AlfalfaGEDB | MS.gene63452

M. sativa cultivar XinJiangDaYe / MS.gene63452

KEGG: K06891
GO: GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0071704 GO:1901564 GO:1901565 GO:1901575
PFAM: PF02617.20

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63452.t1	RHN52844.1	98.1	160	3	0	1	160	47	206	5.50E-82	313.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63452.t1	Q9SX29	74.2	151	33	4	14	160	11	159	1.6e-53	210.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63452.t1	I3SNM6	98.1	160	3	0	1	160	1	160	4.0e-82	313.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049171	MS.gene63452	0.858823	6.32E-63	-1.69E-46
MS.gene049217	MS.gene63452	0.814584	1.43E-51	-1.69E-46
MS.gene049222	MS.gene63452	0.874544	6.22E-68	-1.69E-46
MS.gene049232	MS.gene63452	0.850393	1.75E-60	-1.69E-46
MS.gene049285	MS.gene63452	0.8614	1.05E-63	-1.69E-46
MS.gene049320	MS.gene63452	0.839571	1.46E-57	-1.69E-46
MS.gene049369	MS.gene63452	0.822999	1.75E-53	-1.69E-46
MS.gene049396	MS.gene63452	0.850878	1.28E-60	-1.69E-46
MS.gene049609	MS.gene63452	0.85386	1.81E-61	-1.69E-46
MS.gene049633	MS.gene63452	0.898141	7.09E-77	-1.69E-46
MS.gene049865	MS.gene63452	0.817013	4.11E-52	-1.69E-46
MS.gene05010	MS.gene63452	0.849822	2.53E-60	-1.69E-46
MS.gene050170	MS.gene63452	0.895237	1.16E-75	-1.69E-46
MS.gene050216	MS.gene63452	0.830313	3.15E-55	-1.69E-46
MS.gene050323	MS.gene63452	0.902038	1.46E-78	-1.69E-46
MS.gene050333	MS.gene63452	0.813455	2.54E-51	-1.69E-46
MS.gene050444	MS.gene63452	0.83113	1.99E-55	-1.69E-46
MS.gene050496	MS.gene63452	0.893525	5.79E-75	-1.69E-46
MS.gene050499	MS.gene63452	0.804736	1.87E-49	-1.69E-46
MS.gene050502	MS.gene63452	0.840567	8.04E-58	-1.69E-46
MS.gene050504	MS.gene63452	0.853536	2.24E-61	-1.69E-46
MS.gene050518	MS.gene63452	0.820593	6.32E-53	-1.69E-46
MS.gene050520	MS.gene63452	0.827962	1.17E-54	-1.69E-46
MS.gene050538	MS.gene63452	0.809912	1.50E-50	-1.69E-46
MS.gene050553	MS.gene63452	0.818446	1.95E-52	-1.69E-46
MS.gene050577	MS.gene63452	0.807817	4.20E-50	-1.69E-46
MS.gene050593	MS.gene63452	0.848912	4.53E-60	-1.69E-46
MS.gene050612	MS.gene63452	0.855581	5.73E-62	-1.69E-46
MS.gene050675	MS.gene63452	0.869706	2.53E-66	-1.69E-46
MS.gene050697	MS.gene63452	0.844112	9.25E-59	-1.69E-46
MS.gene050699	MS.gene63452	0.8291	6.22E-55	-1.69E-46
MS.gene050747	MS.gene63452	0.855092	7.96E-62	-1.69E-46
MS.gene050772	MS.gene63452	0.868696	5.39E-66	-1.69E-46
MS.gene050809	MS.gene63452	-0.822941	1.81E-53	-1.69E-46
MS.gene05080	MS.gene63452	0.899757	1.44E-77	-1.69E-46
MS.gene05081	MS.gene63452	0.870779	1.13E-66	-1.69E-46
MS.gene050868	MS.gene63452	0.910885	1.14E-82	-1.69E-46
MS.gene050871	MS.gene63452	0.909933	3.29E-82	-1.69E-46
MS.gene050876	MS.gene63452	0.800071	1.71E-48	-1.69E-46
MS.gene050904	MS.gene63452	0.841927	3.53E-58	-1.69E-46
MS.gene050950	MS.gene63452	0.860106	2.60E-63	-1.69E-46
MS.gene050986	MS.gene63452	0.844028	9.74E-59	-1.69E-46
MS.gene051138	MS.gene63452	-0.802997	4.30E-49	-1.69E-46
MS.gene051228	MS.gene63452	0.800998	1.11E-48	-1.69E-46
MS.gene051268	MS.gene63452	0.887895	9.54E-73	-1.69E-46
MS.gene051317	MS.gene63452	0.830819	2.37E-55	-1.69E-46
MS.gene051551	MS.gene63452	0.806549	7.79E-50	-1.69E-46
MS.gene051617	MS.gene63452	0.819901	9.10E-53	-1.69E-46
MS.gene051651	MS.gene63452	-0.81859	1.81E-52	-1.69E-46
