AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061887

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061887.t1 MTR_7g099710 96.310 813 30 0 1 813 1 813 0.0 1623
MS.gene061887.t1 MTR_2g096670 39.191 791 458 7 14 797 18 792 0.0 544
MS.gene061887.t1 MTR_7g073075 86.869 99 10 1 74 169 9 107 7.15e-49 169
MS.gene061887.t1 MTR_7g063050 84.848 99 12 1 74 169 9 107 1.22e-46 162
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061887.t1 AT3G09450 39.059 786 439 15 18 786 9 771 1.04e-170 512
MS.gene061887.t1 AT2G28780 36.005 811 480 12 14 811 10 794 9.84e-164 495

Find 170 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAAAGATTTGTGGATTTA+AGG 0.118879 7.2:-12221832 MS.gene061887:CDS
CTGAAATGGAGCCAAATTTC+TGG 0.203476 7.2:-12221406 MS.gene061887:CDS
AATTTAATGTAACCCTTTAT+AGG 0.227954 7.2:+12225270 None:intergenic
AAATCTTGCAGTTTCTCTTC+TGG 0.237975 7.2:+12222451 None:intergenic
AAATAAAAGAACTACTTATA+TGG 0.256780 7.2:-12220878 MS.gene061887:CDS
CGTCAACAAGTGTGTCGATT+TGG 0.272339 7.2:+12225038 None:intergenic
GCAATGTCCATCCCTCTTAT+TGG 0.275470 7.2:+12222421 None:intergenic
TTGAAGTTTGTTTGACTTGC+GGG 0.279387 7.2:+12220849 None:intergenic
TATAGTACCCCGACTCAATT+TGG 0.282417 7.2:-12221689 MS.gene061887:CDS
ATATAGCCCTCAACCTATAA+AGG 0.287495 7.2:-12225283 MS.gene061887:CDS
ACCTTAAATCCACAAATCTT+TGG 0.287928 7.2:+12221831 None:intergenic
AGTAGAATGTATGGGGAATC+TGG 0.291832 7.2:-12221761 MS.gene061887:CDS
AATCTTGCAGTTTCTCTTCT+GGG 0.294105 7.2:+12222452 None:intergenic
AATGGTACGAACCAGAAATT+TGG 0.300415 7.2:+12221395 None:intergenic
TTATAGGTTGAGGGCTATAT+AGG 0.300994 7.2:+12225286 None:intergenic
AGAAGAGAAACTGCAAGATT+TGG 0.304292 7.2:-12222449 MS.gene061887:CDS
GGGCAATTTCGACAGTTATA+GGG 0.304373 7.2:-12221739 MS.gene061887:CDS
ATCTCAATGCAGACACATTT+AGG 0.311938 7.2:-12221088 MS.gene061887:CDS
GGGGCAATTTCGACAGTTAT+AGG 0.317765 7.2:-12221740 MS.gene061887:CDS
ATGATAGGGATAATGCATAT+TGG 0.349199 7.2:-12221976 MS.gene061887:CDS
TGGAGCTATAGCTTCTGTTC+TGG 0.352610 7.2:-12224905 MS.gene061887:CDS
GCTGCGCTGGCAGTGGCTAC+CGG 0.363670 7.2:-12225081 MS.gene061887:CDS
GAACAAAACATTTAGCTTGC+TGG 0.368168 7.2:+12222302 None:intergenic
CAAACGCTCGCTGAGCTTGT+TGG 0.371401 7.2:+12222087 None:intergenic
CATACAGTTGCCGAAGTTAT+CGG 0.375339 7.2:+12225104 None:intergenic
TCCTGTTGTGGAGAGGTACT+TGG 0.379008 7.2:+12222689 None:intergenic
GTCAACAAGTGTGTCGATTT+GGG 0.380204 7.2:+12225039 None:intergenic
AAGCATCTCCTCATCTTTGT+TGG 0.382037 7.2:+12220983 None:intergenic
CAATCTGCTTAATGCAATCT+TGG 0.385334 7.2:+12221543 None:intergenic
CCAGTGTAGTTGTGATACTA+TGG 0.386508 7.2:+12222655 None:intergenic
GCTAGAGTTGCAGCTCTTGA+GGG 0.389237 7.2:+12221599 None:intergenic
TCCTTGGTTTGATATATGAT+AGG 0.391420 7.2:-12221991 MS.gene061887:CDS
ACCTTAGCATGCAGCATAGT+TGG 0.394869 7.2:-12225318 MS.gene061887:CDS
CTGTATGGCTGCGCTGGCAG+TGG 0.396194 7.2:-12225088 MS.gene061887:CDS
TTTAAGTCCTCTCTGTCATT+AGG 0.398749 7.2:-12222025 MS.gene061887:CDS
TTAGGCTTTGCCGTGTTCCT+TGG 0.401857 7.2:-12222007 MS.gene061887:CDS
CTCAGGCAAAGTAGAATGTA+TGG 0.402439 7.2:-12221770 MS.gene061887:CDS
TGATAGGGATAATGCATATT+GGG 0.402750 7.2:-12221975 MS.gene061887:CDS
TATAGGTTGAGGGCTATATA+GGG 0.405330 7.2:+12225287 None:intergenic
ATGTAACCCTTTATAGGTTG+AGG 0.416760 7.2:+12225276 None:intergenic
ATTTACAGCAGAAGCTGAAA+TGG 0.417428 7.2:-12221420 MS.gene061887:CDS
GTGACGCCGTTAGAGGTTGT+TGG 0.421688 7.2:-12225191 MS.gene061887:CDS
ACCACCTTCTTTAAAATGTC+AGG 0.424833 7.2:-12225408 None:intergenic
ACACTTGGTGACGCCGTTAG+AGG 0.424878 7.2:-12225198 MS.gene061887:CDS
TATTTCTCTCATCAAGCTAC+TGG 0.426451 7.2:+12220917 None:intergenic
AAAGATCAAGCTTTGGTGGC+TGG 0.427921 7.2:+12222051 None:intergenic
TCCTCATCAATAACACCAAC+AGG 0.430311 7.2:+12222376 None:intergenic
GTTGCAAACGCACGAGGAAC+AGG 0.431175 7.2:-12221899 MS.gene061887:CDS
ATACAGTTGCCGAAGTTATC+GGG 0.436138 7.2:+12225105 None:intergenic
TGCTAGAGTTGCAGCTCTTG+AGG 0.437675 7.2:+12221598 None:intergenic
CGACACACTTGTTGACGAAA+AGG 0.437706 7.2:-12225032 MS.gene061887:CDS
GCCAAGTACCTCTCCACAAC+AGG 0.438296 7.2:-12222690 MS.gene061887:CDS
GAGCTTGTTGGAGCTACATT+GGG 0.441738 7.2:+12222099 None:intergenic
GACGACGTATCTCTTTCGTT+AGG 0.445242 7.2:+12221509 None:intergenic
TGCCCCAATATTGAAAAGCT+TGG 0.446043 7.2:-12221198 MS.gene061887:CDS
TGAGTTGTGGTTGCATCAAA+AGG 0.447219 7.2:+12222280 None:intergenic
TGTAACCCTTTATAGGTTGA+GGG 0.455045 7.2:+12225277 None:intergenic
CGATAACTTCGGCAACTGTA+TGG 0.455133 7.2:-12225103 MS.gene061887:CDS
TGCTGCCCCTGCCCTATCCT+CGG 0.456066 7.2:-12224876 MS.gene061887:CDS
AATAAAAGAACTACTTATAT+GGG 0.456542 7.2:-12220877 MS.gene061887:CDS
AAGATCAAGCTTTGGTGGCT+GGG 0.457294 7.2:+12222052 None:intergenic
TTGACGAAAAGGATTGCATA+TGG 0.458789 7.2:-12225021 MS.gene061887:CDS
CCTTGGTTTGATATATGATA+GGG 0.460011 7.2:-12221990 MS.gene061887:CDS
