Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83251.t1 | XP_013455235.1 | 96.4 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 3.20E-129 | 471.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83251.t1 | Q9SMS0 | 59.4 | 229 | 82 | 3 | 20 | 247 | 28 | 246 | 1.4e-69 | 264.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83251.t1 | A0A072UIK1 | 96.4 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 2.3e-129 | 471.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene83251 | 0.838432 | 2.89E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene83251 | 0.871432 | 6.87E-67 | -1.69E-46 |
| MS.gene049232 | MS.gene83251 | 0.900696 | 5.66E-78 | -1.69E-46 |
| MS.gene049285 | MS.gene83251 | 0.844261 | 8.44E-59 | -1.69E-46 |
| MS.gene049320 | MS.gene83251 | 0.851338 | 9.47E-61 | -1.69E-46 |
| MS.gene049369 | MS.gene83251 | 0.821033 | 5.00E-53 | -1.69E-46 |
| MS.gene049396 | MS.gene83251 | 0.908417 | 1.75E-81 | -1.69E-46 |
| MS.gene049552 | MS.gene83251 | 0.830616 | 2.66E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene83251 | 0.879102 | 1.64E-69 | -1.69E-46 |
| MS.gene049633 | MS.gene83251 | 0.848636 | 5.40E-60 | -1.69E-46 |
| MS.gene049656 | MS.gene83251 | 0.837785 | 4.23E-57 | -1.69E-46 |
| MS.gene049657 | MS.gene83251 | 0.804627 | 1.97E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene83251 | 0.819776 | 9.72E-53 | -1.69E-46 |
| MS.gene049865 | MS.gene83251 | 0.81285 | 3.44E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene83251 | 0.871122 | 8.69E-67 | -1.69E-46 |
| MS.gene050170 | MS.gene83251 | 0.894886 | 1.62E-75 | -1.69E-46 |
| MS.gene050216 | MS.gene83251 | 0.838998 | 2.06E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene83251 | 0.898961 | 3.17E-77 | -1.69E-46 |
| MS.gene050380 | MS.gene83251 | -0.804557 | 2.04E-49 | -1.69E-46 |
| MS.gene050381 | MS.gene83251 | -0.809403 | 1.93E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene83251 | 0.878317 | 3.10E-69 | -1.69E-46 |
| MS.gene050499 | MS.gene83251 | 0.847986 | 8.17E-60 | -1.69E-46 |
| MS.gene050502 | MS.gene83251 | 0.920519 | 1.15E-87 | -1.69E-46 |
| MS.gene050504 | MS.gene83251 | 0.851242 | 1.01E-60 | -1.69E-46 |
| MS.gene050518 | MS.gene83251 | 0.834023 | 3.81E-56 | -1.69E-46 |
| MS.gene050520 | MS.gene83251 | 0.83813 | 3.45E-57 | -1.69E-46 |
| MS.gene050538 | MS.gene83251 | 0.841748 | 3.94E-58 | -1.69E-46 |
| MS.gene050577 | MS.gene83251 | 0.844704 | 6.41E-59 | -1.69E-46 |
| MS.gene050593 | MS.gene83251 | 0.848583 | 5.59E-60 | -1.69E-46 |
| MS.gene050612 | MS.gene83251 | 0.840963 | 6.33E-58 | -1.69E-46 |
| MS.gene050662 | MS.gene83251 | 0.819947 | 8.88E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene83251 | 0.838887 | 2.20E-57 | -1.69E-46 |
| MS.gene050697 | MS.gene83251 | 0.851804 | 6.99E-61 | -1.69E-46 |
| MS.gene050699 | MS.gene83251 | 0.818448 | 1.95E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene83251 | 0.895624 | 8.03E-76 | -1.69E-46 |
| MS.gene050772 | MS.gene83251 | 0.885948 | 5.23E-72 | -1.69E-46 |
| MS.gene05080 | MS.gene83251 | 0.888726 | 4.57E-73 | -1.69E-46 |
| MS.gene05081 | MS.gene83251 | 0.831543 | 1.57E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene83251 | 0.901491 | 2.54E-78 | -1.69E-46 |
| MS.gene050871 | MS.gene83251 | 0.904052 | 1.83E-79 | -1.69E-46 |
| MS.gene050904 | MS.gene83251 | 0.816077 | 6.66E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene83251 | 0.890513 | 9.20E-74 | -1.69E-46 |
