Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33603.t1 | XP_003589598.2 | 98.7 | 531 | 7 | 0 | 1 | 531 | 1 | 531 | 0.00E+00 | 1092.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33603.t1 | Q9MBA1 | 75.0 | 532 | 126 | 2 | 3 | 527 | 4 | 535 | 5.9e-246 | 851.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33603.t1 | G7I8G8 | 98.7 | 531 | 7 | 0 | 1 | 531 | 1 | 531 | 0.0e+00 | 1092.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene33603 | 0.87119 | 8.25E-67 | -1.69E-46 |
| MS.gene049173 | MS.gene33603 | 0.806469 | 8.10E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene33603 | 0.819155 | 1.35E-52 | -1.69E-46 |
| MS.gene049222 | MS.gene33603 | 0.872789 | 2.43E-67 | -1.69E-46 |
| MS.gene049232 | MS.gene33603 | 0.905058 | 6.40E-80 | -1.69E-46 |
| MS.gene049259 | MS.gene33603 | -0.827764 | 1.31E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene33603 | 0.894292 | 2.83E-75 | -1.69E-46 |
| MS.gene049320 | MS.gene33603 | 0.912693 | 1.45E-83 | -1.69E-46 |
| MS.gene04939 | MS.gene33603 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene049600 | MS.gene33603 | 0.868448 | 6.48E-66 | -1.69E-46 |
| MS.gene049609 | MS.gene33603 | 0.826271 | 2.97E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene33603 | 0.8758 | 2.32E-68 | -1.69E-46 |
| MS.gene049657 | MS.gene33603 | 0.803729 | 3.03E-49 | -1.69E-46 |
| MS.gene04986 | MS.gene33603 | -0.831213 | 1.90E-55 | -1.69E-46 |
| MS.gene050082 | MS.gene33603 | -0.814975 | 1.17E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene33603 | 0.890932 | 6.30E-74 | -1.69E-46 |
| MS.gene050163 | MS.gene33603 | 0.870579 | 1.31E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene33603 | 0.877044 | 8.61E-69 | -1.69E-46 |
| MS.gene050170 | MS.gene33603 | 0.890552 | 8.89E-74 | -1.69E-46 |
| MS.gene050216 | MS.gene33603 | 0.858253 | 9.35E-63 | -1.69E-46 |
| MS.gene050323 | MS.gene33603 | 0.920402 | 1.34E-87 | -1.69E-46 |
| MS.gene050333 | MS.gene33603 | 0.875683 | 2.54E-68 | -1.69E-46 |
| MS.gene050338 | MS.gene33603 | -0.827396 | 1.60E-54 | -1.69E-46 |
| MS.gene050381 | MS.gene33603 | -0.821223 | 4.53E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene33603 | 0.809709 | 1.66E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene33603 | 0.914653 | 1.49E-84 | -1.69E-46 |
| MS.gene050502 | MS.gene33603 | 0.84329 | 1.53E-58 | -1.69E-46 |
| MS.gene050504 | MS.gene33603 | 0.915049 | 9.33E-85 | -1.69E-46 |
| MS.gene050518 | MS.gene33603 | 0.904091 | 1.76E-79 | -1.69E-46 |
| MS.gene050577 | MS.gene33603 | 0.896083 | 5.18E-76 | -1.69E-46 |
| MS.gene050612 | MS.gene33603 | 0.930779 | 9.96E-94 | -1.69E-46 |
| MS.gene050662 | MS.gene33603 | 0.841607 | 4.29E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene33603 | 0.89191 | 2.58E-74 | -1.69E-46 |
| MS.gene050697 | MS.gene33603 | 0.869819 | 2.33E-66 | -1.69E-46 |
| MS.gene050699 | MS.gene33603 | 0.888664 | 4.83E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene33603 | 0.832239 | 1.06E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene33603 | 0.866555 | 2.62E-65 | -1.69E-46 |
| MS.gene05080 | MS.gene33603 | 0.866812 | 2.17E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene33603 | 0.883954 | 2.90E-71 | -1.69E-46 |
| MS.gene050871 | MS.gene33603 | 0.883984 | 2.82E-71 | -1.69E-46 |
| MS.gene050876 | MS.gene33603 | 0.875646 | 2.61E-68 | -1.69E-46 |
| MS.gene050883 | MS.gene33603 | -0.829978 | 3.80E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene33603 | 0.859926 | 2.95E-63 | -1.69E-46 |
| MS.gene050950 | MS.gene33603 | 0.832691 | 8.18E-56 | -1.69E-46 |
| MS.gene05096 | MS.gene33603 | -0.801945 | 7.09E-49 | -1.69E-46 |
| MS.gene050986 | MS.gene33603 | 0.918444 | 1.55E-86 | -1.69E-46 |
| MS.gene05100 | MS.gene33603 | 0.833555 | 4.99E-56 | -1.69E-46 |
| MS.gene051044 | MS.gene33603 | -0.802528 | 5.38E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene33603 | -0.804876 | 1.75E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene33603 | -0.824767 | 6.75E-54 | -1.69E-46 |
| MS.gene051138 | MS.gene33603 | -0.816957 | 4.23E-52 | -1.69E-46 |
| MS.gene05118 | MS.gene33603 | 0.836786 | 7.63E-57 | -1.69E-46 |
| MS.gene051268 | MS.gene33603 | 0.851816 | 6.94E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene33603 | 0.880192 | 6.72E-70 | -1.69E-46 |
| MS.gene051364 | MS.gene33603 | -0.817852 | 2.66E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene33603 | -0.814658 | 1.38E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene33603 | 0.865993 | 3.95E-65 | -1.69E-46 |
| MS.gene051551 | MS.gene33603 | 0.872323 | 3.47E-67 | -1.69E-46 |
| MS.gene051651 | MS.gene33603 | -0.843902 | 1.05E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene33603 | 0.837393 | 5.34E-57 | -1.69E-46 |
| MS.gene051949 | MS.gene33603 | 0.809398 | 1.93E-50 | -1.69E-46 |
| MS.gene052066 | MS.gene33603 | 0.832155 | 1.11E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene33603 | 0.876823 | 1.03E-68 | -1.69E-46 |
| MS.gene052482 | MS.gene33603 | 0.872863 | 2.29E-67 | -1.69E-46 |
| MS.gene052486 | MS.gene33603 | 0.87823 | 3.32E-69 | -1.69E-46 |
| MS.gene052494 | MS.gene33603 | -0.809422 | 1.91E-50 | -1.69E-46 |
| MS.gene052503 | MS.gene33603 | 0.836888 | 7.18E-57 | -1.69E-46 |
| MS.gene052504 | MS.gene33603 | 0.829674 | 4.51E-55 | -1.69E-46 |
| MS.gene052506 | MS.gene33603 | 0.841758 | 3.91E-58 | -1.69E-46 |
| MS.gene052615 | MS.gene33603 | 0.823273 | 1.51E-53 | -1.69E-46 |
| MS.gene052822 | MS.gene33603 | 0.856238 | 3.68E-62 | -1.69E-46 |
| MS.gene052823 | MS.gene33603 | 0.836498 | 9.03E-57 | -1.69E-46 |
| MS.gene052825 | MS.gene33603 | 0.826103 | 3.26E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene33603 | 0.881499 | 2.28E-70 | -1.69E-46 |
| MS.gene052966 | MS.gene33603 | 0.860057 | 2.69E-63 | -1.69E-46 |
| MS.gene053203 | MS.gene33603 | 0.87181 | 5.15E-67 | -1.69E-46 |
| MS.gene053213 | MS.gene33603 | 0.866252 | 3.27E-65 | -1.69E-46 |
| MS.gene053286 | MS.gene33603 | 0.87299 | 2.08E-67 | -1.69E-46 |
| MS.gene053420 | MS.gene33603 | -0.826673 | 2.38E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene33603 | 0.838648 | 2.54E-57 | -1.69E-46 |
| MS.gene053479 | MS.gene33603 | 0.823706 | 1.20E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene33603 | 0.81438 | 1.59E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene33603 | 0.858814 | 6.36E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene33603 | 0.860952 | 1.44E-63 | -1.69E-46 |
| MS.gene053632 | MS.gene33603 | 0.81826 | 2.15E-52 | -1.69E-46 |
| MS.gene053633 | MS.gene33603 | 0.851749 | 7.24E-61 | -1.69E-46 |
| MS.gene053824 | MS.gene33603 | 0.837577 | 4.79E-57 | -1.69E-46 |
| MS.gene053916 | MS.gene33603 | 0.836666 | 8.19E-57 | -1.69E-46 |
| MS.gene054056 | MS.gene33603 | -0.81744 | 3.29E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene33603 | 0.824332 | 8.55E-54 | -1.69E-46 |
| MS.gene054595 | MS.gene33603 | 0.866516 | 2.69E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene33603 | 0.827079 | 1.91E-54 | -1.69E-46 |