MS.gene051734	MS.gene63452	0.849653	2.82E-60	-1.69E-46
MS.gene051810	MS.gene63452	0.817409	3.35E-52	-1.69E-46
MS.gene051838	MS.gene63452	0.89123	4.80E-74	-1.69E-46
MS.gene051858	MS.gene63452	0.82605	3.36E-54	-1.69E-46
MS.gene051874	MS.gene63452	0.866559	2.61E-65	-1.69E-46
MS.gene051941	MS.gene63452	0.854402	1.26E-61	-1.69E-46
MS.gene051949	MS.gene63452	0.806783	6.95E-50	-1.69E-46
MS.gene052066	MS.gene63452	0.826297	2.93E-54	-1.69E-46
MS.gene052164	MS.gene63452	0.834967	2.21E-56	-1.69E-46
MS.gene052346	MS.gene63452	0.83202	1.20E-55	-1.69E-46
MS.gene052482	MS.gene63452	0.823544	1.31E-53	-1.69E-46
MS.gene052486	MS.gene63452	0.825689	4.09E-54	-1.69E-46
MS.gene052503	MS.gene63452	0.848195	7.15E-60	-1.69E-46
MS.gene052504	MS.gene63452	0.804069	2.58E-49	-1.69E-46
MS.gene052506	MS.gene63452	0.84473	6.31E-59	-1.69E-46
MS.gene052615	MS.gene63452	0.839925	1.18E-57	-1.69E-46
MS.gene052822	MS.gene63452	0.854657	1.06E-61	-1.69E-46
MS.gene052823	MS.gene63452	0.843108	1.72E-58	-1.69E-46
MS.gene052825	MS.gene63452	0.840928	6.47E-58	-1.69E-46
MS.gene052870	MS.gene63452	0.898186	6.79E-77	-1.69E-46
MS.gene052872	MS.gene63452	0.900215	9.16E-78	-1.69E-46
MS.gene052916	MS.gene63452	0.815405	9.40E-52	-1.69E-46
MS.gene052966	MS.gene63452	0.896987	2.18E-76	-1.69E-46
MS.gene053203	MS.gene63452	0.864796	9.40E-65	-1.69E-46
MS.gene053207	MS.gene63452	0.834523	2.85E-56	-1.69E-46
MS.gene053213	MS.gene63452	0.82814	1.06E-54	-1.69E-46
MS.gene053286	MS.gene63452	0.82904	6.43E-55	-1.69E-46
MS.gene053318	MS.gene63452	0.803947	2.73E-49	-1.69E-46
MS.gene053420	MS.gene63452	-0.812784	3.56E-51	-1.69E-46
MS.gene053436	MS.gene63452	0.823259	1.53E-53	-1.69E-46
MS.gene053449	MS.gene63452	0.839595	1.44E-57	-1.69E-46
MS.gene053479	MS.gene63452	0.894349	2.68E-75	-1.69E-46
MS.gene053480	MS.gene63452	0.847431	1.16E-59	-1.69E-46
MS.gene053574	MS.gene63452	0.873746	1.16E-67	-1.69E-46
MS.gene053626	MS.gene63452	0.830997	2.14E-55	-1.69E-46
MS.gene053632	MS.gene63452	0.818098	2.34E-52	-1.69E-46
MS.gene053633	MS.gene63452	0.838028	3.67E-57	-1.69E-46
MS.gene053824	MS.gene63452	0.91989	2.55E-87	-1.69E-46
MS.gene053912	MS.gene63452	0.824052	9.94E-54	-1.69E-46
MS.gene053916	MS.gene63452	0.85194	6.40E-61	-1.69E-46
MS.gene054003	MS.gene63452	0.822123	2.80E-53	-1.69E-46
MS.gene054054	MS.gene63452	-0.803015	4.26E-49	-1.69E-46
MS.gene054344	MS.gene63452	0.819026	1.44E-52	-1.69E-46
MS.gene054408	MS.gene63452	0.828345	9.47E-55	-1.69E-46
MS.gene054595	MS.gene63452	0.867036	1.84E-65	-1.69E-46
MS.gene054600	MS.gene63452	0.85247	4.52E-61	-1.69E-46
MS.gene054642	MS.gene63452	0.834737	2.52E-56	-1.69E-46
MS.gene054706	MS.gene63452	-0.833821	4.28E-56	-1.69E-46
MS.gene05470	MS.gene63452	0.825331	4.97E-54	-1.69E-46
MS.gene054927	MS.gene63452	0.800112	1.68E-48	-1.69E-46
MS.gene05494	MS.gene63452	0.921784	2.29E-88	-1.69E-46
MS.gene054954	MS.gene63452	0.852415	4.69E-61	-1.69E-46
MS.gene05505	MS.gene63452	0.826861	2.15E-54	-1.69E-46
MS.gene055206	MS.gene63452	0.85073	1.41E-60	-1.69E-46
MS.gene055224	MS.gene63452	0.891262	4.66E-74	-1.69E-46
MS.gene055289	MS.gene63452	0.821402	4.12E-53	-1.69E-46
MS.gene055362	MS.gene63452	0.836949	6.93E-57	-1.69E-46
MS.gene055502	MS.gene63452	0.861724	8.39E-64	-1.69E-46
MS.gene055577	MS.gene63452	0.885881	5.54E-72	-1.69E-46