ATAGGGGCCTTGTTGATCCT+TGG 0.460671 7.2:-12221722 MS.gene061887:CDS
TAGCAACTCCAAATTGAGTC+GGG 0.464180 7.2:+12221681 None:intergenic
CTGTAGCAGGTAGTATGAAA+TGG 0.464656 7.2:+12221377 None:intergenic
TCAATTTGGAGTTGCTAGAA+TGG 0.465771 7.2:-12221675 MS.gene061887:CDS
GTGGCTTGTTCCACTGCACT+TGG 0.469029 7.2:-12224925 MS.gene061887:CDS
TAAATGCAAAGATCAAGCTT+TGG 0.470566 7.2:+12222044 None:intergenic
TATAGCCCTCAACCTATAAA+GGG 0.471608 7.2:-12225282 MS.gene061887:CDS
GAGTTGGAAATTATTGTTTG+AGG 0.472419 7.2:+12222487 None:intergenic
TACCTGCTACAGCAATATGC+TGG 0.475447 7.2:-12221366 MS.gene061887:CDS
ACGACGTATCTCTTTCGTTA+GGG 0.475646 7.2:+12221510 None:intergenic
CGGCAACTGTATGGCTGCGC+TGG 0.476765 7.2:-12225094 MS.gene061887:CDS
AATGGAGCATGTCTCACAAT+TGG 0.477649 7.2:-12221297 MS.gene061887:CDS
TGGGTCAATGCAACAAGAGT+TGG 0.479221 7.2:+12222471 None:intergenic
GAGATTAAATTGCAATATAG+AGG 0.485208 7.2:-12222760 MS.gene061887:CDS
GGTTCTTAGCTCTTATACCA+TGG 0.486589 7.2:-12221811 MS.gene061887:CDS
GTAGAATGTATGGGGAATCT+GGG 0.489062 7.2:-12221760 MS.gene061887:CDS
GATTTGGAAATACCAATAAG+AGG 0.489960 7.2:-12222433 MS.gene061887:CDS
CAACATCTAGAGGAAATTGC+TGG 0.490184 7.2:-12221017 MS.gene061887:CDS
TGAGCTTGTTGGAGCTACAT+TGG 0.496289 7.2:+12222098 None:intergenic
TGAGTTGTCTGAGGCTGAGA+TGG 0.496938 7.2:+12222737 None:intergenic
AGTGGCTACCGGTGCATTTG+TGG 0.499348 7.2:-12225070 MS.gene061887:CDS
ATGCAAAGATCAAGCTTTGG+TGG 0.499399 7.2:+12222047 None:intergenic
ATGTAAGCAAACCGAGGATA+GGG 0.500818 7.2:+12224865 None:intergenic
AAAACAGGATGGCATGCATT+GGG 0.501602 7.2:-12222515 MS.gene061887:intron
TATGAGAATTGTTGTGACAT+AGG 0.502472 7.2:+12225236 None:intergenic
AGAATGGCAGAGGCTACAAT+AGG 0.502981 7.2:-12221659 MS.gene061887:CDS
GATATTGAACAGAGATGAAG+AGG 0.505008 7.2:-12221066 MS.gene061887:CDS
TCCTCGGTTTGCTTACATTG+AGG 0.507319 7.2:-12224860 MS.gene061887:intron
CAGCAATTTCCTCTAGATGT+TGG 0.511945 7.2:+12221018 None:intergenic
TTTGAAGTTTGTTTGACTTG+CGG 0.514256 7.2:+12220848 None:intergenic
TCCCAGCATATTGCTGTAGC+AGG 0.515445 7.2:+12221364 None:intergenic
ACGAGGAACAGGAACAGCTA+TGG 0.522977 7.2:-12221888 MS.gene061887:CDS
AATGTAAGCAAACCGAGGAT+AGG 0.523686 7.2:+12224864 None:intergenic
ACAGCTATGGGATCAATCTA+CGG 0.523889 7.2:-12221875 MS.gene061887:CDS
CAATTTCCTCTAGATGTTGG+AGG 0.527126 7.2:+12221021 None:intergenic
TGGATGGATATTCAAGGTCA+AGG 0.528602 7.2:-12221254 MS.gene061887:CDS
TCAGACAACTCAACTGCTGT+TGG 0.529606 7.2:-12222726 MS.gene061887:CDS
TCCTGTTGGTGTTATTGATG+AGG 0.529816 7.2:-12222377 MS.gene061887:CDS
TTGTTTCATTTCTTGAGTTG+TGG 0.530301 7.2:+12222267 None:intergenic
ATTGCAATTAGTTTCGTGAC+TGG 0.533410 7.2:-12221941 MS.gene061887:CDS
ATGTATTCTCAATGTATAGT+TGG 0.537132 7.2:+12222787 None:intergenic
CTCTTTCCTCCAACATCTAG+AGG 0.537612 7.2:-12221027 MS.gene061887:CDS
GTTCTTAGCTCTTATACCAT+GGG 0.540055 7.2:-12221810 MS.gene061887:CDS
ATAGGGCAGGGGCAGCAACA+TGG 0.541183 7.2:+12224882 None:intergenic
CGAGGAACAGGAACAGCTAT+GGG 0.541244 7.2:-12221887 MS.gene061887:CDS
GAGAAGCTTGGCTCCTGTTG+TGG 0.542438 7.2:+12222677 None:intergenic
TATTCTCAATGTATAGTTGG+TGG 0.542668 7.2:+12222790 None:intergenic
GGCAATTTCGACAGTTATAG+GGG 0.544984 7.2:-12221738 MS.gene061887:CDS
TGTGATACTATGGAGAAGCT+TGG 0.546804 7.2:+12222665 None:intergenic
GAGTTGTTTCGAACTCGTCT+TGG 0.547127 7.2:-12225357 MS.gene061887:CDS
CTAGAGTTGCAGCTCTTGAG+GGG 0.547420 7.2:+12221600 None:intergenic
GCAATCTTGGAGTGTTCTGA+AGG 0.547626 7.2:+12221556 None:intergenic
TCAGGCAAAGTAGAATGTAT+GGG 0.550366 7.2:-12221769 MS.gene061887:CDS
ACCAACTATGCTGCATGCTA+AGG 0.552023 7.2:+12225317 None:intergenic
GTAATTTGGATGGATATTCA+AGG 0.552135 7.2:-12221260 MS.gene061887:CDS
ATATGCTGGGATCTCTATCA+AGG 0.556800 7.2:-12221352 MS.gene061887:CDS
AAAAGATGGAGTAATTTGGA+TGG 0.561145 7.2:-12221270 MS.gene061887:CDS
AAGCAAACCGAGGATAGGGC+AGG 0.561371 7.2:+12224869 None:intergenic
CAGCTATGGGATCAATCTAC+GGG 0.561809 7.2:-12221874 MS.gene061887:CDS
AGGGATAATGCATATTGGGC+GGG 0.562602 7.2:-12221971 MS.gene061887:CDS
TGGAGTTGCTAGAATGGCAG+AGG 0.563730 7.2:-12221669 MS.gene061887:CDS
GGATGGATATTCAAGGTCAA+GGG 0.566079 7.2:-12221253 MS.gene061887:CDS
GGGCCTTGTTGATCCTTGGT+AGG 0.569678 7.2:-12221718 MS.gene061887:CDS
CTAGCAACTCCAAATTGAGT+CGG 0.575057 7.2:+12221680 None:intergenic
ACCTGCTACAGCAATATGCT+GGG 0.575756 7.2:-12221365 MS.gene061887:CDS
CGACGTATCTCTTTCGTTAG+GGG 0.576170 7.2:+12221511 None:intergenic
GTTATACATGGTGCACAAGA+AGG 0.578194 7.2:-12224970 MS.gene061887:CDS
GTTGTGACATAGGAAATAGA+TGG 0.579686 7.2:+12225246 None:intergenic
ATTCTCATAGTGTTGTCTGA+TGG 0.580392 7.2:-12225222 MS.gene061887:CDS
TAGATTTACTATGTTTGCAG+AGG 0.581958 7.2:+12220804 None:intergenic
AACATGCCAACAACCTCTAA+CGG 0.582906 7.2:+12225185 None:intergenic
TTGAAATAGACAAGTCATCT+CGG 0.590293 7.2:+12222167 None:intergenic
AGCAAACCGAGGATAGGGCA+GGG 0.590590 7.2:+12224870 None:intergenic