| MS.gene054642 | MS.gene33603 | 0.873875 | 1.05E-67 | -1.69E-46 |
| MS.gene054706 | MS.gene33603 | -0.818825 | 1.60E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene33603 | 0.880275 | 6.28E-70 | -1.69E-46 |
| MS.gene054954 | MS.gene33603 | 0.922709 | 6.91E-89 | -1.69E-46 |
| MS.gene055154 | MS.gene33603 | -0.823206 | 1.57E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene33603 | 0.8162 | 6.25E-52 | -1.69E-46 |
| MS.gene055251 | MS.gene33603 | -0.8384 | 2.94E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene33603 | 0.899609 | 1.67E-77 | -1.69E-46 |
| MS.gene055502 | MS.gene33603 | 0.883903 | 3.03E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene33603 | 0.861544 | 9.52E-64 | -1.69E-46 |
| MS.gene055634 | MS.gene33603 | 0.815049 | 1.13E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene33603 | 0.833544 | 5.02E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene33603 | 0.907188 | 6.64E-81 | -1.69E-46 |
| MS.gene055750 | MS.gene33603 | 0.923414 | 2.74E-89 | -1.69E-46 |
| MS.gene055751 | MS.gene33603 | 0.924431 | 7.11E-90 | -1.69E-46 |
| MS.gene055776 | MS.gene33603 | 0.936957 | 7.55E-98 | -1.69E-46 |
| MS.gene055849 | MS.gene33603 | 0.857233 | 1.88E-62 | -1.69E-46 |
| MS.gene05589 | MS.gene33603 | 0.912552 | 1.71E-83 | -1.69E-46 |
| MS.gene055941 | MS.gene33603 | 0.803276 | 3.77E-49 | -1.69E-46 |
| MS.gene055942 | MS.gene33603 | -0.847567 | 1.07E-59 | -1.69E-46 |
| MS.gene056046 | MS.gene33603 | 0.861 | 1.39E-63 | -1.69E-46 |
| MS.gene056374 | MS.gene33603 | 0.829423 | 5.19E-55 | -1.69E-46 |
| MS.gene056387 | MS.gene33603 | 0.835871 | 1.30E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene33603 | 0.847557 | 1.07E-59 | -1.69E-46 |
| MS.gene056450 | MS.gene33603 | 0.808594 | 2.87E-50 | -1.69E-46 |
| MS.gene056487 | MS.gene33603 | 0.818138 | 2.29E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene33603 | 0.944094 | 3.66E-103 | -1.69E-46 |
| MS.gene056510 | MS.gene33603 | 0.914038 | 3.06E-84 | -1.69E-46 |
| MS.gene056549 | MS.gene33603 | 0.829138 | 6.09E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene33603 | 0.910416 | 1.92E-82 | -1.69E-46 |
| MS.gene056692 | MS.gene33603 | 0.854999 | 8.47E-62 | -1.69E-46 |
| MS.gene056856 | MS.gene33603 | -0.810516 | 1.11E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene33603 | 0.819612 | 1.06E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene33603 | 0.810644 | 1.04E-50 | -1.69E-46 |
| MS.gene057086 | MS.gene33603 | 0.834616 | 2.70E-56 | -1.69E-46 |
| MS.gene057416 | MS.gene33603 | 0.806437 | 8.23E-50 | -1.69E-46 |
| MS.gene05753 | MS.gene33603 | 0.85647 | 3.15E-62 | -1.69E-46 |
| MS.gene057687 | MS.gene33603 | 0.841452 | 4.71E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene33603 | 0.846902 | 1.62E-59 | -1.69E-46 |
| MS.gene057872 | MS.gene33603 | 0.852918 | 3.37E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene33603 | 0.848741 | 5.05E-60 | -1.69E-46 |
| MS.gene058099 | MS.gene33603 | -0.807164 | 5.78E-50 | -1.69E-46 |
| MS.gene058109 | MS.gene33603 | -0.812969 | 3.24E-51 | -1.69E-46 |
| MS.gene058111 | MS.gene33603 | -0.835776 | 1.38E-56 | -1.69E-46 |
| MS.gene058157 | MS.gene33603 | 0.810124 | 1.35E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene33603 | -0.831577 | 1.54E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene33603 | -0.825934 | 3.58E-54 | -1.69E-46 |
| MS.gene058175 | MS.gene33603 | -0.835342 | 1.77E-56 | -1.69E-46 |
| MS.gene058268 | MS.gene33603 | -0.82254 | 2.24E-53 | -1.69E-46 |
| MS.gene058269 | MS.gene33603 | -0.817267 | 3.60E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene33603 | -0.871499 | 6.52E-67 | -1.69E-46 |
| MS.gene058338 | MS.gene33603 | 0.820578 | 6.37E-53 | -1.69E-46 |
| MS.gene05837 | MS.gene33603 | 0.845664 | 3.53E-59 | -1.69E-46 |
| MS.gene058382 | MS.gene33603 | -0.802397 | 5.72E-49 | -1.69E-46 |
| MS.gene058419 | MS.gene33603 | 0.890366 | 1.05E-73 | -1.69E-46 |
| MS.gene058544 | MS.gene33603 | 0.843333 | 1.49E-58 | -1.69E-46 |
| MS.gene058719 | MS.gene33603 | 0.824878 | 6.36E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene33603 | 0.821277 | 4.40E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene33603 | 0.860795 | 1.61E-63 | -1.69E-46 |
| MS.gene058838 | MS.gene33603 | 0.844748 | 6.24E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene33603 | 0.909414 | 5.85E-82 | -1.69E-46 |
| MS.gene059023 | MS.gene33603 | 0.83553 | 1.59E-56 | -1.69E-46 |
| MS.gene059045 | MS.gene33603 | -0.827393 | 1.60E-54 | -1.69E-46 |
| MS.gene059079 | MS.gene33603 | 0.81915 | 1.35E-52 | -1.69E-46 |
| MS.gene05913 | MS.gene33603 | 0.856432 | 3.23E-62 | -1.69E-46 |
| MS.gene059367 | MS.gene33603 | 0.869005 | 4.28E-66 | -1.69E-46 |
| MS.gene059667 | MS.gene33603 | 0.859805 | 3.21E-63 | -1.69E-46 |
| MS.gene059677 | MS.gene33603 | 0.889441 | 2.42E-73 | -1.69E-46 |
| MS.gene059699 | MS.gene33603 | -0.815278 | 1.00E-51 | -1.69E-46 |
| MS.gene059701 | MS.gene33603 | -0.813671 | 2.27E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene33603 | -0.835856 | 1.31E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene33603 | 0.870847 | 1.07E-66 | -1.69E-46 |
| MS.gene059756 | MS.gene33603 | 0.838222 | 3.27E-57 | -1.69E-46 |
| MS.gene059801 | MS.gene33603 | 0.826136 | 3.20E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene33603 | 0.85677 | 2.57E-62 | -1.69E-46 |
| MS.gene059865 | MS.gene33603 | 0.946379 | 5.17E-105 | -1.69E-46 |
| MS.gene06000 | MS.gene33603 | 0.886082 | 4.66E-72 | -1.69E-46 |
| MS.gene060295 | MS.gene33603 | 0.816007 | 6.90E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene33603 | 0.841137 | 5.70E-58 | -1.69E-46 |
| MS.gene060526 | MS.gene33603 | 0.814666 | 1.37E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene33603 | -0.849658 | 2.81E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene33603 | 0.890667 | 8.01E-74 | -1.69E-46 |
| MS.gene060762 | MS.gene33603 | 0.891423 | 4.03E-74 | -1.69E-46 |
| MS.gene060778 | MS.gene33603 | 0.912367 | 2.11E-83 | -1.69E-46 |
| MS.gene06077 | MS.gene33603 | 0.90361 | 2.90E-79 | -1.69E-46 |
| MS.gene060823 | MS.gene33603 | -0.841744 | 3.95E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene33603 | 0.805227 | 1.48E-49 | -1.69E-46 |
| MS.gene060947 | MS.gene33603 | -0.809232 | 2.09E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene33603 | 0.838142 | 3.43E-57 | -1.69E-46 |
| MS.gene060982 | MS.gene33603 | 0.935992 | 3.53E-97 | -1.69E-46 |
| MS.gene061044 | MS.gene33603 | -0.844184 | 8.85E-59 | -1.69E-46 |
| MS.gene061134 | MS.gene33603 | 0.825258 | 5.17E-54 | -1.69E-46 |
| MS.gene061150 | MS.gene33603 | 0.841164 | 5.61E-58 | -1.69E-46 |
| MS.gene061218 | MS.gene33603 | 0.809241 | 2.09E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33603.t1 | MTR_1g030480 | 98.682 | 531 | 7 | 0 | 1 | 531 | 1 | 531 | 0.0 | 1096 |
| MS.gene33603.t1 | MTR_3g105820 | 25.926 | 351 | 211 | 15 | 210 | 531 | 99 | 429 | 4.89e-26 | 112 |
| MS.gene33603.t1 | MTR_8g085790 | 23.796 | 353 | 193 | 19 | 213 | 513 | 61 | 389 | 3.33e-14 | 75.5 |