MS.gene055722	MS.gene63452	0.855858	4.76E-62	-1.69E-46
MS.gene055741	MS.gene63452	0.845998	2.86E-59	-1.69E-46
MS.gene055744	MS.gene63452	0.834556	2.80E-56	-1.69E-46
MS.gene055748	MS.gene63452	0.865258	6.73E-65	-1.69E-46
MS.gene055750	MS.gene63452	0.877589	5.57E-69	-1.69E-46
MS.gene055751	MS.gene63452	0.872395	3.29E-67	-1.69E-46
MS.gene055776	MS.gene63452	0.823614	1.26E-53	-1.69E-46
MS.gene05589	MS.gene63452	0.895057	1.38E-75	-1.69E-46
MS.gene055909	MS.gene63452	0.813195	2.89E-51	-1.69E-46
MS.gene055911	MS.gene63452	0.807345	5.29E-50	-1.69E-46
MS.gene05592	MS.gene63452	0.819303	1.25E-52	-1.69E-46
MS.gene055941	MS.gene63452	0.88218	1.29E-70	-1.69E-46
MS.gene056046	MS.gene63452	0.806143	9.49E-50	-1.69E-46
MS.gene056166	MS.gene63452	0.855043	8.22E-62	-1.69E-46
MS.gene056283	MS.gene63452	0.801926	7.15E-49	-1.69E-46
MS.gene056387	MS.gene63452	0.885478	7.86E-72	-1.69E-46
MS.gene056422	MS.gene63452	0.824382	8.32E-54	-1.69E-46
MS.gene056446	MS.gene63452	0.841986	3.41E-58	-1.69E-46
MS.gene056448	MS.gene63452	0.819629	1.05E-52	-1.69E-46
MS.gene056449	MS.gene63452	0.820932	5.28E-53	-1.69E-46
MS.gene056504	MS.gene63452	0.891726	3.05E-74	-1.69E-46
MS.gene056510	MS.gene63452	0.879485	1.20E-69	-1.69E-46
MS.gene056511	MS.gene63452	0.807423	5.09E-50	-1.69E-46
MS.gene056657	MS.gene63452	0.847211	1.33E-59	-1.69E-46
MS.gene056692	MS.gene63452	0.810127	1.35E-50	-1.69E-46
MS.gene056857	MS.gene63452	-0.801112	1.05E-48	-1.69E-46
MS.gene056877	MS.gene63452	0.803958	2.72E-49	-1.69E-46
MS.gene056878	MS.gene63452	0.80268	5.00E-49	-1.69E-46
MS.gene056946	MS.gene63452	0.825528	4.46E-54	-1.69E-46
MS.gene056947	MS.gene63452	0.846681	1.86E-59	-1.69E-46
MS.gene057019	MS.gene63452	0.826536	2.57E-54	-1.69E-46
MS.gene057076	MS.gene63452	0.887991	8.77E-73	-1.69E-46
MS.gene057086	MS.gene63452	0.84558	3.72E-59	-1.69E-46
MS.gene057289	MS.gene63452	0.805556	1.26E-49	-1.69E-46
MS.gene057331	MS.gene63452	0.848139	7.41E-60	-1.69E-46
MS.gene057332	MS.gene63452	0.806566	7.73E-50	-1.69E-46
MS.gene057416	MS.gene63452	0.818293	2.11E-52	-1.69E-46
MS.gene057658	MS.gene63452	0.816336	5.83E-52	-1.69E-46
MS.gene057734	MS.gene63452	0.847088	1.44E-59	-1.69E-46
MS.gene057831	MS.gene63452	0.826602	2.48E-54	-1.69E-46
MS.gene057856	MS.gene63452	0.814119	1.81E-51	-1.69E-46
MS.gene057857	MS.gene63452	0.8406	7.89E-58	-1.69E-46
MS.gene05787	MS.gene63452	0.853578	2.18E-61	-1.69E-46
MS.gene057926	MS.gene63452	0.819604	1.06E-52	-1.69E-46
MS.gene058120	MS.gene63452	0.84569	3.47E-59	-1.69E-46
MS.gene058130	MS.gene63452	0.851649	7.73E-61	-1.69E-46
MS.gene058157	MS.gene63452	0.832019	1.20E-55	-1.69E-46
MS.gene058338	MS.gene63452	0.877452	6.22E-69	-1.69E-46
MS.gene05837	MS.gene63452	0.899771	1.42E-77	-1.69E-46
MS.gene058419	MS.gene63452	0.840002	1.13E-57	-1.69E-46
MS.gene058544	MS.gene63452	0.825045	5.80E-54	-1.69E-46
MS.gene058700	MS.gene63452	0.803114	4.07E-49	-1.69E-46
MS.gene058723	MS.gene63452	0.807566	4.75E-50	-1.69E-46
MS.gene058773	MS.gene63452	0.864972	8.27E-65	-1.69E-46
MS.gene058838	MS.gene63452	0.855107	7.88E-62	-1.69E-46
MS.gene058948	MS.gene63452	0.814194	1.74E-51	-1.69E-46
MS.gene058978	MS.gene63452	-0.811429	7.03E-51	-1.69E-46
MS.gene059022	MS.gene63452	0.85208	5.84E-61	-1.69E-46
MS.gene059023	MS.gene63452	0.900691	5.68E-78	-1.69E-46
MS.gene059129	MS.gene63452	0.813864	2.06E-51	-1.69E-46