GCAAACCGAGGATAGGGCAG+GGG 0.590989 7.2:+12224871 None:intergenic
ATTTGGAAATACCAATAAGA+GGG 0.595637 7.2:-12222432 MS.gene061887:CDS
CAGCGCCACCACAAATGCAC+CGG 0.599257 7.2:+12225062 None:intergenic
AGCTATAGCTCCAAGTGCAG+TGG 0.600339 7.2:+12224915 None:intergenic
GGAAATACCAATAAGAGGGA+TGG 0.600471 7.2:-12222428 MS.gene061887:CDS
TCTTTCGTTAGGGGTAGTCA+TGG 0.603069 7.2:+12221520 None:intergenic
TGAAGTTTGTTTGACTTGCG+GGG 0.604383 7.2:+12220850 None:intergenic
GCGTTTGCAACTGAGAATGT+TGG 0.613666 7.2:+12221911 None:intergenic
CCCTATCATATATCAAACCA+AGG 0.614752 7.2:+12221990 None:intergenic
ATGGACATTGCTCTATCAAG+TGG 0.617499 7.2:-12222409 MS.gene061887:CDS
GTTATACGACCCGATAACTT+CGG 0.617939 7.2:-12225114 MS.gene061887:CDS
TACTATAGTTCTTCCTACCA+AGG 0.620979 7.2:+12221705 None:intergenic
CCATAGTATCACAACTACAC+TGG 0.621214 7.2:-12222655 MS.gene061887:intron
TATGTCAGCACAGTTATACA+TGG 0.621877 7.2:-12224982 MS.gene061887:CDS
CAGGCAAAGTAGAATGTATG+GGG 0.624002 7.2:-12221768 MS.gene061887:CDS
GGCTACCGGTGCATTTGTGG+TGG 0.628149 7.2:-12225067 MS.gene061887:CDS
GGCTACGCATTCAATTCATG+TGG 0.631946 7.2:-12224944 MS.gene061887:CDS
AACTCTTACCAACAAAGATG+AGG 0.633114 7.2:-12220991 MS.gene061887:CDS
TCTTGTGACTCGAGATCGTG+AGG 0.636201 7.2:+12221113 None:intergenic
GCTTGGCTCCTGTTGTGGAG+AGG 0.637405 7.2:+12222682 None:intergenic
ACATGGTGCACAAGAAGGAG+TGG 0.641976 7.2:-12224965 MS.gene061887:CDS
TTCTCAGTTGCAAACGCACG+AGG 0.643217 7.2:-12221905 MS.gene061887:CDS
GTTATTGATGAGGAGCTAAG+AGG 0.643274 7.2:-12222367 MS.gene061887:CDS
AAAGAAGAGAAAATGACCCA+TGG 0.647913 7.2:+12221794 None:intergenic
TAGGGATAATGCATATTGGG+CGG 0.652201 7.2:-12221972 MS.gene061887:CDS
ATATATCAAACCAAGGAACA+CGG 0.652287 7.2:+12221997 None:intergenic
AACAGCAGTTGAGTTGTCTG+AGG 0.659969 7.2:+12222728 None:intergenic
GCTGGGATCTCTATCAAGGA+CGG 0.660564 7.2:-12221348 MS.gene061887:CDS
CTTCCTACCAAGGATCAACA+AGG 0.665051 7.2:+12221715 None:intergenic
TAGAATGTATGGGGAATCTG+GGG 0.673349 7.2:-12221759 MS.gene061887:CDS
AGCAACTCCAAATTGAGTCG+GGG 0.676322 7.2:+12221682 None:intergenic
GTGTTGTCTGATGGAACACT+TGG 0.689623 7.2:-12225213 MS.gene061887:CDS
ACCTCAATGTAAGCAAACCG+AGG 0.693462 7.2:+12224859 None:intergenic
GGCAAAGCCTAATGACAGAG+AGG 0.719901 7.2:+12222018 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACACAAAAAAAAAAAAA+AGG + chr7.2:12221782-12221801 None:intergenic 10.0%
!! TATATTTAAAAACTTAAATC+TGG - chr7.2:12222519-12222538 MS.gene061887:intron 10.0%
!!! AAATAATACCTTTAAAAAAA+AGG - chr7.2:12222189-12222208 MS.gene061887:CDS 10.0%
!!! AATAATACCTTTAAAAAAAA+GGG - chr7.2:12222190-12222209 MS.gene061887:CDS 10.0%
!!! ATTCATTTTAATGATTAAAT+TGG + chr7.2:12222418-12222437 None:intergenic 10.0%
!!! TATTTTACAAAAATTAATGA+AGG + chr7.2:12222386-12222405 None:intergenic 10.0%
!! AAATAAAAGAACTACTTATA+TGG - chr7.2:12225327-12225346 MS.gene061887:CDS 15.0%
!! AATAAAAGAACTACTTATAT+GGG - chr7.2:12225328-12225347 MS.gene061887:CDS 15.0%
!! ATTGAATAAAAATGATCTTA+TGG + chr7.2:12221708-12221727 None:intergenic 15.0%
!!! AAAAAAAAGTTTTTTTGAAC+AGG + chr7.2:12221586-12221605 None:intergenic 15.0%
!!! ATAATACCTTTAAAAAAAAG+GGG - chr7.2:12222191-12222210 MS.gene061887:CDS 15.0%
!!! TAGATTTAATTTGAGAAAAT+AGG - chr7.2:12223029-12223048 MS.gene061887:intron 15.0%
!!! TTTTTTATAAAAAAACAGGA+TGG - chr7.2:12223679-12223698 MS.gene061887:intron 15.0%
!!! TTTTTTTTTTTTTGTTGAAG+TGG - chr7.2:12221433-12221452 MS.gene061887:CDS 15.0%
!! AATTTAATGTAACCCTTTAT+AGG + chr7.2:12220938-12220957 None:intergenic 20.0%
!! AGTATAAAAAGAATGATGTT+GGG + chr7.2:12224005-12224024 None:intergenic 20.0%
!! CAATGCCTAATATAATAATT+TGG + chr7.2:12222875-12222894 None:intergenic 20.0%
!! CATCCAATAATGTATTATTA+CGG - chr7.2:12223263-12223282 MS.gene061887:intron 20.0%
!! TAACATTGCATGTAAATTAA+AGG + chr7.2:12223221-12223240 None:intergenic 20.0%
!! TGTAAATTAAAGGAGTTTAA+TGG + chr7.2:12223211-12223230 None:intergenic 20.0%
!! TTAAAATGAGAAGCTATTTA+CGG - chr7.2:12221674-12221693 MS.gene061887:CDS 20.0%
!!! AAAAACTTAAATCTGGAATT+TGG - chr7.2:12222526-12222545 MS.gene061887:intron 20.0%
!!! AAAATCTTTGTTTTTTTGAC+TGG - chr7.2:12222812-12222831 MS.gene061887:intron 20.0%
!!! AATCACAATTTAGAATAAAC+AGG - chr7.2:12221478-12221497 MS.gene061887:CDS 20.0%
!!! ATTATTGCTATTGTTATGAT+CGG - chr7.2:12222058-12222077 MS.gene061887:CDS 20.0%
!!! TAATACCTTTAAAAAAAAGG+GGG - chr7.2:12222192-12222211 MS.gene061887:CDS 20.0%
!!! TTAGTTGGATTGTTTTTAAT+CGG + chr7.2:12222734-12222753 None:intergenic 20.0%
! AACTTCTGTAATACTATATG+TGG + chr7.2:12222950-12222969 None:intergenic 25.0%
! AATTATGTCAATTCAAACGT+TGG + chr7.2:12222478-12222497 None:intergenic 25.0%
! AGAAAAAATCATAACCTGAA+TGG + chr7.2:12221056-12221075 None:intergenic 25.0%
! AGAAACAAATTGACATTAGT+TGG + chr7.2:12222749-12222768 None:intergenic 25.0%