| MS.gene050986 | MS.gene83251 | 0.850255 | 1.91E-60 | -1.69E-46 |
| MS.gene05105 | MS.gene83251 | 0.817895 | 2.60E-52 | -1.69E-46 |
| MS.gene05118 | MS.gene83251 | 0.814315 | 1.64E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene83251 | 0.850347 | 1.80E-60 | -1.69E-46 |
| MS.gene051387 | MS.gene83251 | 0.821186 | 4.62E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene83251 | 0.882489 | 9.98E-71 | -1.69E-46 |
| MS.gene051551 | MS.gene83251 | 0.840421 | 8.79E-58 | -1.69E-46 |
| MS.gene051560 | MS.gene83251 | 0.802791 | 4.74E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene83251 | 0.808376 | 3.19E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene83251 | 0.848315 | 6.63E-60 | -1.69E-46 |
| MS.gene051838 | MS.gene83251 | 0.862722 | 4.14E-64 | -1.69E-46 |
| MS.gene051874 | MS.gene83251 | 0.833327 | 5.68E-56 | -1.69E-46 |
| MS.gene051941 | MS.gene83251 | 0.858134 | 1.01E-62 | -1.69E-46 |
| MS.gene052066 | MS.gene83251 | 0.856569 | 2.95E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene83251 | 0.888877 | 4.00E-73 | -1.69E-46 |
| MS.gene052346 | MS.gene83251 | 0.875364 | 3.27E-68 | -1.69E-46 |
| MS.gene052414 | MS.gene83251 | 0.85707 | 2.10E-62 | -1.69E-46 |
| MS.gene052421 | MS.gene83251 | 0.812512 | 4.08E-51 | -1.69E-46 |
| MS.gene052482 | MS.gene83251 | 0.867331 | 1.48E-65 | -1.69E-46 |
| MS.gene052486 | MS.gene83251 | 0.867978 | 9.19E-66 | -1.69E-46 |
| MS.gene052501 | MS.gene83251 | 0.823779 | 1.15E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene83251 | 0.864347 | 1.30E-64 | -1.69E-46 |
| MS.gene052504 | MS.gene83251 | 0.838058 | 3.60E-57 | -1.69E-46 |
| MS.gene052505 | MS.gene83251 | 0.820324 | 7.29E-53 | -1.69E-46 |
| MS.gene052506 | MS.gene83251 | 0.853017 | 3.15E-61 | -1.69E-46 |
| MS.gene052615 | MS.gene83251 | 0.834763 | 2.48E-56 | -1.69E-46 |
| MS.gene052822 | MS.gene83251 | 0.854259 | 1.39E-61 | -1.69E-46 |
| MS.gene052823 | MS.gene83251 | 0.863768 | 1.97E-64 | -1.69E-46 |
| MS.gene052825 | MS.gene83251 | 0.854656 | 1.06E-61 | -1.69E-46 |
| MS.gene052916 | MS.gene83251 | 0.800134 | 1.66E-48 | -1.69E-46 |
| MS.gene052966 | MS.gene83251 | 0.877521 | 5.88E-69 | -1.69E-46 |
| MS.gene052982 | MS.gene83251 | 0.831201 | 1.91E-55 | -1.69E-46 |
| MS.gene052987 | MS.gene83251 | 0.80046 | 1.43E-48 | -1.69E-46 |
| MS.gene052999 | MS.gene83251 | 0.805095 | 1.57E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene83251 | 0.80625 | 9.01E-50 | -1.69E-46 |
| MS.gene053117 | MS.gene83251 | 0.811308 | 7.47E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene83251 | 0.877684 | 5.16E-69 | -1.69E-46 |
| MS.gene053207 | MS.gene83251 | 0.841571 | 4.38E-58 | -1.69E-46 |
| MS.gene053213 | MS.gene83251 | 0.86429 | 1.35E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene83251 | 0.865984 | 3.97E-65 | -1.69E-46 |
| MS.gene053318 | MS.gene83251 | 0.842626 | 2.31E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene83251 | -0.80665 | 7.42E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene83251 | 0.896839 | 2.51E-76 | -1.69E-46 |
| MS.gene053449 | MS.gene83251 | 0.824688 | 7.05E-54 | -1.69E-46 |
| MS.gene053479 | MS.gene83251 | 0.854554 | 1.14E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene83251 | 0.819727 | 9.98E-53 | -1.69E-46 |
| MS.gene053505 | MS.gene83251 | 0.829833 | 4.13E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene83251 | 0.929384 | 7.51E-93 | -1.69E-46 |