MS.gene05913	MS.gene63452	0.860385	2.14E-63	-1.69E-46
MS.gene059305	MS.gene63452	0.877112	8.16E-69	-1.69E-46
MS.gene05934	MS.gene63452	0.8178	2.73E-52	-1.69E-46
MS.gene059367	MS.gene63452	0.837885	3.99E-57	-1.69E-46
MS.gene059368	MS.gene63452	0.808211	3.46E-50	-1.69E-46
MS.gene059667	MS.gene63452	0.850625	1.50E-60	-1.69E-46
MS.gene059674	MS.gene63452	0.804316	2.29E-49	-1.69E-46
MS.gene059677	MS.gene63452	0.836226	1.06E-56	-1.69E-46
MS.gene059680	MS.gene63452	0.823287	1.50E-53	-1.69E-46
MS.gene059699	MS.gene63452	-0.827822	1.27E-54	-1.69E-46
MS.gene059703	MS.gene63452	-0.823871	1.10E-53	-1.69E-46
MS.gene059711	MS.gene63452	0.814329	1.63E-51	-1.69E-46
MS.gene059718	MS.gene63452	0.850957	1.21E-60	-1.69E-46
MS.gene059756	MS.gene63452	0.809545	1.79E-50	-1.69E-46
MS.gene059801	MS.gene63452	0.821245	4.47E-53	-1.69E-46
MS.gene059865	MS.gene63452	0.875707	2.49E-68	-1.69E-46
MS.gene059902	MS.gene63452	0.817445	3.29E-52	-1.69E-46
MS.gene06000	MS.gene63452	0.87321	1.75E-67	-1.69E-46
MS.gene06027	MS.gene63452	0.827558	1.46E-54	-1.69E-46
MS.gene060372	MS.gene63452	0.829578	4.76E-55	-1.69E-46
MS.gene060482	MS.gene63452	0.822063	2.89E-53	-1.69E-46
MS.gene060595	MS.gene63452	-0.814609	1.41E-51	-1.69E-46
MS.gene060703	MS.gene63452	0.830373	3.05E-55	-1.69E-46
MS.gene060762	MS.gene63452	0.861364	1.08E-63	-1.69E-46
MS.gene060778	MS.gene63452	0.88339	4.67E-71	-1.69E-46
MS.gene06077	MS.gene63452	0.854673	1.05E-61	-1.69E-46
MS.gene060835	MS.gene63452	0.853578	2.18E-61	-1.69E-46
MS.gene060837	MS.gene63452	0.848837	4.75E-60	-1.69E-46
MS.gene06092	MS.gene63452	0.834669	2.62E-56	-1.69E-46
MS.gene06097	MS.gene63452	0.847593	1.05E-59	-1.69E-46
MS.gene060982	MS.gene63452	0.885415	8.30E-72	-1.69E-46
MS.gene061150	MS.gene63452	0.821163	4.67E-53	-1.69E-46
MS.gene061218	MS.gene63452	0.838817	2.30E-57	-1.69E-46
MS.gene061231	MS.gene63452	0.801701	7.95E-49	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63452.t1	MTR_6g085050	98.125	160	3	0	1	160	1	160	6.49e-117	327
MS.gene63452.t1	MTR_5g054770	69.536	151	37	4	14	160	11	156	1.21e-69	207

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene63452.t1	AT1G68660	74.172	151	33	4	14	160	11	159	1.92e-74	220
MS.gene63452.t1	AT1G68660	55.629	151	31	5	14	160	11	129	2.28e-46	147

Find 30 sgRNAs with CRISPR-Local

Find 109 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTGCAGGTGATAAATATTT+TGG	0.167312	6.3:-79259666	MS.gene63452:intron
ATGCAAGAAGCACATATTAA+TGG	0.300616	6.3:-79258004	MS.gene63452:CDS
ACTGCGTAATGAAGCTTTCA+TGG	0.335357	6.3:+79260415	None:intergenic
TTAAGTCAAATTCAGATTCT+CGG	0.388414	6.3:+79259538	None:intergenic
GTTTCAAATATGGCAAAGAT+AGG	0.389452	6.3:-79259644	MS.gene63452:CDS
GCAATATCAACTGTCATTCC+AGG	0.427583	6.3:+79258037	None:intergenic
TGCATGCAATTGAGAGGAAA+TGG	0.433575	6.3:-79257935	MS.gene63452:CDS
GAGAATCTGAATTTGACTTA+AGG	0.436402	6.3:-79259536	MS.gene63452:intron
GAGTGGATGCATTGAGTAGT+TGG	0.453547	6.3:+79260363	None:intergenic
TGGAAAAGGTGGTGGTTTGT+TGG	0.476679	6.3:-79259595	MS.gene63452:CDS
GTCAAATTCAGATTCTCGGC+CGG	0.490666	6.3:+79259542	None:intergenic
TTGTGTAGCATTACTCTGTA+TGG	0.492187	6.3:+79258112	None:intergenic
TTCCTCTCAATTGCATGCAA+TGG	0.502233	6.3:+79257939	None:intergenic
CTACTCAATGCATCCACTCC+TGG	0.512586	6.3:-79260359	MS.gene63452:intron