! AGGGGGAATAATAATATATT+TGG - chr7.2:12222209-12222228 MS.gene061887:CDS 25.0%
! ATGCCGTAATAATACATTAT+TGG + chr7.2:12223269-12223288 None:intergenic 25.0%
! ATGTATTCTCAATGTATAGT+TGG + chr7.2:12223421-12223440 None:intergenic 25.0%
! ATTTGGAAATACCAATAAGA+GGG - chr7.2:12223773-12223792 MS.gene061887:intron 25.0%
! CAGTATAAAAAGAATGATGT+TGG + chr7.2:12224006-12224025 None:intergenic 25.0%
! CGCAACCAAATTATTATATT+AGG - chr7.2:12222867-12222886 MS.gene061887:intron 25.0%
! GAATTATTATGCTAAGTGAT+GGG + chr7.2:12222684-12222703 None:intergenic 25.0%
! GAGATTAAATTGCAATATAG+AGG - chr7.2:12223445-12223464 MS.gene061887:intron 25.0%
! TCAATCATAAAGATGTTGAT+TGG + chr7.2:12222274-12222293 None:intergenic 25.0%
! TTACTTGCATCAAATTATAC+AGG + chr7.2:12222790-12222809 None:intergenic 25.0%
! TTTATGACACTTTCAAAATG+TGG - chr7.2:12222166-12222185 MS.gene061887:CDS 25.0%
!! AAAGTGTGCTTTTAATATCT+TGG + chr7.2:12223364-12223383 None:intergenic 25.0%
!!! TTATTCCCCCTTTTTTTTAA+AGG + chr7.2:12222200-12222219 None:intergenic 25.0%
!!! TTTTATTTCACTCTCAATCT+TGG + chr7.2:12225315-12225334 None:intergenic 25.0%
AAAAGATGGAGTAATTTGGA+TGG - chr7.2:12224935-12224954 MS.gene061887:CDS 30.0%
ACCTTAAATCCACAAATCTT+TGG + chr7.2:12224377-12224396 None:intergenic 30.0%
ATATATCAAACCAAGGAACA+CGG + chr7.2:12224211-12224230 None:intergenic 30.0%
ATGATAGGGATAATGCATAT+TGG - chr7.2:12224229-12224248 MS.gene061887:intron 30.0%
CAACAACAATTGCAAAAACA+AGG - chr7.2:12220822-12220841 MS.gene061887:CDS 30.0%
CACAAAAAGATGGAGTAATT+TGG - chr7.2:12224931-12224950 MS.gene061887:CDS 30.0%
CGAATTATTATGCTAAGTGA+TGG + chr7.2:12222685-12222704 None:intergenic 30.0%
GAAGCAAATTAAGTGATCTT+AGG - chr7.2:12221532-12221551 MS.gene061887:CDS 30.0%
GAGTTGGAAATTATTGTTTG+AGG + chr7.2:12223721-12223740 None:intergenic 30.0%
GATTTGGAAATACCAATAAG+AGG - chr7.2:12223772-12223791 MS.gene061887:intron 30.0%
GTAATTTGGATGGATATTCA+AGG - chr7.2:12224945-12224964 MS.gene061887:CDS 30.0%
GTCTTGTGAAAATGCTTTAT+TGG + chr7.2:12222585-12222604 None:intergenic 30.0%
TAAATGCAAAGATCAAGCTT+TGG + chr7.2:12224164-12224183 None:intergenic 30.0%
TAATATAGTTCCAAAACTCC+AGG - chr7.2:12222234-12222253 MS.gene061887:CDS 30.0%
TATGAGAATTGTTGTGACAT+AGG + chr7.2:12220972-12220991 None:intergenic 30.0%
TATTCTCAATGTATAGTTGG+TGG + chr7.2:12223418-12223437 None:intergenic 30.0%
TCCAAAGATTTGTGGATTTA+AGG - chr7.2:12224373-12224392 MS.gene061887:intron 30.0%
TGATAGGGATAATGCATATT+GGG - chr7.2:12224230-12224249 MS.gene061887:intron 30.0%
TGCAAATATACACAAACACT+TGG + chr7.2:12222634-12222653 None:intergenic 30.0%
TTGAAATAGACAAGTCATCT+CGG + chr7.2:12224041-12224060 None:intergenic 30.0%
! ACTTAAATCTGGAATTTGGA+TGG - chr7.2:12222530-12222549 MS.gene061887:intron 30.0%
! CCTTGGTTTGATATATGATA+GGG - chr7.2:12224215-12224234 MS.gene061887:intron 30.0%
! CTTCATTTTCCAAAGATTTG+TGG - chr7.2:12224365-12224384 MS.gene061887:intron 30.0%
! CTTCCAAGCTTTTCAATATT+GGG + chr7.2:12225013-12225032 None:intergenic 30.0%
! GACTATCAGTTATTTCGATT+GGG + chr7.2:12222012-12222031 None:intergenic 30.0%
! TCATTTTCTCTTCTTTTCTC+AGG - chr7.2:12224418-12224437 MS.gene061887:intron 30.0%
! TCCTTGGTTTGATATATGAT+AGG - chr7.2:12224214-12224233 MS.gene061887:intron 30.0%
! TCTTCCAAGCTTTTCAATAT+TGG + chr7.2:12225014-12225033 None:intergenic 30.0%
! TGACTATCAGTTATTTCGAT+TGG + chr7.2:12222013-12222032 None:intergenic 30.0%
! TTCCAAGCTTTTCAATATTG+GGG + chr7.2:12225012-12225031 None:intergenic 30.0%
! TTGTTTCATTTCTTGAGTTG+TGG + chr7.2:12223941-12223960 None:intergenic 30.0%
! TTTTTGTTGAAGTGGATACA+TGG - chr7.2:12221441-12221460 MS.gene061887:CDS 30.0%
!! TTTGAAGTTTGTTTGACTTG+CGG + chr7.2:12225360-12225379 None:intergenic 30.0%
AAAGAAGAGAAAATGACCCA+TGG + chr7.2:12224414-12224433 None:intergenic 35.0%
AAATCTTGCAGTTTCTCTTC+TGG + chr7.2:12223757-12223776 None:intergenic 35.0%
AACTCTTACCAACAAAGATG+AGG - chr7.2:12225214-12225233 MS.gene061887:CDS 35.0%
AATCTTGCAGTTTCTCTTCT+GGG + chr7.2:12223756-12223775 None:intergenic 35.0%
AGAAGAGAAACTGCAAGATT+TGG - chr7.2:12223756-12223775 MS.gene061887:intron 35.0%
ATATAGCCCTCAACCTATAA+AGG - chr7.2:12220922-12220941 MS.gene061887:CDS 35.0%
ATCTCAATGCAGACACATTT+AGG - chr7.2:12225117-12225136 MS.gene061887:CDS 35.0%
ATGTAACCCTTTATAGGTTG+AGG + chr7.2:12220932-12220951 None:intergenic 35.0%
ATTCTCATAGTGTTGTCTGA+TGG - chr7.2:12220983-12221002 MS.gene061887:CDS 35.0%
ATTTACAGCAGAAGCTGAAA+TGG - chr7.2:12224785-12224804 MS.gene061887:intron 35.0%
CAATCTGCTTAATGCAATCT+TGG + chr7.2:12224665-12224684 None:intergenic 35.0%
CCCTATCATATATCAAACCA+AGG + chr7.2:12224218-12224237 None:intergenic 35.0%
GATATTGAACAGAGATGAAG+AGG - chr7.2:12225139-12225158 MS.gene061887:CDS 35.0%
GTTGTGACATAGGAAATAGA+TGG + chr7.2:12220962-12220981 None:intergenic 35.0%
TACTATAGTTCTTCCTACCA+AGG + chr7.2:12224503-12224522 None:intergenic 35.0%