| MS.gene053626 | MS.gene83251 | 0.912864 | 1.19E-83 | -1.69E-46 |
| MS.gene053632 | MS.gene83251 | 0.801103 | 1.05E-48 | -1.69E-46 |
| MS.gene053633 | MS.gene83251 | 0.837906 | 3.94E-57 | -1.69E-46 |
| MS.gene053824 | MS.gene83251 | 0.868265 | 7.42E-66 | -1.69E-46 |
| MS.gene053912 | MS.gene83251 | 0.820851 | 5.51E-53 | -1.69E-46 |
| MS.gene053916 | MS.gene83251 | 0.845284 | 4.47E-59 | -1.69E-46 |
| MS.gene054003 | MS.gene83251 | 0.871022 | 9.38E-67 | -1.69E-46 |
| MS.gene054408 | MS.gene83251 | 0.862003 | 6.89E-64 | -1.69E-46 |
| MS.gene054595 | MS.gene83251 | 0.887287 | 1.63E-72 | -1.69E-46 |
| MS.gene054600 | MS.gene83251 | 0.844936 | 5.55E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene83251 | 0.83379 | 4.36E-56 | -1.69E-46 |
| MS.gene054706 | MS.gene83251 | -0.821578 | 3.75E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene83251 | 0.836706 | 8.00E-57 | -1.69E-46 |
| MS.gene054927 | MS.gene83251 | 0.85211 | 5.72E-61 | -1.69E-46 |
| MS.gene05494 | MS.gene83251 | 0.852447 | 4.59E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene83251 | 0.853752 | 1.94E-61 | -1.69E-46 |
| MS.gene05505 | MS.gene83251 | 0.840133 | 1.04E-57 | -1.69E-46 |
| MS.gene055212 | MS.gene83251 | 0.802465 | 5.54E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene83251 | 0.88025 | 6.41E-70 | -1.69E-46 |
| MS.gene055289 | MS.gene83251 | 0.818303 | 2.10E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene83251 | 0.842807 | 2.06E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene83251 | 0.846204 | 2.52E-59 | -1.69E-46 |
| MS.gene055577 | MS.gene83251 | 0.873465 | 1.44E-67 | -1.69E-46 |
| MS.gene055629 | MS.gene83251 | 0.826087 | 3.29E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene83251 | 0.856479 | 3.13E-62 | -1.69E-46 |
| MS.gene055741 | MS.gene83251 | 0.861905 | 7.38E-64 | -1.69E-46 |
| MS.gene055744 | MS.gene83251 | 0.854193 | 1.45E-61 | -1.69E-46 |
| MS.gene055748 | MS.gene83251 | 0.842623 | 2.31E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene83251 | 0.871891 | 4.83E-67 | -1.69E-46 |
| MS.gene055751 | MS.gene83251 | 0.842552 | 2.41E-58 | -1.69E-46 |
| MS.gene055776 | MS.gene83251 | 0.809774 | 1.60E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene83251 | 0.887838 | 1.00E-72 | -1.69E-46 |
| MS.gene055909 | MS.gene83251 | 0.856867 | 2.41E-62 | -1.69E-46 |
| MS.gene055911 | MS.gene83251 | 0.854831 | 9.47E-62 | -1.69E-46 |
| MS.gene055941 | MS.gene83251 | 0.834759 | 2.49E-56 | -1.69E-46 |
| MS.gene05601 | MS.gene83251 | 0.802439 | 5.61E-49 | -1.69E-46 |
| MS.gene056040 | MS.gene83251 | 0.875369 | 3.25E-68 | -1.69E-46 |
| MS.gene056046 | MS.gene83251 | 0.844552 | 7.04E-59 | -1.69E-46 |
| MS.gene056166 | MS.gene83251 | 0.922186 | 1.36E-88 | -1.69E-46 |
| MS.gene056374 | MS.gene83251 | 0.812431 | 4.26E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene83251 | 0.84544 | 4.06E-59 | -1.69E-46 |
| MS.gene056422 | MS.gene83251 | 0.889471 | 2.35E-73 | -1.69E-46 |
| MS.gene056446 | MS.gene83251 | 0.882635 | 8.83E-71 | -1.69E-46 |
| MS.gene056448 | MS.gene83251 | 0.853425 | 2.41E-61 | -1.69E-46 |
| MS.gene056504 | MS.gene83251 | 0.900438 | 7.32E-78 | -1.69E-46 |
| MS.gene056510 | MS.gene83251 | 0.864399 | 1.25E-64 | -1.69E-46 |
| MS.gene056511 | MS.gene83251 | 0.828658 | 7.95E-55 | -1.69E-46 |