TTAGGTGAAATTAGAGCAAG+TGG	0.519142	6.3:+79260386	None:intergenic
ACAATGGTAGCCAGTGGAAA+AGG	0.527330	6.3:-79259609	MS.gene63452:CDS
ACTCAACAACCACCATCAGC+TGG	0.532785	6.3:+79257893	None:intergenic
TCAAATTCAGATTCTCGGCC+GGG	0.540466	6.3:+79259543	None:intergenic
AGTTCAATTGAGCCAGCTGA+TGG	0.556313	6.3:-79257905	MS.gene63452:CDS
GATGCATTGAGTAGTTGGTT+AGG	0.562303	6.3:+79260368	None:intergenic
TGAGTTATAATTACCAGGAG+TGG	0.591813	6.3:+79260346	None:intergenic
TAGGAGTATTGTAATGACAA+TGG	0.592311	6.3:-79259625	MS.gene63452:CDS
GTAGCCAGTGGAAAAGGTGG+TGG	0.601202	6.3:-79259603	MS.gene63452:CDS
GACCATTGCATGCAATTGAG+AGG	0.614338	6.3:-79257941	MS.gene63452:CDS
ATGGTAGCCAGTGGAAAAGG+TGG	0.632586	6.3:-79259606	MS.gene63452:CDS
GTGTTGATGAAAGTGATACC+TGG	0.634232	6.3:-79258055	MS.gene63452:CDS
TGTAGCATTACTCTGTATGG+TGG	0.656579	6.3:+79258115	None:intergenic
ACATATTAATGGATTAGCAG+TGG	0.658551	6.3:-79257993	MS.gene63452:CDS
TCAATTGAGCCAGCTGATGG+TGG	0.665740	6.3:-79257902	MS.gene63452:CDS
GTAATGACAATGGTAGCCAG+TGG	0.683809	6.3:-79259615	MS.gene63452:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAATGAAAAAATTATTG+TGG	+	chr6.3:79259545-79259564	None:intergenic	10.0%
!!	AATTACTAACATTTAATTAT+AGG	-	chr6.3:79259518-79259537	MS.gene63452:intron	10.0%
!!	CCTAAAATTATAATAATAAA+GGG	-	chr6.3:79258418-79258437	MS.gene63452:intron	10.0%
!!	TCCTAAAATTATAATAATAA+AGG	-	chr6.3:79258417-79258436	MS.gene63452:intron	10.0%
!!!	ACTAGTAAATTATTTTATTA+GGG	-	chr6.3:79259265-79259284	MS.gene63452:intron	10.0%
!!	ATAGATTAAATATCAAAGAT+AGG	-	chr6.3:79258484-79258503	MS.gene63452:intron	15.0%
!!	CGTTAAAAAAAATTGTATTA+AGG	-	chr6.3:79258586-79258605	MS.gene63452:intron	15.0%
!!!	AAATATTTTGGTTTCAAATA+TGG	-	chr6.3:79258654-79258673	MS.gene63452:intron	15.0%
!!!	CACTAGTAAATTATTTTATT+AGG	-	chr6.3:79259264-79259283	MS.gene63452:intron	15.0%
!!!	CCCTTTATTATTATAATTTT+AGG	+	chr6.3:79258421-79258440	None:intergenic	15.0%
!!	AAAAAATATGGTCACTAAAT+TGG	-	chr6.3:79259963-79259982	MS.gene63452:intron	20.0%
!!	AATTAATCAACAAAGCAAAA+TGG	+	chr6.3:79258064-79258083	None:intergenic	20.0%
!!	ACAAACCGATAAAAAAAATA+TGG	-	chr6.3:79259951-79259970	MS.gene63452:intron	20.0%
!!	ACAAGGAAATACAAATAAAA+GGG	+	chr6.3:79259720-79259739	None:intergenic	20.0%
!!	ATTGTTTCAGTATATAAACT+CGG	-	chr6.3:79258269-79258288	MS.gene63452:intron	20.0%
!!	CATATAAAATTTGTAATTGC+AGG	-	chr6.3:79258627-79258646	MS.gene63452:intron	20.0%
!!!	AAATTTGAAGCTGTTTTTTT+AGG	+	chr6.3:79259193-79259212	None:intergenic	20.0%
!!!	AAGTTAAGAAAATCATTTTG+TGG	-	chr6.3:79259659-79259678	MS.gene63452:CDS	20.0%
!!!	AATATTTTCTTCAATTGAGT+TGG	+	chr6.3:79258344-79258363	None:intergenic	20.0%
!!!	AGTGACCATATTTTTTTTAT+CGG	+	chr6.3:79259959-79259978	None:intergenic	20.0%
!!!	CAAAATTTTGATGTGAAATA+TGG	+	chr6.3:79258941-79258960	None:intergenic	20.0%
!!!	GTTTTATTGTTTTTGTTACT+AGG	-	chr6.3:79260152-79260171	MS.gene63452:intron	20.0%
!	AATAATCATCTAGTTGTTAG+AGG	-	chr6.3:79258115-79258134	MS.gene63452:CDS	25.0%
!	ACAATAAAACATGTCATCAA+AGG	+	chr6.3:79260142-79260161	None:intergenic	25.0%
!	ACATAATTAGTTGTCAAAAG+TGG	-	chr6.3:79259578-79259597	MS.gene63452:CDS	25.0%
!	ACATTAGAAGTTGAAAGATT+AGG	-	chr6.3:79258989-79259008	MS.gene63452:intron	25.0%
!	ACGTAATCACATTAATTGAA+AGG	-	chr6.3:79259749-79259768	MS.gene63452:intron	25.0%
!	ACTGAACTTCAAATTATACA+AGG	+	chr6.3:79258148-79258167	None:intergenic	25.0%