TATAGCCCTCAACCTATAAA+GGG - chr7.2:12220923-12220942 MS.gene061887:CDS 35.0%
TATGTCAGCACAGTTATACA+TGG - chr7.2:12221223-12221242 MS.gene061887:CDS 35.0%
TATTTCTCTCATCAAGCTAC+TGG + chr7.2:12225291-12225310 None:intergenic 35.0%
TCACAATTGGCACAAAAAGA+TGG - chr7.2:12224921-12224940 MS.gene061887:CDS 35.0%
TCAGGCAAAGTAGAATGTAT+GGG - chr7.2:12224436-12224455 MS.gene061887:intron 35.0%
TGCATGAAGAGAAAGACATT+TGG - chr7.2:12222650-12222669 MS.gene061887:intron 35.0%
TTAGTTTATTCGCAACTGCT+AGG + chr7.2:12223642-12223661 None:intergenic 35.0%
TTGACGAAAAGGATTGCATA+TGG - chr7.2:12221184-12221203 MS.gene061887:CDS 35.0%
TTTAAGTCCTCTCTGTCATT+AGG - chr7.2:12224180-12224199 MS.gene061887:intron 35.0%
! AGATTTTTGTAGGCTATGGA+TGG + chr7.2:12223982-12224001 None:intergenic 35.0%
! AGGTTGTTGGCATGTTTTAT+TGG - chr7.2:12221027-12221046 MS.gene061887:CDS 35.0%
! ATTGCAATTAGTTTCGTGAC+TGG - chr7.2:12224264-12224283 MS.gene061887:intron 35.0%
! GATTTTTGTAGGCTATGGAT+GGG + chr7.2:12223981-12224000 None:intergenic 35.0%
! GTTCTTAGCTCTTATACCAT+GGG - chr7.2:12224395-12224414 MS.gene061887:intron 35.0%
! TATAGGTTGAGGGCTATATA+GGG + chr7.2:12220921-12220940 None:intergenic 35.0%
! TCAATTTGGAGTTGCTAGAA+TGG - chr7.2:12224530-12224549 MS.gene061887:intron 35.0%
! TCAGTTATTTCGATTGGGTA+TGG + chr7.2:12222007-12222026 None:intergenic 35.0%
! TGATGTTGGGAGATTTTTGT+AGG + chr7.2:12223992-12224011 None:intergenic 35.0%
! TGTAACCCTTTATAGGTTGA+GGG + chr7.2:12220931-12220950 None:intergenic 35.0%
! TTATAGGTTGAGGGCTATAT+AGG + chr7.2:12220922-12220941 None:intergenic 35.0%
!! CTTTTTCATTACAGCTGCTT+CGG - chr7.2:12225257-12225276 MS.gene061887:CDS 35.0%
!! GAACAAAACATTTAGCTTGC+TGG + chr7.2:12223906-12223925 None:intergenic 35.0%
!! TGTTTTATTGGCAACCATTC+AGG - chr7.2:12221039-12221058 MS.gene061887:CDS 35.0%
!! TTGAAGTTTGTTTGACTTGC+GGG + chr7.2:12225359-12225378 None:intergenic 35.0%
!!! TAGCTTGCTGGTCTAATTTT+TGG + chr7.2:12223894-12223913 None:intergenic 35.0%
!!! TTGCACATTGTCTTGTTTTC+AGG - chr7.2:12223382-12223401 MS.gene061887:intron 35.0%
AAAAACAGGATGGCATGCAT+TGG - chr7.2:12223689-12223708 MS.gene061887:intron 40.0%
AAAACAGGATGGCATGCATT+GGG - chr7.2:12223690-12223709 MS.gene061887:intron 40.0%
AAAACTCCAGGAATCGATTG+GGG - chr7.2:12222246-12222265 MS.gene061887:CDS 40.0%
AACATGCCAACAACCTCTAA+CGG + chr7.2:12221023-12221042 None:intergenic 40.0%
AAGCATCTCCTCATCTTTGT+TGG + chr7.2:12225225-12225244 None:intergenic 40.0%
AATGGAGCATGTCTCACAAT+TGG - chr7.2:12224908-12224927 MS.gene061887:CDS 40.0%
AATGTAAGCAAACCGAGGAT+AGG + chr7.2:12221344-12221363 None:intergenic 40.0%
ACAAACACTTGGAGACAGAT+TGG + chr7.2:12222623-12222642 None:intergenic 40.0%
ACAGCTATGGGATCAATCTA+CGG - chr7.2:12224330-12224349 MS.gene061887:intron 40.0%
ACGACGTATCTCTTTCGTTA+GGG + chr7.2:12224698-12224717 None:intergenic 40.0%
ACGTCATATCATTGAAGTGG+GGG + chr7.2:12223104-12223123 None:intergenic 40.0%
AGTAGAATGTATGGGGAATC+TGG - chr7.2:12224444-12224463 MS.gene061887:intron 40.0%
ATACAGTTGCCGAAGTTATC+GGG + chr7.2:12221103-12221122 None:intergenic 40.0%
ATATGCTGGGATCTCTATCA+AGG - chr7.2:12224853-12224872 MS.gene061887:intron 40.0%
ATGGACATTGCTCTATCAAG+TGG - chr7.2:12223796-12223815 MS.gene061887:intron 40.0%
ATGTAAGCAAACCGAGGATA+GGG + chr7.2:12221343-12221362 None:intergenic 40.0%
CAAAACTCCAGGAATCGATT+GGG - chr7.2:12222245-12222264 MS.gene061887:CDS 40.0%
CAACATCTAGAGGAAATTGC+TGG - chr7.2:12225188-12225207 MS.gene061887:CDS 40.0%
CAATTTCCTCTAGATGTTGG+AGG + chr7.2:12225187-12225206 None:intergenic 40.0%
CACGTCATATCATTGAAGTG+GGG + chr7.2:12223105-12223124 None:intergenic 40.0%
CAGCAATTTCCTCTAGATGT+TGG + chr7.2:12225190-12225209 None:intergenic 40.0%
CAGGCAAAGTAGAATGTATG+GGG - chr7.2:12224437-12224456 MS.gene061887:intron 40.0%
CATACAGTTGCCGAAGTTAT+CGG + chr7.2:12221104-12221123 None:intergenic 40.0%
CCACGTCATATCATTGAAGT+GGG + chr7.2:12223106-12223125 None:intergenic 40.0%
CCAGTGTAGTTGTGATACTA+TGG + chr7.2:12223553-12223572 None:intergenic 40.0%
CCATAGTATCACAACTACAC+TGG - chr7.2:12223550-12223569 MS.gene061887:intron 40.0%
CTAGCAACTCCAAATTGAGT+CGG + chr7.2:12224528-12224547 None:intergenic 40.0%
CTCAGGCAAAGTAGAATGTA+TGG - chr7.2:12224435-12224454 MS.gene061887:intron 40.0%
CTGTAGCAGGTAGTATGAAA+TGG + chr7.2:12224831-12224850 None:intergenic 40.0%
GCTCATAGTTACCAACATGT+AGG + chr7.2:12221985-12222004 None:intergenic 40.0%
GGAAATACCAATAAGAGGGA+TGG - chr7.2:12223777-12223796 MS.gene061887:intron 40.0%
GGATGGATATTCAAGGTCAA+GGG - chr7.2:12224952-12224971 MS.gene061887:CDS 40.0%
GGCAATTTCGACAGTTATAG+GGG - chr7.2:12224467-12224486 MS.gene061887:intron 40.0%
GGGCAATTTCGACAGTTATA+GGG - chr7.2:12224466-12224485 MS.gene061887:intron 40.0%
GTAGAATGTATGGGGAATCT+GGG - chr7.2:12224445-12224464 MS.gene061887:intron 40.0%
GTCACTATGCATTTGTCACT+TGG - chr7.2:12222339-12222358 MS.gene061887:CDS 40.0%