| MS.gene33603.t1 | MTR_8g085840 | 21.448 | 359 | 211 | 14 | 213 | 521 | 85 | 422 | 8.56e-14 | 74.3 |
| MS.gene33603.t1 | MTR_8g085820 | 21.849 | 357 | 196 | 17 | 213 | 513 | 61 | 390 | 2.09e-12 | 70.1 |
| MS.gene33603.t1 | MTR_4g057200 | 25.862 | 174 | 109 | 6 | 210 | 364 | 93 | 265 | 4.98e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33603.t1 | AT1G44446 | 75.000 | 532 | 126 | 2 | 3 | 527 | 4 | 535 | 0.0 | 829 |
| MS.gene33603.t1 | AT1G44446 | 75.000 | 480 | 113 | 2 | 3 | 475 | 4 | 483 | 0.0 | 739 |
| MS.gene33603.t1 | AT1G44446 | 77.829 | 433 | 96 | 0 | 95 | 527 | 1 | 433 | 0.0 | 715 |
| MS.gene33603.t1 | AT1G44446 | 71.802 | 383 | 101 | 2 | 3 | 378 | 4 | 386 | 0.0 | 555 |
| MS.gene33603.t1 | AT2G24820 | 23.650 | 389 | 244 | 13 | 160 | 520 | 45 | 408 | 3.96e-25 | 109 |
| MS.gene33603.t1 | AT3G44880 | 26.667 | 225 | 138 | 9 | 210 | 410 | 85 | 306 | 9.23e-12 | 67.8 |
Find 135 sgRNAs with CRISPR-Local
Find 314 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTTTCTCTGCTGACTTAA+AGG | 0.172252 | 1.1:-15820023 | MS.gene33603:CDS |
| ATCCTAATTTAAAGAATTTC+TGG | 0.191900 | 1.1:-15820054 | MS.gene33603:CDS |
| AGGAACCATGGGTTATCTTT+AGG | 0.213560 | 1.1:-15819821 | MS.gene33603:CDS |
| CAGGGTTTGAAAGGTAAATT+TGG | 0.219218 | 1.1:-15821184 | MS.gene33603:CDS |
| GCTTTGTCCTTTCAATTTCC+CGG | 0.258774 | 1.1:+15818441 | None:intergenic |
| CTCCATAGATGTTCCATAAA+AGG | 0.264680 | 1.1:+15818301 | None:intergenic |
| CAGGTGTGTTGAACATTCTT+TGG | 0.268435 | 1.1:+15818417 | None:intergenic |
| TACCAGAAATTCTTTAAATT+AGG | 0.270588 | 1.1:+15820052 | None:intergenic |
| GGTTGAACACGGATTACTTT+TGG | 0.283837 | 1.1:-15819225 | MS.gene33603:CDS |
| CATCTGGTCTGCAAGGATAT+TGG | 0.286825 | 1.1:-15818534 | MS.gene33603:CDS |
| CTTTATTCATTCTCTCTTGT+TGG | 0.291005 | 1.1:+15817722 | None:intergenic |
| CCTTCTTTACTACCTCCTTC+TGG | 0.291205 | 1.1:-15819417 | MS.gene33603:CDS |
| CTTAGTGGCGCTTTAGATCT+TGG | 0.291618 | 1.1:+15821094 | None:intergenic |
| GGAACCATGGGTTATCTTTA+GGG | 0.299759 | 1.1:-15819820 | MS.gene33603:CDS |
| GTCGATTGGCACCATGAAAA+AGG | 0.314224 | 1.1:-15820427 | MS.gene33603:CDS |
| AATGTCGAAGTATGAGTAAA+AGG | 0.321362 | 1.1:+15819176 | None:intergenic |
| AAACTCTTGCTTCAGATATA+TGG | 0.329301 | 1.1:+15820263 | None:intergenic |
| ATCTGGTCTGCAAGGATATT+GGG | 0.329604 | 1.1:-15818533 | MS.gene33603:CDS |
| AGCAAGAGTTTCTACTGCTT+TGG | 0.334343 | 1.1:-15820251 | MS.gene33603:CDS |
| ACATTTAGCATTCGAGTAGA+TGG | 0.343874 | 1.1:+15819522 | None:intergenic |
| TTTACCAATTCTTCCATGTA+AGG | 0.356597 | 1.1:+15820220 | None:intergenic |
| AAAGGATCTAGCTGGGTTGC+AGG | 0.360380 | 1.1:-15820409 | MS.gene33603:CDS |
| ACAGATTGTCATGGAACTTC+CGG | 0.364114 | 1.1:-15819246 | MS.gene33603:intron |
| ACTAAGTAAAGGAAAAGTTT+TGG | 0.365161 | 1.1:-15821077 | MS.gene33603:CDS |
| TTTGGAGTGTTTGCTGTGTT+TGG | 0.368010 | 1.1:-15821166 | MS.gene33603:CDS |
| ACTCCCTTACATGGAAGAAT+TGG | 0.379042 | 1.1:-15820224 | MS.gene33603:CDS |
| AAGAAAAGCTTAAATGTATC+AGG | 0.384915 | 1.1:-15820094 | MS.gene33603:CDS |
| ATCATGCCTAGCTACTTCTA+TGG | 0.388459 | 1.1:+15821042 | None:intergenic |
| AAGAAGGGATGATCTGGATT+TGG | 0.390925 | 1.1:-15819470 | MS.gene33603:CDS |
| CCAAGCTTGTCATAGGTAAC+TGG | 0.395981 | 1.1:+15817679 | None:intergenic |
| GGATCCCTATCCGATTGATA+TGG | 0.397893 | 1.1:-15818512 | MS.gene33603:CDS |
| CTACCAAGCTTGACACCAAA+AGG | 0.400406 | 1.1:-15822193 | MS.gene33603:CDS |
| TGAATAAAGGTGCAAATGTA+TGG | 0.404916 | 1.1:-15817708 | MS.gene33603:CDS |
| GGAGTTTCGACCACCTTGTA+TGG | 0.406336 | 1.1:-15818491 | MS.gene33603:CDS |
| TTGAGAAAGAAGGGATGATC+TGG | 0.411706 | 1.1:-15819476 | MS.gene33603:CDS |
| TTGGAGGGATGCATTGGAAA+AGG | 0.412803 | 1.1:-15817641 | MS.gene33603:CDS |
| CTAAGGGATGGAGTGTTCCT+AGG | 0.413929 | 1.1:-15819151 | MS.gene33603:intron |
| CCTTACTCCAAGCTTGTCAT+AGG | 0.414297 | 1.1:+15817672 | None:intergenic |
| AAGAAAGAGATGTACCCTTT+TGG | 0.414498 | 1.1:+15822178 | None:intergenic |
| AGCAGTAGCTATGGCATTCA+TGG | 0.421129 | 1.1:+15822247 | None:intergenic |
| TTGGAGTAAGGTATAGGCTT+TGG | 0.424370 | 1.1:-15817660 | MS.gene33603:CDS |
| GTATGGTTCTATCAACCATT+GGG | 0.429913 | 1.1:-15818474 | MS.gene33603:CDS |
| TTAATTATTGTGTGTGTTGA+AGG | 0.445378 | 1.1:+15817603 | None:intergenic |
| ACAAGCTTGGAGTAAGGTAT+AGG | 0.446291 | 1.1:-15817666 | MS.gene33603:CDS |
| AAAAGTAATCCGTGTTCAAC+CGG | 0.447132 | 1.1:+15819227 | None:intergenic |
| AAGTCAGCAGAGAAAGCAAC+AGG | 0.447177 | 1.1:+15820028 | None:intergenic |
| CTTTGTCCTTTCAATTTCCC+GGG | 0.450716 | 1.1:+15818442 | None:intergenic |
| TTAGGATGGTATGACTGAAC+TGG | 0.452128 | 1.1:+15820070 | None:intergenic |
| GGGTGCGATATTTGATGTAC+AGG | 0.456724 | 1.1:-15821119 | MS.gene33603:CDS |
| AGGGGTAAAGATGGCAAACC+TGG | 0.457895 | 1.1:-15819801 | MS.gene33603:CDS |
| CCAGAAGGAGGTAGTAAAGA+AGG | 0.468373 | 1.1:+15819417 | None:intergenic |
| TAAAAGGCATATGCTTAAGA+AGG | 0.468665 | 1.1:+15818317 | None:intergenic |
| CAACAAGAGAGAATGAATAA+AGG | 0.472000 | 1.1:-15817721 | MS.gene33603:CDS |
| ATGTCGAAGTATGAGTAAAA+GGG | 0.472157 | 1.1:+15819177 | None:intergenic |
| ATGATATTGAGTACTTAGAT+TGG | 0.472398 | 1.1:-15821024 | MS.gene33603:CDS |
| TGTATGGTTCTATCAACCAT+TGG | 0.476351 | 1.1:-15818475 | MS.gene33603:CDS |
| CATCATGCTCCTCCATGAAA+AGG | 0.476387 | 1.1:-15820978 | MS.gene33603:intron |
| TAAAGCAGAAGCAGTAGCTA+TGG | 0.478061 | 1.1:+15822238 | None:intergenic |
| TCATCTTGGCTCTGTAAATG+AGG | 0.484207 | 1.1:-15819739 | MS.gene33603:CDS |
| ATCCCTTCTTTCTCAAAACA+TGG | 0.488856 | 1.1:+15819483 | None:intergenic |
| GGTTCCTCAAAACATTCCAT+TGG | 0.490124 | 1.1:+15819837 | None:intergenic |
| TAGGCTTTGGAGGGATGCAT+TGG | 0.491835 | 1.1:-15817647 | MS.gene33603:CDS |
| GAGTAAGGTATAGGCTTTGG+AGG | 0.496119 | 1.1:-15817657 | MS.gene33603:CDS |
| GTTATCTTTAGGGGTAAAGA+TGG | 0.497489 | 1.1:-15819810 | MS.gene33603:CDS |
| GTTCCTCAAAACATTCCATT+GGG | 0.498608 | 1.1:+15819838 | None:intergenic |
| AGAGCATGTCCCCTTCATCT+TGG | 0.499561 | 1.1:-15819753 | MS.gene33603:CDS |
| ACCATTGGGATTTCGAAGCC+CGG | 0.501562 | 1.1:-15818460 | MS.gene33603:CDS |
| TTGGTAGTTCTACAAAAGAT+AGG | 0.505213 | 1.1:+15822209 | None:intergenic |
| TGGAGGGATGCATTGGAAAA+GGG | 0.507380 | 1.1:-15817640 | MS.gene33603:CDS |
| TTTGGATAAACTCCCTTACA+TGG | 0.509998 | 1.1:-15820233 | MS.gene33603:CDS |
| AGAAATTCTTTAAATTAGGA+TGG | 0.513147 | 1.1:+15820056 | None:intergenic |
| ACAGATTTATCAGAAGTACT+TGG | 0.516953 | 1.1:+15820142 | None:intergenic |
| AAACTCCATATCAATCGGAT+AGG | 0.523237 | 1.1:+15818507 | None:intergenic |
| TCATACTTCGACATTTGCTA+AGG | 0.523457 | 1.1:-15819168 | MS.gene33603:CDS |
| AGCAGACATGTAGTTGGTGC+AGG | 0.524754 | 1.1:+15818398 | None:intergenic |
| CGATGAATACTAACCGTGGT+AGG | 0.526765 | 1.1:+15819701 | None:intergenic |
| ATTGCTATATAGAATGTCAC+TGG | 0.528652 | 1.1:-15818350 | MS.gene33603:CDS |
| GGTCGAAACTCCATATCAAT+CGG | 0.530169 | 1.1:+15818502 | None:intergenic |
| AAGAAGGAAGTGATGCTGCT+GGG | 0.530413 | 1.1:+15819433 | None:intergenic |
| TTTCACAAAACAGATTGTCA+TGG | 0.531019 | 1.1:-15819255 | MS.gene33603:intron |
