979613 | None:intergenic | 45.0% |
| AAGGCAAATATCACGTCCCG+AGG | + | chr4.1:67979575-67979594 | MS.gene48646:intron | 50.0% | |
| AGAGGGAGTGAAGTTGTGTC+TGG | - | chr4.1:67980182-67980201 | None:intergenic | 50.0% | |
| CCAAGACGATCAACCATGTC+TGG | - | chr4.1:67980386-67980405 | None:intergenic | 50.0% | |
| CCAGACATGGTTGATCGTCT+TGG | + | chr4.1:67980383-67980402 | MS.gene48646:CDS | 50.0% | |
| GACATGGTTGATCGTCTTGG+TGG | + | chr4.1:67980386-67980405 | MS.gene48646:CDS | 50.0% | |
| ! | CGATCAACCATGTCTGGAAC+AGG | - | chr4.1:67980380-67980399 | None:intergenic | 50.0% |
| !! | ACTCCAGGTGGTGCTTTTTG+TGG | - | chr4.1:67979257-67979276 | None:intergenic | 50.0% |
| !!! | TGCTCTTTTGGTTTAGCCGG+TGG | - | chr4.1:67979680-67979699 | None:intergenic | 50.0% |
| !! | GGACCACAAAAAGCACCACC+TGG | + | chr4.1:67979251-67979270 | MS.gene48646:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 67979095 | 67980520 | 67979095 | ID=MS.gene48646 |
| chr4.1 | mRNA | 67979095 | 67980520 | 67979095 | ID=MS.gene48646.t1;Parent=MS.gene48646 |
| chr4.1 | exon | 67979095 | 67979423 | 67979095 | ID=MS.gene48646.t1.exon1;Parent=MS.gene48646.t1 |
| chr4.1 | CDS | 67979095 | 67979423 | 67979095 | ID=cds.MS.gene48646.t1;Parent=MS.gene48646.t1 |
| chr4.1 | exon | 67980103 | 67980520 | 67980103 | ID=MS.gene48646.t1.exon2;Parent=MS.gene48646.t1 |
| chr4.1 | CDS | 67980103 | 67980520 | 67980103 | ID=cds.MS.gene48646.t1;Parent=MS.gene48646.t1 |
| Gene Sequence |
| Protein sequence |