GTTACGCAGACATATGAGTT+TGG + chr7.2:12222563-12222582 None:intergenic 40.0%
GTTATACATGGTGCACAAGA+AGG - chr7.2:12221235-12221254 MS.gene061887:CDS 40.0%
GTTATACGACCCGATAACTT+CGG - chr7.2:12221091-12221110 MS.gene061887:CDS 40.0%
GTTATTGATGAGGAGCTAAG+AGG - chr7.2:12223838-12223857 MS.gene061887:intron 40.0%
TAGAATGTATGGGGAATCTG+GGG - chr7.2:12224446-12224465 MS.gene061887:intron 40.0%
TAGCAACTCCAAATTGAGTC+GGG + chr7.2:12224527-12224546 None:intergenic 40.0%
TAGGGATAATGCATATTGGG+CGG - chr7.2:12224233-12224252 MS.gene061887:intron 40.0%
TATAGTACCCCGACTCAATT+TGG - chr7.2:12224516-12224535 MS.gene061887:intron 40.0%
TCCACGTCATATCATTGAAG+TGG + chr7.2:12223107-12223126 None:intergenic 40.0%
TCCTCATCAATAACACCAAC+AGG + chr7.2:12223832-12223851 None:intergenic 40.0%
TGAGTTGTGGTTGCATCAAA+AGG + chr7.2:12223928-12223947 None:intergenic 40.0%
TGCCCCAATATTGAAAAGCT+TGG - chr7.2:12225007-12225026 MS.gene061887:CDS 40.0%
TGGATGGATATTCAAGGTCA+AGG - chr7.2:12224951-12224970 MS.gene061887:CDS 40.0%
TGTGATACTATGGAGAAGCT+TGG + chr7.2:12223543-12223562 None:intergenic 40.0%
TTGTTGAAGTGGATACATGG+AGG - chr7.2:12221444-12221463 MS.gene061887:CDS 40.0%
! ATGCAAAGATCAAGCTTTGG+TGG + chr7.2:12224161-12224180 None:intergenic 40.0%
! GCTTTTTGTGGCATACTCAA+TGG - chr7.2:12224890-12224909 MS.gene061887:CDS 40.0%
! GGTTCTTAGCTCTTATACCA+TGG - chr7.2:12224394-12224413 MS.gene061887:intron 40.0%
! TGGGAGATTTTTGTAGGCTA+TGG + chr7.2:12223986-12224005 None:intergenic 40.0%
!! GTCAACAAGTGTGTCGATTT+GGG + chr7.2:12221169-12221188 None:intergenic 40.0%
!! TCCTGTTGGTGTTATTGATG+AGG - chr7.2:12223828-12223847 MS.gene061887:intron 40.0%
!! TGAAGTTTGTTTGACTTGCG+GGG + chr7.2:12225358-12225377 None:intergenic 40.0%
!!! CATTGTCTTGTTTTCAGGCA+AGG - chr7.2:12223387-12223406 MS.gene061887:intron 40.0%
!!! GGTAGATCTCTTGCTTTTTG+TGG - chr7.2:12224878-12224897 MS.gene061887:CDS 40.0%
!!! TCTGAGCTTTTTTCTGCACA+TGG + chr7.2:12224074-12224093 None:intergenic 40.0%
AAACGACTCTGCCTACATGT+TGG - chr7.2:12221971-12221990 MS.gene061887:CDS 45.0%
ACCAACTATGCTGCATGCTA+AGG + chr7.2:12220891-12220910 None:intergenic 45.0%
ACCTCAATGTAAGCAAACCG+AGG + chr7.2:12221349-12221368 None:intergenic 45.0%
ACCTGCTACAGCAATATGCT+GGG - chr7.2:12224840-12224859 MS.gene061887:intron 45.0%
ACCTTAGCATGCAGCATAGT+TGG - chr7.2:12220887-12220906 MS.gene061887:CDS 45.0%
AGAATGGCAGAGGCTACAAT+AGG - chr7.2:12224546-12224565 MS.gene061887:intron 45.0%
AGCAACTCCAAATTGAGTCG+GGG + chr7.2:12224526-12224545 None:intergenic 45.0%
AGGGATAATGCATATTGGGC+GGG - chr7.2:12224234-12224253 MS.gene061887:intron 45.0%
CAGCTATGGGATCAATCTAC+GGG - chr7.2:12224331-12224350 MS.gene061887:intron 45.0%
CCAAAACTCCAGGAATCGAT+TGG - chr7.2:12222244-12222263 MS.gene061887:CDS 45.0%
CCCACTTCAATGATATGACG+TGG - chr7.2:12223103-12223122 MS.gene061887:intron 45.0%
CGACGTATCTCTTTCGTTAG+GGG + chr7.2:12224697-12224716 None:intergenic 45.0%
CGATAACTTCGGCAACTGTA+TGG - chr7.2:12221102-12221121 MS.gene061887:CDS 45.0%
CGTCATATCATTGAAGTGGG+GGG + chr7.2:12223103-12223122 None:intergenic 45.0%
CTCTTTCCTCCAACATCTAG+AGG - chr7.2:12225178-12225197 MS.gene061887:CDS 45.0%
CTTCCTACCAAGGATCAACA+AGG + chr7.2:12224493-12224512 None:intergenic 45.0%
GACGACGTATCTCTTTCGTT+AGG + chr7.2:12224699-12224718 None:intergenic 45.0%
GCAATGTCCATCCCTCTTAT+TGG + chr7.2:12223787-12223806 None:intergenic 45.0%
GCAGACATATGAGTTTGGAC+TGG + chr7.2:12222558-12222577 None:intergenic 45.0%
GCGTTTGCAACTGAGAATGT+TGG + chr7.2:12224297-12224316 None:intergenic 45.0%
GGCTACGCATTCAATTCATG+TGG - chr7.2:12221261-12221280 MS.gene061887:CDS 45.0%
GGGGCAATTTCGACAGTTAT+AGG - chr7.2:12224465-12224484 MS.gene061887:intron 45.0%
GTGTTGTCTGATGGAACACT+TGG - chr7.2:12220992-12221011 MS.gene061887:CDS 45.0%
TACCTGCTACAGCAATATGC+TGG - chr7.2:12224839-12224858 MS.gene061887:intron 45.0%
TCAGACAACTCAACTGCTGT+TGG - chr7.2:12223479-12223498 MS.gene061887:intron 45.0%
TCTTTCGTTAGGGGTAGTCA+TGG + chr7.2:12224688-12224707 None:intergenic 45.0%
TGGAGCTATAGCTTCTGTTC+TGG - chr7.2:12221300-12221319 MS.gene061887:CDS 45.0%
TGGGTCAATGCAACAAGAGT+TGG + chr7.2:12223737-12223756 None:intergenic 45.0%
! AAAGATCAAGCTTTGGTGGC+TGG + chr7.2:12224157-12224176 None:intergenic 45.0%
! AACAGCAGTTGAGTTGTCTG+AGG + chr7.2:12223480-12223499 None:intergenic 45.0%
! AAGATCAAGCTTTGGTGGCT+GGG + chr7.2:12224156-12224175 None:intergenic 45.0%
! AGTGGCATGTCTTTTCCTGT+TGG - chr7.2:12223814-12223833 MS.gene061887:intron 45.0%
! CGACACACTTGTTGACGAAA+AGG - chr7.2:12221173-12221192 MS.gene061887:CDS 45.0%
! GAGTTGTTTCGAACTCGTCT+TGG - chr7.2:12220848-12220867 MS.gene061887:CDS 45.0%
! GCAATCTTGGAGTGTTCTGA+AGG + chr7.2:12224652-12224671 None:intergenic 45.0%
! TCCTCGGTTTGCTTACATTG+AGG - chr7.2:12221345-12221364 MS.gene061887:CDS 45.0%
!! CCAATCGATTCCTGGAGTTT+TGG + chr7.2:12222247-12222266 None:intergenic 45.0%