| TCTAAAGCGCCACTAAGTAA+AGG | 0.531979 | 1.1:-15821088 | MS.gene33603:CDS |
| CATTTACAGAGCCAAGATGA+AGG | 0.535455 | 1.1:+15819742 | None:intergenic |
| TCGAAGCCCGGGAAATTGAA+AGG | 0.535602 | 1.1:-15818448 | MS.gene33603:CDS |
| AGTACTTAGATTGGCGAGCT+CGG | 0.538321 | 1.1:-15821015 | MS.gene33603:CDS |
| AAAGAAGGAAGTGATGCTGC+TGG | 0.539768 | 1.1:+15819432 | None:intergenic |
| TTACCAATTCTTCCATGTAA+GGG | 0.540606 | 1.1:+15820221 | None:intergenic |
| CCTATGACAAGCTTGGAGTA+AGG | 0.541938 | 1.1:-15817672 | MS.gene33603:CDS |
| AGGGTAAGCAGACATGTAGT+TGG | 0.544078 | 1.1:+15818392 | None:intergenic |
| CCATTGGGATTTCGAAGCCC+GGG | 0.544164 | 1.1:-15818459 | MS.gene33603:CDS |
| TGGAAGAATTGGTAAATGAC+AGG | 0.544909 | 1.1:-15820213 | MS.gene33603:CDS |
| GGGATGATCTGGATTTGGCC+TGG | 0.548326 | 1.1:-15819465 | MS.gene33603:CDS |
| CATACTTCGACATTTGCTAA+GGG | 0.548563 | 1.1:-15819167 | MS.gene33603:CDS |
| AACTCCATATCAATCGGATA+GGG | 0.548896 | 1.1:+15818508 | None:intergenic |
| CCCGGGCTTCGAAATCCCAA+TGG | 0.553272 | 1.1:+15818459 | None:intergenic |
| CTTCGACATTTGCTAAGGGA+TGG | 0.553640 | 1.1:-15819163 | MS.gene33603:CDS |
| AAAAGGCATATGCTTAAGAA+GGG | 0.554581 | 1.1:+15818318 | None:intergenic |
| ATCAGAAGTACTTGGAGAAG+AGG | 0.554772 | 1.1:+15820150 | None:intergenic |
| CTGTACATACTGAAAGAAGA+AGG | 0.555644 | 1.1:-15820123 | MS.gene33603:CDS |
| CCAGTTACCTATGACAAGCT+TGG | 0.556416 | 1.1:-15817679 | MS.gene33603:CDS |
| GAGGATCTACGGCTAGTAGT+TGG | 0.556957 | 1.1:-15817745 | MS.gene33603:CDS |
| GCTCGTGAATTCAAGTCGAT+TGG | 0.558329 | 1.1:-15820441 | MS.gene33603:CDS |
| ATTAGCAGAAGCACACAGAC+AGG | 0.563331 | 1.1:-15820382 | MS.gene33603:intron |
| TGACTTAAAGGATGATTCCA+TGG | 0.565498 | 1.1:-15820011 | MS.gene33603:intron |
| ATTTACAGAGCCAAGATGAA+GGG | 0.571447 | 1.1:+15819743 | None:intergenic |
| AGAAGGAAGTGATGCTGCTG+GGG | 0.573018 | 1.1:+15819434 | None:intergenic |
| GGCTGGGAATATACGACAGA+CGG | 0.577816 | 1.1:-15819561 | MS.gene33603:CDS |
| TACCAAGCTTGACACCAAAA+GGG | 0.583881 | 1.1:-15822192 | MS.gene33603:intron |
| AGCAGACAAGAAAAGTGCGT+GGG | 0.586221 | 1.1:-15821140 | MS.gene33603:CDS |
| TTCAAGCCATAGAAGTAGCT+AGG | 0.586372 | 1.1:-15821048 | MS.gene33603:CDS |
| TATCCTTGCAGACCAGATGC+CGG | 0.588286 | 1.1:+15818538 | None:intergenic |
| ACTTATTAAATACCTCGGCA+TGG | 0.591232 | 1.1:+15819385 | None:intergenic |
| TTCCCTATTCCAGATCCCAA+TGG | 0.592203 | 1.1:-15819853 | MS.gene33603:intron |
| CATCTTGGCTCTGTAAATGA+GGG | 0.592271 | 1.1:-15819738 | MS.gene33603:CDS |
| GGGCGTGCGCAAGATCCAAA+AGG | 0.603628 | 1.1:+15819198 | None:intergenic |
| GACTTGAATTCACGAGCTAG+AGG | 0.604846 | 1.1:+15820447 | None:intergenic |
| GATGAATACTAACCGTGGTA+GGG | 0.606402 | 1.1:+15819702 | None:intergenic |
| ATGGAACTTCCGGTTGAACA+CGG | 0.610594 | 1.1:-15819236 | MS.gene33603:CDS |
| ACACCGGCATCTGGTCTGCA+AGG | 0.613320 | 1.1:-15818541 | MS.gene33603:CDS |
| TAATTATTGTGTGTGTTGAA+GGG | 0.617559 | 1.1:+15817604 | None:intergenic |
| TTACCCCTAAAGATAACCCA+TGG | 0.624924 | 1.1:+15819816 | None:intergenic |
| TGTCGAAGTATGAGTAAAAG+GGG | 0.625361 | 1.1:+15819178 | None:intergenic |
| ACTTGGAGAAGAGGACGTCT+CGG | 0.627193 | 1.1:+15820159 | None:intergenic |
| TTTACAGAGCCAAGATGAAG+GGG | 0.628748 | 1.1:+15819744 | None:intergenic |
| GAACCATGGGTTATCTTTAG+GGG | 0.632156 | 1.1:-15819819 | MS.gene33603:CDS |
| ATGGTTGATAGAACCATACA+AGG | 0.639943 | 1.1:+15818478 | None:intergenic |
| AGTAAGGTATAGGCTTTGGA+GGG | 0.643282 | 1.1:-15817656 | MS.gene33603:CDS |
| AAAGGCATATGCTTAAGAAG+GGG | 0.645865 | 1.1:+15818319 | None:intergenic |
| TGGATTTATAGTCCATGCCG+AGG | 0.645907 | 1.1:-15819397 | MS.gene33603:intron |
| GCATGGACTATAAATCCAGA+AGG | 0.652893 | 1.1:+15819402 | None:intergenic |
| GAAGGAAGTGATGCTGCTGG+GGG | 0.661858 | 1.1:+15819435 | None:intergenic |
| TGGACTATAAATCCAGAAGG+AGG | 0.679360 | 1.1:+15819405 | None:intergenic |
| AAGCAGACAAGAAAAGTGCG+TGG | 0.679985 | 1.1:-15821141 | MS.gene33603:CDS |
| GCAGACAAGAAAAGTGCGTG+GGG | 0.696719 | 1.1:-15821139 | MS.gene33603:CDS |
| GTTGATAGAACCATACAAGG+TGG | 0.758266 | 1.1:+15818481 | None:intergenic |
| CGTATCGCATGTCCCTACCA+CGG | 0.775057 | 1.1:-15819714 | MS.gene33603:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGTTTAAATTTAACAA+TGG | + | chr1.1:15818514-15818533 | None:intergenic | 10.0% |
| !!! | ATAAAATATAATTTGACTTT+AGG | - | chr1.1:15817882-15817901 | MS.gene33603:intron | 10.0% |
| !! | ACTATCAAAAAAACAAAAAA+AGG | + | chr1.1:15817723-15817742 | None:intergenic | 15.0% |
| !! | ATTCATTTCTCTAAATTTAA+TGG | + | chr1.1:15818192-15818211 | None:intergenic | 15.0% |
| !! | TATAAATTTAGTCACTATTT+AGG | - | chr1.1:15817933-15817952 | MS.gene33603:intron | 15.0% |
| !! | TTATGAAATGATAGATTTAT+AGG | - | chr1.1:15821237-15821256 | MS.gene33603:intron | 15.0% |
| !!! | GTTTTTTTTAGGTTTTTAAT+AGG | - | chr1.1:15818152-15818171 | MS.gene33603:intron | 15.0% |
| !!! | TATCATACATTGTTTTTTTT+AGG | - | chr1.1:15818141-15818160 | MS.gene33603:intron | 15.0% |
| !! | AAAAAAGAAGATAAAAGTCA+TGG | - | chr1.1:15820553-15820572 | MS.gene33603:intron | 20.0% |
| !! | ACTATACTTATTAAATACCT+CGG | + | chr1.1:15820471-15820490 | None:intergenic | 20.0% |
| !! | AGAAATTCTTTAAATTAGGA+TGG | + | chr1.1:15819795-15819814 | None:intergenic | 20.0% |
| !! | ATCCTAATTTAAAGAATTTC+TGG | - | chr1.1:15819794-15819813 | MS.gene33603:CDS | 20.0% |
| !! | ATTGAATCATATCACTTATA+AGG | + | chr1.1:15820739-15820758 | None:intergenic | 20.0% |
| !! | CCTTCAAAAAAAAAAACTTA+TGG | + | chr1.1:15820989-15821008 | None:intergenic | 20.0% |
| !! | TACCAGAAATTCTTTAAATT+AGG | + | chr1.1:15819799-15819818 | None:intergenic | 20.0% |
| !! | TCAAATAAGCAAATTAAAAC+AGG | + | chr1.1:15820897-15820916 | None:intergenic | 20.0% |
| !! | TCATAAAAATAAAAGAGACT+AGG | + | chr1.1:15817815-15817834 | None:intergenic | 20.0% |
| !! | TCATGTATCATAATAACTTA+GGG | - | chr1.1:15820871-15820890 | MS.gene33603:intron | 20.0% |
| !! | TCTTAATAATCAGAAACTAT+TGG | - | chr1.1:15819355-15819374 | MS.gene33603:intron | 20.0% |
| !! | TTCATGTATCATAATAACTT+AGG | - | chr1.1:15820870-15820889 | MS.gene33603:intron | 20.0% |
| !! | TTGAATCATATCACTTATAA+GGG | + | chr1.1:15820738-15820757 | None:intergenic | 20.0% |
| !!! | ATTTTTCTGAAATCAAGTTA+TGG | + | chr1.1:15821914-15821933 | None:intergenic | 20.0% |
| !!! | CCATAAGTTTTTTTTTTTGA+AGG | - | chr1.1:15820986-15821005 | MS.gene33603:CDS | 20.0% |
| !!! | TCTTTAGCTTATACTTTTTT+GGG | - | chr1.1:15818630-15818649 | MS.gene33603:intron | 20.0% |
| !!! | TTCTTTAGCTTATACTTTTT+TGG | - | chr1.1:15818629-15818648 | MS.gene33603:intron | 20.0% |
| ! | AAAATGAGTTACACTTCAAA+AGG | - | chr1.1:15821657-15821676 | MS.gene33603:intron | 25.0% |
| ! | AAACCATACTCTTTCATATA+TGG | + | chr1.1:15818605-15818624 | None:intergenic | 25.0% |
| ! | AAAGGACTAAAAGCAAAAAA+TGG | + | chr1.1:15819933-15819952 | None:intergenic | 25.0% |
| ! | AAGAAAAGCTTAAATGTATC+AGG | - | chr1.1:15819754-15819773 | MS.gene33603:CDS | 25.0% |
| ! | AATAAGCAGAAAACAACTTA+TGG | + | chr1.1:15821020-15821039 | None:intergenic | 25.0% |
