Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81988.t1 | XP_003602198.1 | 98.2 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 8.60E-278 | 965.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81988.t1 | Q9ZNX9 | 57.1 | 517 | 219 | 1 | 1 | 514 | 1 | 517 | 4.5e-150 | 532.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81988.t1 | G7J6R7 | 98.2 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 6.2e-278 | 965.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene81988 | 0.835203 | 1.92E-56 | -1.69E-46 |
MS.gene049222 | MS.gene81988 | 0.829137 | 6.09E-55 | -1.69E-46 |
MS.gene049232 | MS.gene81988 | 0.891757 | 2.97E-74 | -1.69E-46 |
MS.gene049285 | MS.gene81988 | 0.832298 | 1.02E-55 | -1.69E-46 |
MS.gene049320 | MS.gene81988 | 0.842172 | 3.04E-58 | -1.69E-46 |
MS.gene049369 | MS.gene81988 | 0.806563 | 7.74E-50 | -1.69E-46 |
MS.gene049396 | MS.gene81988 | 0.880026 | 7.70E-70 | -1.69E-46 |
MS.gene049600 | MS.gene81988 | 0.814948 | 1.19E-51 | -1.69E-46 |
MS.gene049609 | MS.gene81988 | 0.832554 | 8.85E-56 | -1.69E-46 |
MS.gene049633 | MS.gene81988 | 0.856895 | 2.36E-62 | -1.69E-46 |
MS.gene049656 | MS.gene81988 | 0.803462 | 3.45E-49 | -1.69E-46 |
MS.gene05010 | MS.gene81988 | 0.857505 | 1.56E-62 | -1.69E-46 |
MS.gene050170 | MS.gene81988 | 0.908461 | 1.67E-81 | -1.69E-46 |
MS.gene050216 | MS.gene81988 | 0.854921 | 8.92E-62 | -1.69E-46 |
MS.gene050323 | MS.gene81988 | 0.925931 | 9.38E-91 | -1.69E-46 |
MS.gene050381 | MS.gene81988 | -0.817659 | 2.94E-52 | -1.69E-46 |
MS.gene050496 | MS.gene81988 | 0.895057 | 1.38E-75 | -1.69E-46 |
MS.gene050499 | MS.gene81988 | 0.816756 | 4.69E-52 | -1.69E-46 |
MS.gene050502 | MS.gene81988 | 0.912115 | 2.82E-83 | -1.69E-46 |
MS.gene050504 | MS.gene81988 | 0.858831 | 6.29E-63 | -1.69E-46 |
MS.gene050518 | MS.gene81988 | 0.811966 | 5.37E-51 | -1.69E-46 |
MS.gene050577 | MS.gene81988 | 0.83443 | 3.01E-56 | -1.69E-46 |
MS.gene050612 | MS.gene81988 | 0.85788 | 1.21E-62 | -1.69E-46 |
MS.gene050662 | MS.gene81988 | 0.806273 | 8.91E-50 | -1.69E-46 |
MS.gene050675 | MS.gene81988 | 0.84714 | 1.40E-59 | -1.69E-46 |
MS.gene050697 | MS.gene81988 | 0.897432 | 1.41E-76 | -1.69E-46 |
MS.gene050699 | MS.gene81988 | 0.804883 | 1.74E-49 | -1.69E-46 |
MS.gene050747 | MS.gene81988 | 0.820905 | 5.36E-53 | -1.69E-46 |
MS.gene050772 | MS.gene81988 | 0.846225 | 2.48E-59 | -1.69E-46 |
MS.gene05080 | MS.gene81988 | 0.869712 | 2.52E-66 | -1.69E-46 |
MS.gene05081 | MS.gene81988 | 0.811761 | 5.96E-51 | -1.69E-46 |
MS.gene050868 | MS.gene81988 | 0.902668 | 7.66E-79 | -1.69E-46 |
MS.gene050871 | MS.gene81988 | 0.90534 | 4.76E-80 | -1.69E-46 |
MS.gene050904 | MS.gene81988 | 0.82449 | 7.85E-54 | -1.69E-46 |
MS.gene050950 | MS.gene81988 | 0.819975 | 8.76E-53 | -1.69E-46 |
MS.gene050986 | MS.gene81988 | 0.858212 | 9.62E-63 | -1.69E-46 |
MS.gene051127 | MS.gene81988 | -0.816158 | 6.39E-52 | -1.69E-46 |
MS.gene051138 | MS.gene81988 | -0.80988 | 1.52E-50 | -1.69E-46 |
MS.gene05118 | MS.gene81988 | 0.81431 | 1.64E-51 | -1.69E-46 |
MS.gene051268 | MS.gene81988 | 0.890782 | 7.22E-74 | -1.69E-46 |
MS.gene051317 | MS.gene81988 | 0.830049 | 3.65E-55 | -1.69E-46 |
MS.gene051509 | MS.gene81988 | 0.889925 | 1.56E-73 | -1.69E-46 |
MS.gene051551 | MS.gene81988 | 0.826775 | 2.25E-54 | -1.69E-46 |
MS.gene051651 | MS.gene81988 | -0.826132 | 3.21E-54 | -1.69E-46 |
MS.gene051734 | MS.gene81988 | 0.850568 | 1.56E-60 | -1.69E-46 |
MS.gene051838 | MS.gene81988 | 0.851256 | 9.99E-61 | -1.69E-46 |
MS.gene051874 | MS.gene81988 | 0.848278 | 6.79E-60 | -1.69E-46 |
MS.gene051941 | MS.gene81988 | 0.850447 | 1.69E-60 | -1.69E-46 |
MS.gene052066 | MS.gene81988 | 0.854022 | 1.62E-61 | -1.69E-46 |
MS.gene052100 | MS.gene81988 | 0.830439 | 2.93E-55 | -1.69E-46 |
MS.gene052164 | MS.gene81988 | 0.882687 | 8.45E-71 | -1.69E-46 |
MS.gene052346 | MS.gene81988 | 0.807392 | 5.17E-50 | -1.69E-46 |
MS.gene052414 | MS.gene81988 | 0.818384 | 2.02E-52 | -1.69E-46 |
MS.gene052482 | MS.gene81988 | 0.847884 | 8.72E-60 | -1.69E-46 |
MS.gene052486 | MS.gene81988 | 0.845644 | 3.57E-59 | -1.69E-46 |
MS.gene052503 | MS.gene81988 | 0.843619 | 1.25E-58 | -1.69E-46 |
MS.gene052504 | MS.gene81988 | 0.828438 | 8.99E-55 | -1.69E-46 |
MS.gene052506 | MS.gene81988 | 0.840137 | 1.04E-57 | -1.69E-46 |
MS.gene052822 | MS.gene81988 | 0.851069 | 1.13E-60 | -1.69E-46 |
MS.gene052823 | MS.gene81988 | 0.845335 | 4.33E-59 | -1.69E-46 |
MS.gene052825 | MS.gene81988 | 0.83387 | 4.16E-56 | -1.69E-46 |
MS.gene052872 | MS.gene81988 | 0.817974 | 2.50E-52 | -1.69E-46 |
MS.gene052966 | MS.gene81988 | 0.861257 | 1.17E-63 | -1.69E-46 |
MS.gene053203 | MS.gene81988 | 0.85042 | 1.72E-60 | -1.69E-46 |
MS.gene053213 | MS.gene81988 | 0.810043 | 1.40E-50 | -1.69E-46 |
MS.gene053286 | MS.gene81988 | 0.816161 | 6.38E-52 | -1.69E-46 |
MS.gene053420 | MS.gene81988 | -0.836426 | 9.43E-57 | -1.69E-46 |
MS.gene053436 | MS.gene81988 | 0.823286 | 1.50E-53 | -1.69E-46 |
MS.gene053449 | MS.gene81988 | 0.806783 | 6.95E-50 | -1.69E-46 |
MS.gene053479 | MS.gene81988 | 0.841081 | 5.90E-58 | -1.69E-46 |
MS.gene053480 | MS.gene81988 | 0.824275 | 8.81E-54 | -1.69E-46 |
MS.gene053505 | MS.gene81988 | 0.829887 | 4.00E-55 | -1.69E-46 |
MS.gene053574 | MS.gene81988 | 0.8732 | 1.77E-67 | -1.69E-46 |
MS.gene053626 | MS.gene81988 | 0.861716 | 8.43E-64 | -1.69E-46 |
MS.gene053633 | MS.gene81988 | 0.840795 | 7.01E-58 | -1.69E-46 |
