Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71651.t1 | KEH44063.1 | 97.7 | 523 | 10 | 1 | 1 | 521 | 1 | 523 | 6.00E-303 | 1049.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71651.t1 | A0A072VRJ7 | 97.7 | 523 | 10 | 1 | 1 | 521 | 1 | 523 | 4.3e-303 | 1049.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene71651 | 0.864262 | 1.38E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene71651 | 0.802589 | 5.22E-49 | -1.69E-46 |
| MS.gene049222 | MS.gene71651 | 0.864905 | 8.68E-65 | -1.69E-46 |
| MS.gene049232 | MS.gene71651 | 0.914736 | 1.35E-84 | -1.69E-46 |
| MS.gene049285 | MS.gene71651 | 0.862099 | 6.44E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene71651 | 0.878338 | 3.05E-69 | -1.69E-46 |
| MS.gene049396 | MS.gene71651 | 0.881511 | 2.26E-70 | -1.69E-46 |
| MS.gene049552 | MS.gene71651 | 0.8265 | 2.62E-54 | -1.69E-46 |
| MS.gene049600 | MS.gene71651 | 0.851258 | 9.98E-61 | -1.69E-46 |
| MS.gene049609 | MS.gene71651 | 0.855423 | 6.37E-62 | -1.69E-46 |
| MS.gene049633 | MS.gene71651 | 0.855234 | 7.23E-62 | -1.69E-46 |
| MS.gene049656 | MS.gene71651 | 0.829223 | 5.80E-55 | -1.69E-46 |
| MS.gene049657 | MS.gene71651 | 0.83114 | 1.98E-55 | -1.69E-46 |
| MS.gene049865 | MS.gene71651 | 0.824715 | 6.95E-54 | -1.69E-46 |
| MS.gene05010 | MS.gene71651 | 0.896395 | 3.84E-76 | -1.69E-46 |
| MS.gene050165 | MS.gene71651 | 0.801902 | 7.23E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene71651 | 0.914586 | 1.61E-84 | -1.69E-46 |
| MS.gene050216 | MS.gene71651 | 0.854009 | 1.64E-61 | -1.69E-46 |
| MS.gene050323 | MS.gene71651 | 0.916495 | 1.66E-85 | -1.69E-46 |
| MS.gene050333 | MS.gene71651 | 0.810146 | 1.33E-50 | -1.69E-46 |
| MS.gene050381 | MS.gene71651 | -0.812509 | 4.09E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene71651 | 0.904505 | 1.14E-79 | -1.69E-46 |
| MS.gene050502 | MS.gene71651 | 0.920497 | 1.19E-87 | -1.69E-46 |
| MS.gene050504 | MS.gene71651 | 0.874605 | 5.93E-68 | -1.69E-46 |
| MS.gene050518 | MS.gene71651 | 0.864953 | 8.39E-65 | -1.69E-46 |
| MS.gene050577 | MS.gene71651 | 0.875561 | 2.80E-68 | -1.69E-46 |
| MS.gene050593 | MS.gene71651 | 0.805115 | 1.56E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene71651 | 0.869683 | 2.58E-66 | -1.69E-46 |
| MS.gene050662 | MS.gene71651 | 0.829383 | 5.31E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene71651 | 0.849302 | 3.53E-60 | -1.69E-46 |
| MS.gene050686 | MS.gene71651 | 0.803344 | 3.65E-49 | -1.69E-46 |
| MS.gene050697 | MS.gene71651 | 0.871477 | 6.64E-67 | -1.69E-46 |
| MS.gene050699 | MS.gene71651 | 0.84678 | 1.75E-59 | -1.69E-46 |
| MS.gene050747 | MS.gene71651 | 0.856544 | 2.99E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene71651 | 0.887126 | 1.88E-72 | -1.69E-46 |
| MS.gene05080 | MS.gene71651 | 0.875336 | 3.34E-68 | -1.69E-46 |
| MS.gene050868 | MS.gene71651 | 0.888346 | 6.41E-73 | -1.69E-46 |
| MS.gene050871 | MS.gene71651 | 0.889367 | 2.58E-73 | -1.69E-46 |
| MS.gene050876 | MS.gene71651 | 0.814442 | 1.54E-51 | -1.69E-46 |
| MS.gene050883 | MS.gene71651 | -0.804291 | 2.32E-49 | -1.69E-46 |
| MS.gene050904 | MS.gene71651 | 0.836997 | 6.74E-57 | -1.69E-46 |
| MS.gene050950 | MS.gene71651 | 0.851069 | 1.13E-60 | -1.69E-46 |
| MS.gene050986 | MS.gene71651 | 0.870985 | 9.64E-67 | -1.69E-46 |
| MS.gene05118 | MS.gene71651 | 0.842335 | 2.75E-58 | -1.69E-46 |
| MS.gene051268 | MS.gene71651 | 0.857022 | 2.17E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene71651 | 0.826397 | 2.77E-54 | -1.69E-46 |
| MS.gene051509 | MS.gene71651 | 0.877707 | 5.06E-69 | -1.69E-46 |
| MS.gene051551 | MS.gene71651 | 0.858238 | 9.45E-63 | -1.69E-46 |
| MS.gene051560 | MS.gene71651 | 0.815874 | 7.39E-52 | -1.69E-46 |
| MS.gene051651 | MS.gene71651 | -0.806182 | 9.31E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene71651 | 0.833695 | 4.60E-56 | -1.69E-46 |
| MS.gene051874 | MS.gene71651 | 0.817736 | 2.83E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene71651 | 0.832544 | 8.90E-56 | -1.69E-46 |
| MS.gene052066 | MS.gene71651 | 0.873203 | 1.76E-67 | -1.69E-46 |
| MS.gene052164 | MS.gene71651 | 0.892619 | 1.34E-74 | -1.69E-46 |
| MS.gene052346 | MS.gene71651 | 0.818928 | 1.52E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene71651 | 0.891652 | 3.27E-74 | -1.69E-46 |
| MS.gene052486 | MS.gene71651 | 0.887334 | 1.56E-72 | -1.69E-46 |
| MS.gene052503 | MS.gene71651 | 0.873233 | 1.72E-67 | -1.69E-46 |
| MS.gene052504 | MS.gene71651 | 0.851424 | 8.96E-61 | -1.69E-46 |
| MS.gene052506 | MS.gene71651 | 0.872084 | 4.17E-67 | -1.69E-46 |
| MS.gene052615 | MS.gene71651 | 0.812188 | 4.81E-51 | -1.69E-46 |
| MS.gene052822 | MS.gene71651 | 0.881987 | 1.52E-70 | -1.69E-46 |
| MS.gene052823 | MS.gene71651 | 0.8745 | 6.44E-68 | -1.69E-46 |
| MS.gene052825 | MS.gene71651 | 0.861592 | 9.21E-64 | -1.69E-46 |
| MS.gene052916 | MS.gene71651 | 0.838335 | 3.06E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene71651 | 0.866237 | 3.30E-65 | -1.69E-46 |
| MS.gene052986 | MS.gene71651 | 0.803258 | 3.80E-49 | -1.69E-46 |