| ! | AGACGACAAATATCTTTAAA+AGG | + | chr1.1:15819951-15819970 | None:intergenic | 25.0% |
| ! | ATAAGTTAATGAATTACTGC+AGG | - | chr1.1:15819561-15819580 | MS.gene33603:CDS | 25.0% |
| ! | ATGATATTGAGTACTTAGAT+TGG | - | chr1.1:15818824-15818843 | MS.gene33603:intron | 25.0% |
| ! | CAAAAAATGGTATATTTGCA+AGG | + | chr1.1:15819920-15819939 | None:intergenic | 25.0% |
| ! | CATTTCTCTAAATTTAATGG+TGG | + | chr1.1:15818189-15818208 | None:intergenic | 25.0% |
| ! | TAATTATTGTGTGTGTTGAA+GGG | + | chr1.1:15822247-15822266 | None:intergenic | 25.0% |
| ! | TCAATATGCGAAAATGAAAT+TGG | - | chr1.1:15820754-15820773 | MS.gene33603:intron | 25.0% |
| ! | TCAATTCAAACAAACATAGA+TGG | + | chr1.1:15819022-15819041 | None:intergenic | 25.0% |
| ! | TGATTATTAAGATAAGCACA+TGG | + | chr1.1:15819347-15819366 | None:intergenic | 25.0% |
| ! | TGTTGATATTTCCATACTTT+AGG | - | chr1.1:15822072-15822091 | MS.gene33603:intron | 25.0% |
| ! | TTAATTATTGTGTGTGTTGA+AGG | + | chr1.1:15822248-15822267 | None:intergenic | 25.0% |
| ! | TTTATGAAAACTTTGCTTAC+AGG | - | chr1.1:15817828-15817847 | MS.gene33603:intron | 25.0% |
| !! | AAAACTTTTCCTTTACTTAG+TGG | + | chr1.1:15818772-15818791 | None:intergenic | 25.0% |
| !! | AATATTATGTCCTTTTACTC+TGG | - | chr1.1:15818383-15818402 | MS.gene33603:CDS | 25.0% |
| !! | ACTAAGTAAAGGAAAAGTTT+TGG | - | chr1.1:15818771-15818790 | MS.gene33603:intron | 25.0% |
| !! | ACTTCAAAAGGAACAAATTT+TGG | - | chr1.1:15821669-15821688 | MS.gene33603:intron | 25.0% |
| !! | CTCATTTAAAACCTAAAGTA+TGG | + | chr1.1:15822086-15822105 | None:intergenic | 25.0% |
| !! | CTTCAAAAGGAACAAATTTT+GGG | - | chr1.1:15821670-15821689 | MS.gene33603:intron | 25.0% |
| !! | GATACATTTAAGCTTTTCTT+CGG | + | chr1.1:15819754-15819773 | None:intergenic | 25.0% |
| !!! | ATCTTTCTTGTGTTTGTTTT+TGG | - | chr1.1:15821996-15822015 | MS.gene33603:intron | 25.0% |
| !!! | CATACTTTAGGTTTTAAATG+AGG | - | chr1.1:15822084-15822103 | MS.gene33603:intron | 25.0% |
| !!! | CTTGTTTTATCTTTTGAAGA+GGG | + | chr1.1:15821478-15821497 | None:intergenic | 25.0% |
| !!! | GAACAAATTTTGGGTATTTA+TGG | - | chr1.1:15821679-15821698 | MS.gene33603:intron | 25.0% |
| !!! | TCTTGTTTTATCTTTTGAAG+AGG | + | chr1.1:15821479-15821498 | None:intergenic | 25.0% |
| !!! | TTTTGAAGTGTAACTCATTT+TGG | + | chr1.1:15821658-15821677 | None:intergenic | 25.0% |
| AAACTCTTGCTTCAGATATA+TGG | + | chr1.1:15819588-15819607 | None:intergenic | 30.0% | |
| AACTAGTAACTACTCAACAT+TGG | - | chr1.1:15821849-15821868 | MS.gene33603:intron | 30.0% | |
| AACTGAAATTTCCTAATGGT+TGG | - | chr1.1:15820258-15820277 | MS.gene33603:CDS | 30.0% | |
| AATCAGATACCATAAGAAAG+TGG | - | chr1.1:15821777-15821796 | MS.gene33603:intron | 30.0% | |
| AATGTCGAAGTATGAGTAAA+AGG | + | chr1.1:15820675-15820694 | None:intergenic | 30.0% | |
| ATACTCTTTCATATATGGAC+CGG | + | chr1.1:15818600-15818619 | None:intergenic | 30.0% | |
| ATATAGGGAGAATACAACAA+CGG | + | chr1.1:15819306-15819325 | None:intergenic | 30.0% | |
| ATGTCGAAGTATGAGTAAAA+GGG | + | chr1.1:15820674-15820693 | None:intergenic | 30.0% | |
| ATTCATCATATGTGCCTAAT+TGG | - | chr1.1:15821807-15821826 | MS.gene33603:intron | 30.0% | |
| ATTGCTATATAGAATGTCAC+TGG | - | chr1.1:15821498-15821517 | MS.gene33603:intron | 30.0% | |
| CAACAAGAGAGAATGAATAA+AGG | - | chr1.1:15822127-15822146 | MS.gene33603:intron | 30.0% | |
| CAGAAACTGAAATTTCCTAA+TGG | - | chr1.1:15820254-15820273 | MS.gene33603:CDS | 30.0% | |
| CATAGCTTAGAATACCTATT+AGG | + | chr1.1:15820498-15820517 | None:intergenic | 30.0% | |
| CTTATTTCCATAAACTCTCT+AGG | - | chr1.1:15819136-15819155 | MS.gene33603:intron | 30.0% | |
| CTTATTTGAGCTTATTTACC+TGG | - | chr1.1:15820908-15820927 | MS.gene33603:intron | 30.0% | |
| CTTTATTCATTCTCTCTTGT+TGG | + | chr1.1:15822129-15822148 | None:intergenic | 30.0% | |
| GAACTTAGAGAAACGAATTT+CGG | - | chr1.1:15818340-15818359 | MS.gene33603:CDS | 30.0% | |
| GACATATTTGAGCTTATCTA+TGG | - | chr1.1:15819040-15819059 | MS.gene33603:intron | 30.0% | |
| GATGCTTTATAGCACATATA+GGG | + | chr1.1:15819321-15819340 | None:intergenic | 30.0% | |
| GCACATATGATGAATAGTTA+TGG | + | chr1.1:15821892-15821911 | None:intergenic | 30.0% | |
| TAAGTATAGTCTGTCCTAAT+AGG | - | chr1.1:15820481-15820500 | MS.gene33603:intron | 30.0% | |
| TAATCAGAAACTATTGGTGT+AGG | - | chr1.1:15819361-15819380 | MS.gene33603:intron | 30.0% | |
| TATTAAGATAAGCACATGGT+GGG | + | chr1.1:15819343-15819362 | None:intergenic | 30.0% | |
| TCTAAATTTAATGGTGGCAT+AGG | + | chr1.1:15818183-15818202 | None:intergenic | 30.0% | |
| TTACCAATTCTTCCATGTAA+GGG | + | chr1.1:15819630-15819649 | None:intergenic | 30.0% | |
| TTATTAAGATAAGCACATGG+TGG | + | chr1.1:15819344-15819363 | None:intergenic | 30.0% | |
| TTGTGCTCAAGATGAATATT+TGG | - | chr1.1:15817775-15817794 | MS.gene33603:intron | 30.0% | |
| TTTACCAATTCTTCCATGTA+AGG | + | chr1.1:15819631-15819650 | None:intergenic | 30.0% | |
| TTTCACAAAACAGATTGTCA+TGG | - | chr1.1:15820593-15820612 | MS.gene33603:intron | 30.0% | |
| ! | AAAAGGCATATGCTTAAGAA+GGG | + | chr1.1:15821533-15821552 | None:intergenic | 30.0% |
| ! | AATTAGCTGAAACCTTTTCA+TGG | + | chr1.1:15818885-15818904 | None:intergenic | 30.0% |
| ! | ATGATATGCTTTTATGATGC+AGG | - | chr1.1:15821132-15821151 | MS.gene33603:CDS | 30.0% |
| ! | CAAATACGAATTTGAAGCTT+TGG | + | chr1.1:15819527-15819546 | None:intergenic | 30.0% |
| ! | CTCAAACTCGAATTCTAAAA+TGG | + | chr1.1:15818078-15818097 | None:intergenic | 30.0% |
| ! | GAAGTCTTTTTCTTTTGACA+AGG | - | chr1.1:15820816-15820835 | MS.gene33603:intron | 30.0% |
| ! | TAAAAGGCATATGCTTAAGA+AGG | + | chr1.1:15821534-15821553 | None:intergenic | 30.0% |
| ! | TAAAAGTACACCAGAGTAAA+AGG | + | chr1.1:15818396-15818415 | None:intergenic | 30.0% |
| ! | TATCTGATTTTCTAACCACT+CGG | + | chr1.1:15821766-15821785 | None:intergenic | 30.0% |
| ! | TCTGTTTTGTGAAAAGATAC+CGG | + | chr1.1:15820587-15820606 | None:intergenic | 30.0% |
| ! | TCTTAAGCATATGCCTTTTA+TGG | - | chr1.1:15821534-15821553 | MS.gene33603:intron | 30.0% |
| ! | TGAATAAAGGTGCAAATGTA+TGG | - | chr1.1:15822140-15822159 | MS.gene33603:intron | 30.0% |
| ! | TTGGTAGTTCTACAAAAGAT+AGG | + | chr1.1:15817642-15817661 | None:intergenic | 30.0% |
| !! | ACAGATTTATCAGAAGTACT+TGG | + | chr1.1:15819709-15819728 | None:intergenic | 30.0% |
| !! | ATTACTTTTGGACAACCTTT+TGG | - | chr1.1:15820635-15820654 | MS.gene33603:intron | 30.0% |
| !! | TGATAGTTGCTTGTTTTCTA+AGG | - | chr1.1:15817736-15817755 | MS.gene33603:CDS | 30.0% |
| !!! | AGGTTTTAAATGAGGATCTA+CGG | - | chr1.1:15822092-15822111 | MS.gene33603:intron | 30.0% |
| !!! | ATTCCATGTTTTGAGAAAGA+AGG | - | chr1.1:15820362-15820381 | MS.gene33603:intron | 30.0% |
| !!! | CTTTGTGAATTTTTTGACAC+CGG | - | chr1.1:15821291-15821310 | MS.gene33603:intron | 30.0% |
| !!! | TTCCATGTTTTGAGAAAGAA+GGG | - | chr1.1:15820363-15820382 | MS.gene33603:intron | 30.0% |
| AAAAGTAATCCGTGTTCAAC+CGG | + | chr1.1:15820624-15820643 | None:intergenic | 35.0% | |
| AAAAGTCATGGTTTCTTACC+CGG | - | chr1.1:15820565-15820584 | MS.gene33603:intron | 35.0% | |