!	AGAGATCGAAAATATCAAAT+CGG	-	chr6.3:79259845-79259864	MS.gene63452:intron	25.0%
!	ATGTGAAATATGGTATCAAT+TGG	+	chr6.3:79258931-79258950	None:intergenic	25.0%
!	ATTGATGAAATTGTGTAAGA+AGG	-	chr6.3:79258361-79258380	MS.gene63452:intron	25.0%
!	CATTAGAAGTTGAAAGATTA+GGG	-	chr6.3:79258990-79259009	MS.gene63452:intron	25.0%
!	CATTGTTTATGTAGTTACAT+AGG	+	chr6.3:79259800-79259819	None:intergenic	25.0%
!	CTGAACTTCAAATTATACAA+GGG	+	chr6.3:79258147-79258166	None:intergenic	25.0%
!	GACAAGGAAATACAAATAAA+AGG	+	chr6.3:79259721-79259740	None:intergenic	25.0%
!	TAATGTTATCGTTAGAGTAA+TGG	+	chr6.3:79258975-79258994	None:intergenic	25.0%
!	TCGTTAACATTAGAAATTAG+CGG	-	chr6.3:79259880-79259899	MS.gene63452:intron	25.0%
!	TGATTAACGAGCTTAATTTA+TGG	+	chr6.3:79258314-79258333	None:intergenic	25.0%
!	TTAAGTCAAATTCAGATTCT+CGG	+	chr6.3:79258773-79258792	None:intergenic	25.0%
!	TTGTTTCAGTATATAAACTC+GGG	-	chr6.3:79258270-79258289	MS.gene63452:intron	25.0%
!	TTTCAACATTGTTATACACA+TGG	+	chr6.3:79259478-79259497	None:intergenic	25.0%
!!	ATTGCAGGTGATAAATATTT+TGG	-	chr6.3:79258642-79258661	MS.gene63452:intron	25.0%
!!	TAACTGAAATACATTTTCAC+TGG	+	chr6.3:79258532-79258551	None:intergenic	25.0%
!!!	TAGGAGTATTATAATGACTA+TGG	-	chr6.3:79258503-79258522	MS.gene63452:intron	25.0%
	AAAACAAGCAATAAAGAGTG+TGG	+	chr6.3:79257989-79258008	None:intergenic	30.0%
	AGTACACCTCAAATTGTAAA+AGG	+	chr6.3:79259237-79259256	None:intergenic	30.0%
	CACAAGCATTAATATCTTGT+CGG	+	chr6.3:79260040-79260059	None:intergenic	30.0%
	GGTCTAACTAAAATTTGACT+CGG	-	chr6.3:79259066-79259085	MS.gene63452:intron	30.0%
	GTTCAATGGGAAGAATATAA+TGG	+	chr6.3:79259327-79259346	None:intergenic	30.0%
	GTTTCAAATATGGCAAAGAT+AGG	-	chr6.3:79258664-79258683	MS.gene63452:intron	30.0%
	TCAGTCGAGTTAATTAAAGT+CGG	-	chr6.3:79258163-79258182	MS.gene63452:intron	30.0%
	TTTAACGACATTTCCTAAGT+CGG	-	chr6.3:79259903-79259922	MS.gene63452:intron	30.0%
!	ACAATTTGAGGTGTACTTAA+GGG	-	chr6.3:79259240-79259259	MS.gene63452:intron	30.0%
!	ACTTCACATGTTTAGTTCAA+TGG	+	chr6.3:79259341-79259360	None:intergenic	30.0%
!	ATGCAAGAAGCACATATTAA+TGG	-	chr6.3:79260304-79260323	MS.gene63452:intron	30.0%
!	CTTCACATGTTTAGTTCAAT+GGG	+	chr6.3:79259340-79259359	None:intergenic	30.0%
!	GAGAATCTGAATTTGACTTA+AGG	-	chr6.3:79258772-79258791	MS.gene63452:intron	30.0%
!	TACAATTTGAGGTGTACTTA+AGG	-	chr6.3:79259239-79259258	MS.gene63452:intron	30.0%
!!	ACATATTAATGGATTAGCAG+TGG	-	chr6.3:79260315-79260334	MS.gene63452:intron	30.0%
!!	TAGGAGTATTGTAATGACAA+TGG	-	chr6.3:79258683-79258702	MS.gene63452:intron	30.0%
!!!	ATTTCTATTTTTCAAGCCAG+TGG	-	chr6.3:79260072-79260091	MS.gene63452:intron	30.0%
	ACACATGCAGAAAGATAGAT+AGG	+	chr6.3:79259694-79259713	None:intergenic	35.0%
	ACCATTGAAAAAACAACACC+CGG	-	chr6.3:79258747-79258766	MS.gene63452:intron	35.0%
	ATTGTTATACACATGGAGGA+TGG	+	chr6.3:79259471-79259490	None:intergenic	35.0%
	CAACATTGTTATACACATGG+AGG	+	chr6.3:79259475-79259494	None:intergenic	35.0%
	CACAACTATTATAGCAGACA+AGG	+	chr6.3:79259419-79259438	None:intergenic	35.0%
	CCAATGTAATGCTTTCATGT+TGG	+	chr6.3:79259048-79259067	None:intergenic	35.0%
	CTTGTCTGCTATAATAGTTG+TGG	-	chr6.3:79259417-79259436	MS.gene63452:intron	35.0%
	GATTACGTGATATCATGACA+AGG	+	chr6.3:79259737-79259756	None:intergenic	35.0%
	GTGGATGAGTTATAATTACC+AGG	+	chr6.3:79257970-79257989	None:intergenic	35.0%