| MS.gene05664 | MS.gene83251 | 0.810984 | 8.78E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene83251 | 0.853041 | 3.11E-61 | -1.69E-46 |
| MS.gene05666 | MS.gene83251 | 0.833053 | 6.65E-56 | -1.69E-46 |
| MS.gene056692 | MS.gene83251 | 0.809188 | 2.14E-50 | -1.69E-46 |
| MS.gene056878 | MS.gene83251 | 0.84811 | 7.55E-60 | -1.69E-46 |
| MS.gene056947 | MS.gene83251 | 0.813183 | 2.91E-51 | -1.69E-46 |
| MS.gene057019 | MS.gene83251 | 0.85888 | 6.08E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene83251 | 0.870047 | 1.96E-66 | -1.69E-46 |
| MS.gene057086 | MS.gene83251 | 0.891102 | 5.40E-74 | -1.69E-46 |
| MS.gene057331 | MS.gene83251 | 0.847773 | 9.36E-60 | -1.69E-46 |
| MS.gene057416 | MS.gene83251 | 0.830277 | 3.21E-55 | -1.69E-46 |
| MS.gene057658 | MS.gene83251 | 0.810478 | 1.13E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene83251 | 0.873691 | 1.21E-67 | -1.69E-46 |
| MS.gene057831 | MS.gene83251 | 0.831477 | 1.63E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene83251 | 0.812977 | 3.23E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene83251 | 0.815694 | 8.11E-52 | -1.69E-46 |
| MS.gene057876 | MS.gene83251 | 0.840164 | 1.03E-57 | -1.69E-46 |
| MS.gene05787 | MS.gene83251 | 0.909072 | 8.53E-82 | -1.69E-46 |
| MS.gene058120 | MS.gene83251 | 0.844055 | 9.58E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene83251 | 0.872306 | 3.52E-67 | -1.69E-46 |
| MS.gene058157 | MS.gene83251 | 0.857047 | 2.13E-62 | -1.69E-46 |
| MS.gene058171 | MS.gene83251 | -0.802849 | 4.61E-49 | -1.69E-46 |
| MS.gene058173 | MS.gene83251 | -0.807966 | 3.90E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene83251 | -0.806627 | 7.51E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene83251 | 0.838059 | 3.60E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene83251 | 0.90261 | 8.13E-79 | -1.69E-46 |
| MS.gene058419 | MS.gene83251 | 0.845881 | 3.08E-59 | -1.69E-46 |
| MS.gene058420 | MS.gene83251 | 0.804237 | 2.38E-49 | -1.69E-46 |
| MS.gene058544 | MS.gene83251 | 0.837944 | 3.85E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene83251 | 0.813161 | 2.94E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene83251 | 0.839748 | 1.32E-57 | -1.69E-46 |
| MS.gene058838 | MS.gene83251 | 0.850161 | 2.03E-60 | -1.69E-46 |
| MS.gene058948 | MS.gene83251 | 0.833485 | 5.19E-56 | -1.69E-46 |
| MS.gene059022 | MS.gene83251 | 0.838746 | 2.39E-57 | -1.69E-46 |
| MS.gene059023 | MS.gene83251 | 0.858837 | 6.26E-63 | -1.69E-46 |
| MS.gene059129 | MS.gene83251 | 0.805709 | 1.17E-49 | -1.69E-46 |
| MS.gene05913 | MS.gene83251 | 0.856668 | 2.75E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene83251 | 0.847606 | 1.04E-59 | -1.69E-46 |
| MS.gene05934 | MS.gene83251 | 0.811001 | 8.71E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene83251 | 0.895788 | 6.87E-76 | -1.69E-46 |
| MS.gene059368 | MS.gene83251 | 0.868108 | 8.34E-66 | -1.69E-46 |
| MS.gene059455 | MS.gene83251 | 0.801756 | 7.75E-49 | -1.69E-46 |
| MS.gene059517 | MS.gene83251 | 0.853445 | 2.38E-61 | -1.69E-46 |
| MS.gene059667 | MS.gene83251 | 0.913125 | 8.84E-84 | -1.69E-46 |
| MS.gene059677 | MS.gene83251 | 0.811929 | 5.48E-51 | -1.69E-46 |
| MS.gene059680 | MS.gene83251 | 0.865476 | 5.75E-65 | -1.69E-46 |
| MS.gene059711 | MS.gene83251 | 0.806618 | 7.54E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene83251 | 0.857619 | 1.44E-62 | -1.69E-46 |
| MS.gene059801 | MS.gene83251 | 0.821581 | 3.74E-53 | -1.69E-46 |
| MS.gene059837 | MS.gene83251 | 0.844266 | 8.41E-59 | -1.69E-46 |
| MS.gene059865 | MS.gene83251 | 0.89425 | 2.94E-75 | -1.69E-46 |
| MS.gene05995 | MS.gene83251 | 0.805293 | 1.43E-49 | -1.69E-46 |
| MS.gene05996 | MS.gene83251 | 0.806661 | 7.38E-50 | -1.69E-46 |
| MS.gene06000 | MS.gene83251 | 0.889282 | 2.78E-73 | -1.69E-46 |
| MS.gene06027 | MS.gene83251 | 0.811394 | 7.16E-51 | -1.69E-46 |
| MS.gene060295 | MS.gene83251 | 0.802237 | 6.17E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene83251 | 0.8794 | 1.29E-69 | -1.69E-46 |
| MS.gene060482 | MS.gene83251 | 0.874366 | 7.15E-68 | -1.69E-46 |
| MS.gene060593 | MS.gene83251 | -0.819715 | 1.00E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene83251 | -0.818485 | 1.91E-52 | -1.69E-46 |
| MS.gene060703 | MS.gene83251 | 0.817061 | 4.01E-52 | -1.69E-46 |
| MS.gene060762 | MS.gene83251 | 0.835703 | 1.44E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene83251 | 0.903606 | 2.92E-79 | -1.69E-46 |
| MS.gene06077 | MS.gene83251 | 0.872979 | 2.10E-67 | -1.69E-46 |
| MS.gene060804 | MS.gene83251 | 0.807312 | 5.38E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene83251 | 0.882356 | 1.12E-70 | -1.69E-46 |
| MS.gene060837 | MS.gene83251 | 0.864462 | 1.20E-64 | -1.69E-46 |
| MS.gene06092 | MS.gene83251 | 0.85251 | 4.40E-61 | -1.69E-46 |
| MS.gene06097 | MS.gene83251 | 0.902373 | 1.04E-78 | -1.69E-46 |
| MS.gene060982 | MS.gene83251 | 0.898629 | 4.40E-77 | -1.69E-46 |
| MS.gene061150 | MS.gene83251 | 0.800984 | 1.12E-48 | -1.69E-46 |
| MS.gene061218 | MS.gene83251 | 0.804024 | 2.63E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83251.t1 | MTR_4g032805 | 96.371 | 248 | 8 | 1 | 1 | 248 | 23 | 269 | 0.0 | 498 |
| MS.gene83251.t1 | MTR_2g097690 | 50.000 | 62 | 29 | 1 | 109 | 170 | 77 | 136 | 3.52e-12 | 63.9 |
| MS.gene83251.t1 | MTR_5g022180 | 36.264 | 91 | 55 | 2 | 87 | 176 | 53 | 141 | 7.03e-12 | 62.4 |
| MS.gene83251.t1 | MTR_2g097690 | 50.000 | 64 | 30 | 1 | 107 | 170 | 75 | 136 | 1.34e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene83251.t1 | AT4G09350 | 59.389 | 229 | 82 | 3 | 20 | 247 | 28 | 246 | 8.25e-96 | 281 |
| MS.gene83251.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 2.68e-11 | 62.4 |
| MS.gene83251.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.21e-11 | 61.6 |
| MS.gene83251.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.21e-11 | 61.6 |
| MS.gene83251.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.88e-11 | 61.2 |
| MS.gene83251.t1 | AT5G59610 | 49.231 | 65 | 31 | 1 | 105 | 169 | 71 | 133 | 6.88e-11 | 61.2 |
Find 39 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCACCCAAAAGCTTCTT+AGG | 0.196506 | 4.3:-67598451 | None:intergenic |
| CTACTATTCAATCCAATCTT+AGG | 0.223430 | 4.3:+67598217 | MS.gene83251:CDS |
| GAATATTTGTGCAGATTCTT+AGG | 0.256272 | 4.3:+67599178 | MS.gene83251:intron |
| TCTTATTCTTCTTATTGTTT+TGG | 0.269689 | 4.3:-67598245 | None:intergenic |
| GGAGAAACCTAAGAAGCTTT+TGG | 0.298843 | 4.3:+67598444 | MS.gene83251:CDS |
| TGCATTTGTTTGTTGCTGTT+TGG | 0.332246 | 4.3:-67598419 | None:intergenic |
| ATTGCTTCTACATCAGCTTC+TGG | 0.336747 | 4.3:-67599208 | None:intergenic |
| GCAAGTTCATGCTTCTACTA+AGG | 0.365942 | 4.3:+67598309 | MS.gene83251:CDS |
| GAAACTGAAAATAAAATTAG+AGG | 0.366458 | 4.3:+67599411 | MS.gene83251:CDS |
| AGAGGGAGTGAAGTTGTGTC+TGG | 0.393350 | 4.3:-67599268 | None:intergenic |
| AAGCAATCAAAGTAGCATTC+AGG | 0.395851 | 4.3:+67599224 | MS.gene83251:CDS |
| AAAGTAGAAGATTCTATGAT+TGG | 0.404469 | 4.3:+67599353 | MS.gene83251:CDS |
| TTCTTCAAGGCTACCTCATA+AGG | 0.409509 | 4.3:-67599436 | None:intergenic |
| CAAACTGTAGTGAGAGTTTG+AGG | 0.431351 | 4.3:-67598287 | None:intergenic |
| GGATTGAATAGTAGAATTTG+TGG | 0.442017 | 4.3:-67598208 | None:intergenic |
| AACAGGTTCATAATTCTTCA+AGG | 0.442631 | 4.3:-67599449 | None:intergenic |
| CCAAGACGATCAACCATGTC+TGG | 0.451377 | 4.3:-67599472 | None:intergenic |
| CGATCAACCATGTCTGGAAC+AGG | 0.460674 | 4.3:-67599466 | None:intergenic |
| GATGATGAAGGTTGGATTGG+AGG | 0.480496 | 4.3:+67598391 | MS.gene83251:CDS |
| AATAGTAGAATTTGTGGAGA+AGG | 0.498829 | 4.3:-67598202 | None:intergenic |
| AAAATTAGAGGATCCTTATG+AGG | 0.498846 | 4.3:+67599423 | MS.gene83251:CDS |
| TACATGAGTGATACAGCATA+TGG | 0.500284 | 4.3:-67599566 | None:intergenic |
| AATGATGATGAAGGTTGGAT+TGG | 0.510553 | 4.3:+67598388 | MS.gene83251:CDS |
| TGGATTCTTGTGTCAACTCC+AGG | 0.515932 | 4.3:-67598358 | None:intergenic |
| GGGAGAATGATGATGAAGGT+TGG | 0.524754 | 4.3:+67598383 | MS.gene83251:CDS |
| CTTCATCATCATTCTCCCAA+TGG | 0.525735 | 4.3:-67598378 | None:intergenic |
| GACTTGCAACTTCTTGAGCA+AGG | 0.527830 | 4.3:-67599378 | None:intergenic |
| GACATGGTTGATCGTCTTGG+TGG | 0.530101 | 4.3:+67599475 | MS.gene83251:CDS |
| CCAGACATGGTTGATCGTCT+TGG | 0.532935 | 4.3:+67599472 | MS.gene83251:CDS |
| AGTTGACACAAGAATCCATT+GGG | 0.545872 | 4.3:+67598363 | MS.gene83251:CDS |
| TTATGAACCTGTTCCAGACA+TGG | 0.570153 | 4.3:+67599459 | MS.gene83251:CDS |
| ACTTGCAACTTCTTGAGCAA+GGG | 0.574767 | 4.3:-67599377 | None:intergenic |
| AGCATTCAGGAAACTTTCAA+AGG | 0.585269 | 4.3:+67599237 | MS.gene83251:CDS |
| ACATGGTTGATCGTCTTGGT+GGG | 0.606623 | 4.3:+67599476 | MS.gene83251:CDS |
| CATTGGGAGAATGATGATGA+AGG | 0.623650 | 4.3:+67598379 | MS.gene83251:CDS |
| GAGTTGACACAAGAATCCAT+TGG | 0.644255 | 4.3:+67598362 | MS.gene83251:CDS |
| ACAGCAACAAACAAATGCAG+AGG | 0.656916 | 4.3:+67598423 | MS.gene83251:CDS |
| GCTTCTACTAAGGACACTCA+AGG | 0.674014 | 4.3:+67598319 | MS.gene83251:CDS |
| ATTCTTGTGTCAACTCCAGG+TGG | 0.739348 | 4.3:-67598355 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGAAGAATAAGATTTTTT+AGG | + | chr4.3:67598254-67598273 | MS.gene83251:CDS | 15.0% |
| !!! | TAGTTTAAAATTGAATTTCA+AGG | - | chr4.3:67598608-67598627 | None:intergenic | 15.0% |
| !! | GAAACTGAAAATAAAATTAG+AGG | + | chr4.3:67599411-67599430 | MS.gene83251:CDS | 20.0% |
| !!! | ATTAAATTCTGTTTTTCTTC+AGG | + | chr4.3:67599026-67599045 | MS.gene83251:intron | 20.0% |
| !!! | CGTTTTAAAAAAAGAAAAAC+TGG | + | chr4.3:67599069-67599088 | MS.gene83251:intron | 20.0% |
| !!! | TAATTTCATGAATTTTTCTG+AGG | - | chr4.3:67599302-67599321 | None:intergenic | 20.0% |
| !!! | TCTTATTCTTCTTATTGTTT+TGG | - | chr4.3:67598248-67598267 | None:intergenic | 20.0% |
| !!! | TTTATACTTTTTGTAGGAAA+CGG | - | chr4.3:67598532-67598551 | None:intergenic | 20.0% |
| ! | AAAGTAGAAGATTCTATGAT+TGG | + | chr4.3:67599353-67599372 | MS.gene83251:CDS | 25.0% |
| ! | AGACTAAAACAACTATTAGT+CGG | + | chr4.3:67598861-67598880 | MS.gene83251:intron | 25.0% |
| !! | TTATTTTCAGTTTCTCTTGT+TGG | - | chr4.3:67599405-67599424 | None:intergenic | 25.0% |
| !!! | TGGTGTTTTATACTTTTTGT+AGG | - | chr4.3:67598538-67598557 | None:intergenic | 25.0% |
| AAAATTAGAGGATCCTTATG+AGG | + | chr4.3:67599423-67599442 | MS.gene83251:CDS | 30.0% | |
| AACAGGTTCATAATTCTTCA+AGG | - | chr4.3:67599452-67599471 | None:intergenic | 30.0% | |
| AATAGTAGAATTTGTGGAGA+AGG | - | chr4.3:67598205-67598224 | None:intergenic | 30.0% | |
| AGTTCGTATAAGTATGTGTT+TGG | + | chr4.3:67598629-67598648 | MS.gene83251:intron | 30.0% | |
| ATGTCAGAGTTTGATCAAAA+AGG | - | chr4.3:67598896-67598915 | None:intergenic | 30.0% | |
| CTACTATTCAATCCAATCTT+AGG | + | chr4.3:67598217-67598236 | MS.gene83251:CDS | 30.0% | |
| GAATATTTGTGCAGATTCTT+AGG | + | chr4.3:67599178-67599197 | MS.gene83251:intron | 30.0% | |
| GGATTGAATAGTAGAATTTG+TGG | - | chr4.3:67598211-67598230 | None:intergenic | 30.0% | |
| GGCAAAATTCAGTTTACAAT+CGG | - | chr4.3:67598587-67598606 | None:intergenic | 30.0% | |
| TCAGCTAATGTTGAATAGTT+TGG | + | chr4.3:67598809-67598828 | MS.gene83251:intron | 30.0% | |
| TGACAAGAGTTACTGAATAA+TGG | + | chr4.3:67599156-67599175 | MS.gene83251:intron | 30.0% | |
| TGATCAAACTCTGACATAAT+CGG | + | chr4.3:67598899-67598918 | MS.gene83251:intron | 30.0% | |
| TTTCTCATGATACAAATCTC+TGG | - | chr4.3:67599121-67599140 | None:intergenic | 30.0% | |
| ! | AACCACTTCGATTTTCTATT+AGG | + | chr4.3:67598560-67598579 | MS.gene83251:intron | 30.0% |
| ! | ACATAATCGGTACATGTTTT+GGG | + | chr4.3:67598912-67598931 | MS.gene83251:intron | 30.0% |
| ! | AGTTATACTTAGTGCTCTTT+TGG | - | chr4.3:67598781-67598800 | None:intergenic | 30.0% |
| ! | CGGTGGTTTTTATAAAATCA+CGG | - | chr4.3:67598752-67598771 | None:intergenic | 30.0% |
| ! | CGTGATTTTATAAAAACCAC+CGG | + | chr4.3:67598750-67598769 | MS.gene83251:intron | 30.0% |
| ! | TAGAAAATCGAAGTGGTTTT+TGG | - | chr4.3:67598558-67598577 | None:intergenic | 30.0% |
| AAGCAATCAAAGTAGCATTC+AGG | + | chr4.3:67599224-67599243 | MS.gene83251:CDS | 35.0% | |
| AGCATTCAGGAAACTTTCAA+AGG | + | chr4.3:67599237-67599256 | MS.gene83251:CDS | 35.0% | |
| AGTTGACACAAGAATCCATT+GGG | + | chr4.3:67598363-67598382 | MS.gene83251:CDS | 35.0% | |
| ATCTCTGGTAACTAGTAAGT+TGG | - | chr4.3:67599106-67599125 | None:intergenic | 35.0% | |
| GACCTAATAGAAAATCGAAG+TGG | - | chr4.3:67598565-67598584 | None:intergenic | 35.0% | |
| TACATGAGTGATACAGCATA+TGG | - | chr4.3:67599569-67599588 | None:intergenic | 35.0% | |
| TACGACTTGAGTTCAATTGT+TGG | + | chr4.3:67598833-67598852 | MS.gene83251:intron | 35.0% | |
| ! | AATGATGATGAAGGTTGGAT+TGG | + | chr4.3:67598388-67598407 | MS.gene83251:CDS | 35.0% |
| ! | GACATAATCGGTACATGTTT+TGG | + | chr4.3:67598911-67598930 | MS.gene83251:intron | 35.0% |
| ! | GAGAAACCTAAGAAGCTTTT+GGG | + | chr4.3:67598445-67598464 | MS.gene83251:CDS | 35.0% |
| ! | TGCATTTGTTTGTTGCTGTT+TGG | - | chr4.3:67598422-67598441 | None:intergenic | 35.0% |
| !! | AAAGCTTGCTTTTGTAGCTT+CGG | - | chr4.3:67598709-67598728 | None:intergenic | 35.0% |
| !!! | GCTGATTTGCTCAATTTTCA+AGG | + | chr4.3:67598478-67598497 | MS.gene83251:CDS | 35.0% |
| !!! | GTTTTGGTGTTTCCTAAGAT+TGG | - | chr4.3:67598232-67598251 | None:intergenic | 35.0% |
| !!! | TGTTTGGACTAGCTTTTACA+AGG | + | chr4.3:67598645-67598664 | MS.gene83251:intron | 35.0% |
| !!! | TTTCTGAGGCTGTTTTTAGA+GGG | - | chr4.3:67599288-67599307 | None:intergenic | 35.0% |
| !!! | TTTTCTGAGGCTGTTTTTAG+AGG | - | chr4.3:67599289-67599308 | None:intergenic | 35.0% |
| ACAGCAACAAACAAATGCAG+AGG | + | chr4.3:67598423-67598442 | MS.gene83251:CDS | 40.0% | |