| AAACTCCATATCAATCGGAT+AGG | + | chr1.1:15821344-15821363 | None:intergenic | 35.0% | |
| AACACTTCGTACAAAACTGT+AGG | + | chr1.1:15818468-15818487 | None:intergenic | 35.0% | |
| AACTCCATATCAATCGGATA+GGG | + | chr1.1:15821343-15821362 | None:intergenic | 35.0% | |
| AAGAAAGTTTCTCCTGTGTA+GGG | - | chr1.1:15818564-15818583 | MS.gene33603:intron | 35.0% | |
| AAGCTATCCTAGAGAGTTTA+TGG | + | chr1.1:15819146-15819165 | None:intergenic | 35.0% | |
| AAGCTGTTTATCCAAACAAG+TGG | - | chr1.1:15819268-15819287 | MS.gene33603:intron | 35.0% | |
| AATAAGCTGAAAGCAGCTTA+TGG | + | chr1.1:15819122-15819141 | None:intergenic | 35.0% | |
| ACATTTAGCATTCGAGTAGA+TGG | + | chr1.1:15820329-15820348 | None:intergenic | 35.0% | |
| ACTTATTAAATACCTCGGCA+TGG | + | chr1.1:15820466-15820485 | None:intergenic | 35.0% | |
| AGCTGTTTATCCAAACAAGT+GGG | - | chr1.1:15819269-15819288 | MS.gene33603:intron | 35.0% | |
| ATCCCTTCTTTCTCAAAACA+TGG | + | chr1.1:15820368-15820387 | None:intergenic | 35.0% | |
| ATTTACAGAGCCAAGATGAA+GGG | + | chr1.1:15820108-15820127 | None:intergenic | 35.0% | |
| ATTTACATAAGCTGCTACCT+TGG | + | chr1.1:15821055-15821074 | None:intergenic | 35.0% | |
| CAAACAAGTGGGATAAAGTT+TGG | - | chr1.1:15819280-15819299 | MS.gene33603:intron | 35.0% | |
| CAAACTTTATCCCACTTGTT+TGG | + | chr1.1:15819282-15819301 | None:intergenic | 35.0% | |
| CAATTGATTGTGTTTGAGCA+AGG | - | chr1.1:15821621-15821640 | MS.gene33603:intron | 35.0% | |
| CAGGGTTTGAAAGGTAAATT+TGG | - | chr1.1:15818664-15818683 | MS.gene33603:intron | 35.0% | |
| CTCCATAGATGTTCCATAAA+AGG | + | chr1.1:15821550-15821569 | None:intergenic | 35.0% | |
| CTGTACATACTGAAAGAAGA+AGG | - | chr1.1:15819725-15819744 | MS.gene33603:CDS | 35.0% | |
| GCGCAAATCAGAAATATCTA+AGG | + | chr1.1:15821178-15821197 | None:intergenic | 35.0% | |
| GGATGCTTTATAGCACATAT+AGG | + | chr1.1:15819322-15819341 | None:intergenic | 35.0% | |
| GGTATAAACGAAACAAACCT+AGG | + | chr1.1:15820717-15820736 | None:intergenic | 35.0% | |
| GGTCCATATATGAAAGAGTA+TGG | - | chr1.1:15818599-15818618 | MS.gene33603:intron | 35.0% | |
| GTGACCAGTCAAAAGTTATA+TGG | + | chr1.1:15819000-15819019 | None:intergenic | 35.0% | |
| GTGTTTGAGCAAGGAATAAA+AGG | - | chr1.1:15821630-15821649 | MS.gene33603:intron | 35.0% | |
| GTTCCTCAAAACATTCCATT+GGG | + | chr1.1:15820013-15820032 | None:intergenic | 35.0% | |
| GTTGGATCAAATTAGAGACT+TGG | - | chr1.1:15818972-15818991 | MS.gene33603:intron | 35.0% | |
| TCGAGTGGTTTAATAATAGG+TGG | - | chr1.1:15818024-15818043 | MS.gene33603:intron | 35.0% | |
| TGACTTAAAGGATGATTCCA+TGG | - | chr1.1:15819837-15819856 | MS.gene33603:CDS | 35.0% | |
| TGGAAGAATTGGTAAATGAC+AGG | - | chr1.1:15819635-15819654 | MS.gene33603:intron | 35.0% | |
| TGTCGAAGTATGAGTAAAAG+GGG | + | chr1.1:15820673-15820692 | None:intergenic | 35.0% | |
| TTATTTCCATGAGTTCTCCA+AGG | - | chr1.1:15821035-15821054 | MS.gene33603:CDS | 35.0% | |
| TTTCCTAATGGTTGGATATC+AGG | - | chr1.1:15820266-15820285 | MS.gene33603:CDS | 35.0% | |
| TTTGGATAAACTCCCTTACA+TGG | - | chr1.1:15819615-15819634 | MS.gene33603:intron | 35.0% | |
| ! | AAAGGCATATGCTTAAGAAG+GGG | + | chr1.1:15821532-15821551 | None:intergenic | 35.0% |
| ! | AAGAAAGAGATGTACCCTTT+TGG | + | chr1.1:15817673-15817692 | None:intergenic | 35.0% |
| ! | ATACGAATTTGAAGCTTTGG+TGG | + | chr1.1:15819524-15819543 | None:intergenic | 35.0% |
| ! | CATACTTCGACATTTGCTAA+GGG | - | chr1.1:15820681-15820700 | MS.gene33603:intron | 35.0% |
| ! | CTGTTTTGTGAAAAGATACC+GGG | + | chr1.1:15820586-15820605 | None:intergenic | 35.0% |
| ! | CTTTTATGGAACATCTATGG+AGG | - | chr1.1:15821548-15821567 | MS.gene33603:intron | 35.0% |
| ! | GGTACCATATAACTTTTGAC+TGG | - | chr1.1:15818993-15819012 | MS.gene33603:intron | 35.0% |
| ! | GTATGGTTCTATCAACCATT+GGG | - | chr1.1:15821374-15821393 | MS.gene33603:intron | 35.0% |
| ! | GTTATCTTTAGGGGTAAAGA+TGG | - | chr1.1:15820038-15820057 | MS.gene33603:CDS | 35.0% |
| ! | TCATACTTCGACATTTGCTA+AGG | - | chr1.1:15820680-15820699 | MS.gene33603:intron | 35.0% |
| ! | TGACAACTTGTCATCCATTT+TGG | + | chr1.1:15818280-15818299 | None:intergenic | 35.0% |
| ! | TGCCTTTTATGGAACATCTA+TGG | - | chr1.1:15821545-15821564 | MS.gene33603:intron | 35.0% |
| ! | TGTATGGTTCTATCAACCAT+TGG | - | chr1.1:15821373-15821392 | MS.gene33603:intron | 35.0% |
| !! | ATACTCTTGCCACTTTCTTA+TGG | + | chr1.1:15821789-15821808 | None:intergenic | 35.0% |
| !! | ATGGTTGATAGAACCATACA+AGG | + | chr1.1:15821373-15821392 | None:intergenic | 35.0% |
| !! | CATGTATTTTGAACACATCC+AGG | + | chr1.1:15820068-15820087 | None:intergenic | 35.0% |
| !! | TAGGTTGACTTGTAAGGTAA+GGG | - | chr1.1:15817901-15817920 | MS.gene33603:intron | 35.0% |
| !! | TGACTTTAGGTTGACTTGTA+AGG | - | chr1.1:15817895-15817914 | MS.gene33603:intron | 35.0% |
| !! | TTAGGTTGACTTGTAAGGTA+AGG | - | chr1.1:15817900-15817919 | MS.gene33603:intron | 35.0% |
| !!! | GCTTATACTTTTTTGGGTTG+TGG | - | chr1.1:15818636-15818655 | MS.gene33603:intron | 35.0% |
| !!! | TTTTGGGTTGTGGATTTTCA+GGG | - | chr1.1:15818646-15818665 | MS.gene33603:intron | 35.0% |
| !!! | TTTTTGGGTTGTGGATTTTC+AGG | - | chr1.1:15818645-15818664 | MS.gene33603:intron | 35.0% |
| AAGAAGGGATGATCTGGATT+TGG | - | chr1.1:15820378-15820397 | MS.gene33603:intron | 40.0% | |
| AAGCCCTTGTGAGACTATTT+GGG | - | chr1.1:15819067-15819086 | MS.gene33603:intron | 40.0% | |
| ACAAGCTTGGAGTAAGGTAT+AGG | - | chr1.1:15822182-15822201 | MS.gene33603:intron | 40.0% | |
| ACAGATTGTCATGGAACTTC+CGG | - | chr1.1:15820602-15820621 | MS.gene33603:intron | 40.0% | |
| ACCATGAAAAAGGATCTAGC+TGG | - | chr1.1:15819431-15819450 | MS.gene33603:CDS | 40.0% | |
| ACCCTAATTTGAGCATGCAA+CGG | + | chr1.1:15818318-15818337 | None:intergenic | 40.0% | |
| ACTCCCTTACATGGAAGAAT+TGG | - | chr1.1:15819624-15819643 | MS.gene33603:intron | 40.0% | |
| AGCAAGAGTTTCTACTGCTT+TGG | - | chr1.1:15819597-15819616 | MS.gene33603:intron | 40.0% | |
| ATCATGCCTAGCTACTTCTA+TGG | + | chr1.1:15818809-15818828 | None:intergenic | 40.0% | |
| ATCTGGTCTGCAAGGATATT+GGG | - | chr1.1:15821315-15821334 | MS.gene33603:intron | 40.0% | |
| CAAAACATTCCATTGGGATC+TGG | + | chr1.1:15820007-15820026 | None:intergenic | 40.0% | |
| CAGGTGTGTTGAACATTCTT+TGG | + | chr1.1:15821434-15821453 | None:intergenic | 40.0% | |
| CATTTACAGAGCCAAGATGA+AGG | + | chr1.1:15820109-15820128 | None:intergenic | 40.0% | |
| CCATGAAAAAGGATCTAGCT+GGG | - | chr1.1:15819432-15819451 | MS.gene33603:CDS | 40.0% | |
| CTACCACGGTTAGTATTCAT+CGG | - | chr1.1:15820148-15820167 | MS.gene33603:CDS | 40.0% | |
| CTTTGTCCTTTCAATTTCCC+GGG | + | chr1.1:15821409-15821428 | None:intergenic | 40.0% | |
| GAAGAAAGTTTCTCCTGTGT+AGG | - | chr1.1:15818563-15818582 | MS.gene33603:intron | 40.0% | |
| GATGAATACTAACCGTGGTA+GGG | + | chr1.1:15820149-15820168 | None:intergenic | 40.0% | |
| GCTTTGTCCTTTCAATTTCC+CGG | + | chr1.1:15821410-15821429 | None:intergenic | 40.0% | |
| GGATTGATATCGACATACCA+TGG | + | chr1.1:15819857-15819876 | None:intergenic | 40.0% | |
| GGCTCGAGTGGTTTAATAAT+AGG | - | chr1.1:15818021-15818040 | MS.gene33603:intron | 40.0% | |
| GGTCGAAACTCCATATCAAT+CGG | + | chr1.1:15821349-15821368 | None:intergenic | 40.0% | |
| GGTTCCTCAAAACATTCCAT+TGG | + | chr1.1:15820014-15820033 | None:intergenic | 40.0% | |
| GTCTCTAATTTGATCCAACG+AGG | + | chr1.1:15818971-15818990 | None:intergenic | 40.0% | |
| TAAAGCAGAAGCAGTAGCTA+TGG | + | chr1.1:15817613-15817632 | None:intergenic | 40.0% | |
| TAAGCCCTTGTGAGACTATT+TGG | - | chr1.1:15819066-15819085 | MS.gene33603:intron | 40.0% | |
| TAATGGTTGGATATCAGGCT+GGG | - | chr1.1:15820271-15820290 | MS.gene33603:intron | 40.0% | |
| TACCAAGCTTGACACCAAAA+GGG | - | chr1.1:15817656-15817675 | MS.gene33603:CDS | 40.0% | |
| TACCTCAATCTCAAGACTTG+TGG | - | chr1.1:15818000-15818019 | MS.gene33603:intron | 40.0% | |
| TCAGAAACTATTGGTGTAGG+TGG | - | chr1.1:15819364-15819383 | MS.gene33603:intron | 40.0% | |
| TCTCCATCGAAGAACCAATT+AGG | + | chr1.1:15821824-15821843 | None:intergenic | 40.0% | |
| TCTCCCAAATAGTCTCACAA+GGG | + | chr1.1:15819073-15819092 | None:intergenic | 40.0% | |
| TGGACTATAAATCCAGAAGG+AGG | + | chr1.1:15820446-15820465 | None:intergenic | 40.0% | |
| TTACCCCTAAAGATAACCCA+TGG | + | chr1.1:15820035-15820054 | None:intergenic | 40.0% | |
| TTAGGATGGTATGACTGAAC+TGG | + | chr1.1:15819781-15819800 | None:intergenic | 40.0% | |
| TTCAAGCCATAGAAGTAGCT+AGG | - | chr1.1:15818800-15818819 | MS.gene33603:intron | 40.0% | |
| TTGAGAAAGAAGGGATGATC+TGG | - | chr1.1:15820372-15820391 | MS.gene33603:intron | 40.0% | |
| TTGGAGTAAGGTATAGGCTT+TGG | - | chr1.1:15822188-15822207 | MS.gene33603:intron | 40.0% | |
| TTTACAGAGCCAAGATGAAG+GGG | + | chr1.1:15820107-15820126 | None:intergenic | 40.0% | |
| ! | AGGAACCATGGGTTATCTTT+AGG | - | chr1.1:15820027-15820046 | MS.gene33603:CDS | 40.0% |
| ! | ATTCCATTGGGATCTGGAAT+AGG | + | chr1.1:15820001-15820020 | None:intergenic | 40.0% |
| ! | GAACCATGGGTTATCTTTAG+GGG | - | chr1.1:15820029-15820048 | MS.gene33603:CDS | 40.0% |
| ! | GATCCCAATGGAATGTTTTG+AGG | - | chr1.1:15820007-15820026 | MS.gene33603:intron | 40.0% |
| ! | GCATGGACTATAAATCCAGA+AGG | + | chr1.1:15820449-15820468 | None:intergenic | 40.0% |
| ! | GGAACCATGGGTTATCTTTA+GGG | - | chr1.1:15820028-15820047 | MS.gene33603:CDS | 40.0% |
| ! | GTTGATAGAACCATACAAGG+TGG | + | chr1.1:15821370-15821389 | None:intergenic | 40.0% |
| ! | TAGCTGAAACCTTTTCATGG+AGG | + | chr1.1:15818882-15818901 | None:intergenic | 40.0% |
| ! | TCTAAAGCGCCACTAAGTAA+AGG | - | chr1.1:15818760-15818779 | MS.gene33603:intron | 40.0% |
| ! | TTCCATTGGGATCTGGAATA+GGG | + | chr1.1:15820000-15820019 | None:intergenic | 40.0% |
| !! | AGTAAGGTATAGGCTTTGGA+GGG | - | chr1.1:15822192-15822211 | MS.gene33603:intron | 40.0% |
| !! | ATCAGAAGTACTTGGAGAAG+AGG | + | chr1.1:15819701-15819720 | None:intergenic | 40.0% |
| !! | CATCTTGGCTCTGTAAATGA+GGG | - | chr1.1:15820110-15820129 | MS.gene33603:CDS | 40.0% |
| !! | GGTTGAACACGGATTACTTT+TGG | - | chr1.1:15820623-15820642 | MS.gene33603:intron | 40.0% |
| !! | GTGGATTTTCAGGGTTTGAA+AGG | - | chr1.1:15818655-15818674 | MS.gene33603:intron | 40.0% |
| !! | TCATCTTGGCTCTGTAAATG+AGG | - | chr1.1:15820109-15820128 | MS.gene33603:CDS | 40.0% |
| !! | TGCTTTCTCTGCTGACTTAA+AGG | - | chr1.1:15819825-15819844 | MS.gene33603:CDS | 40.0% |
| !! | TTTGGAGTGTTTGCTGTGTT+TGG | - | chr1.1:15818682-15818701 | MS.gene33603:intron | 40.0% |
| !!! | AATTTTTTGACACCGGCATC+TGG | - | chr1.1:15821298-15821317 | MS.gene33603:intron | 40.0% |
| !!! | GGAATGTTTTGAGGAACCAT+GGG | - | chr1.1:15820016-15820035 | MS.gene33603:CDS | 40.0% |
| !!! | TGGAATGTTTTGAGGAACCA+TGG | - | chr1.1:15820015-15820034 | MS.gene33603:CDS | 40.0% |
| AAAGAAGGAAGTGATGCTGC+TGG | + | chr1.1:15820419-15820438 | None:intergenic | 45.0% | |
| AAGAAGGAAGTGATGCTGCT+GGG | + | chr1.1:15820418-15820437 | None:intergenic | 45.0% | |
| AAGTCAGCAGAGAAAGCAAC+AGG | + | chr1.1:15819823-15819842 | None:intergenic | 45.0% | |
| ACCTCCAACTTTGTCGAGTT+AGG | + | chr1.1:15818101-15818120 | None:intergenic | 45.0% | |
| AGCCACAAGTCTTGAGATTG+AGG | + | chr1.1:15818005-15818024 | None:intergenic | 45.0% | |
| AGGGTAAGCAGACATGTAGT+TGG | + | chr1.1:15821459-15821478 | None:intergenic | 45.0% | |
| AGTACTTAGATTGGCGAGCT+CGG | - | chr1.1:15818833-15818852 | MS.gene33603:intron | 45.0% | |
| ATGGAACTTCCGGTTGAACA+CGG | - | chr1.1:15820612-15820631 | MS.gene33603:intron | 45.0% | |
| CAGCCTGATATCCAACCATT+AGG | + | chr1.1:15820272-15820291 | None:intergenic | 45.0% | |
| CATCATGCTCCTCCATGAAA+AGG | - | chr1.1:15818870-15818889 | MS.gene33603:intron | 45.0% | |
| CATCTGGTCTGCAAGGATAT+TGG | - | chr1.1:15821314-15821333 | MS.gene33603:intron | 45.0% | |
| CCAAGCTTGTCATAGGTAAC+TGG | + | chr1.1:15822172-15822191 | None:intergenic | 45.0% | |
| CCAGAAGGAGGTAGTAAAGA+AGG | + | chr1.1:15820434-15820453 | None:intergenic | 45.0% | |
| CCAGTTACCTATGACAAGCT+TGG | - | chr1.1:15822169-15822188 | MS.gene33603:intron | 45.0% | |
| CCTATGACAAGCTTGGAGTA+AGG | - | chr1.1:15822176-15822195 | MS.gene33603:intron | 45.0% | |
| CCTTACTCCAAGCTTGTCAT+AGG | + | chr1.1:15822179-15822198 | None:intergenic | 45.0% | |
| CCTTCTTTACTACCTCCTTC+TGG | - | chr1.1:15820431-15820450 | MS.gene33603:CDS | 45.0% | |
| CGATGAATACTAACCGTGGT+AGG | + | chr1.1:15820150-15820169 | None:intergenic | 45.0% | |
| CTAATGGTTGGATATCAGGC+TGG | - | chr1.1:15820270-15820289 | MS.gene33603:intron | 45.0% | |
| CTACCAAGCTTGACACCAAA+AGG | - | chr1.1:15817655-15817674 | MS.gene33603:CDS | 45.0% | |
| CTCTCCCAAATAGTCTCACA+AGG | + | chr1.1:15819074-15819093 | None:intergenic | 45.0% | |
| GACTTGAATTCACGAGCTAG+AGG | + | chr1.1:15819404-15819423 | None:intergenic | 45.0% | |
| GCCGTTGCATGCTCAAATTA+GGG | - | chr1.1:15818314-15818333 | MS.gene33603:CDS | 45.0% | |
| GCTCGTGAATTCAAGTCGAT+TGG | - | chr1.1:15819407-15819426 | MS.gene33603:CDS | 45.0% | |
| GGATCCCTATCCGATTGATA+TGG | - | chr1.1:15821336-15821355 | MS.gene33603:intron | 45.0% | |
| GGGTGCGATATTTGATGTAC+AGG | - | chr1.1:15818729-15818748 | MS.gene33603:intron | 45.0% | |
| GTCGATTGGCACCATGAAAA+AGG | - | chr1.1:15819421-15819440 | MS.gene33603:CDS | 45.0% | |
| GTTCCGATGAATACTAACCG+TGG | + | chr1.1:15820154-15820173 | None:intergenic | 45.0% | |
| TAACCACTCGGACAAATCAC+AGG | + | chr1.1:15821754-15821773 | None:intergenic | 45.0% | |
| TAAGCACTTGTGGGACTGTT+TGG | - | chr1.1:15820933-15820952 | MS.gene33603:intron | 45.0% | |
| TACCTGGCATAAGCACTTGT+GGG | - | chr1.1:15820924-15820943 | MS.gene33603:intron | 45.0% | |
| TGAGCCTAACTCGACAAAGT+TGG | - | chr1.1:15818094-15818113 | MS.gene33603:intron | 45.0% | |
| TGCAACGGCGTTAAAACTCT+TGG | + | chr1.1:15818303-15818322 | None:intergenic | 45.0% | |
| TGGAGGGATGCATTGGAAAA+GGG | - | chr1.1:15822208-15822227 | MS.gene33603:CDS | 45.0% | |
| TGGATTTATAGTCCATGCCG+AGG | - | chr1.1:15820451-15820470 | MS.gene33603:CDS | 45.0% | |
| TGTGTAGGGTCTACATCTTC+CGG | - | chr1.1:15818578-15818597 | MS.gene33603:intron | 45.0% | |
| TTACCTGGCATAAGCACTTG+TGG | - | chr1.1:15820923-15820942 | MS.gene33603:intron | 45.0% | |
| TTCCCTATTCCAGATCCCAA+TGG | - | chr1.1:15819995-15820014 | MS.gene33603:intron | 45.0% | |
| TTGGAGGGATGCATTGGAAA+AGG | - | chr1.1:15822207-15822226 | MS.gene33603:CDS | 45.0% | |
| ! | AAGCAGACAAGAAAAGTGCG+TGG | - | chr1.1:15818707-15818726 | MS.gene33603:intron | 45.0% |
| ! | AGCAGACAAGAAAAGTGCGT+GGG | - | chr1.1:15818708-15818727 | MS.gene33603:intron | 45.0% |
| ! | ATTAGCAGAAGCACACAGAC+AGG | - | chr1.1:15819466-15819485 | MS.gene33603:CDS | 45.0% |
| ! | ATTGGGATCTGGAATAGGGA+AGG | + | chr1.1:15819996-15820015 | None:intergenic | 45.0% |
| ! | CTTAGTGGCGCTTTAGATCT+TGG | + | chr1.1:15818757-15818776 | None:intergenic | 45.0% |
| ! | CTTCGACATTTGCTAAGGGA+TGG | - | chr1.1:15820685-15820704 | MS.gene33603:intron | 45.0% |
| ! | GAGTAAGGTATAGGCTTTGG+AGG | - | chr1.1:15822191-15822210 | MS.gene33603:intron | 45.0% |
| ! | GTGCCTAATTGGTTCTTCGA+TGG | - | chr1.1:15821818-15821837 | MS.gene33603:intron | 45.0% |
| !! | CCCAGCTAGATCCTTTTTCA+TGG | + | chr1.1:15819435-15819454 | None:intergenic | 45.0% |
| !! | CTTTTCATGGAGGAGCATGA+TGG | + | chr1.1:15818872-15818891 | None:intergenic | 45.0% |
| !! | TCATCCATTTTGGTCCCACA+AGG | + | chr1.1:15818270-15818289 | None:intergenic | 45.0% |
| !!! | ATGGAGGCATTTTGCAGAAC+AGG | - | chr1.1:15821564-15821583 | MS.gene33603:intron | 45.0% |
| !!! | TACCCTTTTGGTGTCAAGCT+TGG | + | chr1.1:15817661-15817680 | None:intergenic | 45.0% |
| !!! | ATCATTTTTTTTAAATAAAA+AGG | + | chr1.1:15819878-15819897 | None:intergenic | 5.0% |
| AAAGGATCTAGCTGGGTTGC+AGG | - | chr1.1:15819439-15819458 | MS.gene33603:CDS | 50.0% | |
| ACCATTGGGATTTCGAAGCC+CGG | - | chr1.1:15821388-15821407 | MS.gene33603:intron | 50.0% | |
| ACTCGACAAAGTTGGAGGTG+TGG | - | chr1.1:15818102-15818121 | MS.gene33603:intron | 50.0% | |
| ACTTGGAGAAGAGGACGTCT+CGG | + | chr1.1:15819692-15819711 | None:intergenic | 50.0% | |
| AGAAGGAAGTGATGCTGCTG+GGG | + | chr1.1:15820417-15820436 | None:intergenic | 50.0% | |
| AGAGCATGTCCCCTTCATCT+TGG | - | chr1.1:15820095-15820114 | MS.gene33603:CDS | 50.0% | |
| AGGGGTAAAGATGGCAAACC+TGG | - | chr1.1:15820047-15820066 | MS.gene33603:CDS | 50.0% | |
| CACTCGGACAAATCACAGGT+TGG | + | chr1.1:15821750-15821769 | None:intergenic | 50.0% | |
| CGCCGTTGCATGCTCAAATT+AGG | - | chr1.1:15818313-15818332 | MS.gene33603:CDS | 50.0% | |
| CTGCTACCTTGGAGAACTCA+TGG | + | chr1.1:15821044-15821063 | None:intergenic | 50.0% | |
| GAGGATCTACGGCTAGTAGT+TGG | - | chr1.1:15822103-15822122 | MS.gene33603:intron | 50.0% | |
| GCCTAACTCGACAAAGTTGG+AGG | - | chr1.1:15818097-15818116 | MS.gene33603:intron | 50.0% | |
| GGAAGATGTAGACCCTACAC+AGG | + | chr1.1:15818579-15818598 | None:intergenic | 50.0% | |
| GGAGTTTCGACCACCTTGTA+TGG | - | chr1.1:15821357-15821376 | MS.gene33603:intron | 50.0% | |
| GGCTGGGAATATACGACAGA+CGG | - | chr1.1:15820287-15820306 | MS.gene33603:intron | 50.0% | |
| TATCCTTGCAGACCAGATGC+CGG | + | chr1.1:15821313-15821332 | None:intergenic | 50.0% | |
| TCGAAGCCCGGGAAATTGAA+AGG | - | chr1.1:15821400-15821419 | MS.gene33603:intron | 50.0% | |
| ! | AGCAGACATGTAGTTGGTGC+AGG | + | chr1.1:15821453-15821472 | None:intergenic | 50.0% |
| ! | CAACCTGTGATTTGTCCGAG+TGG | - | chr1.1:15821748-15821767 | MS.gene33603:intron | 50.0% |
| ! | CTAAGGGATGGAGTGTTCCT+AGG | - | chr1.1:15820697-15820716 | MS.gene33603:intron | 50.0% |
| ! | GCAGACAAGAAAAGTGCGTG+GGG | - | chr1.1:15818709-15818728 | MS.gene33603:intron | 50.0% |
| !! | TAGGCTTTGGAGGGATGCAT+TGG | - | chr1.1:15822201-15822220 | MS.gene33603:CDS | 50.0% |
| CAGACATGCATGCACCTCGT+TGG | - | chr1.1:15818954-15818973 | MS.gene33603:intron | 55.0% | |
| CCATTGGGATTTCGAAGCCC+GGG | - | chr1.1:15821389-15821408 | MS.gene33603:intron | 55.0% | |
| CGTATCGCATGTCCCTACCA+CGG | - | chr1.1:15820134-15820153 | MS.gene33603:CDS | 55.0% | |
| CTCAAGACTTGTGGCTCGAG+TGG | - | chr1.1:15818009-15818028 | MS.gene33603:intron | 55.0% | |
| GAAGGAAGTGATGCTGCTGG+GGG | + | chr1.1:15820416-15820435 | None:intergenic | 55.0% | |
| GATTACGCAGTTGCGTGCGA+AGG | + | chr1.1:15818240-15818259 | None:intergenic | 55.0% | |
| GGGATGATCTGGATTTGGCC+TGG | - | chr1.1:15820383-15820402 | MS.gene33603:CDS | 55.0% | |
| GTCCCACAAGTGCTTATGCC+AGG | + | chr1.1:15820929-15820948 | None:intergenic | 55.0% | |
| TTTGGTCCCACAAGGCTCGA+GGG | + | chr1.1:15818262-15818281 | None:intergenic | 55.0% | |
| ! | CGAGCCTTGTGGGACCAAAA+TGG | - | chr1.1:15818263-15818282 | MS.gene33603:intron | 55.0% |
| ! | CGTAATCCCTCGAGCCTTGT+GGG | - | chr1.1:15818253-15818272 | MS.gene33603:intron | 55.0% |
| ! | TTTTGGTCCCACAAGGCTCG+AGG | + | chr1.1:15818263-15818282 | None:intergenic | 55.0% |
| ACACCGGCATCTGGTCTGCA+AGG | - | chr1.1:15821307-15821326 | MS.gene33603:intron | 60.0% | |
| CCCGGGCTTCGAAATCCCAA+TGG | + | chr1.1:15821392-15821411 | None:intergenic | 60.0% | |
| GCGTAATCCCTCGAGCCTTG+TGG | - | chr1.1:15818252-15818271 | MS.gene33603:intron | 60.0% | |
| GGGCGTGCGCAAGATCCAAA+AGG | + | chr1.1:15820653-15820672 | None:intergenic | 60.0% | |
| GCTGCTGGGGGATCACTGCC+AGG | + | chr1.1:15820404-15820423 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 15817603 | 15822267 | 15817603 | ID=MS.gene33603 |
| chr1.1 | mRNA | 15817603 | 15822267 | 15817603 | ID=MS.gene33603.t1;Parent=MS.gene33603 |
| chr1.1 | exon | 15822193 | 15822267 | 15822193 | ID=MS.gene33603.t1.exon1;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15822193 | 15822267 | 15822193 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15820979 | 15821203 | 15820979 | ID=MS.gene33603.t1.exon2;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15820979 | 15821203 | 15820979 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15820383 | 15820487 | 15820383 | ID=MS.gene33603.t1.exon3;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15820383 | 15820487 | 15820383 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15820012 | 15820287 | 15820012 | ID=MS.gene33603.t1.exon4;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15820012 | 15820287 | 15820012 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15819715 | 15819862 | 15819715 | ID=MS.gene33603.t1.exon5;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15819715 | 15819862 | 15819715 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15819398 | 15819582 | 15819398 | ID=MS.gene33603.t1.exon6;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15819398 | 15819582 | 15819398 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15819152 | 15819264 | 15819152 | ID=MS.gene33603.t1.exon7;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15819152 | 15819264 | 15819152 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15818285 | 15818579 | 15818285 | ID=MS.gene33603.t1.exon8;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15818285 | 15818579 | 15818285 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| chr1.1 | exon | 15817603 | 15817776 | 15817603 | ID=MS.gene33603.t1.exon9;Parent=MS.gene33603.t1 |
| chr1.1 | CDS | 15817603 | 15817776 | 15817603 | ID=cds.MS.gene33603.t1;Parent=MS.gene33603.t1 |
| Gene Sequence |
| Protein sequence |