	TGAGTTATAATTACCAGGAG+TGG	+	chr6.3:79257965-79257984	None:intergenic	35.0%
	TTAGGTGAAATTAGAGCAAG+TGG	+	chr6.3:79257925-79257944	None:intergenic	35.0%
	TTGTGTAGCATTACTCTGTA+TGG	+	chr6.3:79260199-79260218	None:intergenic	35.0%
!	CTGCATCCTTTTACAATTTG+AGG	-	chr6.3:79259228-79259247	MS.gene63452:intron	35.0%
!!	CCAACATGAAAGCATTACAT+TGG	-	chr6.3:79259045-79259064	MS.gene63452:intron	35.0%
!!	TTTGACTCGGAGAATCTTTA+AGG	-	chr6.3:79259079-79259098	MS.gene63452:intron	35.0%
!!!	AGGTTTTGAACTATGATGCA+TGG	+	chr6.3:79260122-79260141	None:intergenic	35.0%
!!!	GGTGTTGTTTTTTCAATGGT+TGG	+	chr6.3:79258747-79258766	None:intergenic	35.0%
!!!	GTTGTTTTTTCAATGGTTGG+AGG	+	chr6.3:79258744-79258763	None:intergenic	35.0%
	ACTAACTTAGAGTCCGACTT+AGG	+	chr6.3:79259919-79259938	None:intergenic	40.0%
	ATGTCCGTCTAAGAACCTAA+CGG	+	chr6.3:79259139-79259158	None:intergenic	40.0%
	GATGCATTGAGTAGTTGGTT+AGG	+	chr6.3:79257943-79257962	None:intergenic	40.0%
	GCAATATCAACTGTCATTCC+AGG	+	chr6.3:79260274-79260293	None:intergenic	40.0%
	GCTATAATAGTTGTGGTCAC+TGG	-	chr6.3:79259424-79259443	MS.gene63452:intron	40.0%
	TGCATGCAATTGAGAGGAAA+TGG	-	chr6.3:79260373-79260392	MS.gene63452:CDS	40.0%
	TGTAGCATTACTCTGTATGG+TGG	+	chr6.3:79260196-79260215	None:intergenic	40.0%
	TTCCTCTCAATTGCATGCAA+TGG	+	chr6.3:79260372-79260391	None:intergenic	40.0%
!	GTGTTGATGAAAGTGATACC+TGG	-	chr6.3:79260253-79260272	MS.gene63452:intron	40.0%
!!	CGGAGAATCTTTAAGGTCTT+GGG	-	chr6.3:79259086-79259105	MS.gene63452:intron	40.0%
!!	TCGGAGAATCTTTAAGGTCT+TGG	-	chr6.3:79259085-79259104	MS.gene63452:intron	40.0%
	ACAATGGTAGCCAGTGGAAA+AGG	-	chr6.3:79258699-79258718	MS.gene63452:intron	45.0%
	ACGAACATCATATACGCCAC+TGG	+	chr6.3:79260091-79260110	None:intergenic	45.0%
	AGTTCAATTGAGCCAGCTGA+TGG	-	chr6.3:79260403-79260422	MS.gene63452:CDS	45.0%
	ATGCCCGTTAGGTTCTTAGA+CGG	-	chr6.3:79259132-79259151	MS.gene63452:intron	45.0%
	GACCATTGCATGCAATTGAG+AGG	-	chr6.3:79260367-79260386	MS.gene63452:CDS	45.0%
	GAGTGGATGCATTGAGTAGT+TGG	+	chr6.3:79257948-79257967	None:intergenic	45.0%
	GGATAGAAAGAATGCCCGTT+AGG	-	chr6.3:79259121-79259140	MS.gene63452:intron	45.0%
	GTAATGACAATGGTAGCCAG+TGG	-	chr6.3:79258693-79258712	MS.gene63452:intron	45.0%
	GTCAAATTCAGATTCTCGGC+CGG	+	chr6.3:79258769-79258788	None:intergenic	45.0%
	TCAAATTCAGATTCTCGGCC+GGG	+	chr6.3:79258768-79258787	None:intergenic	45.0%
	TGTCCGTCTAAGAACCTAAC+GGG	+	chr6.3:79259138-79259157	None:intergenic	45.0%
!	TGGAAAAGGTGGTGGTTTGT+TGG	-	chr6.3:79258713-79258732	MS.gene63452:intron	45.0%
!!!	GCCGGGTGTTGTTTTTTCAA+TGG	+	chr6.3:79258751-79258770	None:intergenic	45.0%
	ATGGTAGCCAGTGGAAAAGG+TGG	-	chr6.3:79258702-79258721	MS.gene63452:intron	50.0%
	CTACTCAATGCATCCACTCC+TGG	-	chr6.3:79257949-79257968	MS.gene63452:CDS	50.0%
	GGTCTTGGGTCTAAGTCTTG+TGG	-	chr6.3:79259100-79259119	MS.gene63452:intron	50.0%
	TCAATTGAGCCAGCTGATGG+TGG	-	chr6.3:79260406-79260425	MS.gene63452:CDS	50.0%
!	CAAACCACCACCTTTTCCAC+TGG	+	chr6.3:79258712-79258731	None:intergenic	50.0%
	GTAGCCAGTGGAAAAGGTGG+TGG	-	chr6.3:79258705-79258724	MS.gene63452:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.3	gene	79257895	79260435	79257895	ID=MS.gene63452
chr6.3	mRNA	79257895	79260435	79257895	ID=MS.gene63452.t1;Parent=MS.gene63452
chr6.3	exon	79260360	79260435	79260360	ID=MS.gene63452.t1.exon1;Parent=MS.gene63452.t1