| ACTTGCAACTTCTTGAGCAA+GGG | - | chr4.3:67599380-67599399 | None:intergenic | 40.0% | |
| ATTGCTTCTACATCAGCTTC+TGG | - | chr4.3:67599211-67599230 | None:intergenic | 40.0% | |
| CAAACTGTAGTGAGAGTTTG+AGG | - | chr4.3:67598290-67598309 | None:intergenic | 40.0% | |
| CTTCATCATCATTCTCCCAA+TGG | - | chr4.3:67598381-67598400 | None:intergenic | 40.0% | |
| GAGTTGACACAAGAATCCAT+TGG | + | chr4.3:67598362-67598381 | MS.gene83251:CDS | 40.0% | |
| GCAAGTTCATGCTTCTACTA+AGG | + | chr4.3:67598309-67598328 | MS.gene83251:CDS | 40.0% | |
| TCTTCACCCAAAAGCTTCTT+AGG | - | chr4.3:67598454-67598473 | None:intergenic | 40.0% | |
| TTATGAACCTGTTCCAGACA+TGG | + | chr4.3:67599459-67599478 | MS.gene83251:CDS | 40.0% | |
| TTCTTCAAGGCTACCTCATA+AGG | - | chr4.3:67599439-67599458 | None:intergenic | 40.0% | |
| ! | CATTGGGAGAATGATGATGA+AGG | + | chr4.3:67598379-67598398 | MS.gene83251:CDS | 40.0% |
| ! | GGAGAAACCTAAGAAGCTTT+TGG | + | chr4.3:67598444-67598463 | MS.gene83251:CDS | 40.0% |
| !! | AAGCTTGCTTTTGTAGCTTC+GGG | - | chr4.3:67598708-67598727 | None:intergenic | 40.0% |
| !! | TTTTCACGTATAGCTTGCCT+CGG | - | chr4.3:67598684-67598703 | None:intergenic | 40.0% |
| !!! | TAGTGCTCTTTTGGTTTAGC+CGG | - | chr4.3:67598772-67598791 | None:intergenic | 40.0% |
| ACATGGTTGATCGTCTTGGT+GGG | + | chr4.3:67599476-67599495 | MS.gene83251:CDS | 45.0% | |
| ATTCTTGTGTCAACTCCAGG+TGG | - | chr4.3:67598358-67598377 | None:intergenic | 45.0% | |
| GACTTGCAACTTCTTGAGCA+AGG | - | chr4.3:67599381-67599400 | None:intergenic | 45.0% | |
| GCTTCTACTAAGGACACTCA+AGG | + | chr4.3:67598319-67598338 | MS.gene83251:CDS | 45.0% | |
| TGGATTCTTGTGTCAACTCC+AGG | - | chr4.3:67598361-67598380 | None:intergenic | 45.0% | |
| ! | GATGATGAAGGTTGGATTGG+AGG | + | chr4.3:67598391-67598410 | MS.gene83251:CDS | 45.0% |
| ! | GGGAGAATGATGATGAAGGT+TGG | + | chr4.3:67598383-67598402 | MS.gene83251:CDS | 45.0% |
| ! | TTTCACGTATAGCTTGCCTC+GGG | - | chr4.3:67598683-67598702 | None:intergenic | 45.0% |
| AAGGCAAATATCACGTCCCG+AGG | + | chr4.3:67598664-67598683 | MS.gene83251:intron | 50.0% | |
| AGAGGGAGTGAAGTTGTGTC+TGG | - | chr4.3:67599271-67599290 | None:intergenic | 50.0% | |
| CCAAGACGATCAACCATGTC+TGG | - | chr4.3:67599475-67599494 | None:intergenic | 50.0% | |
| CCAGACATGGTTGATCGTCT+TGG | + | chr4.3:67599472-67599491 | MS.gene83251:CDS | 50.0% | |
| GACATGGTTGATCGTCTTGG+TGG | + | chr4.3:67599475-67599494 | MS.gene83251:CDS | 50.0% | |
| ! | CGATCAACCATGTCTGGAAC+AGG | - | chr4.3:67599469-67599488 | None:intergenic | 50.0% |
| !! | ACTCCAGGTGGTGCTTTTTG+TGG | - | chr4.3:67598346-67598365 | None:intergenic | 50.0% |
| !!! | TGCTCTTTTGGTTTAGCCGG+TGG | - | chr4.3:67598769-67598788 | None:intergenic | 50.0% |
| !! | GGACCACAAAAAGCACCACC+TGG | + | chr4.3:67598340-67598359 | MS.gene83251:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 67598184 | 67599609 | 67598184 | ID=MS.gene83251 |
| chr4.3 | mRNA | 67598184 | 67599609 | 67598184 | ID=MS.gene83251.t1;Parent=MS.gene83251 |
| chr4.3 | exon | 67598184 | 67598512 | 67598184 | ID=MS.gene83251.t1.exon1;Parent=MS.gene83251.t1 |
| chr4.3 | CDS | 67598184 | 67598512 | 67598184 | ID=cds.MS.gene83251.t1;Parent=MS.gene83251.t1 |
| chr4.3 | exon | 67599192 | 67599609 | 67599192 | ID=MS.gene83251.t1.exon2;Parent=MS.gene83251.t1 |
| chr4.3 | CDS | 67599192 | 67599609 | 67599192 | ID=cds.MS.gene83251.t1;Parent=MS.gene83251.t1 |
| Gene Sequence |
| Protein sequence |