!! CGTCAACAAGTGTGTCGATT+TGG + chr7.2:12221170-12221189 None:intergenic 45.0%
!! GAGCTTGTTGGAGCTACATT+GGG + chr7.2:12224109-12224128 None:intergenic 45.0%
!! TGAGCTTGTTGGAGCTACAT+TGG + chr7.2:12224110-12224129 None:intergenic 45.0%
!!! TTTTTTTTTTATAAAAAAAC+AGG - chr7.2:12223675-12223694 MS.gene061887:intron 5.0%
ACATGGTGCACAAGAAGGAG+TGG - chr7.2:12221240-12221259 MS.gene061887:CDS 50.0%
ACGAGGAACAGGAACAGCTA+TGG - chr7.2:12224317-12224336 MS.gene061887:intron 50.0%
AGCTATAGCTCCAAGTGCAG+TGG + chr7.2:12221293-12221312 None:intergenic 50.0%
CGAGGAACAGGAACAGCTAT+GGG - chr7.2:12224318-12224337 MS.gene061887:intron 50.0%
CTAGAGTTGCAGCTCTTGAG+GGG + chr7.2:12224608-12224627 None:intergenic 50.0%
GCTAGAGTTGCAGCTCTTGA+GGG + chr7.2:12224609-12224628 None:intergenic 50.0%
GCTGGGATCTCTATCAAGGA+CGG - chr7.2:12224857-12224876 MS.gene061887:intron 50.0%
GGCAAAGCCTAATGACAGAG+AGG + chr7.2:12224190-12224209 None:intergenic 50.0%
TCCCAGCATATTGCTGTAGC+AGG + chr7.2:12224844-12224863 None:intergenic 50.0%
TCTTGTGACTCGAGATCGTG+AGG + chr7.2:12225095-12225114 None:intergenic 50.0%
TGCTAGAGTTGCAGCTCTTG+AGG + chr7.2:12224610-12224629 None:intergenic 50.0%
TGGAGTTGCTAGAATGGCAG+AGG - chr7.2:12224536-12224555 MS.gene061887:intron 50.0%
TTAGGCTTTGCCGTGTTCCT+TGG - chr7.2:12224198-12224217 MS.gene061887:intron 50.0%
TTCTCAGTTGCAAACGCACG+AGG - chr7.2:12224300-12224319 MS.gene061887:intron 50.0%
! TGAGTTGTCTGAGGCTGAGA+TGG + chr7.2:12223471-12223490 None:intergenic 50.0%
! TTGGATCCCCAATCGATTCC+TGG + chr7.2:12222255-12222274 None:intergenic 50.0%
!! ATAGGGGCCTTGTTGATCCT+TGG - chr7.2:12224483-12224502 MS.gene061887:intron 50.0%
!! TCCTGTTGTGGAGAGGTACT+TGG + chr7.2:12223519-12223538 None:intergenic 50.0%
AAGCAAACCGAGGATAGGGC+AGG + chr7.2:12221339-12221358 None:intergenic 55.0%
AGCAAACCGAGGATAGGGCA+GGG + chr7.2:12221338-12221357 None:intergenic 55.0%
AGTGGCTACCGGTGCATTTG+TGG - chr7.2:12221135-12221154 MS.gene061887:CDS 55.0%
CAAACGCTCGCTGAGCTTGT+TGG + chr7.2:12224121-12224140 None:intergenic 55.0%
CATTGAAGTGGGGGGTAGTG+AGG + chr7.2:12223095-12223114 None:intergenic 55.0%
GAGAAGCTTGGCTCCTGTTG+TGG + chr7.2:12223531-12223550 None:intergenic 55.0%
GCCAAGTACCTCTCCACAAC+AGG - chr7.2:12223515-12223534 MS.gene061887:intron 55.0%
GTGACGCCGTTAGAGGTTGT+TGG - chr7.2:12221014-12221033 MS.gene061887:CDS 55.0%
GTTGCAAACGCACGAGGAAC+AGG - chr7.2:12224306-12224325 MS.gene061887:intron 55.0%
!! ACACTTGGTGACGCCGTTAG+AGG - chr7.2:12221007-12221026 MS.gene061887:CDS 55.0%
!! GGGCCTTGTTGATCCTTGGT+AGG - chr7.2:12224487-12224506 MS.gene061887:intron 55.0%
!! GTGGCTTGTTCCACTGCACT+TGG - chr7.2:12221280-12221299 MS.gene061887:CDS 55.0%
ATAGGGCAGGGGCAGCAACA+TGG + chr7.2:12221326-12221345 None:intergenic 60.0%
CAGCGCCACCACAAATGCAC+CGG + chr7.2:12221146-12221165 None:intergenic 60.0%
GCAAACCGAGGATAGGGCAG+GGG + chr7.2:12221337-12221356 None:intergenic 60.0%
GCTTGGCTCCTGTTGTGGAG+AGG + chr7.2:12223526-12223545 None:intergenic 60.0%
GGCTACCGGTGCATTTGTGG+TGG - chr7.2:12221138-12221157 MS.gene061887:CDS 60.0%
CGGCAACTGTATGGCTGCGC+TGG - chr7.2:12221111-12221130 MS.gene061887:CDS 65.0%
TGCTGCCCCTGCCCTATCCT+CGG - chr7.2:12221329-12221348 MS.gene061887:CDS 65.0%
! CTGTATGGCTGCGCTGGCAG+TGG - chr7.2:12221117-12221136 MS.gene061887:CDS 65.0%
! GCTGCGCTGGCAGTGGCTAC+CGG - chr7.2:12221124-12221143 MS.gene061887:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 12220812 12225415 12220812 ID=MS.gene061887
chr7.2 mRNA 12220812 12225415 12220812 ID=MS.gene061887.t1;Parent=MS.gene061887
chr7.2 exon 12224861 12225415 12224861 ID=MS.gene061887.t1.exon1;Parent=MS.gene061887.t1
chr7.2 CDS 12224861 12225415 12224861 ID=cds.MS.gene061887.t1;Parent=MS.gene061887.t1
chr7.2 exon 12222656 12222823 12222656 ID=MS.gene061887.t1.exon2;Parent=MS.gene061887.t1
chr7.2 CDS 12222656 12222823 12222656 ID=cds.MS.gene061887.t1;Parent=MS.gene061887.t1
chr7.2 exon 12220812 12222530 12220812 ID=MS.gene061887.t1.exon3;Parent=MS.gene061887.t1
chr7.2 CDS 12220812 12222530 12220812 ID=cds.MS.gene061887.t1;Parent=MS.gene061887.t1
Gene Sequence

>MS.gene061887

ATGTCAGGAACAACAACAATTGCAAAAACAAGGACAGAGTTGTTTCGAACTCGTCTTGGTTCTGCTTTAAGAACAACCTTAGCATGCAGCATAGTTGGTTGCACTGCCCTATATAGCCCTCAACCTATAAAGGGTTACATTAAATTTCCATCTATTTCCTATGTCACAACAATTCTCATAGTGTTGTCTGATGGAACACTTGGTGACGCCGTTAGAGGTTGTTGGCATGTTTTATTGGCAACCATTCAGGTTATGATTTTTTCTCTACTTAGCTTGCAAGTTATACGACCCGATAACTTCGGCAACTGTATGGCTGCGCTGGCAGTGGCTACCGGTGCATTTGTGGTGGCGCTGCCCAAATCGACACACTTGTTGACGAAAAGGATTGCATATGGACAGCTTGTGATAGTATATGTCAGCACAGTTATACATGGTGCACAAGAAGGAGTGGCTACGCATTCAATTCATGTGGCTTGTTCCACTGCACTTGGAGCTATAGCTTCTGTTCTGGCCATGTTGCTGCCCCTGCCCTATCCTCGGTTTGCTTACATTGAGGTAACTTAAACTTTTTTTTAATATTAGAATCATGCTAGATATATGTATTGAATTTAGAACATGTTTTTTTTTTTTTTTTGTTGAAGTGGATACATGGAGGATGAATAATGTAATCACAATTTAGAATAAACAGGACATTCATTTCTCTTTAGAAAAGCAGATGCAGAAGCAAATTAAGTGATCTTAGGTTATTTGTTACAACTTTTTTTCGTAAAACCTGTTCAAAAAAACTTTTTTTTTCGTAAAAAAATATTATTTTTAACAAAATAATCACTTTAATTTTTTTTCATCTGTTTGTACAAACTATTTAAAATGAGAAGCTATTTACGGTAACTTTTCCATAAGATCATTTTTATTCAATAAACAAATACAAAATAACTTATATTTTTTTTTACATTATTGAGTATCAAAACCTTTTTTTTTTTTTTGTGTTTTGAAATTGTTAGAAGTACAAATGATTTACAAAAACAATTAACACAAACAATGAATACACAAAAATTCTTGTTAAAAAAAACAATGAATACTCGATAATTGTTAACAAAGTTCAGTTAAATGTGTCTTTAACAAAACGACTCTTTTTTTTTTTTTTTTACGTGATTTAGCAAAACGACTCTGCCTACATGTTGGTAACTATGAGCCATACCCAATCGAAATAACTGATAGTCATATTTAACAATTAAATATTTTTCAAATTATTGCTATTGTTATGATCGGTATATATATAATACTGTCAACAAAATAATCTATCTATATTCTATATATAATTAATCTTTTTTATTTTGACGATATATAATTAATATTTATGACACTTTCAAAATGTGGAAATAATACCTTTAAAAAAAAGGGGGAATAATAATATATTTGGTATAATATAGTTCCAAAACTCCAGGAATCGATTGGGGATCCAATCAACATCTTTATGATTGAGAAGAGAATACATGATGAAAGTTGCAAGCTGTATTGTGTTCTGATGTCACTATGCATTTGTCACTTGGCTCAATTTAACGTACTATACACCTTCATTAATTTTTGTAAAATATAAAATTAACCAATTTAATCATTAAAATGAATGTCTGAATACATATAAATCATTAACAAAATATATAATCCAACGTTTGAATTGACATAATTTATAAAAAAAATAAAATAAAATATATTTAAAAACTTAAATCTGGAATTTGGATGGATCCAGTCCAAACTCATATGTCTGCGTAACCAATAAAGCATTTTCACAAGACAGAAGACAGTGCAAGCCAATCTGTCTCCAAGTGTTTGTGTATATTTGCATGAAGAGAAAGACATTTGGTTCATTCTCCCATCACTTAGCATAATAATTCGTAATAAGAAACAAAAAAATTAATGATCCGATTAAAAACAATCCAACTAATGTCAATTTGTTTCTCTGATCTCATCGACGCATCCTGTATAATTTGATGCAAGTAAGAAAAATCTTTGTTTTTTTGACTGGAAAGTAAGAAAAAAATCTTAACATGTTACTATCGCAACCAAATTATTATATTAGGCATTGACATTTGACAAGCAAAATTTTTCTTAATATAATTTCTGATATTTGTAAATTACCACATATAGTATTACAGAAGTTCTTTTTCAACAATATTTTAAGCAACTTTCTAAAATCATAATTTTATCATTTTTTATTTATAGATTTAATTTGAGAAAATAGGATACATCTTAAAATAATTGTATCTGTACTGTGTCAAATTACCTCACTACCCCCCACTTCAATGATATGACGTGGAAAAAATAGTTGATTCTTATTGAATGTTAGTGTTGCAACAATTATGTTTTGCGACAAAGTAGTTTTTACTTACAAAATATATCCATTAAACTCCTTTAATTTACATGCAATGTTAGTGTAAAGTTATTTTACACATGCATCCAATAATGTATTATTACGGCATTTAATTTGTTCGAACACATAAGTTGTCATATTTATTAATAGATGTGAAAACACAATGCATGTGTAACTAAAGCCAAGATATTAAAAGCACACTTTGCACATTGTCTTGTTTTCAGGCAAGGAAGTTCCACCAACTATACATTGAGAATACATCTGAGAGATTAAATTGCAATATAGAGGCCATCTCAGCCTCAGACAACTCAACTGCTGTTGGTTTTATAACTAAAGCCAAGTACCTCTCCACAACAGGAGCCAAGCTTCTCCATAGTATCACAACTACACTGGTAAGTTAAGCAAAGCTTAAATCATTGCATTCAAGTTCAACATTGAAGTAGCTTCAATATTAAATTTCCTAGCAGTTGCGAATAAACTAATAAGTTATATGTTTTTTTTTTTTATAAAAAAACAGGATGGCATGCATTGGGAGAGACCTCAAACAATAATTTCCAACTCTTGTTGCATTGACCCAGAAGAGAAACTGCAAGATTTGGAAATACCAATAAGAGGGATGGACATTGCTCTATCAAGTGGCATGTCTTTTCCTGTTGGTGTTATTGATGAGGAGCTAAGAGGTGTTCTGCTCAATTGCAGAGAACAAATCAGCCAAAAATTAGACCAGCAAGCTAAATGTTTTGTTCCTTTTGATGCAACCACAACTCAAGAAATGAAACAAGACGTTTTCAACAAAAACCCATCCATAGCCTACAAAAATCTCCCAACATCATTCTTTTTATACTGTGTGCAACTTCTCCGAGATGACTTGTCTATTTCAAAGAAAACTGACCATGTGCAGAAAAAAGCTCAGAAAAATGATGATTCCCAATGTAGCTCCAACAAGCTCAGCGAGCGTTTGATGAACTTGATTCCCAGCCACCAAAGCTTGATCTTTGCATTTAAGTCCTCTCTGTCATTAGGCTTTGCCGTGTTCCTTGGTTTGATATATGATAGGGATAATGCATATTGGGCGGGACTCACAATTGCAATTAGTTTCGTGACTGGACGACAGCCAACATTCTCAGTTGCAAACGCACGAGGAACAGGAACAGCTATGGGATCAATCTACGGGATCATATGTAGCTTCATTTTCCAAAGATTTGTGGATTTAAGGTTCTTAGCTCTTATACCATGGGTCATTTTCTCTTCTTTTCTCAGGCAAAGTAGAATGTATGGGGAATCTGGGGCAATTTCGACAGTTATAGGGGCCTTGTTGATCCTTGGTAGGAAGAACTATAGTACCCCGACTCAATTTGGAGTTGCTAGAATGGCAGAGGCTACAATAGGACTTACTTGCTTCATCATAATAGAGATTATATTAAGCCCCTCAAGAGCTGCAACTCTAGCAAAATCAGAACTTTCTCAAACCTTCAGAACACTCCAAGATTGCATTAAGCAGATTGCCATGACTACCCCTAACGAAAGAGATACGTCGTCTTCAAGTTATCAAGCACTGCGAGAAGAGCACAAGAAGCTTAAATCTCTTGTGTGTCGATTAAGAGAATTTACAGCAGAAGCTGAAATGGAGCCAAATTTCTGGTTCGTACCATTTCATACTACCTGCTACAGCAATATGCTGGGATCTCTATCAAGGACGGTAGATCTCTTGCTTTTTGTGGCATACTCAATGGAGCATGTCTCACAATTGGCACAAAAAGATGGAGTAATTTGGATGGATATTCAAGGTCAAGGGAATGAGAATGTGAAGATTTTTAAGAACAAAGTTGCCCCAATATTGAAAAGCTTGGAAGAAATAACAACGACGAAGTCTATTAAGAAACTTGAAAACGAGTTGAAGAGCAAAAATGTTCCTCACGATCTCGAGTCACAAGAATATCTCAATGCAGACACATTTAGGATATTGAACAGAGATGAAGAGGTTGACAGCATTACAAACTCTTTCCTCCAACATCTAGAGGAAATTGCTGGCAAAACTCTTACCAACAAAGATGAGGAGATGCTTAAAATTCAGATGCTTTTTCATTACAGCTGCTTCGGATTCTGCACCAGTAGCTTGATGAGAGAAATAACCAAGATTGAGAGTGAAATAAAAGAACTACTTATATGGGAGAACCCCGCAAGTCAAACAAACTTCAAAGAAATTCACTCTAAGATCAATCCTCTGCAAACATAG
Protein sequence

>MS.gene061887.t1

MSGTTTIAKTRTELFRTRLGSALRTTLACSIVGCTALYSPQPIKGYIKFPSISYVTTILIVLSDGTLGDAVRGCWHVLLATIQVMIFSLLSLQVIRPDNFGNCMAALAVATGAFVVALPKSTHLLTKRIAYGQLVIVYVSTVIHGAQEGVATHSIHVACSTALGAIASVLAMLLPLPYPRFAYIEARKFHQLYIENTSERLNCNIEAISASDNSTAVGFITKAKYLSTTGAKLLHSITTTLDGMHWERPQTIISNSCCIDPEEKLQDLEIPIRGMDIALSSGMSFPVGVIDEELRGVLLNCREQISQKLDQQAKCFVPFDATTTQEMKQDVFNKNPSIAYKNLPTSFFLYCVQLLRDDLSISKKTDHVQKKAQKNDDSQCSSNKLSERLMNLIPSHQSLIFAFKSSLSLGFAVFLGLIYDRDNAYWAGLTIAISFVTGRQPTFSVANARGTGTAMGSIYGIICSFIFQRFVDLRFLALIPWVIFSSFLRQSRMYGESGAISTVIGALLILGRKNYSTPTQFGVARMAEATIGLTCFIIIEIILSPSRAATLAKSELSQTFRTLQDCIKQIAMTTPNERDTSSSSYQALREEHKKLKSLVCRLREFTAEAEMEPNFWFVPFHTTCYSNMLGSLSRTVDLLLFVAYSMEHVSQLAQKDGVIWMDIQGQGNENVKIFKNKVAPILKSLEEITTTKSIKKLENELKSKNVPHDLESQEYLNADTFRILNRDEEVDSITNSFLQHLEEIAGKTLTNKDEEMLKIQMLFHYSCFGFCTSSLMREITKIESEIKELLIWENPASQTNFKEIHSKINPLQT