chr6.3	CDS	79260360	79260435	79260360	ID=cds.MS.gene63452.t1;Parent=MS.gene63452.t1
chr6.3	exon	79259537	79259681	79259537	ID=MS.gene63452.t1.exon2;Parent=MS.gene63452.t1
chr6.3	CDS	79259537	79259681	79259537	ID=cds.MS.gene63452.t1;Parent=MS.gene63452.t1
chr6.3	exon	79257895	79258156	79257895	ID=MS.gene63452.t1.exon3;Parent=MS.gene63452.t1
chr6.3	CDS	79257895	79258156	79257895	ID=cds.MS.gene63452.t1;Parent=MS.gene63452.t1

Gene Sequence

>MS.gene63452

ATGAAAGCTTCATTACGCAGTGCTACTCCACTTGCTCTAATTTCACCTAACCAACTACTCAATGCATCCACTCCTGGTAATTATAACTCATCCACACTCTTTATTGCTTGTTTTCACTTTCTTGAATTCAAACATATTATTTTACTTATGATTATCATTTTTAAAACCATTTTGCTTTGTTGATTAATTTCACAAACATTACAAGTTTTATATTTTCTTTAATAATCATCTAGTTGTTAGAGGAAAAGTCCCTTGTATAATTTGAAGTTCAGTCGAGTTAATTAAAGTCGGACTTTAATAATCATCTAGTTGTTAGAGGAAAAGTCCCTTGTATAATTTGAAGTTCAGTCGAGTTAATTAAAGTCGGACTAAAGATTGTTTCAGTATATAAACTCGGGTTATTTCAAACACTTTGACCATAAATTAAGCTCGTTAATCAATTGAGTCCAACTCAATTGAAGAAAATATTGATGAAATTGTGTAAGAAGGATATAACTAGTTGTTTTATATTTATGATATTTTTCCTAAAATTATAATAATAAAGGGATATAGAATGTATACTCGTTAAGATATTTGAGCTCTAATTTTAATAGATTAAATATCAAAGATAGGAGTATTATAATGACTATGGTAGCCAGTGAAAATGTATTTCAGTTAAGACATTTCAGCTCTAATTTTAATAGACATTTCTCGTTAAAAAAAATTGTATTAAGGTTCAAATGTTAATTGATACATATAAAATTTGTAATTGCAGGTGATAAATATTTTGGTTTCAAATATGGCAAAGATAGGAGTATTGTAATGACAATGGTAGCCAGTGGAAAAGGTGGTGGTTTGTTGGACAAGCCTCCAACCATTGAAAAAACAACACCCGGCCGAGAATCTGAATTTGACTTAAGGTAATACGAAAAAAGTTATCTTATTTGAACATCAAAATACAGAATGTGTGATACTGTATATATTTATCTTTATTTTTTTTTTCTTACTTTTTATCTTATGTAACTTACACTCATATCAAAAGTATGCATAAATACCAATTGATACCATATTTCACATCAAAATTTTGATGTCAAAGTACCATTACTCTAACGATAACATTAGAAGTTGAAAGATTAGGGTAGTAAACATTACTTTAAATCGTCTCAAATTACCAACATGAAAGCATTACATTGGTCTAACTAAAATTTGACTCGGAGAATCTTTAAGGTCTTGGGTCTAAGTCTTGTGGATAGAAAGAATGCCCGTTAGGTTCTTAGACGGACATTAATCATCGACAAGCTAATAGATACTTCACACCTAAAAAAACAGCTTCAAATTTTAAATTCAAATGTTGCTGCATCCTTTTACAATTTGAGGTGTACTTAAGGGACACTAGTAAATTATTTTATTAGGGACTTATATTGATAACATGAGCTATATAGTTCACATTCCATTATATTCTTCCCATTGAACTAAACATGTGAAGTTATTAGAACTGATTAAAGTAGATTGAAAAACATGTTGATCTTTATATTCAAGTTTCCTTGTCTGCTATAATAGTTGTGGTCACTGGTCATTTCAATTGCTAATGATTCCATCCTCCATGTGTATAACAATGTTGAAAATCAGTCTTTGTGCTTTCACAATTACTAACATTTAATTATAGGTCCACAATAATTTTTTCATTTTTTTAGATAACTAAAGACATAATTAGTTGTCAAAAGTGGATATATGAATGAATGATTTCTTTTACTTCATGTGTCTTTGAAAAGAAGTGTAACTATGAAGTTAAGAAAATCATTTTGTGGAAGCTCATTCCTATCTATCTTTCTGCATGTGTAGTCCCTTTTATTTGTATTTCCTTGTCATGATATCACGTAATCACATTAATTGAAAGGCAAAATGAGTAGTCAAAACTGAAAACCTATGTAACTACATAAACAATGTCATGTCATATATAGCGAGCGATTTAGAGATCGAAAATATCAAATCGGTCGTTAAATCGATCGTTAACATTAGAAATTAGCGGTTTAACGACATTTCCTAAGTCGGACTCTAAGTTAGTCAAAAATCATTTACAAACCGATAAAAAAAATATGGTCACTAAATTGGTCGACTAATAGCGATTTTTTAGTACTTCAGATTGAAGACATGTTTCAGTGTCCGACAAGATATTAATGCTTGTGATTATATACATCATTTCTATTTTTCAAGCCAGTGGCGTATATGATGTTCGTGTCTGTATCCATGCATCATAGTTCAAAACCTTTGATGACATGTTTTATTGTTTTTGTTACTAGGAAATCAAAAAAGACATCTCCACCATACAGAGTAATGCTACACAATGACAACTATAACAAAAGAGAATATGTTGTGCAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATATTGCAGTTAACGTCATGCAAGAAGCACATATTAATGGATTAGCAGTGGTCATTATTTGTGCTCAAGTTGATGCTGAAGACCATTGCATGCAATTGAGAGGAAATGGTCTTTTAAGTTCAATTGAGCCAGCTGATGGTGGTTGTTGA

Protein sequence

>MS.gene63452.t1

MKASLRSATPLALISPNQLLNASTPGDKYFGFKYGKDRSIVMTMVASGKGGGLLDKPPTIEKTTPGRESEFDLRKSKKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAHINGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC