Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06752.t1 | XP_003602198.1 | 98.2 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 8.60E-278 | 965.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06752.t1 | Q9ZNX9 | 57.1 | 517 | 219 | 1 | 1 | 514 | 1 | 517 | 4.5e-150 | 532.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06752.t1 | G7J6R7 | 98.2 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 6.2e-278 | 965.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene06752 | 0.83184 | 1.33E-55 | -1.69E-46 |
| MS.gene049222 | MS.gene06752 | 0.825955 | 3.53E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene06752 | 0.879946 | 8.22E-70 | -1.69E-46 |
| MS.gene049285 | MS.gene06752 | 0.824522 | 7.71E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene06752 | 0.834654 | 2.64E-56 | -1.69E-46 |
| MS.gene049369 | MS.gene06752 | 0.811677 | 6.21E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene06752 | 0.878162 | 3.51E-69 | -1.69E-46 |
| MS.gene049609 | MS.gene06752 | 0.823806 | 1.14E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene06752 | 0.857191 | 1.93E-62 | -1.69E-46 |
| MS.gene05010 | MS.gene06752 | 0.84581 | 3.22E-59 | -1.69E-46 |
| MS.gene050170 | MS.gene06752 | 0.899822 | 1.35E-77 | -1.69E-46 |
| MS.gene050216 | MS.gene06752 | 0.848315 | 6.63E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene06752 | 0.91997 | 2.31E-87 | -1.69E-46 |
| MS.gene050381 | MS.gene06752 | -0.80713 | 5.87E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene06752 | 0.882219 | 1.25E-70 | -1.69E-46 |
| MS.gene050499 | MS.gene06752 | 0.808865 | 2.51E-50 | -1.69E-46 |
| MS.gene050502 | MS.gene06752 | 0.899954 | 1.19E-77 | -1.69E-46 |
| MS.gene050504 | MS.gene06752 | 0.850893 | 1.26E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene06752 | 0.804788 | 1.83E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene06752 | 0.821801 | 3.33E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene06752 | 0.853565 | 2.20E-61 | -1.69E-46 |
| MS.gene050662 | MS.gene06752 | 0.80283 | 4.66E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene06752 | 0.840522 | 8.26E-58 | -1.69E-46 |
| MS.gene050697 | MS.gene06752 | 0.888861 | 4.05E-73 | -1.69E-46 |
| MS.gene050747 | MS.gene06752 | 0.813411 | 2.59E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene06752 | 0.839653 | 1.39E-57 | -1.69E-46 |
| MS.gene05080 | MS.gene06752 | 0.868816 | 4.93E-66 | -1.69E-46 |
| MS.gene05081 | MS.gene06752 | 0.814079 | 1.85E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene06752 | 0.896734 | 2.78E-76 | -1.69E-46 |
| MS.gene050871 | MS.gene06752 | 0.898839 | 3.58E-77 | -1.69E-46 |
| MS.gene050904 | MS.gene06752 | 0.821315 | 4.31E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene06752 | 0.813408 | 2.60E-51 | -1.69E-46 |
| MS.gene050986 | MS.gene06752 | 0.847216 | 1.33E-59 | -1.69E-46 |
| MS.gene051127 | MS.gene06752 | -0.808176 | 3.52E-50 | -1.69E-46 |
| MS.gene051138 | MS.gene06752 | -0.815327 | 9.78E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene06752 | 0.883686 | 3.64E-71 | -1.69E-46 |
| MS.gene051317 | MS.gene06752 | 0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene06752 | 0.875822 | 2.28E-68 | -1.69E-46 |
| MS.gene051551 | MS.gene06752 | 0.813174 | 2.92E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene06752 | -0.832622 | 8.51E-56 | -1.69E-46 |
| MS.gene051734 | MS.gene06752 | 0.848471 | 6.00E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene06752 | 0.851609 | 7.94E-61 | -1.69E-46 |
| MS.gene051874 | MS.gene06752 | 0.851438 | 8.87E-61 | -1.69E-46 |
| MS.gene051941 | MS.gene06752 | 0.840816 | 6.92E-58 | -1.69E-46 |
| MS.gene052066 | MS.gene06752 | 0.847206 | 1.34E-59 | -1.69E-46 |
| MS.gene052100 | MS.gene06752 | 0.832031 | 1.19E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene06752 | 0.874433 | 6.78E-68 | -1.69E-46 |
| MS.gene052414 | MS.gene06752 | 0.813731 | 2.21E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene06752 | 0.835562 | 1.56E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene06752 | 0.832681 | 8.23E-56 | -1.69E-46 |
| MS.gene052503 | MS.gene06752 | 0.83254 | 8.92E-56 | -1.69E-46 |
| MS.gene052504 | MS.gene06752 | 0.821211 | 4.56E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene06752 | 0.837786 | 4.23E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene06752 | 0.850273 | 1.89E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene06752 | 0.834271 | 3.30E-56 | -1.69E-46 |
| MS.gene052825 | MS.gene06752 | 0.822192 | 2.70E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene06752 | 0.806923 | 6.50E-50 | -1.69E-46 |
| MS.gene052872 | MS.gene06752 | 0.822782 | 1.97E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene06752 | 0.855491 | 6.09E-62 | -1.69E-46 |
| MS.gene053203 | MS.gene06752 | 0.837828 | 4.13E-57 | -1.69E-46 |
| MS.gene053286 | MS.gene06752 | 0.802997 | 4.30E-49 | -1.69E-46 |
| MS.gene053420 | MS.gene06752 | -0.829038 | 6.44E-55 | -1.69E-46 |
| MS.gene053436 | MS.gene06752 | 0.808294 | 3.32E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene06752 | 0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene06752 | 0.838606 | 2.60E-57 | -1.69E-46 |
| MS.gene053480 | MS.gene06752 | 0.814968 | 1.18E-51 | -1.69E-46 |
| MS.gene053505 | MS.gene06752 | 0.823096 | 1.67E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene06752 | 0.863835 | 1.87E-64 | -1.69E-46 |
| MS.gene053626 | MS.gene06752 | 0.848881 | 4.62E-60 | -1.69E-46 |
| MS.gene053633 | MS.gene06752 | 0.833923 | 4.04E-56 | -1.69E-46 |
| MS.gene053824 | MS.gene06752 | 0.871193 | 8.23E-67 | -1.69E-46 |
| MS.gene053912 | MS.gene06752 | 0.816278 | 6.01E-52 | -1.69E-46 |
| MS.gene053916 | MS.gene06752 | 0.858404 | 8.43E-63 | -1.69E-46 |
| MS.gene054003 | MS.gene06752 | 0.80523 | 1.48E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene06752 | 0.849547 | 3.02E-60 | -1.69E-46 |
| MS.gene054642 | MS.gene06752 | 0.802136 | 6.47E-49 | -1.69E-46 |
| MS.gene054706 | MS.gene06752 | -0.827492 | 1.52E-54 | -1.69E-46 |
| MS.gene05470 | MS.gene06752 | 0.840623 | 7.78E-58 | -1.69E-46 |
| MS.gene05494 | MS.gene06752 | 0.880474 | 5.33E-70 | -1.69E-46 |
| MS.gene054954 | MS.gene06752 | 0.852964 | 3.27E-61 | -1.69E-46 |
| MS.gene055224 | MS.gene06752 | 0.857107 | 2.04E-62 | -1.69E-46 |
| MS.gene055362 | MS.gene06752 | 0.82046 | 6.78E-53 | -1.69E-46 |
| MS.gene055502 | MS.gene06752 | 0.828324 | 9.58E-55 | -1.69E-46 |
| MS.gene055577 | MS.gene06752 | 0.844482 | 7.36E-59 | -1.69E-46 |
| MS.gene055722 | MS.gene06752 | 0.821313 | 4.31E-53 | -1.69E-46 |
| MS.gene055741 | MS.gene06752 | 0.817837 | 2.68E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene06752 | 0.80872 | 2.70E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene06752 | 0.8612 | 1.21E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene06752 | 0.876075 | 1.86E-68 | -1.69E-46 |
| MS.gene055751 | MS.gene06752 | 0.875262 | 3.54E-68 | -1.69E-46 |
| MS.gene055776 | MS.gene06752 | 0.866547 | 2.63E-65 | -1.69E-46 |
| MS.gene05589 | MS.gene06752 | 0.912653 | 1.52E-83 | -1.69E-46 |
| MS.gene055941 | MS.gene06752 | 0.806239 | 9.06E-50 | -1.69E-46 |
| MS.gene055942 | MS.gene06752 | -0.812833 | 3.47E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene06752 | 0.830835 | 2.35E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene06752 | 0.848845 | 4.73E-60 | -1.69E-46 |
| MS.gene056283 | MS.gene06752 | 0.825732 | 3.99E-54 | -1.69E-46 |
| MS.gene056387 | MS.gene06752 | 0.903189 | 4.49E-79 | -1.69E-46 |
| MS.gene056422 | MS.gene06752 | 0.837848 | 4.08E-57 | -1.69E-46 |
| MS.gene056446 | MS.gene06752 | 0.835764 | 1.39E-56 | -1.69E-46 |
| MS.gene056487 | MS.gene06752 | 0.817583 | 3.06E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene06752 | 0.913988 | 3.25E-84 | -1.69E-46 |
| MS.gene056510 | MS.gene06752 | 0.854064 | 1.58E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene06752 | 0.833261 | 5.90E-56 | -1.69E-46 |
| MS.gene056857 | MS.gene06752 | -0.807411 | 5.12E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene06752 | 0.823177 | 1.59E-53 | -1.69E-46 |
| MS.gene057019 | MS.gene06752 | 0.815168 | 1.06E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene06752 | 0.836002 | 1.21E-56 | -1.69E-46 |
| MS.gene057086 | MS.gene06752 | 0.892615 | 1.35E-74 | -1.69E-46 |
| MS.gene05753 | MS.gene06752 | 0.812286 | 4.58E-51 | -1.69E-46 |
| MS.gene057734 | MS.gene06752 | 0.824594 | 7.42E-54 | -1.69E-46 |
| MS.gene057857 | MS.gene06752 | 0.805048 | 1.61E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene06752 | 0.853994 | 1.65E-61 | -1.69E-46 |
| MS.gene058099 | MS.gene06752 | -0.814072 | 1.86E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene06752 | 0.812302 | 4.54E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene06752 | 0.813695 | 2.25E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene06752 | 0.826197 | 3.10E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene06752 | -0.835423 | 1.69E-56 | -1.69E-46 |
| MS.gene058173 | MS.gene06752 | -0.834276 | 3.29E-56 | -1.69E-46 |
| MS.gene058175 | MS.gene06752 | -0.842386 | 2.67E-58 | -1.69E-46 |
| MS.gene058268 | MS.gene06752 | -0.80223 | 6.19E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene06752 | -0.807176 | 5.74E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene06752 | 0.832025 | 1.20E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene06752 | 0.835646 | 1.49E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene06752 | 0.822494 | 2.30E-53 | -1.69E-46 |
| MS.gene058459 | MS.gene06752 | 0.824136 | 9.50E-54 | -1.69E-46 |
| MS.gene058723 | MS.gene06752 | 0.805131 | 1.55E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene06752 | 0.813725 | 2.21E-51 | -1.69E-46 |
| MS.gene058838 | MS.gene06752 | 0.845216 | 4.66E-59 | -1.69E-46 |
| MS.gene058978 | MS.gene06752 | -0.841744 | 3.95E-58 | -1.69E-46 |
| MS.gene059022 | MS.gene06752 | 0.839348 | 1.67E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene06752 | 0.836867 | 7.28E-57 | -1.69E-46 |
| MS.gene059037 | MS.gene06752 | -0.801735 | 7.83E-49 | -1.69E-46 |
| MS.gene059045 | MS.gene06752 | -0.828363 | 9.37E-55 | -1.69E-46 |
| MS.gene059129 | MS.gene06752 | 0.808573 | 2.90E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene06752 | 0.877876 | 4.42E-69 | -1.69E-46 |
| MS.gene059305 | MS.gene06752 | 0.841826 | 3.75E-58 | -1.69E-46 |
| MS.gene059367 | MS.gene06752 | 0.873325 | 1.60E-67 | -1.69E-46 |
| MS.gene059368 | MS.gene06752 | 0.818775 | 1.64E-52 | -1.69E-46 |
| MS.gene059517 | MS.gene06752 | 0.800221 | 1.60E-48 | -1.69E-46 |
| MS.gene059667 | MS.gene06752 | 0.889941 | 1.54E-73 | -1.69E-46 |
| MS.gene059677 | MS.gene06752 | 0.811092 | 8.32E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene06752 | 0.842954 | 1.89E-58 | -1.69E-46 |
| MS.gene059699 | MS.gene06752 | -0.809475 | 1.86E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene06752 | -0.824605 | 7.37E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene06752 | 0.812472 | 4.17E-51 | -1.69E-46 |
| MS.gene059837 | MS.gene06752 | 0.805983 | 1.03E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene06752 | 0.915179 | 8.00E-85 | -1.69E-46 |
| MS.gene06000 | MS.gene06752 | 0.880338 | 5.96E-70 | -1.69E-46 |
| MS.gene06027 | MS.gene06752 | 0.803334 | 3.66E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene06752 | 0.838832 | 2.27E-57 | -1.69E-46 |
| MS.gene060482 | MS.gene06752 | 0.837234 | 5.86E-57 | -1.69E-46 |
| MS.gene060593 | MS.gene06752 | -0.806628 | 7.50E-50 | -1.69E-46 |
| MS.gene060595 | MS.gene06752 | -0.818096 | 2.34E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene06752 | 0.818818 | 1.61E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene06752 | 0.857296 | 1.80E-62 | -1.69E-46 |
| MS.gene060778 | MS.gene06752 | 0.908968 | 9.56E-82 | -1.69E-46 |
| MS.gene06077 | MS.gene06752 | 0.848535 | 5.76E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene06752 | 0.834639 | 2.67E-56 | -1.69E-46 |
| MS.gene06097 | MS.gene06752 | 0.893059 | 8.94E-75 | -1.69E-46 |
| MS.gene060982 | MS.gene06752 | 0.908206 | 2.20E-81 | -1.69E-46 |
| MS.gene061044 | MS.gene06752 | -0.803432 | 3.50E-49 | -1.69E-46 |
| MS.gene061218 | MS.gene06752 | 0.865344 | 6.32E-65 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06752 | MS.gene47969 | PPI |
| MS.gene06752 | MS.gene27999 | PPI |
| MS.gene030874 | MS.gene06752 | PPI |
| MS.gene06752 | MS.gene57358 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06752.t1 | MTR_3g090900 | 98.249 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1030 |
| MS.gene06752.t1 | MTR_3g090900 | 97.351 | 453 | 12 | 0 | 1 | 453 | 1 | 453 | 0.0 | 902 |
| MS.gene06752.t1 | MTR_3g090900 | 97.514 | 362 | 9 | 0 | 1 | 362 | 1 | 362 | 0.0 | 724 |
| MS.gene06752.t1 | MTR_3g118290 | 28.819 | 288 | 200 | 3 | 229 | 514 | 287 | 571 | 3.57e-33 | 133 |
| MS.gene06752.t1 | MTR_7g101840 | 31.000 | 300 | 202 | 4 | 216 | 513 | 257 | 553 | 4.40e-32 | 130 |
| MS.gene06752.t1 | MTR_1g063850 | 28.819 | 288 | 200 | 3 | 216 | 501 | 261 | 545 | 1.53e-29 | 122 |
| MS.gene06752.t1 | MTR_0172s0030 | 30.565 | 301 | 181 | 10 | 222 | 505 | 204 | 493 | 1.91e-23 | 103 |
| MS.gene06752.t1 | MTR_3g033420 | 32.394 | 213 | 140 | 3 | 305 | 514 | 192 | 403 | 5.11e-19 | 89.7 |
| MS.gene06752.t1 | MTR_1g007370 | 25.954 | 262 | 180 | 6 | 256 | 513 | 296 | 547 | 7.86e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06752.t1 | AT5G24120 | 61.877 | 522 | 186 | 5 | 1 | 514 | 1 | 517 | 0.0 | 625 |
| MS.gene06752.t1 | AT5G24120 | 61.877 | 522 | 186 | 5 | 1 | 514 | 1 | 517 | 0.0 | 625 |
| MS.gene06752.t1 | AT5G24120 | 61.877 | 522 | 186 | 5 | 1 | 514 | 1 | 517 | 0.0 | 625 |
| MS.gene06752.t1 | AT2G36990 | 31.333 | 300 | 201 | 3 | 216 | 513 | 247 | 543 | 1.57e-35 | 139 |
| MS.gene06752.t1 | AT1G08540 | 30.903 | 288 | 194 | 3 | 229 | 514 | 285 | 569 | 3.72e-34 | 136 |
| MS.gene06752.t1 | AT5G13730 | 27.532 | 316 | 197 | 9 | 215 | 512 | 113 | 414 | 4.27e-21 | 95.9 |
| MS.gene06752.t1 | AT1G64860 | 28.094 | 299 | 191 | 8 | 222 | 505 | 202 | 491 | 1.14e-20 | 95.5 |
| MS.gene06752.t1 | AT1G64860 | 28.497 | 193 | 130 | 4 | 222 | 410 | 202 | 390 | 6.69e-16 | 80.9 |
| MS.gene06752.t1 | AT3G53920 | 25.614 | 285 | 196 | 7 | 237 | 513 | 293 | 569 | 3.15e-14 | 75.9 |
Find 111 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTACATCACGGTATCTTTC+AGG | 0.229998 | 3.3:+75826339 | None:intergenic |
| AGAAGATTGACGAACTTCTA+AGG | 0.267064 | 3.3:-75828371 | MS.gene06752:CDS |
| CCGTTAACGGTAGCATTTAA+AGG | 0.276378 | 3.3:-75828843 | MS.gene06752:CDS |
| AAGAGGATTTAAACAGTGAT+AGG | 0.297201 | 3.3:-75828521 | MS.gene06752:CDS |
| CCTTTAAATGCTACCGTTAA+CGG | 0.304115 | 3.3:+75828843 | None:intergenic |
| GAGACAGCTCTTGGTTTCTT+AGG | 0.309175 | 3.3:+75828714 | None:intergenic |
| TTGAGCCAAACCGGAGATTT+CGG | 0.320769 | 3.3:-75827054 | MS.gene06752:CDS |
| AATGAGCTTCTCACCTTCAT+TGG | 0.323733 | 3.3:+75828243 | None:intergenic |
| ATACTCAGTACCGGCTGATT+TGG | 0.341811 | 3.3:-75828346 | MS.gene06752:CDS |
| CTCATCAAGATTCATCCGTT+TGG | 0.343384 | 3.3:+75828473 | None:intergenic |
| GTAAATCATCTTTCACTTGA+AGG | 0.343761 | 3.3:+75827780 | None:intergenic |
| AGCTTCTCACGTGTTCCCTT+TGG | 0.354929 | 3.3:-75826971 | MS.gene06752:CDS |
| GTCTTGAATGCAGTGATAGA+AGG | 0.357509 | 3.3:+75826301 | None:intergenic |
| GTTGATGATGGTGGTGTTGA+TGG | 0.360239 | 3.3:-75826243 | MS.gene06752:CDS |
| CCTAGAGATGTTCAAGTTTG+AGG | 0.363298 | 3.3:+75825439 | None:intergenic |
| CTTTGTCAGGCTGGAGTTAA+GGG | 0.363815 | 3.3:-75827100 | MS.gene06752:CDS |
| TTTCAACCTACAGTCTGTTT+TGG | 0.364864 | 3.3:-75827030 | MS.gene06752:CDS |
| TCTTTGTCAGGCTGGAGTTA+AGG | 0.368656 | 3.3:-75827101 | MS.gene06752:CDS |
| TCCTCAGTGGAGACAGCTCT+TGG | 0.384406 | 3.3:+75828705 | None:intergenic |
| TGCAAGAAATAAGCTAATAA+AGG | 0.388641 | 3.3:-75827660 | MS.gene06752:intron |
| ATCAATGGGGTTGTTGATGA+TGG | 0.389488 | 3.3:-75826255 | MS.gene06752:CDS |
| TGCTCCGAAGAAGGCAGAAC+TGG | 0.403451 | 3.3:+75828291 | None:intergenic |
| ACCTCCAGTTCTGCCTTCTT+CGG | 0.405115 | 3.3:-75828295 | MS.gene06752:CDS |
| ATAATCTGCATCACATATAT+CGG | 0.410715 | 3.3:+75828602 | None:intergenic |
| CTTGAACATCTCTAGGGAAA+TGG | 0.415901 | 3.3:-75825432 | MS.gene06752:CDS |
| AGACAGAGGTTTGGACTTGA+TGG | 0.418320 | 3.3:-75825491 | MS.gene06752:CDS |
| CAGCCAAGACGCACAAGAAA+AGG | 0.419331 | 3.3:-75828758 | MS.gene06752:CDS |
| CCTCAAACTTGAACATCTCT+AGG | 0.422830 | 3.3:-75825439 | MS.gene06752:CDS |
| TCTATTATTTCTTCCTCCGT+TGG | 0.435604 | 3.3:+75826378 | None:intergenic |
| AATCTTCTCAATTCTACTCC+TGG | 0.438326 | 3.3:+75828386 | None:intergenic |
| GGTAAGGGTGACAGAACTTT+GGG | 0.439878 | 3.3:-75825470 | MS.gene06752:CDS |
| TTTCAAGATCTTTGTCAGGC+TGG | 0.460093 | 3.3:-75827109 | MS.gene06752:CDS |
| CGCAAGAAGAGTTTATCAAT+GGG | 0.461379 | 3.3:-75826269 | MS.gene06752:CDS |
| GAAAGCCGAAATCTCCGGTT+TGG | 0.463173 | 3.3:+75827049 | None:intergenic |
| TTGGTGATCAGACAGAGGTT+TGG | 0.464083 | 3.3:-75825500 | MS.gene06752:CDS |
| TGACAAAGATCTTGAAACCT+TGG | 0.467823 | 3.3:+75827115 | None:intergenic |
| CTGATCACCAAGTTCTCCTT+AGG | 0.468005 | 3.3:+75825512 | None:intergenic |
| GCTCAAGCATTCAGCTCGAT+TGG | 0.469057 | 3.3:-75825378 | MS.gene06752:CDS |
| AAGGTTTCAAGATCTTTGTC+AGG | 0.472724 | 3.3:-75827113 | MS.gene06752:CDS |
| TGGTAAGGGTGACAGAACTT+TGG | 0.477364 | 3.3:-75825471 | MS.gene06752:CDS |
| ATCTTCTCAATTCTACTCCT+GGG | 0.478589 | 3.3:+75828387 | None:intergenic |
| ATAACTCAATCTTAGCTCTT+CGG | 0.481173 | 3.3:+75826421 | None:intergenic |
| TCAAGTAAAGAAAGCAATAG+AGG | 0.482166 | 3.3:-75827693 | MS.gene06752:CDS |
| CATCACATATATCGGTTGTC+GGG | 0.482870 | 3.3:+75828610 | None:intergenic |
| TTACATCACGGTATCTTTCA+GGG | 0.483805 | 3.3:+75826340 | None:intergenic |
| TGTATTGAAGAGACCGTTAA+CGG | 0.487228 | 3.3:-75828856 | MS.gene06752:CDS |
| CTGATTTGGTCAGTCTAGAC+TGG | 0.488397 | 3.3:-75828332 | MS.gene06752:CDS |
| GCATCACATATATCGGTTGT+CGG | 0.491957 | 3.3:+75828609 | None:intergenic |
| TAATCCACATCCAATGAAGA+TGG | 0.497477 | 3.3:+75828675 | None:intergenic |
| TCTCGAAGGGGTAAGAAGAT+TGG | 0.504636 | 3.3:-75828555 | MS.gene06752:CDS |
| GAAGGCAACCTGCTCTACTA+AGG | 0.506636 | 3.3:-75826212 | MS.gene06752:CDS |
| AGAGCAAGCCTTAGTAGAGC+AGG | 0.510037 | 3.3:+75826204 | None:intergenic |
| GTTAACGGTCTCTTCAATAC+AGG | 0.512611 | 3.3:+75828858 | None:intergenic |
| ACGCAAGAAGAGTTTATCAA+TGG | 0.515058 | 3.3:-75826270 | MS.gene06752:CDS |
| TGAGAAGCTTGCGAGGGTCA+TGG | 0.515197 | 3.3:+75826985 | None:intergenic |
| AGATGATTTACAGAAGGAGC+TGG | 0.516579 | 3.3:-75827768 | MS.gene06752:CDS |
| GATTGGTGATGTAAGTAAAG+AGG | 0.522341 | 3.3:-75828538 | MS.gene06752:CDS |
| GAGGTTTGGACTTGATGGTA+AGG | 0.523710 | 3.3:-75825486 | MS.gene06752:CDS |
| CTGTTTCAAGCTCAGCTGCT+CGG | 0.525455 | 3.3:-75828920 | MS.gene06752:CDS |
| GACAAAGATCTTGAAACCTT+GGG | 0.527279 | 3.3:+75827116 | None:intergenic |
| GTAAAGAAAGCAATAGAGGT+TGG | 0.531566 | 3.3:-75827689 | MS.gene06752:CDS |
| TCTGAAGCCTAAGGAGAACT+TGG | 0.533811 | 3.3:-75825519 | MS.gene06752:CDS |
| TCTTGAATGCAGTGATAGAA+GGG | 0.536462 | 3.3:+75826302 | None:intergenic |
| GAAGATTGACGAACTTCTAA+GGG | 0.538367 | 3.3:-75828370 | MS.gene06752:CDS |
| GCTTGATTCTCTGAAGCCTA+AGG | 0.542662 | 3.3:-75825528 | MS.gene06752:CDS |
| CTCAAACTTGAACATCTCTA+GGG | 0.544621 | 3.3:-75825438 | MS.gene06752:CDS |
| AGTTATCATTTCAGCTTCAG+AGG | 0.545216 | 3.3:-75826404 | MS.gene06752:CDS |
| ACCAGAAAACAAAAGCCAAA+CGG | 0.546934 | 3.3:-75828488 | MS.gene06752:CDS |
| CAAGTTGATGCAACCAATGA+AGG | 0.548325 | 3.3:-75828256 | MS.gene06752:intron |
| GGAGCTGGAAAGAGAGCCTA+CGG | 0.552589 | 3.3:-75827753 | MS.gene06752:CDS |
| AAGATACCGTGATGTAATGA+AGG | 0.553790 | 3.3:-75826334 | MS.gene06752:CDS |
| TGTTCCCTTTGGACTTGAGT+CGG | 0.554834 | 3.3:-75826960 | MS.gene06752:intron |
| AATGGGGTTGTTGATGATGG+TGG | 0.565643 | 3.3:-75826252 | MS.gene06752:CDS |
| AGAGGATTTAAACAGTGATA+GGG | 0.568935 | 3.3:-75828520 | MS.gene06752:CDS |
| AGTGAAAGATGATTTACAGA+AGG | 0.573532 | 3.3:-75827774 | MS.gene06752:CDS |
| TCAGCTGCTCGGACTCCACT+AGG | 0.575229 | 3.3:-75828909 | MS.gene06752:CDS |
| CATACCGACTCAAGTCCAAA+GGG | 0.580195 | 3.3:+75826956 | None:intergenic |
| GGTGAGAAAGCACGAAGTCA+AGG | 0.585592 | 3.3:-75825411 | MS.gene06752:CDS |
| GAACACGTGAGAAGCTTGCG+AGG | 0.589931 | 3.3:+75826978 | None:intergenic |
| AGGTTGAAAGCCGAAATCTC+CGG | 0.593857 | 3.3:+75827044 | None:intergenic |
| GTGTTGATGGCGATAACAGA+AGG | 0.598234 | 3.3:-75826230 | MS.gene06752:CDS |
| GATCAAAAGAGTCTCTCGAA+GGG | 0.598531 | 3.3:-75828568 | MS.gene06752:CDS |
| AACTTTGTATTCAATCCTAG+TGG | 0.599283 | 3.3:+75828894 | None:intergenic |
| AGGTTTGGACTTGATGGTAA+GGG | 0.603110 | 3.3:-75825485 | MS.gene06752:CDS |
| TCAGCTATTTCATCCTCCGT+AGG | 0.604604 | 3.3:+75827737 | None:intergenic |
| TCTAAGGGAATACTCAGTAC+CGG | 0.605704 | 3.3:-75828355 | MS.gene06752:CDS |
| AGCTTGCGAGGGTCATGGAA+CGG | 0.606319 | 3.3:+75826990 | None:intergenic |
| ACATACCGACTCAAGTCCAA+AGG | 0.607252 | 3.3:+75826955 | None:intergenic |
| TTGATGCCTTCATTACATCA+CGG | 0.616848 | 3.3:+75826328 | None:intergenic |
| TACATCACGGTATCTTTCAG+GGG | 0.616885 | 3.3:+75826341 | None:intergenic |
| AACGGATGAATCTTGATGAG+AGG | 0.617893 | 3.3:-75828470 | MS.gene06752:CDS |
| ATTGATAAACTCTTCTTGCG+TGG | 0.621610 | 3.3:+75826272 | None:intergenic |
| AGATCAAAAGAGTCTCTCGA+AGG | 0.624213 | 3.3:-75828569 | MS.gene06752:CDS |
| TCTTATCCAAAACAGACTGT+AGG | 0.625554 | 3.3:+75827024 | None:intergenic |
| AAGGCTTGCTCTTGATGATG+TGG | 0.625750 | 3.3:-75826193 | MS.gene06752:intron |
| GTGAAGATGTCATTCCAACT+CGG | 0.626818 | 3.3:-75828422 | MS.gene06752:CDS |
| TAAACAGAATGACACAGCGT+TGG | 0.627600 | 3.3:-75828817 | MS.gene06752:CDS |
| CTTGAATGCAGTGATAGAAG+GGG | 0.628428 | 3.3:+75826303 | None:intergenic |
| TCCGAAGAAGGCAGAACTGG+AGG | 0.632944 | 3.3:+75828294 | None:intergenic |
| TCAGCTTCAGAGGTCACCAA+CGG | 0.634098 | 3.3:-75826394 | MS.gene06752:CDS |
| GGATTTAAACAGTGATAGGG+TGG | 0.634412 | 3.3:-75828517 | MS.gene06752:CDS |
| TGATCACGAACAAGACAAGC+CGG | 0.636977 | 3.3:+75827167 | None:intergenic |
| TCTAGACTGACCAAATCAGC+CGG | 0.641619 | 3.3:+75828336 | None:intergenic |
| ATCAAAAGAGTCTCTCGAAG+GGG | 0.655049 | 3.3:-75828567 | MS.gene06752:CDS |
| AACACGTGAGAAGCTTGCGA+GGG | 0.668557 | 3.3:+75826979 | None:intergenic |
| ACGGTCTCTTCAATACAGGA+TGG | 0.670415 | 3.3:+75828862 | None:intergenic |
| GCTTCAGAGGTCACCAACGG+AGG | 0.677471 | 3.3:-75826391 | MS.gene06752:CDS |
| AGAACTTGGTGATCAGACAG+AGG | 0.691541 | 3.3:-75825505 | MS.gene06752:CDS |
| GCAAGAAGAGTTTATCAATG+GGG | 0.710931 | 3.3:-75826268 | MS.gene06752:CDS |
| ACCAAGAGCTGTCTCCACTG+AGG | 0.712371 | 3.3:-75828706 | MS.gene06752:CDS |
| GCTGGAAAGAGAGCCTACGG+AGG | 0.718077 | 3.3:-75827750 | MS.gene06752:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTGTGAAATATCATT+AGG | - | chr3.3:75828275-75828294 | MS.gene06752:CDS | 15.0% |
| !! | CAATTTATTACAATACATAT+AGG | + | chr3.3:75827515-75827534 | None:intergenic | 15.0% |
| !! | TTACATCAATAATTAAGAAA+TGG | - | chr3.3:75827066-75827085 | MS.gene06752:CDS | 15.0% |
| !!! | TTTGTATATATTTTCAAGTA+TGG | + | chr3.3:75825650-75825669 | None:intergenic | 15.0% |
| !! | CAATGAAAATATTATTGGAT+CGG | + | chr3.3:75827693-75827712 | None:intergenic | 20.0% |
| !! | GACTTTGTAATCTTTAAATT+TGG | - | chr3.3:75827007-75827026 | MS.gene06752:CDS | 20.0% |
| !! | TGAAATTCATGCATATAATA+TGG | - | chr3.3:75826278-75826297 | MS.gene06752:CDS | 20.0% |
| !! | TTTATTACAATACATATAGG+TGG | + | chr3.3:75827512-75827531 | None:intergenic | 20.0% |
| !!! | AGATACATTTGTTAATTTTC+AGG | - | chr3.3:75826478-75826497 | MS.gene06752:intron | 20.0% |
| ! | AAAGTCATCAGAAATTTCAA+TGG | + | chr3.3:75826993-75827012 | None:intergenic | 25.0% |
| ! | AACAATATCACTAAAAAGAG+AGG | + | chr3.3:75827033-75827052 | None:intergenic | 25.0% |
| ! | ATAATCTGCATCACATATAT+CGG | + | chr3.3:75825686-75825705 | None:intergenic | 25.0% |
| ! | ATATGGTTTAATGAAACTGT+TGG | + | chr3.3:75828545-75828564 | None:intergenic | 25.0% |
| ! | ATGAACTTGATTGATTGATT+TGG | - | chr3.3:75827797-75827816 | MS.gene06752:intron | 25.0% |
| ! | CAACAATATTTCCAATATAG+TGG | - | chr3.3:75826406-75826425 | MS.gene06752:CDS | 25.0% |
| ! | CAGTTTCATTAAACCATATT+TGG | - | chr3.3:75828546-75828565 | MS.gene06752:CDS | 25.0% |
| ! | CATCAATAATTAAGAAATGG+TGG | - | chr3.3:75827069-75827088 | MS.gene06752:CDS | 25.0% |
| ! | TATTGGAAATATTGTTGACA+TGG | + | chr3.3:75826403-75826422 | None:intergenic | 25.0% |
| ! | TATTGTAAACAGTGTACATT+AGG | - | chr3.3:75828189-75828208 | MS.gene06752:intron | 25.0% |
| ! | TGCAAGAAATAAGCTAATAA+AGG | - | chr3.3:75826625-75826644 | MS.gene06752:intron | 25.0% |
| ! | TGGGATATTCAAAGAAAATA+TGG | - | chr3.3:75827748-75827767 | MS.gene06752:CDS | 25.0% |
| ! | TTGGCCAATGAAAATATTAT+TGG | + | chr3.3:75827698-75827717 | None:intergenic | 25.0% |
| !! | AAATTCGATTTGTGATACTT+CGG | - | chr3.3:75827549-75827568 | MS.gene06752:intron | 25.0% |
| !! | ACTAAACATTGTTTCTCTTA+AGG | - | chr3.3:75828385-75828404 | MS.gene06752:CDS | 25.0% |
| !! | ATATTTTCTTTGAATATCCC+AGG | + | chr3.3:75827749-75827768 | None:intergenic | 25.0% |
| !! | CGATCCAATAATATTTTCAT+TGG | - | chr3.3:75827691-75827710 | MS.gene06752:CDS | 25.0% |
| !! | GTTTTTAAATTGTGCGATTA+AGG | - | chr3.3:75828631-75828650 | MS.gene06752:CDS | 25.0% |
| !! | TATTTTCATTGGCCAATAAT+TGG | - | chr3.3:75827702-75827721 | MS.gene06752:CDS | 25.0% |
| !! | TGAACTTGATTGATTGATTT+GGG | - | chr3.3:75827798-75827817 | MS.gene06752:intron | 25.0% |
| !!! | CTCTTTTTAGTGATATTGTT+TGG | - | chr3.3:75827033-75827052 | MS.gene06752:CDS | 25.0% |
| AAAACAATAATCAGCATGTG+TGG | + | chr3.3:75827369-75827388 | None:intergenic | 30.0% | |
| AACATCATTGACCACTATAT+TGG | + | chr3.3:75826420-75826439 | None:intergenic | 30.0% | |
| AACTTTGTATTCAATCCTAG+TGG | + | chr3.3:75825394-75825413 | None:intergenic | 30.0% | |
| AAGAGGATTTAAACAGTGAT+AGG | - | chr3.3:75825764-75825783 | MS.gene06752:intron | 30.0% | |
| ACTACTATTGCTGTGAATAT+TGG | + | chr3.3:75826907-75826926 | None:intergenic | 30.0% | |
| ACTAGTTCACATCTAATGAT+TGG | + | chr3.3:75828613-75828632 | None:intergenic | 30.0% | |
| ACTATACAAGATTTAAGCCT+GGG | - | chr3.3:75827729-75827748 | MS.gene06752:CDS | 30.0% | |
| AGAGGATTTAAACAGTGATA+GGG | - | chr3.3:75825765-75825784 | MS.gene06752:intron | 30.0% | |
| AGTCAACTCAACTTATGATA+GGG | - | chr3.3:75826744-75826763 | MS.gene06752:intron | 30.0% | |
| AGTGAAAGATGATTTACAGA+AGG | - | chr3.3:75826511-75826530 | MS.gene06752:intron | 30.0% | |
| AGTGTACATTAGGTATTTGT+TGG | - | chr3.3:75828199-75828218 | MS.gene06752:intron | 30.0% | |
| AGTTGAGTTTACATGGTTAT+AGG | - | chr3.3:75826954-75826973 | MS.gene06752:intron | 30.0% | |
| ATATAGTGGTCAATGATGTT+AGG | - | chr3.3:75826420-75826439 | MS.gene06752:CDS | 30.0% | |
| ATCAAACATTAGTTGCTAAG+AGG | + | chr3.3:75828719-75828738 | None:intergenic | 30.0% | |
| ATCAGAAATTTCAATGGAAG+AGG | + | chr3.3:75826987-75827006 | None:intergenic | 30.0% | |
| ATCTAACTAATGAGTTCTTC+TGG | - | chr3.3:75826717-75826736 | MS.gene06752:intron | 30.0% | |
| CTAGTTCACATCTAATGATT+GGG | + | chr3.3:75828612-75828631 | None:intergenic | 30.0% | |
| CTATAAATCATGTCTCATCA+AGG | + | chr3.3:75828579-75828598 | None:intergenic | 30.0% | |
| CTATATCCTTCTAACTTTGA+TGG | - | chr3.3:75826867-75826886 | MS.gene06752:intron | 30.0% | |
| CTGCTATTAAGAATTTAAGG+CGG | - | chr3.3:75828514-75828533 | MS.gene06752:CDS | 30.0% | |
| GAGTAAATTGAAAGAAAGTG+TGG | + | chr3.3:75826088-75826107 | None:intergenic | 30.0% | |
| GATGTAAAAATAACTGCTGT+AGG | - | chr3.3:75827469-75827488 | MS.gene06752:intron | 30.0% | |
| GGACTGCTATTAAGAATTTA+AGG | - | chr3.3:75828511-75828530 | MS.gene06752:CDS | 30.0% | |
| GTAAATCATCTTTCACTTGA+AGG | + | chr3.3:75826508-75826527 | None:intergenic | 30.0% | |
| TAGTCAACTCAACTTATGAT+AGG | - | chr3.3:75826743-75826762 | MS.gene06752:intron | 30.0% | |
| TATATGCATGAATTTCAGCA+TGG | + | chr3.3:75826275-75826294 | None:intergenic | 30.0% | |
| TCAAACATTAGTTGCTAAGA+GGG | + | chr3.3:75828718-75828737 | None:intergenic | 30.0% | |
| TCAACTTATGATAGGGATTT+AGG | - | chr3.3:75826751-75826770 | MS.gene06752:intron | 30.0% | |
| TCAAGTAAAGAAAGCAATAG+AGG | - | chr3.3:75826592-75826611 | MS.gene06752:intron | 30.0% | |
| TGTATAGTCCTACCAATTAT+TGG | + | chr3.3:75827717-75827736 | None:intergenic | 30.0% | |
| ! | AATTCGATTTGTGATACTTC+GGG | - | chr3.3:75827550-75827569 | MS.gene06752:intron | 30.0% |
| ! | AGAGTATCTACAGTCATATT+TGG | - | chr3.3:75826828-75826847 | MS.gene06752:intron | 30.0% |
| ! | ATAACTCAATCTTAGCTCTT+CGG | + | chr3.3:75827867-75827886 | None:intergenic | 30.0% |
| ! | GGAAAATTTTCCATCTTCAT+TGG | - | chr3.3:75825600-75825619 | MS.gene06752:intron | 30.0% |
| ! | TGTTCAATTCTTTTACAGCT+TGG | - | chr3.3:75826658-75826677 | MS.gene06752:intron | 30.0% |
| !!! | GGTATCTTTTAATTTTGTGC+AGG | - | chr3.3:75827828-75827847 | MS.gene06752:intron | 30.0% |
| AAATCATGTCTCATCAAGGA+AGG | + | chr3.3:75828575-75828594 | None:intergenic | 35.0% | |
| AAGATACCGTGATGTAATGA+AGG | - | chr3.3:75827951-75827970 | MS.gene06752:intron | 35.0% | |
| AAGGTTTCAAGATCTTTGTC+AGG | - | chr3.3:75827172-75827191 | MS.gene06752:CDS | 35.0% | |
| AATCTTCTCAATTCTACTCC+TGG | + | chr3.3:75825902-75825921 | None:intergenic | 35.0% | |
| ACCAGAAAACAAAAGCCAAA+CGG | - | chr3.3:75825797-75825816 | MS.gene06752:intron | 35.0% | |
| ACCATGAAGTTGAGTTTACA+TGG | - | chr3.3:75826947-75826966 | MS.gene06752:intron | 35.0% | |
| ACCATGTAAACTCAACTTCA+TGG | + | chr3.3:75826951-75826970 | None:intergenic | 35.0% | |
| ACGCAAGAAGAGTTTATCAA+TGG | - | chr3.3:75828015-75828034 | MS.gene06752:intron | 35.0% | |
| AGAAGATTGACGAACTTCTA+AGG | - | chr3.3:75825914-75825933 | MS.gene06752:intron | 35.0% | |
| AGTCATATTTGGCGAATTCA+TGG | - | chr3.3:75826839-75826858 | MS.gene06752:intron | 35.0% | |
| AGTTATCATTTCAGCTTCAG+AGG | - | chr3.3:75827881-75827900 | MS.gene06752:intron | 35.0% | |
| ATCTTCTCAATTCTACTCCT+GGG | + | chr3.3:75825901-75825920 | None:intergenic | 35.0% | |
| ATTACATCACGGTATCTTTC+AGG | + | chr3.3:75827949-75827968 | None:intergenic | 35.0% | |
| ATTGATAAACTCTTCTTGCG+TGG | + | chr3.3:75828016-75828035 | None:intergenic | 35.0% | |
| CCTTTAAATGCTACCGTTAA+CGG | + | chr3.3:75825445-75825464 | None:intergenic | 35.0% | |
| CGCAAGAAGAGTTTATCAAT+GGG | - | chr3.3:75828016-75828035 | MS.gene06752:intron | 35.0% | |
| CTCAAACTTGAACATCTCTA+GGG | - | chr3.3:75828847-75828866 | MS.gene06752:CDS | 35.0% | |
| CTTGATAAGCAAGGAATTCA+AGG | - | chr3.3:75826368-75826387 | MS.gene06752:CDS | 35.0% | |
| GAAGATTGACGAACTTCTAA+GGG | - | chr3.3:75825915-75825934 | MS.gene06752:intron | 35.0% | |
| GACAAAGATCTTGAAACCTT+GGG | + | chr3.3:75827172-75827191 | None:intergenic | 35.0% | |
| GACTATACAAGATTTAAGCC+TGG | - | chr3.3:75827728-75827747 | MS.gene06752:CDS | 35.0% | |
| GATGTTGGAGTATGCAATTA+AGG | - | chr3.3:75828454-75828473 | MS.gene06752:CDS | 35.0% | |
| GCAAGAAGAGTTTATCAATG+GGG | - | chr3.3:75828017-75828036 | MS.gene06752:intron | 35.0% | |
| GTAAAGAAAGCAATAGAGGT+TGG | - | chr3.3:75826596-75826615 | MS.gene06752:intron | 35.0% | |
| GTCATATTTGGCGAATTCAT+GGG | - | chr3.3:75826840-75826859 | MS.gene06752:intron | 35.0% | |
| GTTTCTCCATCAAAGTTAGA+AGG | + | chr3.3:75826876-75826895 | None:intergenic | 35.0% | |
| TAATCCACATCCAATGAAGA+TGG | + | chr3.3:75825613-75825632 | None:intergenic | 35.0% | |
| TATCACGAGTTGCTAAAAGT+TGG | - | chr3.3:75828226-75828245 | MS.gene06752:intron | 35.0% | |
| TCAACGATATCATACTTCCA+TGG | - | chr3.3:75828684-75828703 | MS.gene06752:CDS | 35.0% | |
| TCATATTTGGCGAATTCATG+GGG | - | chr3.3:75826841-75826860 | MS.gene06752:intron | 35.0% | |
| TCTTATCCAAAACAGACTGT+AGG | + | chr3.3:75827264-75827283 | None:intergenic | 35.0% | |
| TCTTGAATGCAGTGATAGAA+GGG | + | chr3.3:75827986-75828005 | None:intergenic | 35.0% | |
| TGACAAAGATCTTGAAACCT+TGG | + | chr3.3:75827173-75827192 | None:intergenic | 35.0% | |
| TGACTGTAGATACTCTATTG+AGG | + | chr3.3:75826824-75826843 | None:intergenic | 35.0% | |
| TGTATTGAAGAGACCGTTAA+CGG | - | chr3.3:75825429-75825448 | MS.gene06752:CDS | 35.0% | |
| TTACATCACGGTATCTTTCA+GGG | + | chr3.3:75827948-75827967 | None:intergenic | 35.0% | |
| TTCAACCTAATGGCTTAAGT+TGG | - | chr3.3:75826154-75826173 | MS.gene06752:intron | 35.0% | |
| TTCATTGGCCAATAATTGGT+AGG | - | chr3.3:75827706-75827725 | MS.gene06752:CDS | 35.0% | |
| TTGAAGGACGAATAAAGCAA+AGG | - | chr3.3:75826240-75826259 | MS.gene06752:CDS | 35.0% | |
| TTGATGCCTTCATTACATCA+CGG | + | chr3.3:75827960-75827979 | None:intergenic | 35.0% | |
| TTTCTTCGCTAGAAATAGCA+GGG | - | chr3.3:75827578-75827597 | MS.gene06752:intron | 35.0% | |
| ! | AGATGGAAAATTTTCCTCAG+TGG | + | chr3.3:75825596-75825615 | None:intergenic | 35.0% |
| ! | GTTGTCGTAAACAGTTTTCT+CGG | + | chr3.3:75827441-75827460 | None:intergenic | 35.0% |
| ! | TCTATTATTTCTTCCTCCGT+TGG | + | chr3.3:75827910-75827929 | None:intergenic | 35.0% |
| ! | TTGTCGTAAACAGTTTTCTC+GGG | + | chr3.3:75827440-75827459 | None:intergenic | 35.0% |
| ! | TTTCAACCTACAGTCTGTTT+TGG | - | chr3.3:75827255-75827274 | MS.gene06752:intron | 35.0% |
| ! | TTTTCCATCTTCATTGGATG+TGG | - | chr3.3:75825606-75825625 | MS.gene06752:intron | 35.0% |
| !! | GATTGGTGATGTAAGTAAAG+AGG | - | chr3.3:75825747-75825766 | MS.gene06752:intron | 35.0% |
| !!! | GGATTTCTTTTTTTCCGAGT+TGG | + | chr3.3:75825880-75825899 | None:intergenic | 35.0% |
| !!! | TGGCTTTTGTTTTCTGGTTT+CGG | + | chr3.3:75825795-75825814 | None:intergenic | 35.0% |
| AAAAATGCATGCTCCGAAGA+AGG | + | chr3.3:75826006-75826025 | None:intergenic | 40.0% | |
| AACACACACAATGACGATGT+TGG | - | chr3.3:75828439-75828458 | MS.gene06752:CDS | 40.0% | |
| AACATCGTCATTGTGTGTGT+TGG | + | chr3.3:75828440-75828459 | None:intergenic | 40.0% | |
| AACGGATGAATCTTGATGAG+AGG | - | chr3.3:75825815-75825834 | MS.gene06752:intron | 40.0% | |
| AATGAGCTTCTCACCTTCAT+TGG | + | chr3.3:75826045-75826064 | None:intergenic | 40.0% | |
| ACATCGTCATTGTGTGTGTT+GGG | + | chr3.3:75828439-75828458 | None:intergenic | 40.0% | |
| ACTTGCCAACTTAAGCCATT+AGG | + | chr3.3:75826162-75826181 | None:intergenic | 40.0% | |
| ACTTTGATGGAGAAACTCGA+TGG | - | chr3.3:75826880-75826899 | MS.gene06752:intron | 40.0% | |
| AGATCAAAAGAGTCTCTCGA+AGG | - | chr3.3:75825716-75825735 | MS.gene06752:intron | 40.0% | |
| AGATGATTTACAGAAGGAGC+TGG | - | chr3.3:75826517-75826536 | MS.gene06752:intron | 40.0% | |
| ATCAAAAGAGTCTCTCGAAG+GGG | - | chr3.3:75825718-75825737 | MS.gene06752:intron | 40.0% | |
| CAAGTAGCTGAGACTGAAAA+TGG | + | chr3.3:75827644-75827663 | None:intergenic | 40.0% | |
| CCGTTAACGGTAGCATTTAA+AGG | - | chr3.3:75825442-75825461 | MS.gene06752:CDS | 40.0% | |
| CCTCAAACTTGAACATCTCT+AGG | - | chr3.3:75828846-75828865 | MS.gene06752:CDS | 40.0% | |
| CTCATCAAGATTCATCCGTT+TGG | + | chr3.3:75825815-75825834 | None:intergenic | 40.0% | |
| CTCGGAAAAAAAGAAATCCC+AGG | - | chr3.3:75825881-75825900 | MS.gene06752:intron | 40.0% | |
| CTTGAATGCAGTGATAGAAG+GGG | + | chr3.3:75827985-75828004 | None:intergenic | 40.0% | |
| CTTTCTTCGCTAGAAATAGC+AGG | - | chr3.3:75827577-75827596 | MS.gene06752:intron | 40.0% | |
| GATCAAAAGAGTCTCTCGAA+GGG | - | chr3.3:75825717-75825736 | MS.gene06752:intron | 40.0% | |
| GCAAGAAGCTTTCAACCTAA+TGG | - | chr3.3:75826144-75826163 | MS.gene06752:intron | 40.0% | |
| GGATTTAAACAGTGATAGGG+TGG | - | chr3.3:75825768-75825787 | MS.gene06752:intron | 40.0% | |
| GTCTTGAATGCAGTGATAGA+AGG | + | chr3.3:75827987-75828006 | None:intergenic | 40.0% | |
| GTGAAGATGTCATTCCAACT+CGG | - | chr3.3:75825863-75825882 | MS.gene06752:intron | 40.0% | |
| GTTAACGGTCTCTTCAATAC+AGG | + | chr3.3:75825430-75825449 | None:intergenic | 40.0% | |
| GTTGGAGTATGCAATTAAGG+CGG | - | chr3.3:75828457-75828476 | MS.gene06752:CDS | 40.0% | |
| TAAACAGAATGACACAGCGT+TGG | - | chr3.3:75825468-75825487 | MS.gene06752:CDS | 40.0% | |
| TACATCACGGTATCTTTCAG+GGG | + | chr3.3:75827947-75827966 | None:intergenic | 40.0% | |
| TCAAGGAAGGACACCAAATA+TGG | + | chr3.3:75828562-75828581 | None:intergenic | 40.0% | |
| TCAGTCTCAGCTACTTGTAA+GGG | - | chr3.3:75827647-75827666 | MS.gene06752:intron | 40.0% | |
| TCATTACACTTGCTCGAACT+TGG | + | chr3.3:75828349-75828368 | None:intergenic | 40.0% | |
| TCTAAGGGAATACTCAGTAC+CGG | - | chr3.3:75825930-75825949 | MS.gene06752:intron | 40.0% | |
| TTCAGTCTCAGCTACTTGTA+AGG | - | chr3.3:75827646-75827665 | MS.gene06752:intron | 40.0% | |
| TTTCAAGATCTTTGTCAGGC+TGG | - | chr3.3:75827176-75827195 | MS.gene06752:CDS | 40.0% | |
| TTTCATGTTAACTCCCTCTG+AGG | - | chr3.3:75826210-75826229 | MS.gene06752:CDS | 40.0% | |
| ! | AGGGATTTAGGACTGAGTAA+CGG | - | chr3.3:75826763-75826782 | MS.gene06752:intron | 40.0% |
| ! | AGGTTTGGACTTGATGGTAA+GGG | - | chr3.3:75828800-75828819 | MS.gene06752:CDS | 40.0% |
| ! | ATCAATGGGGTTGTTGATGA+TGG | - | chr3.3:75828030-75828049 | MS.gene06752:intron | 40.0% |
| ! | ATCTTTTGCAGCACAATCTC+CGG | - | chr3.3:75827099-75827118 | MS.gene06752:CDS | 40.0% |
| ! | CAGATTTTGCTAATAGCCCA+AGG | - | chr3.3:75827153-75827172 | MS.gene06752:CDS | 40.0% |
| ! | CATCACATATATCGGTTGTC+GGG | + | chr3.3:75825678-75825697 | None:intergenic | 40.0% |
| ! | CCTAGAGATGTTCAAGTTTG+AGG | + | chr3.3:75828849-75828868 | None:intergenic | 40.0% |
| ! | CTTGAACATCTCTAGGGAAA+TGG | - | chr3.3:75828853-75828872 | MS.gene06752:CDS | 40.0% |
| ! | GCATCACATATATCGGTTGT+CGG | + | chr3.3:75825679-75825698 | None:intergenic | 40.0% |
| ! | TATCCTTTTCTTGTGCGTCT+TGG | + | chr3.3:75825533-75825552 | None:intergenic | 40.0% |
| !! | CAAGTTGATGCAACCAATGA+AGG | - | chr3.3:75826029-75826048 | MS.gene06752:intron | 40.0% |
| !! | CTGAGTAACGGTCATTTTCA+TGG | - | chr3.3:75826775-75826794 | MS.gene06752:intron | 40.0% |
| !! | TGCTCTTGATGATGTGGTAA+TGG | - | chr3.3:75828098-75828117 | MS.gene06752:intron | 40.0% |
| !! | TTGATCGTTTTGAGCCAAAC+CGG | - | chr3.3:75827222-75827241 | MS.gene06752:intron | 40.0% |
| !! | TTGATTGATTTGGGTGTGTC+TGG | - | chr3.3:75827807-75827826 | MS.gene06752:intron | 40.0% |
| !!! | TCCGTTTGGCTTTTGTTTTC+TGG | + | chr3.3:75825801-75825820 | None:intergenic | 40.0% |
| !!! | TTGGCTGTTTTAACTTGCGT+AGG | + | chr3.3:75825514-75825533 | None:intergenic | 40.0% |
| ACGGTCTCTTCAATACAGGA+TGG | + | chr3.3:75825426-75825445 | None:intergenic | 45.0% | |
| AGACAGAGGTTTGGACTTGA+TGG | - | chr3.3:75828794-75828813 | MS.gene06752:CDS | 45.0% | |
| AGGTTGAAAGCCGAAATCTC+CGG | + | chr3.3:75827244-75827263 | None:intergenic | 45.0% | |
| ATGCAATTAAGGCGGCCTAA+AGG | - | chr3.3:75828465-75828484 | MS.gene06752:CDS | 45.0% | |
| CTAAGAGGGACAAATGACCA+TGG | + | chr3.3:75828704-75828723 | None:intergenic | 45.0% | |
| CTGATCACCAAGTTCTCCTT+AGG | + | chr3.3:75828776-75828795 | None:intergenic | 45.0% | |
| CTTTGTCAGGCTGGAGTTAA+GGG | - | chr3.3:75827185-75827204 | MS.gene06752:intron | 45.0% | |
| GAGACAGCTCTTGGTTTCTT+AGG | + | chr3.3:75825574-75825593 | None:intergenic | 45.0% | |
| GGTAAGGGTGACAGAACTTT+GGG | - | chr3.3:75828815-75828834 | MS.gene06752:CDS | 45.0% | |
| TCTAGACTGACCAAATCAGC+CGG | + | chr3.3:75825952-75825971 | None:intergenic | 45.0% | |
| TCTCGAAGGGGTAAGAAGAT+TGG | - | chr3.3:75825730-75825749 | MS.gene06752:intron | 45.0% | |
| TCTTTGTCAGGCTGGAGTTA+AGG | - | chr3.3:75827184-75827203 | MS.gene06752:intron | 45.0% | |
| TGATCACGAACAAGACAAGC+CGG | + | chr3.3:75827121-75827140 | None:intergenic | 45.0% | |
| TGGTAAGGGTGACAGAACTT+TGG | - | chr3.3:75828814-75828833 | MS.gene06752:CDS | 45.0% | |
| TGTTCCCTTTGGACTTGAGT+CGG | - | chr3.3:75827325-75827344 | MS.gene06752:intron | 45.0% | |
| TTCCAGCGACTTGATAAGCA+AGG | - | chr3.3:75826359-75826378 | MS.gene06752:CDS | 45.0% | |
| TTCCTTGCTTATCAAGTCGC+TGG | + | chr3.3:75826364-75826383 | None:intergenic | 45.0% | |
| TTGAGCCAAACCGGAGATTT+CGG | - | chr3.3:75827231-75827250 | MS.gene06752:intron | 45.0% | |
| ! | AGAACTTGGTGATCAGACAG+AGG | - | chr3.3:75828780-75828799 | MS.gene06752:CDS | 45.0% |
| ! | CTTCAAGTTCAGACCTCAGA+GGG | + | chr3.3:75826226-75826245 | None:intergenic | 45.0% |
| ! | GAGGTTTGGACTTGATGGTA+AGG | - | chr3.3:75828799-75828818 | MS.gene06752:CDS | 45.0% |
| ! | TCAGCTATTTCATCCTCCGT+AGG | + | chr3.3:75826551-75826570 | None:intergenic | 45.0% |
| ! | TCTGAAGCCTAAGGAGAACT+TGG | - | chr3.3:75828766-75828785 | MS.gene06752:CDS | 45.0% |
| ! | TTGGTGATCAGACAGAGGTT+TGG | - | chr3.3:75828785-75828804 | MS.gene06752:CDS | 45.0% |
| !! | AAGGCTTGCTCTTGATGATG+TGG | - | chr3.3:75828092-75828111 | MS.gene06752:intron | 45.0% |
| !! | AATGGGGTTGTTGATGATGG+TGG | - | chr3.3:75828033-75828052 | MS.gene06752:intron | 45.0% |
| !! | ACATACCGACTCAAGTCCAA+AGG | + | chr3.3:75827333-75827352 | None:intergenic | 45.0% |
| !! | ATACTCAGTACCGGCTGATT+TGG | - | chr3.3:75825939-75825958 | MS.gene06752:intron | 45.0% |
| !! | CATACCGACTCAAGTCCAAA+GGG | + | chr3.3:75827332-75827351 | None:intergenic | 45.0% |
| !! | CTGATTTGGTCAGTCTAGAC+TGG | - | chr3.3:75825953-75825972 | MS.gene06752:intron | 45.0% |
| !! | GCTTGATTCTCTGAAGCCTA+AGG | - | chr3.3:75828757-75828776 | MS.gene06752:CDS | 45.0% |
| !! | GTGTTGATGGCGATAACAGA+AGG | - | chr3.3:75828055-75828074 | MS.gene06752:intron | 45.0% |
| !! | GTTGATGATGGTGGTGTTGA+TGG | - | chr3.3:75828042-75828061 | MS.gene06752:intron | 45.0% |
| !! | TGGCTTAAGTTGGCAAGTCA+AGG | - | chr3.3:75826164-75826183 | MS.gene06752:intron | 45.0% |
| AACACGTGAGAAGCTTGCGA+GGG | + | chr3.3:75827309-75827328 | None:intergenic | 50.0% | |
| ACCTCCAGTTCTGCCTTCTT+CGG | - | chr3.3:75825990-75826009 | MS.gene06752:intron | 50.0% | |
| AGAGCAAGCCTTAGTAGAGC+AGG | + | chr3.3:75828084-75828103 | None:intergenic | 50.0% | |
| AGCTTCTCACGTGTTCCCTT+TGG | - | chr3.3:75827314-75827333 | MS.gene06752:intron | 50.0% | |
| CAGCCAAGACGCACAAGAAA+AGG | - | chr3.3:75825527-75825546 | MS.gene06752:CDS | 50.0% | |
| CTGTTTCAAGCTCAGCTGCT+CGG | - | chr3.3:75825365-75825384 | MS.gene06752:CDS | 50.0% | |
| GAAAGCCGAAATCTCCGGTT+TGG | + | chr3.3:75827239-75827258 | None:intergenic | 50.0% | |
| GAAGGCAACCTGCTCTACTA+AGG | - | chr3.3:75828073-75828092 | MS.gene06752:intron | 50.0% | |
| GCTCAAGCATTCAGCTCGAT+TGG | - | chr3.3:75828907-75828926 | MS.gene06752:CDS | 50.0% | |
| GTCATTGTGTGTGTTGGGTG+TGG | + | chr3.3:75828434-75828453 | None:intergenic | 50.0% | |
| TCAGCTTCAGAGGTCACCAA+CGG | - | chr3.3:75827891-75827910 | MS.gene06752:intron | 50.0% | |
| ! | CCTTCAAGTTCAGACCTCAG+AGG | + | chr3.3:75826227-75826246 | None:intergenic | 50.0% |
| ! | GGTGAGAAAGCACGAAGTCA+AGG | - | chr3.3:75828874-75828893 | MS.gene06752:CDS | 50.0% |
| !! | CCTCTGAGGTCTGAACTTGA+AGG | - | chr3.3:75826224-75826243 | MS.gene06752:CDS | 50.0% |
| ACCAAGAGCTGTCTCCACTG+AGG | - | chr3.3:75825579-75825598 | MS.gene06752:intron | 55.0% | |
| AGCTTGCGAGGGTCATGGAA+CGG | + | chr3.3:75827298-75827317 | None:intergenic | 55.0% | |
| CAGCCTTAGCTGAGGCCTTT+AGG | + | chr3.3:75828483-75828502 | None:intergenic | 55.0% | |
| GAACACGTGAGAAGCTTGCG+AGG | + | chr3.3:75827310-75827329 | None:intergenic | 55.0% | |
| GGAGCTGGAAAGAGAGCCTA+CGG | - | chr3.3:75826532-75826551 | MS.gene06752:intron | 55.0% | |
| TCCGAAGAAGGCAGAACTGG+AGG | + | chr3.3:75825994-75826013 | None:intergenic | 55.0% | |
| TCCTCAGTGGAGACAGCTCT+TGG | + | chr3.3:75825583-75825602 | None:intergenic | 55.0% | |
| TGAGAAGCTTGCGAGGGTCA+TGG | + | chr3.3:75827303-75827322 | None:intergenic | 55.0% | |
| TGCTCCGAAGAAGGCAGAAC+TGG | + | chr3.3:75825997-75826016 | None:intergenic | 55.0% | |
| ACCCCAAGCAGCCTTAGCTG+AGG | + | chr3.3:75828491-75828510 | None:intergenic | 60.0% | |
| AGGCCTCAGCTAAGGCTGCT+TGG | - | chr3.3:75828485-75828504 | MS.gene06752:CDS | 60.0% | |
| CGGCCTAAAGGCCTCAGCTA+AGG | - | chr3.3:75828477-75828496 | MS.gene06752:CDS | 60.0% | |
| GCCTCAGCTAAGGCTGCTTG+GGG | - | chr3.3:75828487-75828506 | MS.gene06752:CDS | 60.0% | |
| GCTGGAAAGAGAGCCTACGG+AGG | - | chr3.3:75826535-75826554 | MS.gene06752:intron | 60.0% | |
| GCTTCAGAGGTCACCAACGG+AGG | - | chr3.3:75827894-75827913 | MS.gene06752:intron | 60.0% | |
| GGCCTCAGCTAAGGCTGCTT+GGG | - | chr3.3:75828486-75828505 | MS.gene06752:CDS | 60.0% | |
| TCAGCTAAGGCTGCTTGGGG+TGG | - | chr3.3:75828490-75828509 | MS.gene06752:CDS | 60.0% | |
| TCAGCTGCTCGGACTCCACT+AGG | - | chr3.3:75825376-75825395 | MS.gene06752:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 75825352 | 75828955 | 75825352 | ID=MS.gene06752 |
| chr3.3 | mRNA | 75825352 | 75828955 | 75825352 | ID=MS.gene06752.t1;Parent=MS.gene06752 |
| chr3.3 | exon | 75828257 | 75828955 | 75828257 | ID=MS.gene06752.t1.exon1;Parent=MS.gene06752.t1 |
| chr3.3 | CDS | 75828257 | 75828955 | 75828257 | ID=cds.MS.gene06752.t1;Parent=MS.gene06752.t1 |
| chr3.3 | exon | 75827661 | 75827807 | 75827661 | ID=MS.gene06752.t1.exon2;Parent=MS.gene06752.t1 |
| chr3.3 | CDS | 75827661 | 75827807 | 75827661 | ID=cds.MS.gene06752.t1;Parent=MS.gene06752.t1 |
| chr3.3 | exon | 75826961 | 75827197 | 75826961 | ID=MS.gene06752.t1.exon3;Parent=MS.gene06752.t1 |
| chr3.3 | CDS | 75826961 | 75827197 | 75826961 | ID=cds.MS.gene06752.t1;Parent=MS.gene06752.t1 |
| chr3.3 | exon | 75826194 | 75826457 | 75826194 | ID=MS.gene06752.t1.exon4;Parent=MS.gene06752.t1 |
| chr3.3 | CDS | 75826194 | 75826457 | 75826194 | ID=cds.MS.gene06752.t1;Parent=MS.gene06752.t1 |
| chr3.3 | exon | 75825352 | 75825549 | 75825352 | ID=MS.gene06752.t1.exon5;Parent=MS.gene06752.t1 |
| chr3.3 | CDS | 75825352 | 75825549 | 75825352 | ID=cds.MS.gene06752.t1;Parent=MS.gene06752.t1 |
| Gene Sequence |
| Protein sequence |