| MS.gene052987 | MS.gene71651 | 0.811129 | 8.17E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene71651 | 0.803481 | 3.42E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene71651 | 0.867785 | 1.06E-65 | -1.69E-46 |
| MS.gene053213 | MS.gene71651 | 0.862291 | 5.63E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene71651 | 0.864939 | 8.47E-65 | -1.69E-46 |
| MS.gene053420 | MS.gene71651 | -0.813913 | 2.01E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene71651 | 0.884282 | 2.19E-71 | -1.69E-46 |
| MS.gene053479 | MS.gene71651 | 0.829592 | 4.72E-55 | -1.69E-46 |
| MS.gene053480 | MS.gene71651 | 0.833179 | 6.19E-56 | -1.69E-46 |
| MS.gene053505 | MS.gene71651 | 0.821693 | 3.53E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene71651 | 0.913175 | 8.34E-84 | -1.69E-46 |
| MS.gene053626 | MS.gene71651 | 0.892933 | 1.00E-74 | -1.69E-46 |
| MS.gene053632 | MS.gene71651 | 0.805587 | 1.24E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene71651 | 0.850889 | 1.27E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene71651 | 0.862119 | 6.35E-64 | -1.69E-46 |
| MS.gene053916 | MS.gene71651 | 0.857406 | 1.67E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene71651 | 0.836219 | 1.06E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene71651 | 0.831208 | 1.90E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene71651 | 0.871489 | 6.57E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene71651 | 0.836502 | 9.02E-57 | -1.69E-46 |
| MS.gene054642 | MS.gene71651 | 0.855351 | 6.69E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene71651 | -0.82284 | 1.91E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene71651 | 0.859118 | 5.16E-63 | -1.69E-46 |
| MS.gene054927 | MS.gene71651 | 0.807688 | 4.47E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene71651 | 0.817808 | 2.72E-52 | -1.69E-46 |
| MS.gene054954 | MS.gene71651 | 0.885635 | 6.86E-72 | -1.69E-46 |
| MS.gene05505 | MS.gene71651 | 0.812925 | 3.32E-51 | -1.69E-46 |
| MS.gene055224 | MS.gene71651 | 0.852238 | 5.26E-61 | -1.69E-46 |
| MS.gene055362 | MS.gene71651 | 0.873139 | 1.85E-67 | -1.69E-46 |
| MS.gene055502 | MS.gene71651 | 0.859939 | 2.92E-63 | -1.69E-46 |
| MS.gene055577 | MS.gene71651 | 0.857209 | 1.91E-62 | -1.69E-46 |
| MS.gene055629 | MS.gene71651 | 0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene71651 | 0.850899 | 1.26E-60 | -1.69E-46 |
| MS.gene055748 | MS.gene71651 | 0.858787 | 6.48E-63 | -1.69E-46 |
| MS.gene055750 | MS.gene71651 | 0.894082 | 3.44E-75 | -1.69E-46 |
| MS.gene055751 | MS.gene71651 | 0.870858 | 1.06E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene71651 | 0.881962 | 1.55E-70 | -1.69E-46 |
| MS.gene055849 | MS.gene71651 | 0.832338 | 1.00E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene71651 | 0.913544 | 5.44E-84 | -1.69E-46 |
| MS.gene055909 | MS.gene71651 | 0.800403 | 1.47E-48 | -1.69E-46 |
| MS.gene055941 | MS.gene71651 | 0.816072 | 6.68E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene71651 | 0.824351 | 8.46E-54 | -1.69E-46 |
| MS.gene056046 | MS.gene71651 | 0.886603 | 2.96E-72 | -1.69E-46 |
| MS.gene056166 | MS.gene71651 | 0.876331 | 1.52E-68 | -1.69E-46 |
| MS.gene056374 | MS.gene71651 | 0.811185 | 7.94E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene71651 | 0.8437 | 1.19E-58 | -1.69E-46 |
| MS.gene056422 | MS.gene71651 | 0.837763 | 4.29E-57 | -1.69E-46 |
| MS.gene056446 | MS.gene71651 | 0.879872 | 8.74E-70 | -1.69E-46 |
| MS.gene056448 | MS.gene71651 | 0.812213 | 4.75E-51 | -1.69E-46 |
| MS.gene056450 | MS.gene71651 | 0.801858 | 7.38E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene71651 | 0.811461 | 6.92E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene71651 | 0.939464 | 1.22E-99 | -1.69E-46 |
| MS.gene056510 | MS.gene71651 | 0.884697 | 1.54E-71 | -1.69E-46 |
| MS.gene056657 | MS.gene71651 | 0.879085 | 1.66E-69 | -1.69E-46 |
| MS.gene05666 | MS.gene71651 | 0.800519 | 1.39E-48 | -1.69E-46 |
| MS.gene056692 | MS.gene71651 | 0.820675 | 6.05E-53 | -1.69E-46 |
| MS.gene056878 | MS.gene71651 | 0.860453 | 2.04E-63 | -1.69E-46 |
| MS.gene057019 | MS.gene71651 | 0.809939 | 1.48E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene71651 | 0.857096 | 2.06E-62 | -1.69E-46 |
| MS.gene057086 | MS.gene71651 | 0.87549 | 2.96E-68 | -1.69E-46 |
| MS.gene057331 | MS.gene71651 | 0.818776 | 1.64E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene71651 | 0.812428 | 4.26E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene71651 | 0.84946 | 3.19E-60 | -1.69E-46 |
| MS.gene057734 | MS.gene71651 | 0.844798 | 6.05E-59 | -1.69E-46 |
| MS.gene057831 | MS.gene71651 | 0.825619 | 4.25E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene71651 | 0.837808 | 4.18E-57 | -1.69E-46 |
| MS.gene057876 | MS.gene71651 | 0.800486 | 1.41E-48 | -1.69E-46 |
| MS.gene05787 | MS.gene71651 | 0.879631 | 1.06E-69 | -1.69E-46 |
| MS.gene058130 | MS.gene71651 | 0.823761 | 1.16E-53 | -1.69E-46 |
| MS.gene058157 | MS.gene71651 | 0.825923 | 3.60E-54 | -1.69E-46 |
| MS.gene058171 | MS.gene71651 | -0.809547 | 1.79E-50 | -1.69E-46 |
| MS.gene058173 | MS.gene71651 | -0.80988 | 1.52E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene71651 | -0.814377 | 1.59E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene71651 | -0.833165 | 6.24E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene71651 | 0.838409 | 2.93E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene71651 | 0.861369 | 1.08E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene71651 | 0.874018 | 9.37E-68 | -1.69E-46 |
| MS.gene058544 | MS.gene71651 | 0.837396 | 5.33E-57 | -1.69E-46 |
| MS.gene058773 | MS.gene71651 | 0.833175 | 6.20E-56 | -1.69E-46 |
| MS.gene058838 | MS.gene71651 | 0.849815 | 2.54E-60 | -1.69E-46 |
| MS.gene059022 | MS.gene71651 | 0.866436 | 2.86E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene71651 | 0.858101 | 1.04E-62 | -1.69E-46 |
| MS.gene05913 | MS.gene71651 | 0.864996 | 8.13E-65 | -1.69E-46 |
| MS.gene059305 | MS.gene71651 | 0.806008 | 1.01E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene71651 | 0.888451 | 5.83E-73 | -1.69E-46 |
| MS.gene059368 | MS.gene71651 | 0.839596 | 1.44E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene71651 | 0.898349 | 5.79E-77 | -1.69E-46 |
| MS.gene059677 | MS.gene71651 | 0.839978 | 1.15E-57 | -1.69E-46 |
| MS.gene059680 | MS.gene71651 | 0.809475 | 1.86E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene71651 | -0.801102 | 1.05E-48 | -1.69E-46 |
| MS.gene059718 | MS.gene71651 | 0.856373 | 3.36E-62 | -1.69E-46 |
| MS.gene059756 | MS.gene71651 | 0.800191 | 1.62E-48 | -1.69E-46 |
| MS.gene059801 | MS.gene71651 | 0.821673 | 3.56E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene71651 | 0.880629 | 4.69E-70 | -1.69E-46 |
| MS.gene059865 | MS.gene71651 | 0.923613 | 2.11E-89 | -1.69E-46 |
| MS.gene05995 | MS.gene71651 | 0.800152 | 1.65E-48 | -1.69E-46 |
| MS.gene05996 | MS.gene71651 | 0.811156 | 8.06E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene71651 | 0.886902 | 2.28E-72 | -1.69E-46 |
| MS.gene060295 | MS.gene71651 | 0.803028 | 4.24E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene71651 | 0.817079 | 3.97E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene71651 | 0.869602 | 2.74E-66 | -1.69E-46 |
| MS.gene060593 | MS.gene71651 | -0.819225 | 1.30E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene71651 | -0.843856 | 1.08E-58 | -1.69E-46 |
| MS.gene060703 | MS.gene71651 | 0.862845 | 3.80E-64 | -1.69E-46 |
| MS.gene060762 | MS.gene71651 | 0.84983 | 2.51E-60 | -1.69E-46 |
| MS.gene060778 | MS.gene71651 | 0.920907 | 7.05E-88 | -1.69E-46 |
| MS.gene06077 | MS.gene71651 | 0.891042 | 5.70E-74 | -1.69E-46 |
| MS.gene060835 | MS.gene71651 | 0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene71651 | 0.811049 | 8.50E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene71651 | 0.900898 | 4.62E-78 | -1.69E-46 |
| MS.gene060982 | MS.gene71651 | 0.927831 | 6.78E-92 | -1.69E-46 |
| MS.gene061044 | MS.gene71651 | -0.808405 | 3.15E-50 | -1.69E-46 |
| MS.gene061218 | MS.gene71651 | 0.831732 | 1.41E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71651.t1 | MTR_1g107165 | 97.706 | 523 | 10 | 1 | 1 | 521 | 1 | 523 | 0.0 | 1054 |
| MS.gene71651.t1 | MTR_5g083500 | 28.143 | 533 | 318 | 18 | 1 | 514 | 7 | 493 | 5.80e-52 | 184 |
| MS.gene71651.t1 | MTR_3g071950 | 27.514 | 527 | 327 | 14 | 2 | 514 | 7 | 492 | 7.18e-50 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71651.t1 | AT2G15020 | 49.351 | 539 | 235 | 12 | 1 | 517 | 1 | 523 | 0.0 | 528 |
| MS.gene71651.t1 | AT5G64190 | 25.093 | 538 | 337 | 15 | 2 | 516 | 8 | 502 | 1.67e-46 | 170 |
| MS.gene71651.t1 | AT5G64190 | 25.093 | 538 | 337 | 15 | 2 | 516 | 7 | 501 | 1.67e-46 | 170 |
| MS.gene71651.t1 | AT2G40390 | 27.462 | 528 | 330 | 18 | 2 | 516 | 8 | 495 | 4.27e-40 | 152 |
Find 139 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAGGAGTGGGAGGAAATT+AGG | 0.150832 | 1.4:+82586455 | None:intergenic |
| TCCTTCCCGGGCTCGGGTTT+GGG | 0.154770 | 1.4:-82585715 | MS.gene71651:CDS |
| GTTTGGGTGGGCCCGGAAAT+TGG | 0.177853 | 1.4:-82585699 | MS.gene71651:CDS |
| CTCAAAGCAGAGCGAACTTC+TGG | 0.228304 | 1.4:-82586590 | MS.gene71651:CDS |
| TTCCTTCCCGGGCTCGGGTT+TGG | 0.231232 | 1.4:-82585716 | MS.gene71651:CDS |
| AAGAAAATGGAGAGGGATTC+TGG | 0.256277 | 1.4:+82586314 | None:intergenic |
| GTTGATTTGCCTCTAATTCA+TGG | 0.263186 | 1.4:-82585177 | MS.gene71651:CDS |
| GTAGGAGTGGGAGGAAATTA+GGG | 0.286085 | 1.4:+82586456 | None:intergenic |
| ACATAACTAGCTCCAATTTC+CGG | 0.286974 | 1.4:+82585687 | None:intergenic |
| CACCATACAATATGGATATT+TGG | 0.297897 | 1.4:-82586721 | None:intergenic |
| GAAATTGAGAAGGTTGTTAA+TGG | 0.304105 | 1.4:-82585615 | MS.gene71651:CDS |
| GAAAACAAGGTTGAAGAAAA+TGG | 0.312483 | 1.4:+82586301 | None:intergenic |
| ATGGTGCATTATAAGAGAAT+TGG | 0.313676 | 1.4:-82586081 | MS.gene71651:CDS |
| CATTTCTCGGAGATCCAAAT+AGG | 0.321681 | 1.4:+82586497 | None:intergenic |
| CTCTGTTTCATGCGCACCCT+TGG | 0.328639 | 1.4:-82586119 | MS.gene71651:CDS |
| GCTTCCACGAGCCCACTTCT+TGG | 0.331509 | 1.4:+82585448 | None:intergenic |
| GTAATAGCAGGGGATGAATA+TGG | 0.339074 | 1.4:-82585345 | MS.gene71651:CDS |
| CATAACTAGCTCCAATTTCC+GGG | 0.345763 | 1.4:+82585688 | None:intergenic |
| CGTCTCCATGTGGCGAGATT+AGG | 0.347974 | 1.4:-82585783 | MS.gene71651:CDS |
| ACCGACCCGCTCTTACTAAA+TGG | 0.353331 | 1.4:+82585369 | None:intergenic |
| GTGAGTTGGATATGATTTCT+TGG | 0.353682 | 1.4:+82586423 | None:intergenic |
| TTATGTGGCAGGCTTGAGTT+TGG | 0.357892 | 1.4:-82585670 | MS.gene71651:CDS |
| GCCAGTTTCATAGTCATAAC+TGG | 0.380966 | 1.4:+82585969 | None:intergenic |
| GCCAGTTATGACTATGAAAC+TGG | 0.387517 | 1.4:-82585970 | MS.gene71651:CDS |
| TGAAGAGAGTGTGCATTTCT+CGG | 0.388125 | 1.4:+82586484 | None:intergenic |
| TTGGGTACATAATAGCAAAA+TGG | 0.392593 | 1.4:-82586100 | MS.gene71651:CDS |
| GGCTCGGGTTTGGGTGGGCC+CGG | 0.397924 | 1.4:-82585706 | MS.gene71651:CDS |
| CTAGCAAGTTCGAACTTCAT+TGG | 0.398302 | 1.4:+82586647 | None:intergenic |
| TGCGACGCGCCTAGCGAGGC+AGG | 0.402409 | 1.4:-82586251 | MS.gene71651:CDS |
| TGGTGCATTATAAGAGAATT+GGG | 0.410752 | 1.4:-82586080 | MS.gene71651:CDS |
| ATGAAACTGGCGCGAAACTA+CGG | 0.423192 | 1.4:-82585957 | MS.gene71651:CDS |
| ATATGATTTCTTGGAGGAGT+TGG | 0.425448 | 1.4:+82586432 | None:intergenic |
| GTGTGTTGAAGTGGAGGATA+GGG | 0.426343 | 1.4:-82585281 | MS.gene71651:CDS |
| ATGATCCATGCTATGGGCTC+TGG | 0.428592 | 1.4:+82586350 | None:intergenic |
| AGTGTGTTGAAGTGGAGGAT+AGG | 0.432586 | 1.4:-82585282 | MS.gene71651:CDS |
| GGCCCACCCAAACCCGAGCC+CGG | 0.433858 | 1.4:+82585709 | None:intergenic |
| ACGGGTGATGACCCGATTCA+TGG | 0.434000 | 1.4:-82585423 | MS.gene71651:CDS |
| TATGTGGCAGGCTTGAGTTT+GGG | 0.448486 | 1.4:-82585669 | MS.gene71651:CDS |
| GATGAATATGGAGAAGAAGT+AGG | 0.452069 | 1.4:-82585333 | MS.gene71651:CDS |
| CTTGAGTTTGGGTCGGTCTA+CGG | 0.453754 | 1.4:-82585658 | MS.gene71651:CDS |
| CTCATTCCACTCTACTGAGC+TGG | 0.458461 | 1.4:+82586679 | None:intergenic |
| GGAGGAGTTGGAGTAGGAGT+GGG | 0.460854 | 1.4:+82586444 | None:intergenic |
| GACAACGCAGTTTCGAGAAC+CGG | 0.463504 | 1.4:+82586200 | None:intergenic |
| TCTGTTTCATGCGCACCCTT+GGG | 0.465524 | 1.4:-82586118 | MS.gene71651:CDS |
| TACCTGCCTGACCAAGCAAA+AGG | 0.472557 | 1.4:-82585240 | MS.gene71651:CDS |
| TGGAGGAGTTGGAGTAGGAG+TGG | 0.474177 | 1.4:+82586443 | None:intergenic |
| TCCCGGGCTCGGGTTTGGGT+GGG | 0.474749 | 1.4:-82585711 | MS.gene71651:CDS |
| TGAAACTGGCGCGAAACTAC+GGG | 0.475994 | 1.4:-82585956 | MS.gene71651:CDS |
| AGCGGGTCGGTTGTAATAGC+AGG | 0.479382 | 1.4:-82585357 | MS.gene71651:CDS |
| ACCTTCATGGTATTCTTACA+AGG | 0.479621 | 1.4:-82586545 | MS.gene71651:CDS |
| ATGCTAAGGAGTCAATAATC+AGG | 0.479874 | 1.4:-82585908 | MS.gene71651:CDS |
| CGGTCTAGCTCACCACCAAT+TGG | 0.481424 | 1.4:-82585883 | MS.gene71651:CDS |
| TCCGTGGCGTAAGAGAATTT+CGG | 0.482234 | 1.4:+82586026 | None:intergenic |
| ATGACCCGATTCATGGGTTG+AGG | 0.484185 | 1.4:-82585416 | MS.gene71651:CDS |
| CGAGTCTATGATCCATGCTA+TGG | 0.484977 | 1.4:+82586343 | None:intergenic |
| CGCTTGCGACGCGCCTAGCG+AGG | 0.486831 | 1.4:-82586255 | MS.gene71651:CDS |
| GAGAACAAAGAGTTGGAGAA+TGG | 0.487193 | 1.4:-82585532 | MS.gene71651:CDS |
| TTCCCGGGCTCGGGTTTGGG+TGG | 0.488666 | 1.4:-82585712 | MS.gene71651:CDS |
| TTTCTTGGAGGAGTTGGAGT+AGG | 0.492223 | 1.4:+82586438 | None:intergenic |
| TGTGTTGAAGTGGAGGATAG+GGG | 0.494047 | 1.4:-82585280 | MS.gene71651:CDS |
| TCAAAGCAGAGCGAACTTCT+GGG | 0.497368 | 1.4:-82586589 | MS.gene71651:CDS |
| GTGGAGGTTAAGTAAAGAGA+TGG | 0.497916 | 1.4:-82585310 | MS.gene71651:CDS |
| TTTCCACTCGTTACTTGCTC+CGG | 0.502153 | 1.4:-82586219 | MS.gene71651:CDS |
| ACCCAAACCCGAGCCCGGGA+AGG | 0.505885 | 1.4:+82585714 | None:intergenic |
| AAGCTTCAGCTAAGTCTTCG+AGG | 0.506004 | 1.4:-82585560 | MS.gene71651:CDS |
| ATTTCAAGGTATTGATGCTA+AGG | 0.506261 | 1.4:-82585922 | MS.gene71651:CDS |
| ATGAATATGGAGAAGAAGTA+GGG | 0.506264 | 1.4:-82585332 | MS.gene71651:CDS |
| GGGCAAAACGGTAAATTTCA+AGG | 0.509959 | 1.4:-82585936 | MS.gene71651:CDS |
| ACTGCACGTGTGCTTCCAAT+TGG | 0.511898 | 1.4:+82585868 | None:intergenic |
| TGGAAGGGAGTGTGTTGAAG+TGG | 0.512738 | 1.4:-82585290 | MS.gene71651:CDS |
| AGAAGCACTAGTAACCTTCA+TGG | 0.513303 | 1.4:-82586558 | MS.gene71651:CDS |
| ATTATAAGAGAATTGGGTGT+AGG | 0.514599 | 1.4:-82586074 | MS.gene71651:CDS |
| GCCCACCCAAACCCGAGCCC+GGG | 0.519196 | 1.4:+82585710 | None:intergenic |
| GGAGAATGAGAACAAAGAGT+TGG | 0.522842 | 1.4:-82585539 | MS.gene71651:CDS |
| AGTGGGCTCGTGGAAGCCTA+CGG | 0.523175 | 1.4:-82585442 | MS.gene71651:CDS |
| CGGGCCAAGAAGTGGGCTCG+TGG | 0.526068 | 1.4:-82585452 | MS.gene71651:CDS |
| CGAGAAATCAGATATTTCAA+AGG | 0.531598 | 1.4:-82585586 | MS.gene71651:CDS |
| GGTTAAGTAAAGAGATGGAA+GGG | 0.532562 | 1.4:-82585305 | MS.gene71651:CDS |
| ATTGGAGCTAGTTATGTGGC+AGG | 0.533692 | 1.4:-82585681 | MS.gene71651:CDS |
| AAGTTCGAACTTGCTAGAGA+TGG | 0.535314 | 1.4:-82586641 | MS.gene71651:CDS |
| TCATTCCACTCTACTGAGCT+GGG | 0.537296 | 1.4:+82586680 | None:intergenic |
| GTGGGCTCGTGGAAGCCTAC+GGG | 0.538592 | 1.4:-82585441 | MS.gene71651:CDS |
| CGGGTGATGACCCGATTCAT+GGG | 0.539719 | 1.4:-82585422 | MS.gene71651:CDS |
| GGAGTTGGAGTAGGAGTGGG+AGG | 0.540122 | 1.4:+82586447 | None:intergenic |
| ATGGAGAAGAAGTAGGGTGG+AGG | 0.540386 | 1.4:-82585326 | MS.gene71651:CDS |
| GTGTTGAAGTGGAGGATAGG+GGG | 0.541041 | 1.4:-82585279 | MS.gene71651:CDS |
| GCGCGAAACTACGGGCAAAA+CGG | 0.542584 | 1.4:-82585948 | MS.gene71651:CDS |
| TAGAGTGAACCTGCCTCGCT+AGG | 0.545326 | 1.4:+82586242 | None:intergenic |
| GACCCGATTCATGGGTTGAG+GGG | 0.549347 | 1.4:-82585414 | MS.gene71651:CDS |
| ATTGGAAGCACACGTGCAGT+TGG | 0.551697 | 1.4:-82585865 | MS.gene71651:CDS |
| TAATATGACGGGCCAAGAAG+TGG | 0.553598 | 1.4:-82585460 | MS.gene71651:CDS |
| ATCGTGTGCTGTGGGTGAGT+TGG | 0.557028 | 1.4:+82586409 | None:intergenic |
| AATATGGAGAAGAAGTAGGG+TGG | 0.557252 | 1.4:-82585329 | MS.gene71651:CDS |
| TGGCAGGCTTGAGTTTGGGT+CGG | 0.560008 | 1.4:-82585665 | MS.gene71651:CDS |
| ACCTGCCTGACCAAGCAAAA+GGG | 0.564399 | 1.4:-82585239 | MS.gene71651:CDS |
| TACACCTACGGTAATAAAGA+AGG | 0.566525 | 1.4:+82586151 | None:intergenic |
| GGAGAATAATGAAAGAGAAG+TGG | 0.566557 | 1.4:-82585637 | MS.gene71651:CDS |
| ATAGACCATTTAGTAAGAGC+GGG | 0.569119 | 1.4:-82585374 | MS.gene71651:CDS |
| AACTCCCCAGCTCAGTAGAG+TGG | 0.570068 | 1.4:-82586685 | MS.gene71651:CDS |
| TAAGAGAATTTCGGATTCGA+AGG | 0.571957 | 1.4:+82586035 | None:intergenic |
| GTGCAGTTGGAATATACAGT+TGG | 0.573238 | 1.4:-82585852 | MS.gene71651:CDS |
| TGACCCGATTCATGGGTTGA+GGG | 0.575454 | 1.4:-82585415 | MS.gene71651:CDS |
| AGTTGGATATGATTTCTTGG+AGG | 0.577043 | 1.4:+82586426 | None:intergenic |
| AGGTTAAGTAAAGAGATGGA+AGG | 0.577773 | 1.4:-82585306 | MS.gene71651:CDS |
| ACAATATGGATATTTGGTCA+TGG | 0.577891 | 1.4:-82586715 | None:intergenic |
| AAGAGAAGTGGAAATTGAGA+AGG | 0.580891 | 1.4:-82585625 | MS.gene71651:CDS |
| GCACGTGTGCTTCCAATTGG+TGG | 0.586502 | 1.4:+82585871 | None:intergenic |
| TCTTACGCCACGGAGTCTCA+AGG | 0.587357 | 1.4:-82586017 | MS.gene71651:CDS |
| GAGTCTATGATCCATGCTAT+GGG | 0.587822 | 1.4:+82586344 | None:intergenic |
| AATATGACGGGCCAAGAAGT+GGG | 0.587989 | 1.4:-82585459 | MS.gene71651:CDS |
| GCGGGTCGGTTGTAATAGCA+GGG | 0.593458 | 1.4:-82585356 | MS.gene71651:CDS |
| GCAAGTGCTATCGTGTGCTG+TGG | 0.594345 | 1.4:+82586400 | None:intergenic |
| AGAACCTTCTTTATTACCGT+AGG | 0.595571 | 1.4:-82586155 | MS.gene71651:CDS |
| ACCCGATTCATGGGTTGAGG+GGG | 0.596908 | 1.4:-82585413 | MS.gene71651:CDS |
| GAATGGATCAAGACGCGGAG+GGG | 0.597718 | 1.4:-82585515 | MS.gene71651:CDS |
| GAGTTCAGTGTCTACACCTA+CGG | 0.599835 | 1.4:+82586139 | None:intergenic |
| AAGGTTGAAGAAAATGGAGA+GGG | 0.609805 | 1.4:+82586307 | None:intergenic |
| TCAAACCAGAGCCCATAGCA+TGG | 0.613481 | 1.4:-82586355 | MS.gene71651:CDS |
| AAGGAGTCAATAATCAGGTA+CGG | 0.618007 | 1.4:-82585903 | MS.gene71651:CDS |
| CAAGGTTGAAGAAAATGGAG+AGG | 0.624633 | 1.4:+82586306 | None:intergenic |
| TCCGAAATTCTCTTACGCCA+CGG | 0.629660 | 1.4:-82586027 | MS.gene71651:CDS |
| GCCTTGTAAGAATACCATGA+AGG | 0.630625 | 1.4:+82586544 | None:intergenic |
| AATAGACCATTTAGTAAGAG+CGG | 0.634830 | 1.4:-82585375 | MS.gene71651:CDS |
| AAGGGAGTGTGTTGAAGTGG+AGG | 0.645267 | 1.4:-82585287 | MS.gene71651:CDS |
| ACCATTTAGTAAGAGCGGGT+CGG | 0.645800 | 1.4:-82585370 | MS.gene71651:CDS |
| GGAAATTGGAGCTAGTTATG+TGG | 0.646603 | 1.4:-82585685 | MS.gene71651:CDS |
| TAAAACCTAATCTCGCCACA+TGG | 0.646686 | 1.4:+82585778 | None:intergenic |
| GAACCGGAGCAAGTAACGAG+TGG | 0.649394 | 1.4:+82586216 | None:intergenic |
| GAGAATGGATCAAGACGCGG+AGG | 0.650927 | 1.4:-82585517 | MS.gene71651:CDS |
| AGAGACGAATGGTGAAAACA+AGG | 0.653167 | 1.4:+82586288 | None:intergenic |
| CAAGTGCTATCGTGTGCTGT+GGG | 0.657065 | 1.4:+82586401 | None:intergenic |
| GCATAGCCAAAAGAGACGAA+TGG | 0.660735 | 1.4:+82586277 | None:intergenic |
| AGAATGGATCAAGACGCGGA+GGG | 0.664709 | 1.4:-82585516 | MS.gene71651:CDS |
| CATTCCACTCTACTGAGCTG+GGG | 0.683835 | 1.4:+82586681 | None:intergenic |
| TTGAAACTAGATGTATTGAG+TGG | 0.685420 | 1.4:-82585209 | MS.gene71651:CDS |
| CGGGTCGGTTGTAATAGCAG+GGG | 0.688298 | 1.4:-82585355 | MS.gene71651:CDS |
| TGAATCGGGTCATCACCCGT+AGG | 0.692591 | 1.4:+82585426 | None:intergenic |
| TGATAATATACGTCTCCATG+TGG | 0.695983 | 1.4:-82585793 | MS.gene71651:CDS |
| TTGGAGAATGGATCAAGACG+CGG | 0.707631 | 1.4:-82585520 | MS.gene71651:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAATTTTCCATGAATTAG+AGG | + | chr1.4:82586709-82586728 | None:intergenic | 25.0% |
| !! | TATACAGTTGGATTTTATGA+TGG | - | chr1.4:82586034-82586053 | MS.gene71651:CDS | 25.0% |
| !! | TGTTTTGCATGATAATATGA+CGG | - | chr1.4:82586402-82586421 | MS.gene71651:CDS | 25.0% |
| !!! | ATTTTATGATGGATTCATTC+AGG | - | chr1.4:82586045-82586064 | MS.gene71651:CDS | 25.0% |
| AATAGACCATTTAGTAAGAG+CGG | - | chr1.4:82586499-82586518 | MS.gene71651:CDS | 30.0% | |
| ATGAATATGGAGAAGAAGTA+GGG | - | chr1.4:82586542-82586561 | MS.gene71651:CDS | 30.0% | |
| ATGGTGCATTATAAGAGAAT+TGG | - | chr1.4:82585793-82585812 | MS.gene71651:CDS | 30.0% | |
| ATTATAAGAGAATTGGGTGT+AGG | - | chr1.4:82585800-82585819 | MS.gene71651:CDS | 30.0% | |
| CGAGAAATCAGATATTTCAA+AGG | - | chr1.4:82586288-82586307 | MS.gene71651:CDS | 30.0% | |
| GAAAACAAGGTTGAAGAAAA+TGG | + | chr1.4:82585576-82585595 | None:intergenic | 30.0% | |
| GAAATTGAGAAGGTTGTTAA+TGG | - | chr1.4:82586259-82586278 | MS.gene71651:CDS | 30.0% | |
| TGGTGCATTATAAGAGAATT+GGG | - | chr1.4:82585794-82585813 | MS.gene71651:CDS | 30.0% | |
| TTGAAACTAGATGTATTGAG+TGG | - | chr1.4:82586665-82586684 | MS.gene71651:CDS | 30.0% | |
| TTGGGTACATAATAGCAAAA+TGG | - | chr1.4:82585774-82585793 | MS.gene71651:CDS | 30.0% | |
| ! | GTTTTGCATGATAATATGAC+GGG | - | chr1.4:82586403-82586422 | MS.gene71651:CDS | 30.0% |
| !! | ATTTCAAGGTATTGATGCTA+AGG | - | chr1.4:82585952-82585971 | MS.gene71651:CDS | 30.0% |
| !! | TTTTAAACATGGTGATGATG+TGG | - | chr1.4:82586114-82586133 | MS.gene71651:CDS | 30.0% |
| !!! | ATTTTGCTATTATGTACCCA+AGG | + | chr1.4:82585775-82585794 | None:intergenic | 30.0% |
| !!! | TTTTGCTATTATGTACCCAA+GGG | + | chr1.4:82585774-82585793 | None:intergenic | 30.0% |
| AAGAGAAGTGGAAATTGAGA+AGG | - | chr1.4:82586249-82586268 | MS.gene71651:CDS | 35.0% | |
| AAGGAGTCAATAATCAGGTA+CGG | - | chr1.4:82585971-82585990 | MS.gene71651:CDS | 35.0% | |
| AAGGTTGAAGAAAATGGAGA+GGG | + | chr1.4:82585570-82585589 | None:intergenic | 35.0% | |
| ACATAACTAGCTCCAATTTC+CGG | + | chr1.4:82586190-82586209 | None:intergenic | 35.0% | |
| ACCTTCATGGTATTCTTACA+AGG | - | chr1.4:82585329-82585348 | MS.gene71651:CDS | 35.0% | |
| AGAACCTTCTTTATTACCGT+AGG | - | chr1.4:82585719-82585738 | MS.gene71651:CDS | 35.0% | |
| AGGTTAAGTAAAGAGATGGA+AGG | - | chr1.4:82586568-82586587 | MS.gene71651:CDS | 35.0% | |
| AGTTGGATATGATTTCTTGG+AGG | + | chr1.4:82585451-82585470 | None:intergenic | 35.0% | |
| ATAGACCATTTAGTAAGAGC+GGG | - | chr1.4:82586500-82586519 | MS.gene71651:CDS | 35.0% | |
| ATATGATTTCTTGGAGGAGT+TGG | + | chr1.4:82585445-82585464 | None:intergenic | 35.0% | |
| ATGCTAAGGAGTCAATAATC+AGG | - | chr1.4:82585966-82585985 | MS.gene71651:CDS | 35.0% | |
| GATGAATATGGAGAAGAAGT+AGG | - | chr1.4:82586541-82586560 | MS.gene71651:CDS | 35.0% | |
| GGAGAATAATGAAAGAGAAG+TGG | - | chr1.4:82586237-82586256 | MS.gene71651:CDS | 35.0% | |
| GGTTAAGTAAAGAGATGGAA+GGG | - | chr1.4:82586569-82586588 | MS.gene71651:CDS | 35.0% | |
| TAAGAGAATTTCGGATTCGA+AGG | + | chr1.4:82585842-82585861 | None:intergenic | 35.0% | |
| TACACCTACGGTAATAAAGA+AGG | + | chr1.4:82585726-82585745 | None:intergenic | 35.0% | |
| TCAACACCCAAAAACCTATT+TGG | - | chr1.4:82585363-82585382 | MS.gene71651:CDS | 35.0% | |
| TGATAATATACGTCTCCATG+TGG | - | chr1.4:82586081-82586100 | MS.gene71651:CDS | 35.0% | |
| ! | GGAGATCCAAATAGGTTTTT+GGG | + | chr1.4:82585372-82585391 | None:intergenic | 35.0% |
| ! | GTGAGTTGGATATGATTTCT+TGG | + | chr1.4:82585454-82585473 | None:intergenic | 35.0% |
| ! | TTTTCACCATTCGTCTCTTT+TGG | - | chr1.4:82585591-82585610 | MS.gene71651:CDS | 35.0% |
| !! | CAAGGTTTTTGGATTCTGAA+AGG | - | chr1.4:82585875-82585894 | MS.gene71651:CDS | 35.0% |
| !! | GTTGATTTGCCTCTAATTCA+TGG | - | chr1.4:82586697-82586716 | MS.gene71651:CDS | 35.0% |
| !!! | ATAGGTTTTTGGGTGTTGAA+TGG | + | chr1.4:82585362-82585381 | None:intergenic | 35.0% |
| !!! | GCGAGATTAGGTTTTAAACA+TGG | - | chr1.4:82586103-82586122 | MS.gene71651:CDS | 35.0% |
| !!! | TGGTTTGAGTTTTTGAAGCT+GGG | + | chr1.4:82585507-82585526 | None:intergenic | 35.0% |
| AAGAAAATGGAGAGGGATTC+TGG | + | chr1.4:82585563-82585582 | None:intergenic | 40.0% | |
| AATATGGAGAAGAAGTAGGG+TGG | - | chr1.4:82586545-82586564 | MS.gene71651:CDS | 40.0% | |
| AGAGACGAATGGTGAAAACA+AGG | + | chr1.4:82585589-82585608 | None:intergenic | 40.0% | |
| CAAGGTTGAAGAAAATGGAG+AGG | + | chr1.4:82585571-82585590 | None:intergenic | 40.0% | |
| CATAACTAGCTCCAATTTCC+GGG | + | chr1.4:82586189-82586208 | None:intergenic | 40.0% | |
| CATTTCTCGGAGATCCAAAT+AGG | + | chr1.4:82585380-82585399 | None:intergenic | 40.0% | |
| CTAGCAAGTTCGAACTTCAT+TGG | + | chr1.4:82585230-82585249 | None:intergenic | 40.0% | |
| GAGAACAAAGAGTTGGAGAA+TGG | - | chr1.4:82586342-82586361 | MS.gene71651:CDS | 40.0% | |
| GAGTCTATGATCCATGCTAT+GGG | + | chr1.4:82585533-82585552 | None:intergenic | 40.0% | |
| GCCAGTTATGACTATGAAAC+TGG | - | chr1.4:82585904-82585923 | MS.gene71651:CDS | 40.0% | |
| GCCAGTTTCATAGTCATAAC+TGG | + | chr1.4:82585908-82585927 | None:intergenic | 40.0% | |
| GCCTTGTAAGAATACCATGA+AGG | + | chr1.4:82585333-82585352 | None:intergenic | 40.0% | |
| GGAAATTGGAGCTAGTTATG+TGG | - | chr1.4:82586189-82586208 | MS.gene71651:CDS | 40.0% | |
| GGAGAATGAGAACAAAGAGT+TGG | - | chr1.4:82586335-82586354 | MS.gene71651:CDS | 40.0% | |
| GGGCAAAACGGTAAATTTCA+AGG | - | chr1.4:82585938-82585957 | MS.gene71651:CDS | 40.0% | |
| GTAATAGCAGGGGATGAATA+TGG | - | chr1.4:82586529-82586548 | MS.gene71651:CDS | 40.0% | |
| GTGCAGTTGGAATATACAGT+TGG | - | chr1.4:82586022-82586041 | MS.gene71651:CDS | 40.0% | |
| GTGGAGGTTAAGTAAAGAGA+TGG | - | chr1.4:82586564-82586583 | MS.gene71651:CDS | 40.0% | |
| TAAAACCTAATCTCGCCACA+TGG | + | chr1.4:82586099-82586118 | None:intergenic | 40.0% | |
| ! | ACGAGAAACATTTTCCTTCC+CGG | - | chr1.4:82586146-82586165 | MS.gene71651:CDS | 40.0% |
| ! | CAAAATGACTCCCTTTTGCT+TGG | + | chr1.4:82586648-82586667 | None:intergenic | 40.0% |
| ! | CGGAGATCCAAATAGGTTTT+TGG | + | chr1.4:82585373-82585392 | None:intergenic | 40.0% |
| ! | TGAAGAGAGTGTGCATTTCT+CGG | + | chr1.4:82585393-82585412 | None:intergenic | 40.0% |
| !! | AAGTTCGAACTTGCTAGAGA+TGG | - | chr1.4:82585233-82585252 | MS.gene71651:CDS | 40.0% |
| !! | AGAAGCACTAGTAACCTTCA+TGG | - | chr1.4:82585316-82585335 | MS.gene71651:CDS | 40.0% |
| !!! | AGTTTTTGAAGCTGGGATCT+AGG | + | chr1.4:82585500-82585519 | None:intergenic | 40.0% |
| !!! | CTGGTTTGAGTTTTTGAAGC+TGG | + | chr1.4:82585508-82585527 | None:intergenic | 40.0% |
| !!! | GTTTTTGAAGCTGGGATCTA+GGG | + | chr1.4:82585499-82585518 | None:intergenic | 40.0% |
| AAGCTTCAGCTAAGTCTTCG+AGG | - | chr1.4:82586314-82586333 | MS.gene71651:CDS | 45.0% | |
| ACCATTTAGTAAGAGCGGGT+CGG | - | chr1.4:82586504-82586523 | MS.gene71651:CDS | 45.0% | |
| AGTAGGAGTGGGAGGAAATT+AGG | + | chr1.4:82585422-82585441 | None:intergenic | 45.0% | |
| AGTGTGTTGAAGTGGAGGAT+AGG | - | chr1.4:82586592-82586611 | MS.gene71651:CDS | 45.0% | |
| ATGAAACTGGCGCGAAACTA+CGG | - | chr1.4:82585917-82585936 | MS.gene71651:CDS | 45.0% | |
| ATTGGAGCTAGTTATGTGGC+AGG | - | chr1.4:82586193-82586212 | MS.gene71651:CDS | 45.0% | |
| CGAGTCTATGATCCATGCTA+TGG | + | chr1.4:82585534-82585553 | None:intergenic | 45.0% | |
| GAGTTCAGTGTCTACACCTA+CGG | + | chr1.4:82585738-82585757 | None:intergenic | 45.0% | |
| GCATAGCCAAAAGAGACGAA+TGG | + | chr1.4:82585600-82585619 | None:intergenic | 45.0% | |
| GTAGGAGTGGGAGGAAATTA+GGG | + | chr1.4:82585421-82585440 | None:intergenic | 45.0% | |
| GTGTGTTGAAGTGGAGGATA+GGG | - | chr1.4:82586593-82586612 | MS.gene71651:CDS | 45.0% | |
| TATGTGGCAGGCTTGAGTTT+GGG | - | chr1.4:82586205-82586224 | MS.gene71651:CDS | 45.0% | |
| TCAAAGCAGAGCGAACTTCT+GGG | - | chr1.4:82585285-82585304 | MS.gene71651:CDS | 45.0% | |
| TCATTCCACTCTACTGAGCT+GGG | + | chr1.4:82585197-82585216 | None:intergenic | 45.0% | |
| TCCGAAATTCTCTTACGCCA+CGG | - | chr1.4:82585847-82585866 | MS.gene71651:CDS | 45.0% | |
| TCCGTGGCGTAAGAGAATTT+CGG | + | chr1.4:82585851-82585870 | None:intergenic | 45.0% | |
| TGTGTTGAAGTGGAGGATAG+GGG | - | chr1.4:82586594-82586613 | MS.gene71651:CDS | 45.0% | |
| TTATGTGGCAGGCTTGAGTT+TGG | - | chr1.4:82586204-82586223 | MS.gene71651:CDS | 45.0% | |
| TTGGAGAATGGATCAAGACG+CGG | - | chr1.4:82586354-82586373 | MS.gene71651:CDS | 45.0% | |
| TTTCCACTCGTTACTTGCTC+CGG | - | chr1.4:82585655-82585674 | MS.gene71651:CDS | 45.0% | |
| TTTCTTGGAGGAGTTGGAGT+AGG | + | chr1.4:82585439-82585458 | None:intergenic | 45.0% | |
| ! | CGAGAAACATTTTCCTTCCC+GGG | - | chr1.4:82586147-82586166 | MS.gene71651:CDS | 45.0% |
| ! | GAGGATAGGGGGAGAATTTT+GGG | - | chr1.4:82586606-82586625 | MS.gene71651:CDS | 45.0% |
| !! | AATATGACGGGCCAAGAAGT+GGG | - | chr1.4:82586415-82586434 | MS.gene71651:CDS | 45.0% |
| !! | TAATATGACGGGCCAAGAAG+TGG | - | chr1.4:82586414-82586433 | MS.gene71651:CDS | 45.0% |
| ACCGACCCGCTCTTACTAAA+TGG | + | chr1.4:82586508-82586527 | None:intergenic | 50.0% | |
| ACCTGCCTGACCAAGCAAAA+GGG | - | chr1.4:82586635-82586654 | MS.gene71651:CDS | 50.0% | |
| ACTGCACGTGTGCTTCCAAT+TGG | + | chr1.4:82586009-82586028 | None:intergenic | 50.0% | |
| AGAATGGATCAAGACGCGGA+GGG | - | chr1.4:82586358-82586377 | MS.gene71651:CDS | 50.0% | |
| ATGATCCATGCTATGGGCTC+TGG | + | chr1.4:82585527-82585546 | None:intergenic | 50.0% | |
| ATGGAGAAGAAGTAGGGTGG+AGG | - | chr1.4:82586548-82586567 | MS.gene71651:CDS | 50.0% | |
| CAAGTGCTATCGTGTGCTGT+GGG | + | chr1.4:82585476-82585495 | None:intergenic | 50.0% | |
| CATTCCACTCTACTGAGCTG+GGG | + | chr1.4:82585196-82585215 | None:intergenic | 50.0% | |
| CCAAAAACCTTGAGACTCCG+TGG | + | chr1.4:82585867-82585886 | None:intergenic | 50.0% | |
| CTCAAAGCAGAGCGAACTTC+TGG | - | chr1.4:82585284-82585303 | MS.gene71651:CDS | 50.0% | |
| CTCATTCCACTCTACTGAGC+TGG | + | chr1.4:82585198-82585217 | None:intergenic | 50.0% | |
| CTTGAGTTTGGGTCGGTCTA+CGG | - | chr1.4:82586216-82586235 | MS.gene71651:CDS | 50.0% | |
| GACAACGCAGTTTCGAGAAC+CGG | + | chr1.4:82585677-82585696 | None:intergenic | 50.0% | |
| GTGTTGAAGTGGAGGATAGG+GGG | - | chr1.4:82586595-82586614 | MS.gene71651:CDS | 50.0% | |
| TACCTGCCTGACCAAGCAAA+AGG | - | chr1.4:82586634-82586653 | MS.gene71651:CDS | 50.0% | |
| TCAAACCAGAGCCCATAGCA+TGG | - | chr1.4:82585519-82585538 | MS.gene71651:CDS | 50.0% | |
| TCTGTTTCATGCGCACCCTT+GGG | - | chr1.4:82585756-82585775 | MS.gene71651:CDS | 50.0% | |
| TGAAACTGGCGCGAAACTAC+GGG | - | chr1.4:82585918-82585937 | MS.gene71651:CDS | 50.0% | |
| ! | AACATTTTCCTTCCCGGGCT+CGG | - | chr1.4:82586152-82586171 | MS.gene71651:CDS | 50.0% |
| ! | AAGGGAGTGTGTTGAAGTGG+AGG | - | chr1.4:82586587-82586606 | MS.gene71651:CDS | 50.0% |
| ! | ATGACCCGATTCATGGGTTG+AGG | - | chr1.4:82586458-82586477 | MS.gene71651:CDS | 50.0% |
| ! | ATTGGAAGCACACGTGCAGT+TGG | - | chr1.4:82586009-82586028 | MS.gene71651:CDS | 50.0% |
| ! | CCACGGAGTCTCAAGGTTTT+TGG | - | chr1.4:82585864-82585883 | MS.gene71651:CDS | 50.0% |
| ! | GGAGGATAGGGGGAGAATTT+TGG | - | chr1.4:82586605-82586624 | MS.gene71651:CDS | 50.0% |
| ! | TGACCCGATTCATGGGTTGA+GGG | - | chr1.4:82586459-82586478 | MS.gene71651:CDS | 50.0% |
| ! | TGACTCCCTTTTGCTTGGTC+AGG | + | chr1.4:82586643-82586662 | None:intergenic | 50.0% |
| ! | TGGAAGGGAGTGTGTTGAAG+TGG | - | chr1.4:82586584-82586603 | MS.gene71651:CDS | 50.0% |
| AACTCCCCAGCTCAGTAGAG+TGG | - | chr1.4:82585189-82585208 | MS.gene71651:CDS | 55.0% | |
| ACGGGTGATGACCCGATTCA+TGG | - | chr1.4:82586451-82586470 | MS.gene71651:CDS | 55.0% | |
| AGCGGGTCGGTTGTAATAGC+AGG | - | chr1.4:82586517-82586536 | MS.gene71651:CDS | 55.0% | |
| ATCGTGTGCTGTGGGTGAGT+TGG | + | chr1.4:82585468-82585487 | None:intergenic | 55.0% | |
| CGGGTCGGTTGTAATAGCAG+GGG | - | chr1.4:82586519-82586538 | MS.gene71651:CDS | 55.0% | |
| CGGGTGATGACCCGATTCAT+GGG | - | chr1.4:82586452-82586471 | MS.gene71651:CDS | 55.0% | |
| CGTCTCCATGTGGCGAGATT+AGG | - | chr1.4:82586091-82586110 | MS.gene71651:CDS | 55.0% | |
| CTCTGTTTCATGCGCACCCT+TGG | - | chr1.4:82585755-82585774 | MS.gene71651:CDS | 55.0% | |
| GAACCGGAGCAAGTAACGAG+TGG | + | chr1.4:82585661-82585680 | None:intergenic | 55.0% | |
| GAATGGATCAAGACGCGGAG+GGG | - | chr1.4:82586359-82586378 | MS.gene71651:CDS | 55.0% | |
| GAGAATGGATCAAGACGCGG+AGG | - | chr1.4:82586357-82586376 | MS.gene71651:CDS | 55.0% | |
| GCAAGTGCTATCGTGTGCTG+TGG | + | chr1.4:82585477-82585496 | None:intergenic | 55.0% | |
| GCACGTGTGCTTCCAATTGG+TGG | + | chr1.4:82586006-82586025 | None:intergenic | 55.0% | |
| GCGCGAAACTACGGGCAAAA+CGG | - | chr1.4:82585926-82585945 | MS.gene71651:CDS | 55.0% | |
| GCGGGTCGGTTGTAATAGCA+GGG | - | chr1.4:82586518-82586537 | MS.gene71651:CDS | 55.0% | |
| GGAGGAGTTGGAGTAGGAGT+GGG | + | chr1.4:82585433-82585452 | None:intergenic | 55.0% | |
| TAGAGTGAACCTGCCTCGCT+AGG | + | chr1.4:82585635-82585654 | None:intergenic | 55.0% | |
| TCTTACGCCACGGAGTCTCA+AGG | - | chr1.4:82585857-82585876 | MS.gene71651:CDS | 55.0% | |
| TGAATCGGGTCATCACCCGT+AGG | + | chr1.4:82586451-82586470 | None:intergenic | 55.0% | |
| TGGAGGAGTTGGAGTAGGAG+TGG | + | chr1.4:82585434-82585453 | None:intergenic | 55.0% | |
| TGGCAGGCTTGAGTTTGGGT+CGG | - | chr1.4:82586209-82586228 | MS.gene71651:CDS | 55.0% | |
| ! | ACATTTTCCTTCCCGGGCTC+GGG | - | chr1.4:82586153-82586172 | MS.gene71651:CDS | 55.0% |
| ! | ACCCGATTCATGGGTTGAGG+GGG | - | chr1.4:82586461-82586480 | MS.gene71651:CDS | 55.0% |
| ! | CGGTCTAGCTCACCACCAAT+TGG | - | chr1.4:82585991-82586010 | MS.gene71651:CDS | 55.0% |
| ! | GACCCGATTCATGGGTTGAG+GGG | - | chr1.4:82586460-82586479 | MS.gene71651:CDS | 55.0% |
| ! | TCCCTTTTGCTTGGTCAGGC+AGG | + | chr1.4:82586639-82586658 | None:intergenic | 55.0% |
| CGCCCCCTCAACCCATGAAT+CGG | + | chr1.4:82586466-82586485 | None:intergenic | 60.0% | |
| GCCCCCTCAACCCATGAATC+GGG | + | chr1.4:82586465-82586484 | None:intergenic | 60.0% | |
| GCTTCCACGAGCCCACTTCT+TGG | + | chr1.4:82586429-82586448 | None:intergenic | 60.0% | |
| GGAGTTGGAGTAGGAGTGGG+AGG | + | chr1.4:82585430-82585449 | None:intergenic | 60.0% | |
| GGGTTGAGGGGGCGATATGT+CGG | - | chr1.4:82586472-82586491 | MS.gene71651:CDS | 60.0% | |
| GGTTGAGGGGGCGATATGTC+GGG | - | chr1.4:82586473-82586492 | MS.gene71651:CDS | 60.0% | |
| GTTGAGGGGGCGATATGTCG+GGG | - | chr1.4:82586474-82586493 | MS.gene71651:CDS | 60.0% | |
| GTTTGGGTGGGCCCGGAAAT+TGG | - | chr1.4:82586175-82586194 | MS.gene71651:CDS | 60.0% | |
| ! | AGTGGGCTCGTGGAAGCCTA+CGG | - | chr1.4:82586432-82586451 | MS.gene71651:CDS | 60.0% |
| GTGGGCTCGTGGAAGCCTAC+GGG | - | chr1.4:82586433-82586452 | MS.gene71651:CDS | 65.0% | |
| TCCTTCCCGGGCTCGGGTTT+GGG | - | chr1.4:82586159-82586178 | MS.gene71651:CDS | 65.0% | |
| TTCCTTCCCGGGCTCGGGTT+TGG | - | chr1.4:82586158-82586177 | MS.gene71651:CDS | 65.0% | |
| ACCCAAACCCGAGCCCGGGA+AGG | + | chr1.4:82586163-82586182 | None:intergenic | 70.0% | |
| TCCCGGGCTCGGGTTTGGGT+GGG | - | chr1.4:82586163-82586182 | MS.gene71651:CDS | 70.0% | |
| TTCCCGGGCTCGGGTTTGGG+TGG | - | chr1.4:82586162-82586181 | MS.gene71651:CDS | 70.0% | |
| ! | CGGGCCAAGAAGTGGGCTCG+TGG | - | chr1.4:82586422-82586441 | MS.gene71651:CDS | 70.0% |
| CGCTTGCGACGCGCCTAGCG+AGG | - | chr1.4:82585619-82585638 | MS.gene71651:CDS | 75.0% | |
| GCCCACCCAAACCCGAGCCC+GGG | + | chr1.4:82586167-82586186 | None:intergenic | 75.0% | |
| GGCCCACCCAAACCCGAGCC+CGG | + | chr1.4:82586168-82586187 | None:intergenic | 75.0% | |
| GGCTCGGGTTTGGGTGGGCC+CGG | - | chr1.4:82586168-82586187 | MS.gene71651:CDS | 75.0% | |
| TGCGACGCGCCTAGCGAGGC+AGG | - | chr1.4:82585623-82585642 | MS.gene71651:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 82585164 | 82586732 | 82585164 | ID=MS.gene71651 |
| chr1.4 | mRNA | 82585164 | 82586732 | 82585164 | ID=MS.gene71651.t1;Parent=MS.gene71651 |
| chr1.4 | exon | 82585164 | 82586732 | 82585164 | ID=MS.gene71651.t1.exon1;Parent=MS.gene71651.t1 |
| chr1.4 | CDS | 82585164 | 82586732 | 82585164 | ID=cds.MS.gene71651.t1;Parent=MS.gene71651.t1 |
| Gene Sequence |
| Protein sequence |