MS.gene053824 | MS.gene81988 | 0.875715 | 2.48E-68 | -1.69E-46 |
MS.gene053889 | MS.gene81988 | 0.801349 | 9.39E-49 | -1.69E-46 |
MS.gene053912 | MS.gene81988 | 0.811659 | 6.27E-51 | -1.69E-46 |
MS.gene053916 | MS.gene81988 | 0.851778 | 7.11E-61 | -1.69E-46 |
MS.gene054003 | MS.gene81988 | 0.814355 | 1.61E-51 | -1.69E-46 |
MS.gene054408 | MS.gene81988 | 0.807072 | 6.04E-50 | -1.69E-46 |
MS.gene054595 | MS.gene81988 | 0.856905 | 2.34E-62 | -1.69E-46 |
MS.gene054600 | MS.gene81988 | 0.80356 | 3.29E-49 | -1.69E-46 |
MS.gene054642 | MS.gene81988 | 0.808916 | 2.45E-50 | -1.69E-46 |
MS.gene054706 | MS.gene81988 | -0.830889 | 2.28E-55 | -1.69E-46 |
MS.gene05470 | MS.gene81988 | 0.850018 | 2.23E-60 | -1.69E-46 |
MS.gene05494 | MS.gene81988 | 0.876674 | 1.16E-68 | -1.69E-46 |
MS.gene054954 | MS.gene81988 | 0.863438 | 2.49E-64 | -1.69E-46 |
MS.gene05505 | MS.gene81988 | 0.80245 | 5.58E-49 | -1.69E-46 |
MS.gene055224 | MS.gene81988 | 0.857781 | 1.29E-62 | -1.69E-46 |
MS.gene055362 | MS.gene81988 | 0.830125 | 3.50E-55 | -1.69E-46 |
MS.gene055502 | MS.gene81988 | 0.831274 | 1.83E-55 | -1.69E-46 |
MS.gene055577 | MS.gene81988 | 0.852834 | 3.56E-61 | -1.69E-46 |
MS.gene055722 | MS.gene81988 | 0.82882 | 7.27E-55 | -1.69E-46 |
MS.gene055741 | MS.gene81988 | 0.822806 | 1.95E-53 | -1.69E-46 |
MS.gene055744 | MS.gene81988 | 0.812546 | 4.02E-51 | -1.69E-46 |
MS.gene055748 | MS.gene81988 | 0.859849 | 3.11E-63 | -1.69E-46 |
MS.gene055750 | MS.gene81988 | 0.877921 | 4.26E-69 | -1.69E-46 |
MS.gene055751 | MS.gene81988 | 0.874355 | 7.21E-68 | -1.69E-46 |
MS.gene055776 | MS.gene81988 | 0.870139 | 1.83E-66 | -1.69E-46 |
MS.gene05589 | MS.gene81988 | 0.918089 | 2.39E-86 | -1.69E-46 |
MS.gene055909 | MS.gene81988 | 0.802612 | 5.16E-49 | -1.69E-46 |
MS.gene055941 | MS.gene81988 | 0.80973 | 1.64E-50 | -1.69E-46 |
MS.gene055942 | MS.gene81988 | -0.806315 | 8.73E-50 | -1.69E-46 |
MS.gene056046 | MS.gene81988 | 0.84561 | 3.65E-59 | -1.69E-46 |
MS.gene056166 | MS.gene81988 | 0.86013 | 2.56E-63 | -1.69E-46 |
MS.gene056283 | MS.gene81988 | 0.820219 | 7.70E-53 | -1.69E-46 |
MS.gene056387 | MS.gene81988 | 0.902706 | 7.37E-79 | -1.69E-46 |
MS.gene056422 | MS.gene81988 | 0.837943 | 3.86E-57 | -1.69E-46 |
MS.gene056446 | MS.gene81988 | 0.846404 | 2.22E-59 | -1.69E-46 |
MS.gene056487 | MS.gene81988 | 0.81732 | 3.50E-52 | -1.69E-46 |
MS.gene056504 | MS.gene81988 | 0.922798 | 6.15E-89 | -1.69E-46 |
MS.gene056510 | MS.gene81988 | 0.861927 | 7.27E-64 | -1.69E-46 |
MS.gene056657 | MS.gene81988 | 0.839226 | 1.80E-57 | -1.69E-46 |
MS.gene05666 | MS.gene81988 | 0.806142 | 9.50E-50 | -1.69E-46 |
MS.gene056878 | MS.gene81988 | 0.839069 | 1.98E-57 | -1.69E-46 |
MS.gene057019 | MS.gene81988 | 0.827641 | 1.40E-54 | -1.69E-46 |
MS.gene057076 | MS.gene81988 | 0.837144 | 6.18E-57 | -1.69E-46 |
MS.gene057086 | MS.gene81988 | 0.89623 | 4.50E-76 | -1.69E-46 |
MS.gene05753 | MS.gene81988 | 0.807868 | 4.10E-50 | -1.69E-46 |
MS.gene057687 | MS.gene81988 | 0.810326 | 1.22E-50 | -1.69E-46 |
MS.gene057734 | MS.gene81988 | 0.825802 | 3.84E-54 | -1.69E-46 |
MS.gene057857 | MS.gene81988 | 0.802808 | 4.71E-49 | -1.69E-46 |
MS.gene057872 | MS.gene81988 | 0.807768 | 4.30E-50 | -1.69E-46 |
MS.gene05787 | MS.gene81988 | 0.865538 | 5.49E-65 | -1.69E-46 |
MS.gene058099 | MS.gene81988 | -0.812568 | 3.97E-51 | -1.69E-46 |
MS.gene058109 | MS.gene81988 | -0.800898 | 1.16E-48 | -1.69E-46 |
MS.gene058120 | MS.gene81988 | 0.813256 | 2.81E-51 | -1.69E-46 |
MS.gene058130 | MS.gene81988 | 0.823234 | 1.55E-53 | -1.69E-46 |
MS.gene058157 | MS.gene81988 | 0.840757 | 7.17E-58 | -1.69E-46 |
MS.gene058171 | MS.gene81988 | -0.842506 | 2.48E-58 | -1.69E-46 |
MS.gene058173 | MS.gene81988 | -0.841718 | 4.01E-58 | -1.69E-46 |
MS.gene058175 | MS.gene81988 | -0.848861 | 4.68E-60 | -1.69E-46 |
MS.gene058268 | MS.gene81988 | -0.80864 | 2.80E-50 | -1.69E-46 |
MS.gene058269 | MS.gene81988 | -0.803618 | 3.20E-49 | -1.69E-46 |
MS.gene058334 | MS.gene81988 | -0.809438 | 1.89E-50 | -1.69E-46 |
MS.gene058338 | MS.gene81988 | 0.834555 | 2.80E-56 | -1.69E-46 |
MS.gene05837 | MS.gene81988 | 0.845215 | 4.67E-59 | -1.69E-46 |
MS.gene058419 | MS.gene81988 | 0.828994 | 6.60E-55 | -1.69E-46 |
MS.gene058459 | MS.gene81988 | 0.81844 | 1.96E-52 | -1.69E-46 |
MS.gene058723 | MS.gene81988 | 0.804079 | 2.57E-49 | -1.69E-46 |
MS.gene058773 | MS.gene81988 | 0.818057 | 2.39E-52 | -1.69E-46 |
MS.gene058838 | MS.gene81988 | 0.846741 | 1.79E-59 | -1.69E-46 |
MS.gene058978 | MS.gene81988 | -0.846513 | 2.07E-59 | -1.69E-46 |
MS.gene059022 | MS.gene81988 | 0.848373 | 6.39E-60 | -1.69E-46 |
MS.gene059023 | MS.gene81988 | 0.8462 | 2.52E-59 | -1.69E-46 |
MS.gene059037 | MS.gene81988 | -0.8093 | 2.03E-50 | -1.69E-46 |
MS.gene059045 | MS.gene81988 | -0.836879 | 7.23E-57 | -1.69E-46 |
MS.gene059129 | MS.gene81988 | 0.814151 | 1.78E-51 | -1.69E-46 |
MS.gene05913 | MS.gene81988 | 0.873352 | 1.57E-67 | -1.69E-46 |
MS.gene059305 | MS.gene81988 | 0.843855 | 1.08E-58 | -1.69E-46 |
MS.gene059367 | MS.gene81988 | 0.884759 | 1.46E-71 | -1.69E-46 |
MS.gene059368 | MS.gene81988 | 0.829001 | 6.57E-55 | -1.69E-46 |
MS.gene059517 | MS.gene81988 | 0.820295 | 7.40E-53 | -1.69E-46 |
MS.gene059667 | MS.gene81988 | 0.891494 | 3.77E-74 | -1.69E-46 |
MS.gene059677 | MS.gene81988 | 0.815858 | 7.45E-52 | -1.69E-46 |
MS.gene059680 | MS.gene81988 | 0.854626 | 1.09E-61 | -1.69E-46 |
MS.gene059699 | MS.gene81988 | -0.803947 | 2.73E-49 | -1.69E-46 |
MS.gene059703 | MS.gene81988 | -0.821111 | 4.80E-53 | -1.69E-46 |
MS.gene059718 | MS.gene81988 | 0.82184 | 3.26E-53 | -1.69E-46 |
MS.gene059837 | MS.gene81988 | 0.826567 | 2.53E-54 | -1.69E-46 |
MS.gene059865 | MS.gene81988 | 0.92161 | 2.87E-88 | -1.69E-46 |
MS.gene06000 | MS.gene81988 | 0.889632 | 2.04E-73 | -1.69E-46 |
MS.gene06027 | MS.gene81988 | 0.808918 | 2.45E-50 | -1.69E-46 |
MS.gene060372 | MS.gene81988 | 0.845663 | 3.53E-59 | -1.69E-46 |
MS.gene060482 | MS.gene81988 | 0.850427 | 1.71E-60 | -1.69E-46 |
MS.gene060593 | MS.gene81988 | -0.815712 | 8.03E-52 | -1.69E-46 |
MS.gene060595 | MS.gene81988 | -0.828059 | 1.11E-54 | -1.69E-46 |
MS.gene060703 | MS.gene81988 | 0.830713 | 2.51E-55 | -1.69E-46 |
MS.gene060762 | MS.gene81988 | 0.859135 | 5.10E-63 | -1.69E-46 |
MS.gene060778 | MS.gene81988 | 0.92179 | 2.27E-88 | -1.69E-46 |
MS.gene06077 | MS.gene81988 | 0.864768 | 9.59E-65 | -1.69E-46 |
MS.gene060835 | MS.gene81988 | 0.839793 | 1.28E-57 | -1.69E-46 |
MS.gene06097 | MS.gene81988 | 0.891552 | 3.58E-74 | -1.69E-46 |
MS.gene060982 | MS.gene81988 | 0.917581 | 4.46E-86 | -1.69E-46 |
MS.gene061044 | MS.gene81988 | -0.804718 | 1.89E-49 | -1.69E-46 |
MS.gene061218 | MS.gene81988 | 0.862052 | 6.66E-64 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene030874 | MS.gene81988 | PPI |
MS.gene81988 | MS.gene57358 | PPI |
MS.gene81988 | MS.gene47969 | PPI |
MS.gene81988 | MS.gene27999 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81988.t1 | MTR_3g090900 | 98.249 | 514 | 9 | 0 | 1 | 514 | 1 | 514 | 0.0 | 1030 |
MS.gene81988.t1 | MTR_3g090900 | 97.351 | 453 | 12 | 0 | 1 | 453 | 1 | 453 | 0.0 | 902 |
MS.gene81988.t1 | MTR_3g090900 | 97.514 | 362 | 9 | 0 | 1 | 362 | 1 | 362 | 0.0 | 724 |
MS.gene81988.t1 | MTR_3g118290 | 28.819 | 288 | 200 | 3 | 229 | 514 | 287 | 571 | 3.57e-33 | 133 |
MS.gene81988.t1 | MTR_7g101840 | 31.000 | 300 | 202 | 4 | 216 | 513 | 257 | 553 | 4.40e-32 | 130 |
MS.gene81988.t1 | MTR_1g063850 | 28.819 | 288 | 200 | 3 | 216 | 501 | 261 | 545 | 1.53e-29 | 122 |
MS.gene81988.t1 | MTR_0172s0030 | 30.565 | 301 | 181 | 10 | 222 | 505 | 204 | 493 | 1.91e-23 | 103 |
MS.gene81988.t1 | MTR_3g033420 | 32.394 | 213 | 140 | 3 | 305 | 514 | 192 | 403 | 5.11e-19 | 89.7 |
MS.gene81988.t1 | MTR_1g007370 | 25.954 | 262 | 180 | 6 | 256 | 513 | 296 | 547 | 7.86e-17 | 84.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene81988.t1 | AT5G24120 | 61.877 | 522 | 186 | 5 | 1 | 514 | 1 | 517 | 0.0 | 625 |
MS.gene81988.t1 | AT5G24120 | 61.877 | 522 | 186 | 5 | 1 | 514 | 1 | 517 | 0.0 | 625 |
MS.gene81988.t1 | AT5G24120 | 61.877 | 522 | 186 | 5 | 1 | 514 | 1 | 517 | 0.0 | 625 |
MS.gene81988.t1 | AT2G36990 | 31.333 | 300 | 201 | 3 | 216 | 513 | 247 | 543 | 1.57e-35 | 139 |
MS.gene81988.t1 | AT1G08540 | 30.903 | 288 | 194 | 3 | 229 | 514 | 285 | 569 | 3.72e-34 | 136 |
MS.gene81988.t1 | AT5G13730 | 27.532 | 316 | 197 | 9 | 215 | 512 | 113 | 414 | 4.27e-21 | 95.9 |
MS.gene81988.t1 | AT1G64860 | 28.094 | 299 | 191 | 8 | 222 | 505 | 202 | 491 | 1.14e-20 | 95.5 |
MS.gene81988.t1 | AT1G64860 | 28.497 | 193 | 130 | 4 | 222 | 410 | 202 | 390 | 6.69e-16 | 80.9 |
MS.gene81988.t1 | AT3G53920 | 25.614 | 285 | 196 | 7 | 237 | 513 | 293 | 569 | 3.15e-14 | 75.9 |
Find 111 sgRNAs with CRISPR-Local
Find 233 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTACATCACGGTATCTTTC+AGG | 0.229998 | 3.2:-76713202 | None:intergenic |
AGAAGATTGACGAACTTCTA+AGG | 0.267064 | 3.2:+76711170 | MS.gene81988:CDS |
CCGTTAACGGTAGCATTTAA+AGG | 0.276378 | 3.2:+76710698 | MS.gene81988:CDS |
AAGAGGATTTAAACAGTGAT+AGG | 0.297201 | 3.2:+76711020 | MS.gene81988:CDS |
CCTTTAAATGCTACCGTTAA+CGG | 0.304115 | 3.2:-76710698 | None:intergenic |
GAGACAGCTCTTGGTTTCTT+AGG | 0.309175 | 3.2:-76710827 | None:intergenic |
TTGAGCCAAACCGGAGATTT+CGG | 0.320769 | 3.2:+76712487 | MS.gene81988:CDS |
AATGAGCTTCTCACCTTCAT+TGG | 0.323733 | 3.2:-76711298 | None:intergenic |
ATACTCAGTACCGGCTGATT+TGG | 0.341811 | 3.2:+76711195 | MS.gene81988:CDS |
CTCATCAAGATTCATCCGTT+TGG | 0.343384 | 3.2:-76711068 | None:intergenic |
GTAAATCATCTTTCACTTGA+AGG | 0.343761 | 3.2:-76711761 | None:intergenic |
AGCTTCTCACGTGTTCCCTT+TGG | 0.354929 | 3.2:+76712570 | MS.gene81988:CDS |
GTCTTGAATGCAGTGATAGA+AGG | 0.357509 | 3.2:-76713240 | None:intergenic |
GTTGATGATGGTGGTGTTGA+TGG | 0.360239 | 3.2:+76713298 | MS.gene81988:CDS |
CCTAGAGATGTTCAAGTTTG+AGG | 0.363298 | 3.2:-76714102 | None:intergenic |
CTTTGTCAGGCTGGAGTTAA+GGG | 0.363815 | 3.2:+76712441 | MS.gene81988:CDS |
TTTCAACCTACAGTCTGTTT+TGG | 0.364864 | 3.2:+76712511 | MS.gene81988:CDS |
TCTTTGTCAGGCTGGAGTTA+AGG | 0.368656 | 3.2:+76712440 | MS.gene81988:CDS |
TCCTCAGTGGAGACAGCTCT+TGG | 0.384406 | 3.2:-76710836 | None:intergenic |
TGCAAGAAATAAGCTAATAA+AGG | 0.388641 | 3.2:+76711881 | MS.gene81988:CDS |
ATCAATGGGGTTGTTGATGA+TGG | 0.389488 | 3.2:+76713286 | MS.gene81988:CDS |
TGCTCCGAAGAAGGCAGAAC+TGG | 0.403451 | 3.2:-76711250 | None:intergenic |
ACCTCCAGTTCTGCCTTCTT+CGG | 0.405115 | 3.2:+76711246 | MS.gene81988:CDS |
ATAATCTGCATCACATATAT+CGG | 0.410715 | 3.2:-76710939 | None:intergenic |
CTTGAACATCTCTAGGGAAA+TGG | 0.415901 | 3.2:+76714109 | MS.gene81988:CDS |
AGACAGAGGTTTGGACTTGA+TGG | 0.418320 | 3.2:+76714050 | MS.gene81988:CDS |
CAGCCAAGACGCACAAGAAA+AGG | 0.419331 | 3.2:+76710783 | MS.gene81988:CDS |
CCTCAAACTTGAACATCTCT+AGG | 0.422830 | 3.2:+76714102 | MS.gene81988:CDS |
TCTATTATTTCTTCCTCCGT+TGG | 0.435604 | 3.2:-76713163 | None:intergenic |
AATCTTCTCAATTCTACTCC+TGG | 0.438326 | 3.2:-76711155 | None:intergenic |
GGTAAGGGTGACAGAACTTT+GGG | 0.439878 | 3.2:+76714071 | MS.gene81988:CDS |
TTTCAAGATCTTTGTCAGGC+TGG | 0.460093 | 3.2:+76712432 | MS.gene81988:CDS |
CGCAAGAAGAGTTTATCAAT+GGG | 0.461379 | 3.2:+76713272 | MS.gene81988:CDS |
GAAAGCCGAAATCTCCGGTT+TGG | 0.463173 | 3.2:-76712492 | None:intergenic |
TTGGTGATCAGACAGAGGTT+TGG | 0.464083 | 3.2:+76714041 | MS.gene81988:CDS |
TGACAAAGATCTTGAAACCT+TGG | 0.467823 | 3.2:-76712426 | None:intergenic |
CTGATCACCAAGTTCTCCTT+AGG | 0.468005 | 3.2:-76714029 | None:intergenic |
GCTCAAGCATTCAGCTCGAT+TGG | 0.469057 | 3.2:+76714163 | MS.gene81988:CDS |
AAGGTTTCAAGATCTTTGTC+AGG | 0.472724 | 3.2:+76712428 | MS.gene81988:CDS |
TGGTAAGGGTGACAGAACTT+TGG | 0.477364 | 3.2:+76714070 | MS.gene81988:CDS |
ATCTTCTCAATTCTACTCCT+GGG | 0.478589 | 3.2:-76711154 | None:intergenic |
ATAACTCAATCTTAGCTCTT+CGG | 0.481173 | 3.2:-76713120 | None:intergenic |
TCAAGTAAAGAAAGCAATAG+AGG | 0.482166 | 3.2:+76711848 | MS.gene81988:CDS |
CATCACATATATCGGTTGTC+GGG | 0.482870 | 3.2:-76710931 | None:intergenic |
TTACATCACGGTATCTTTCA+GGG | 0.483805 | 3.2:-76713201 | None:intergenic |
TGTATTGAAGAGACCGTTAA+CGG | 0.487228 | 3.2:+76710685 | MS.gene81988:CDS |
CTGATTTGGTCAGTCTAGAC+TGG | 0.488397 | 3.2:+76711209 | MS.gene81988:CDS |
GCATCACATATATCGGTTGT+CGG | 0.491957 | 3.2:-76710932 | None:intergenic |
TAATCCACATCCAATGAAGA+TGG | 0.497477 | 3.2:-76710866 | None:intergenic |
TCTCGAAGGGGTAAGAAGAT+TGG | 0.504636 | 3.2:+76710986 | MS.gene81988:CDS |
GAAGGCAACCTGCTCTACTA+AGG | 0.506636 | 3.2:+76713329 | MS.gene81988:CDS |
AGAGCAAGCCTTAGTAGAGC+AGG | 0.510037 | 3.2:-76713337 | None:intergenic |
GTTAACGGTCTCTTCAATAC+AGG | 0.512611 | 3.2:-76710683 | None:intergenic |
ACGCAAGAAGAGTTTATCAA+TGG | 0.515058 | 3.2:+76713271 | MS.gene81988:CDS |
TGAGAAGCTTGCGAGGGTCA+TGG | 0.515197 | 3.2:-76712556 | None:intergenic |
AGATGATTTACAGAAGGAGC+TGG | 0.516579 | 3.2:+76711773 | MS.gene81988:CDS |
GATTGGTGATGTAAGTAAAG+AGG | 0.522341 | 3.2:+76711003 | MS.gene81988:CDS |
GAGGTTTGGACTTGATGGTA+AGG | 0.523710 | 3.2:+76714055 | MS.gene81988:CDS |
CTGTTTCAAGCTCAGCTGCT+CGG | 0.525455 | 3.2:+76710621 | MS.gene81988:CDS |
GACAAAGATCTTGAAACCTT+GGG | 0.527279 | 3.2:-76712425 | None:intergenic |
GTAAAGAAAGCAATAGAGGT+TGG | 0.531566 | 3.2:+76711852 | MS.gene81988:CDS |
TCTGAAGCCTAAGGAGAACT+TGG | 0.533811 | 3.2:+76714022 | MS.gene81988:CDS |
TCTTGAATGCAGTGATAGAA+GGG | 0.536462 | 3.2:-76713239 | None:intergenic |
GAAGATTGACGAACTTCTAA+GGG | 0.538367 | 3.2:+76711171 | MS.gene81988:CDS |
GCTTGATTCTCTGAAGCCTA+AGG | 0.542662 | 3.2:+76714013 | MS.gene81988:intron |
CTCAAACTTGAACATCTCTA+GGG | 0.544621 | 3.2:+76714103 | MS.gene81988:CDS |
AGTTATCATTTCAGCTTCAG+AGG | 0.545216 | 3.2:+76713137 | MS.gene81988:CDS |
ACCAGAAAACAAAAGCCAAA+CGG | 0.546934 | 3.2:+76711053 | MS.gene81988:CDS |
CAAGTTGATGCAACCAATGA+AGG | 0.548325 | 3.2:+76711285 | MS.gene81988:CDS |
GGAGCTGGAAAGAGAGCCTA+CGG | 0.552589 | 3.2:+76711788 | MS.gene81988:CDS |
AAGATACCGTGATGTAATGA+AGG | 0.553790 | 3.2:+76713207 | MS.gene81988:CDS |
TGTTCCCTTTGGACTTGAGT+CGG | 0.554834 | 3.2:+76712581 | MS.gene81988:CDS |
AATGGGGTTGTTGATGATGG+TGG | 0.565643 | 3.2:+76713289 | MS.gene81988:CDS |
AGAGGATTTAAACAGTGATA+GGG | 0.568935 | 3.2:+76711021 | MS.gene81988:CDS |
AGTGAAAGATGATTTACAGA+AGG | 0.573532 | 3.2:+76711767 | MS.gene81988:CDS |
TCAGCTGCTCGGACTCCACT+AGG | 0.575229 | 3.2:+76710632 | MS.gene81988:CDS |
CATACCGACTCAAGTCCAAA+GGG | 0.580195 | 3.2:-76712585 | None:intergenic |
GGTGAGAAAGCACGAAGTCA+AGG | 0.585592 | 3.2:+76714130 | MS.gene81988:CDS |
GAACACGTGAGAAGCTTGCG+AGG | 0.589931 | 3.2:-76712563 | None:intergenic |
AGGTTGAAAGCCGAAATCTC+CGG | 0.593857 | 3.2:-76712497 | None:intergenic |
GTGTTGATGGCGATAACAGA+AGG | 0.598234 | 3.2:+76713311 | MS.gene81988:CDS |
GATCAAAAGAGTCTCTCGAA+GGG | 0.598531 | 3.2:+76710973 | MS.gene81988:CDS |
AACTTTGTATTCAATCCTAG+TGG | 0.599283 | 3.2:-76710647 | None:intergenic |
AGGTTTGGACTTGATGGTAA+GGG | 0.603110 | 3.2:+76714056 | MS.gene81988:CDS |
TCAGCTATTTCATCCTCCGT+AGG | 0.604604 | 3.2:-76711804 | None:intergenic |
TCTAAGGGAATACTCAGTAC+CGG | 0.605704 | 3.2:+76711186 | MS.gene81988:CDS |
AGCTTGCGAGGGTCATGGAA+CGG | 0.606319 | 3.2:-76712551 | None:intergenic |
ACATACCGACTCAAGTCCAA+AGG | 0.607252 | 3.2:-76712586 | None:intergenic |
TTGATGCCTTCATTACATCA+CGG | 0.616848 | 3.2:-76713213 | None:intergenic |
TACATCACGGTATCTTTCAG+GGG | 0.616885 | 3.2:-76713200 | None:intergenic |
AACGGATGAATCTTGATGAG+AGG | 0.617893 | 3.2:+76711071 | MS.gene81988:CDS |
ATTGATAAACTCTTCTTGCG+TGG | 0.621610 | 3.2:-76713269 | None:intergenic |
AGATCAAAAGAGTCTCTCGA+AGG | 0.624213 | 3.2:+76710972 | MS.gene81988:CDS |
TCTTATCCAAAACAGACTGT+AGG | 0.625554 | 3.2:-76712517 | None:intergenic |
AAGGCTTGCTCTTGATGATG+TGG | 0.625750 | 3.2:+76713348 | MS.gene81988:CDS |
GTGAAGATGTCATTCCAACT+CGG | 0.626818 | 3.2:+76711119 | MS.gene81988:CDS |
TAAACAGAATGACACAGCGT+TGG | 0.627600 | 3.2:+76710724 | MS.gene81988:CDS |
CTTGAATGCAGTGATAGAAG+GGG | 0.628428 | 3.2:-76713238 | None:intergenic |
TCCGAAGAAGGCAGAACTGG+AGG | 0.632944 | 3.2:-76711247 | None:intergenic |
TCAGCTTCAGAGGTCACCAA+CGG | 0.634098 | 3.2:+76713147 | MS.gene81988:CDS |
GGATTTAAACAGTGATAGGG+TGG | 0.634412 | 3.2:+76711024 | MS.gene81988:CDS |
TGATCACGAACAAGACAAGC+CGG | 0.636977 | 3.2:-76712374 | None:intergenic |
TCTAGACTGACCAAATCAGC+CGG | 0.641619 | 3.2:-76711205 | None:intergenic |
ATCAAAAGAGTCTCTCGAAG+GGG | 0.655049 | 3.2:+76710974 | MS.gene81988:CDS |
AACACGTGAGAAGCTTGCGA+GGG | 0.668557 | 3.2:-76712562 | None:intergenic |
ACGGTCTCTTCAATACAGGA+TGG | 0.670415 | 3.2:-76710679 | None:intergenic |
GCTTCAGAGGTCACCAACGG+AGG | 0.677471 | 3.2:+76713150 | MS.gene81988:CDS |
AGAACTTGGTGATCAGACAG+AGG | 0.691541 | 3.2:+76714036 | MS.gene81988:CDS |
GCAAGAAGAGTTTATCAATG+GGG | 0.710931 | 3.2:+76713273 | MS.gene81988:CDS |
ACCAAGAGCTGTCTCCACTG+AGG | 0.712371 | 3.2:+76710835 | MS.gene81988:CDS |
GCTGGAAAGAGAGCCTACGG+AGG | 0.718077 | 3.2:+76711791 | MS.gene81988:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATTGTGAAATATCATT+AGG | + | chr3.2:76713531-76713550 | MS.gene81988:intron | 15.0% |
!! | CAATTTATTACAATACATAT+AGG | - | chr3.2:76712771-76712790 | None:intergenic | 15.0% |
!! | TTACATCAATAATTAAGAAA+TGG | + | chr3.2:76712322-76712341 | MS.gene81988:intron | 15.0% |
!!! | TTTGTATATATTTTCAAGTA+TGG | - | chr3.2:76710906-76710925 | None:intergenic | 15.0% |
!! | CAATGAAAATATTATTGGAT+CGG | - | chr3.2:76712949-76712968 | None:intergenic | 20.0% |
!! | GACTTTGTAATCTTTAAATT+TGG | + | chr3.2:76712263-76712282 | MS.gene81988:intron | 20.0% |
!! | TGAAATTCATGCATATAATA+TGG | + | chr3.2:76711534-76711553 | MS.gene81988:intron | 20.0% |
!! | TTTATTACAATACATATAGG+TGG | - | chr3.2:76712768-76712787 | None:intergenic | 20.0% |
!!! | AGATACATTTGTTAATTTTC+AGG | + | chr3.2:76711734-76711753 | MS.gene81988:intron | 20.0% |
! | AAAGTCATCAGAAATTTCAA+TGG | - | chr3.2:76712249-76712268 | None:intergenic | 25.0% |
! | AACAATATCACTAAAAAGAG+AGG | - | chr3.2:76712289-76712308 | None:intergenic | 25.0% |
! | ATAATCTGCATCACATATAT+CGG | - | chr3.2:76710942-76710961 | None:intergenic | 25.0% |
! | ATATGGTTTAATGAAACTGT+TGG | - | chr3.2:76713801-76713820 | None:intergenic | 25.0% |
! | ATGAACTTGATTGATTGATT+TGG | + | chr3.2:76713053-76713072 | MS.gene81988:intron | 25.0% |
! | CAACAATATTTCCAATATAG+TGG | + | chr3.2:76711662-76711681 | MS.gene81988:intron | 25.0% |
! | CAGTTTCATTAAACCATATT+TGG | + | chr3.2:76713802-76713821 | MS.gene81988:intron | 25.0% |
! | CATCAATAATTAAGAAATGG+TGG | + | chr3.2:76712325-76712344 | MS.gene81988:intron | 25.0% |
! | TATTGGAAATATTGTTGACA+TGG | - | chr3.2:76711659-76711678 | None:intergenic | 25.0% |
! | TATTGTAAACAGTGTACATT+AGG | + | chr3.2:76713445-76713464 | MS.gene81988:intron | 25.0% |
! | TGCAAGAAATAAGCTAATAA+AGG | + | chr3.2:76711881-76711900 | MS.gene81988:CDS | 25.0% |
! | TGGGATATTCAAAGAAAATA+TGG | + | chr3.2:76713004-76713023 | MS.gene81988:intron | 25.0% |
! | TTGGCCAATGAAAATATTAT+TGG | - | chr3.2:76712954-76712973 | None:intergenic | 25.0% |
!! | AAATTCGATTTGTGATACTT+CGG | + | chr3.2:76712805-76712824 | MS.gene81988:intron | 25.0% |
!! | ACTAAACATTGTTTCTCTTA+AGG | + | chr3.2:76713641-76713660 | MS.gene81988:intron | 25.0% |
!! | ATATTTTCTTTGAATATCCC+AGG | - | chr3.2:76713005-76713024 | None:intergenic | 25.0% |
!! | CGATCCAATAATATTTTCAT+TGG | + | chr3.2:76712947-76712966 | MS.gene81988:intron | 25.0% |
!! | GTTTTTAAATTGTGCGATTA+AGG | + | chr3.2:76713887-76713906 | MS.gene81988:intron | 25.0% |
!! | TATTTTCATTGGCCAATAAT+TGG | + | chr3.2:76712958-76712977 | MS.gene81988:intron | 25.0% |
!! | TGAACTTGATTGATTGATTT+GGG | + | chr3.2:76713054-76713073 | MS.gene81988:intron | 25.0% |
!!! | CTCTTTTTAGTGATATTGTT+TGG | + | chr3.2:76712289-76712308 | MS.gene81988:intron | 25.0% |
AAAACAATAATCAGCATGTG+TGG | - | chr3.2:76712625-76712644 | None:intergenic | 30.0% | |
AACATCATTGACCACTATAT+TGG | - | chr3.2:76711676-76711695 | None:intergenic | 30.0% | |
AACTTTGTATTCAATCCTAG+TGG | - | chr3.2:76710650-76710669 | None:intergenic | 30.0% | |
AAGAGGATTTAAACAGTGAT+AGG | + | chr3.2:76711020-76711039 | MS.gene81988:CDS | 30.0% | |
ACTACTATTGCTGTGAATAT+TGG | - | chr3.2:76712163-76712182 | None:intergenic | 30.0% | |
ACTAGTTCACATCTAATGAT+TGG | - | chr3.2:76713869-76713888 | None:intergenic | 30.0% | |
ACTATACAAGATTTAAGCCT+GGG | + | chr3.2:76712985-76713004 | MS.gene81988:intron | 30.0% | |
AGAGGATTTAAACAGTGATA+GGG | + | chr3.2:76711021-76711040 | MS.gene81988:CDS | 30.0% | |
AGTCAACTCAACTTATGATA+GGG | + | chr3.2:76712000-76712019 | MS.gene81988:intron | 30.0% | |
AGTGAAAGATGATTTACAGA+AGG | + | chr3.2:76711767-76711786 | MS.gene81988:CDS | 30.0% | |
AGTGTACATTAGGTATTTGT+TGG | + | chr3.2:76713455-76713474 | MS.gene81988:intron | 30.0% | |
AGTTGAGTTTACATGGTTAT+AGG | + | chr3.2:76712210-76712229 | MS.gene81988:intron | 30.0% | |
ATATAGTGGTCAATGATGTT+AGG | + | chr3.2:76711676-76711695 | MS.gene81988:intron | 30.0% | |
ATCAAACATTAGTTGCTAAG+AGG | - | chr3.2:76713975-76713994 | None:intergenic | 30.0% | |
ATCAGAAATTTCAATGGAAG+AGG | - | chr3.2:76712243-76712262 | None:intergenic | 30.0% | |
ATCTAACTAATGAGTTCTTC+TGG | + | chr3.2:76711973-76711992 | MS.gene81988:intron | 30.0% | |
CTAGTTCACATCTAATGATT+GGG | - | chr3.2:76713868-76713887 | None:intergenic | 30.0% | |
CTATAAATCATGTCTCATCA+AGG | - | chr3.2:76713835-76713854 | None:intergenic | 30.0% | |
CTATATCCTTCTAACTTTGA+TGG | + | chr3.2:76712123-76712142 | MS.gene81988:intron | 30.0% | |
CTGCTATTAAGAATTTAAGG+CGG | + | chr3.2:76713770-76713789 | MS.gene81988:intron | 30.0% | |
GAGTAAATTGAAAGAAAGTG+TGG | - | chr3.2:76711344-76711363 | None:intergenic | 30.0% | |
GATGTAAAAATAACTGCTGT+AGG | + | chr3.2:76712725-76712744 | MS.gene81988:intron | 30.0% | |
GGACTGCTATTAAGAATTTA+AGG | + | chr3.2:76713767-76713786 | MS.gene81988:intron | 30.0% | |
GTAAATCATCTTTCACTTGA+AGG | - | chr3.2:76711764-76711783 | None:intergenic | 30.0% | |
TAGTCAACTCAACTTATGAT+AGG | + | chr3.2:76711999-76712018 | MS.gene81988:intron | 30.0% | |
TATATGCATGAATTTCAGCA+TGG | - | chr3.2:76711531-76711550 | None:intergenic | 30.0% | |
TCAAACATTAGTTGCTAAGA+GGG | - | chr3.2:76713974-76713993 | None:intergenic | 30.0% | |
TCAACTTATGATAGGGATTT+AGG | + | chr3.2:76712007-76712026 | MS.gene81988:intron | 30.0% | |
TCAAGTAAAGAAAGCAATAG+AGG | + | chr3.2:76711848-76711867 | MS.gene81988:CDS | 30.0% | |
TGTATAGTCCTACCAATTAT+TGG | - | chr3.2:76712973-76712992 | None:intergenic | 30.0% | |
! | AATTCGATTTGTGATACTTC+GGG | + | chr3.2:76712806-76712825 | MS.gene81988:intron | 30.0% |
! | AGAGTATCTACAGTCATATT+TGG | + | chr3.2:76712084-76712103 | MS.gene81988:intron | 30.0% |
! | ATAACTCAATCTTAGCTCTT+CGG | - | chr3.2:76713123-76713142 | None:intergenic | 30.0% |
! | GGAAAATTTTCCATCTTCAT+TGG | + | chr3.2:76710856-76710875 | MS.gene81988:CDS | 30.0% |
! | TGTTCAATTCTTTTACAGCT+TGG | + | chr3.2:76711914-76711933 | MS.gene81988:intron | 30.0% |
!!! | GGTATCTTTTAATTTTGTGC+AGG | + | chr3.2:76713084-76713103 | MS.gene81988:intron | 30.0% |
AAATCATGTCTCATCAAGGA+AGG | - | chr3.2:76713831-76713850 | None:intergenic | 35.0% | |
AAGATACCGTGATGTAATGA+AGG | + | chr3.2:76713207-76713226 | MS.gene81988:CDS | 35.0% | |
AAGGTTTCAAGATCTTTGTC+AGG | + | chr3.2:76712428-76712447 | MS.gene81988:CDS | 35.0% | |
AATCTTCTCAATTCTACTCC+TGG | - | chr3.2:76711158-76711177 | None:intergenic | 35.0% | |
ACCAGAAAACAAAAGCCAAA+CGG | + | chr3.2:76711053-76711072 | MS.gene81988:CDS | 35.0% | |
ACCATGAAGTTGAGTTTACA+TGG | + | chr3.2:76712203-76712222 | MS.gene81988:intron | 35.0% | |
ACCATGTAAACTCAACTTCA+TGG | - | chr3.2:76712207-76712226 | None:intergenic | 35.0% | |
ACGCAAGAAGAGTTTATCAA+TGG | + | chr3.2:76713271-76713290 | MS.gene81988:CDS | 35.0% | |
AGAAGATTGACGAACTTCTA+AGG | + | chr3.2:76711170-76711189 | MS.gene81988:CDS | 35.0% | |
AGTCATATTTGGCGAATTCA+TGG | + | chr3.2:76712095-76712114 | MS.gene81988:intron | 35.0% | |
AGTTATCATTTCAGCTTCAG+AGG | + | chr3.2:76713137-76713156 | MS.gene81988:CDS | 35.0% | |
ATCTTCTCAATTCTACTCCT+GGG | - | chr3.2:76711157-76711176 | None:intergenic | 35.0% | |
ATTACATCACGGTATCTTTC+AGG | - | chr3.2:76713205-76713224 | None:intergenic | 35.0% | |
ATTGATAAACTCTTCTTGCG+TGG | - | chr3.2:76713272-76713291 | None:intergenic | 35.0% | |
CCTTTAAATGCTACCGTTAA+CGG | - | chr3.2:76710701-76710720 | None:intergenic | 35.0% | |
CGCAAGAAGAGTTTATCAAT+GGG | + | chr3.2:76713272-76713291 | MS.gene81988:CDS | 35.0% | |
CTCAAACTTGAACATCTCTA+GGG | + | chr3.2:76714103-76714122 | MS.gene81988:CDS | 35.0% | |
CTTGATAAGCAAGGAATTCA+AGG | + | chr3.2:76711624-76711643 | MS.gene81988:intron | 35.0% | |
GAAGATTGACGAACTTCTAA+GGG | + | chr3.2:76711171-76711190 | MS.gene81988:CDS | 35.0% | |
GACAAAGATCTTGAAACCTT+GGG | - | chr3.2:76712428-76712447 | None:intergenic | 35.0% | |
GACTATACAAGATTTAAGCC+TGG | + | chr3.2:76712984-76713003 | MS.gene81988:intron | 35.0% | |
GATGTTGGAGTATGCAATTA+AGG | + | chr3.2:76713710-76713729 | MS.gene81988:intron | 35.0% | |
GCAAGAAGAGTTTATCAATG+GGG | + | chr3.2:76713273-76713292 | MS.gene81988:CDS | 35.0% | |
GTAAAGAAAGCAATAGAGGT+TGG | + | chr3.2:76711852-76711871 | MS.gene81988:CDS | 35.0% | |
GTCATATTTGGCGAATTCAT+GGG | + | chr3.2:76712096-76712115 | MS.gene81988:intron | 35.0% | |
GTTTCTCCATCAAAGTTAGA+AGG | - | chr3.2:76712132-76712151 | None:intergenic | 35.0% | |
TAATCCACATCCAATGAAGA+TGG | - | chr3.2:76710869-76710888 | None:intergenic | 35.0% | |
TATCACGAGTTGCTAAAAGT+TGG | + | chr3.2:76713482-76713501 | MS.gene81988:intron | 35.0% | |
TCAACGATATCATACTTCCA+TGG | + | chr3.2:76713940-76713959 | MS.gene81988:intron | 35.0% | |
TCATATTTGGCGAATTCATG+GGG | + | chr3.2:76712097-76712116 | MS.gene81988:intron | 35.0% | |
TCTTATCCAAAACAGACTGT+AGG | - | chr3.2:76712520-76712539 | None:intergenic | 35.0% | |
TCTTGAATGCAGTGATAGAA+GGG | - | chr3.2:76713242-76713261 | None:intergenic | 35.0% | |
TGACAAAGATCTTGAAACCT+TGG | - | chr3.2:76712429-76712448 | None:intergenic | 35.0% | |
TGACTGTAGATACTCTATTG+AGG | - | chr3.2:76712080-76712099 | None:intergenic | 35.0% | |
TGTATTGAAGAGACCGTTAA+CGG | + | chr3.2:76710685-76710704 | MS.gene81988:CDS | 35.0% | |
TTACATCACGGTATCTTTCA+GGG | - | chr3.2:76713204-76713223 | None:intergenic | 35.0% | |
TTCAACCTAATGGCTTAAGT+TGG | + | chr3.2:76711410-76711429 | MS.gene81988:intron | 35.0% | |
TTCATTGGCCAATAATTGGT+AGG | + | chr3.2:76712962-76712981 | MS.gene81988:intron | 35.0% | |
TTGAAGGACGAATAAAGCAA+AGG | + | chr3.2:76711496-76711515 | MS.gene81988:intron | 35.0% | |
TTGATGCCTTCATTACATCA+CGG | - | chr3.2:76713216-76713235 | None:intergenic | 35.0% | |
TTTCTTCGCTAGAAATAGCA+GGG | + | chr3.2:76712834-76712853 | MS.gene81988:intron | 35.0% | |
! | AGATGGAAAATTTTCCTCAG+TGG | - | chr3.2:76710852-76710871 | None:intergenic | 35.0% |
! | GTTGTCGTAAACAGTTTTCT+CGG | - | chr3.2:76712697-76712716 | None:intergenic | 35.0% |
! | TCTATTATTTCTTCCTCCGT+TGG | - | chr3.2:76713166-76713185 | None:intergenic | 35.0% |
! | TTGTCGTAAACAGTTTTCTC+GGG | - | chr3.2:76712696-76712715 | None:intergenic | 35.0% |
! | TTTCAACCTACAGTCTGTTT+TGG | + | chr3.2:76712511-76712530 | MS.gene81988:CDS | 35.0% |
! | TTTTCCATCTTCATTGGATG+TGG | + | chr3.2:76710862-76710881 | MS.gene81988:CDS | 35.0% |
!! | GATTGGTGATGTAAGTAAAG+AGG | + | chr3.2:76711003-76711022 | MS.gene81988:CDS | 35.0% |
!!! | GGATTTCTTTTTTTCCGAGT+TGG | - | chr3.2:76711136-76711155 | None:intergenic | 35.0% |
!!! | TGGCTTTTGTTTTCTGGTTT+CGG | - | chr3.2:76711051-76711070 | None:intergenic | 35.0% |
AAAAATGCATGCTCCGAAGA+AGG | - | chr3.2:76711262-76711281 | None:intergenic | 40.0% | |
AACACACACAATGACGATGT+TGG | + | chr3.2:76713695-76713714 | MS.gene81988:intron | 40.0% | |
AACATCGTCATTGTGTGTGT+TGG | - | chr3.2:76713696-76713715 | None:intergenic | 40.0% | |
AACGGATGAATCTTGATGAG+AGG | + | chr3.2:76711071-76711090 | MS.gene81988:CDS | 40.0% | |
AATGAGCTTCTCACCTTCAT+TGG | - | chr3.2:76711301-76711320 | None:intergenic | 40.0% | |
ACATCGTCATTGTGTGTGTT+GGG | - | chr3.2:76713695-76713714 | None:intergenic | 40.0% | |
ACTTGCCAACTTAAGCCATT+AGG | - | chr3.2:76711418-76711437 | None:intergenic | 40.0% | |
ACTTTGATGGAGAAACTCGA+TGG | + | chr3.2:76712136-76712155 | MS.gene81988:intron | 40.0% | |
AGATCAAAAGAGTCTCTCGA+AGG | + | chr3.2:76710972-76710991 | MS.gene81988:CDS | 40.0% | |
AGATGATTTACAGAAGGAGC+TGG | + | chr3.2:76711773-76711792 | MS.gene81988:CDS | 40.0% | |
ATCAAAAGAGTCTCTCGAAG+GGG | + | chr3.2:76710974-76710993 | MS.gene81988:CDS | 40.0% | |
CAAGTAGCTGAGACTGAAAA+TGG | - | chr3.2:76712900-76712919 | None:intergenic | 40.0% | |
CCGTTAACGGTAGCATTTAA+AGG | + | chr3.2:76710698-76710717 | MS.gene81988:CDS | 40.0% | |
CCTCAAACTTGAACATCTCT+AGG | + | chr3.2:76714102-76714121 | MS.gene81988:CDS | 40.0% | |
CTCATCAAGATTCATCCGTT+TGG | - | chr3.2:76711071-76711090 | None:intergenic | 40.0% | |
CTCGGAAAAAAAGAAATCCC+AGG | + | chr3.2:76711137-76711156 | MS.gene81988:CDS | 40.0% | |
CTTGAATGCAGTGATAGAAG+GGG | - | chr3.2:76713241-76713260 | None:intergenic | 40.0% | |
CTTTCTTCGCTAGAAATAGC+AGG | + | chr3.2:76712833-76712852 | MS.gene81988:intron | 40.0% | |
GATCAAAAGAGTCTCTCGAA+GGG | + | chr3.2:76710973-76710992 | MS.gene81988:CDS | 40.0% | |
GCAAGAAGCTTTCAACCTAA+TGG | + | chr3.2:76711400-76711419 | MS.gene81988:intron | 40.0% | |
GGATTTAAACAGTGATAGGG+TGG | + | chr3.2:76711024-76711043 | MS.gene81988:CDS | 40.0% | |
GTCTTGAATGCAGTGATAGA+AGG | - | chr3.2:76713243-76713262 | None:intergenic | 40.0% | |
GTGAAGATGTCATTCCAACT+CGG | + | chr3.2:76711119-76711138 | MS.gene81988:CDS | 40.0% | |
GTTAACGGTCTCTTCAATAC+AGG | - | chr3.2:76710686-76710705 | None:intergenic | 40.0% | |
GTTGGAGTATGCAATTAAGG+CGG | + | chr3.2:76713713-76713732 | MS.gene81988:intron | 40.0% | |
TAAACAGAATGACACAGCGT+TGG | + | chr3.2:76710724-76710743 | MS.gene81988:CDS | 40.0% | |
TACATCACGGTATCTTTCAG+GGG | - | chr3.2:76713203-76713222 | None:intergenic | 40.0% | |
TCAAGGAAGGACACCAAATA+TGG | - | chr3.2:76713818-76713837 | None:intergenic | 40.0% | |
TCAGTCTCAGCTACTTGTAA+GGG | + | chr3.2:76712903-76712922 | MS.gene81988:intron | 40.0% | |
TCATTACACTTGCTCGAACT+TGG | - | chr3.2:76713605-76713624 | None:intergenic | 40.0% | |
TCTAAGGGAATACTCAGTAC+CGG | + | chr3.2:76711186-76711205 | MS.gene81988:CDS | 40.0% | |
TTCAGTCTCAGCTACTTGTA+AGG | + | chr3.2:76712902-76712921 | MS.gene81988:intron | 40.0% | |
TTTCAAGATCTTTGTCAGGC+TGG | + | chr3.2:76712432-76712451 | MS.gene81988:CDS | 40.0% | |
TTTCATGTTAACTCCCTCTG+AGG | + | chr3.2:76711466-76711485 | MS.gene81988:intron | 40.0% | |
! | AGGGATTTAGGACTGAGTAA+CGG | + | chr3.2:76712019-76712038 | MS.gene81988:intron | 40.0% |
! | AGGTTTGGACTTGATGGTAA+GGG | + | chr3.2:76714056-76714075 | MS.gene81988:CDS | 40.0% |
! | ATCAATGGGGTTGTTGATGA+TGG | + | chr3.2:76713286-76713305 | MS.gene81988:CDS | 40.0% |
! | ATCTTTTGCAGCACAATCTC+CGG | + | chr3.2:76712355-76712374 | MS.gene81988:intron | 40.0% |
! | CAGATTTTGCTAATAGCCCA+AGG | + | chr3.2:76712409-76712428 | MS.gene81988:CDS | 40.0% |
! | CATCACATATATCGGTTGTC+GGG | - | chr3.2:76710934-76710953 | None:intergenic | 40.0% |
! | CCTAGAGATGTTCAAGTTTG+AGG | - | chr3.2:76714105-76714124 | None:intergenic | 40.0% |
! | CTTGAACATCTCTAGGGAAA+TGG | + | chr3.2:76714109-76714128 | MS.gene81988:CDS | 40.0% |
! | GCATCACATATATCGGTTGT+CGG | - | chr3.2:76710935-76710954 | None:intergenic | 40.0% |
! | TATCCTTTTCTTGTGCGTCT+TGG | - | chr3.2:76710789-76710808 | None:intergenic | 40.0% |
!! | CAAGTTGATGCAACCAATGA+AGG | + | chr3.2:76711285-76711304 | MS.gene81988:CDS | 40.0% |
!! | CTGAGTAACGGTCATTTTCA+TGG | + | chr3.2:76712031-76712050 | MS.gene81988:intron | 40.0% |
!! | TGCTCTTGATGATGTGGTAA+TGG | + | chr3.2:76713354-76713373 | MS.gene81988:intron | 40.0% |
!! | TTGATCGTTTTGAGCCAAAC+CGG | + | chr3.2:76712478-76712497 | MS.gene81988:CDS | 40.0% |
!! | TTGATTGATTTGGGTGTGTC+TGG | + | chr3.2:76713063-76713082 | MS.gene81988:intron | 40.0% |
!!! | TCCGTTTGGCTTTTGTTTTC+TGG | - | chr3.2:76711057-76711076 | None:intergenic | 40.0% |
!!! | TTGGCTGTTTTAACTTGCGT+AGG | - | chr3.2:76710770-76710789 | None:intergenic | 40.0% |
ACGGTCTCTTCAATACAGGA+TGG | - | chr3.2:76710682-76710701 | None:intergenic | 45.0% | |
AGACAGAGGTTTGGACTTGA+TGG | + | chr3.2:76714050-76714069 | MS.gene81988:CDS | 45.0% | |
AGGTTGAAAGCCGAAATCTC+CGG | - | chr3.2:76712500-76712519 | None:intergenic | 45.0% | |
ATGCAATTAAGGCGGCCTAA+AGG | + | chr3.2:76713721-76713740 | MS.gene81988:intron | 45.0% | |
CTAAGAGGGACAAATGACCA+TGG | - | chr3.2:76713960-76713979 | None:intergenic | 45.0% | |
CTGATCACCAAGTTCTCCTT+AGG | - | chr3.2:76714032-76714051 | None:intergenic | 45.0% | |
CTTTGTCAGGCTGGAGTTAA+GGG | + | chr3.2:76712441-76712460 | MS.gene81988:CDS | 45.0% | |
GAGACAGCTCTTGGTTTCTT+AGG | - | chr3.2:76710830-76710849 | None:intergenic | 45.0% | |
GGTAAGGGTGACAGAACTTT+GGG | + | chr3.2:76714071-76714090 | MS.gene81988:CDS | 45.0% | |
TCTAGACTGACCAAATCAGC+CGG | - | chr3.2:76711208-76711227 | None:intergenic | 45.0% | |
TCTCGAAGGGGTAAGAAGAT+TGG | + | chr3.2:76710986-76711005 | MS.gene81988:CDS | 45.0% | |
TCTTTGTCAGGCTGGAGTTA+AGG | + | chr3.2:76712440-76712459 | MS.gene81988:CDS | 45.0% | |
TGATCACGAACAAGACAAGC+CGG | - | chr3.2:76712377-76712396 | None:intergenic | 45.0% | |
TGGTAAGGGTGACAGAACTT+TGG | + | chr3.2:76714070-76714089 | MS.gene81988:CDS | 45.0% | |
TGTTCCCTTTGGACTTGAGT+CGG | + | chr3.2:76712581-76712600 | MS.gene81988:CDS | 45.0% | |
TTCCAGCGACTTGATAAGCA+AGG | + | chr3.2:76711615-76711634 | MS.gene81988:intron | 45.0% | |
TTCCTTGCTTATCAAGTCGC+TGG | - | chr3.2:76711620-76711639 | None:intergenic | 45.0% | |
TTGAGCCAAACCGGAGATTT+CGG | + | chr3.2:76712487-76712506 | MS.gene81988:CDS | 45.0% | |
! | AGAACTTGGTGATCAGACAG+AGG | + | chr3.2:76714036-76714055 | MS.gene81988:CDS | 45.0% |
! | CTTCAAGTTCAGACCTCAGA+GGG | - | chr3.2:76711482-76711501 | None:intergenic | 45.0% |
! | GAGGTTTGGACTTGATGGTA+AGG | + | chr3.2:76714055-76714074 | MS.gene81988:CDS | 45.0% |
! | TCAGCTATTTCATCCTCCGT+AGG | - | chr3.2:76711807-76711826 | None:intergenic | 45.0% |
! | TCTGAAGCCTAAGGAGAACT+TGG | + | chr3.2:76714022-76714041 | MS.gene81988:CDS | 45.0% |
! | TTGGTGATCAGACAGAGGTT+TGG | + | chr3.2:76714041-76714060 | MS.gene81988:CDS | 45.0% |
!! | AAGGCTTGCTCTTGATGATG+TGG | + | chr3.2:76713348-76713367 | MS.gene81988:CDS | 45.0% |
!! | AATGGGGTTGTTGATGATGG+TGG | + | chr3.2:76713289-76713308 | MS.gene81988:CDS | 45.0% |
!! | ACATACCGACTCAAGTCCAA+AGG | - | chr3.2:76712589-76712608 | None:intergenic | 45.0% |
!! | ATACTCAGTACCGGCTGATT+TGG | + | chr3.2:76711195-76711214 | MS.gene81988:CDS | 45.0% |
!! | CATACCGACTCAAGTCCAAA+GGG | - | chr3.2:76712588-76712607 | None:intergenic | 45.0% |
!! | CTGATTTGGTCAGTCTAGAC+TGG | + | chr3.2:76711209-76711228 | MS.gene81988:CDS | 45.0% |
!! | GCTTGATTCTCTGAAGCCTA+AGG | + | chr3.2:76714013-76714032 | MS.gene81988:intron | 45.0% |
!! | GTGTTGATGGCGATAACAGA+AGG | + | chr3.2:76713311-76713330 | MS.gene81988:CDS | 45.0% |
!! | GTTGATGATGGTGGTGTTGA+TGG | + | chr3.2:76713298-76713317 | MS.gene81988:CDS | 45.0% |
!! | TGGCTTAAGTTGGCAAGTCA+AGG | + | chr3.2:76711420-76711439 | MS.gene81988:intron | 45.0% |
AACACGTGAGAAGCTTGCGA+GGG | - | chr3.2:76712565-76712584 | None:intergenic | 50.0% | |
ACCTCCAGTTCTGCCTTCTT+CGG | + | chr3.2:76711246-76711265 | MS.gene81988:CDS | 50.0% | |
AGAGCAAGCCTTAGTAGAGC+AGG | - | chr3.2:76713340-76713359 | None:intergenic | 50.0% | |
AGCTTCTCACGTGTTCCCTT+TGG | + | chr3.2:76712570-76712589 | MS.gene81988:CDS | 50.0% | |
CAGCCAAGACGCACAAGAAA+AGG | + | chr3.2:76710783-76710802 | MS.gene81988:CDS | 50.0% | |
CTGTTTCAAGCTCAGCTGCT+CGG | + | chr3.2:76710621-76710640 | MS.gene81988:CDS | 50.0% | |
GAAAGCCGAAATCTCCGGTT+TGG | - | chr3.2:76712495-76712514 | None:intergenic | 50.0% | |
GAAGGCAACCTGCTCTACTA+AGG | + | chr3.2:76713329-76713348 | MS.gene81988:CDS | 50.0% | |
GCTCAAGCATTCAGCTCGAT+TGG | + | chr3.2:76714163-76714182 | MS.gene81988:CDS | 50.0% | |
GTCATTGTGTGTGTTGGGTG+TGG | - | chr3.2:76713690-76713709 | None:intergenic | 50.0% | |
TCAGCTTCAGAGGTCACCAA+CGG | + | chr3.2:76713147-76713166 | MS.gene81988:CDS | 50.0% | |
! | CCTTCAAGTTCAGACCTCAG+AGG | - | chr3.2:76711483-76711502 | None:intergenic | 50.0% |
! | GGTGAGAAAGCACGAAGTCA+AGG | + | chr3.2:76714130-76714149 | MS.gene81988:CDS | 50.0% |
!! | CCTCTGAGGTCTGAACTTGA+AGG | + | chr3.2:76711480-76711499 | MS.gene81988:intron | 50.0% |
ACCAAGAGCTGTCTCCACTG+AGG | + | chr3.2:76710835-76710854 | MS.gene81988:CDS | 55.0% | |
AGCTTGCGAGGGTCATGGAA+CGG | - | chr3.2:76712554-76712573 | None:intergenic | 55.0% | |
CAGCCTTAGCTGAGGCCTTT+AGG | - | chr3.2:76713739-76713758 | None:intergenic | 55.0% | |
GAACACGTGAGAAGCTTGCG+AGG | - | chr3.2:76712566-76712585 | None:intergenic | 55.0% | |
GGAGCTGGAAAGAGAGCCTA+CGG | + | chr3.2:76711788-76711807 | MS.gene81988:CDS | 55.0% | |
TCCGAAGAAGGCAGAACTGG+AGG | - | chr3.2:76711250-76711269 | None:intergenic | 55.0% | |
TCCTCAGTGGAGACAGCTCT+TGG | - | chr3.2:76710839-76710858 | None:intergenic | 55.0% | |
TGAGAAGCTTGCGAGGGTCA+TGG | - | chr3.2:76712559-76712578 | None:intergenic | 55.0% | |
TGCTCCGAAGAAGGCAGAAC+TGG | - | chr3.2:76711253-76711272 | None:intergenic | 55.0% | |
ACCCCAAGCAGCCTTAGCTG+AGG | - | chr3.2:76713747-76713766 | None:intergenic | 60.0% | |
AGGCCTCAGCTAAGGCTGCT+TGG | + | chr3.2:76713741-76713760 | MS.gene81988:intron | 60.0% | |
CGGCCTAAAGGCCTCAGCTA+AGG | + | chr3.2:76713733-76713752 | MS.gene81988:intron | 60.0% | |
GCCTCAGCTAAGGCTGCTTG+GGG | + | chr3.2:76713743-76713762 | MS.gene81988:intron | 60.0% | |
GCTGGAAAGAGAGCCTACGG+AGG | + | chr3.2:76711791-76711810 | MS.gene81988:CDS | 60.0% | |
GCTTCAGAGGTCACCAACGG+AGG | + | chr3.2:76713150-76713169 | MS.gene81988:CDS | 60.0% | |
GGCCTCAGCTAAGGCTGCTT+GGG | + | chr3.2:76713742-76713761 | MS.gene81988:intron | 60.0% | |
TCAGCTAAGGCTGCTTGGGG+TGG | + | chr3.2:76713746-76713765 | MS.gene81988:intron | 60.0% | |
TCAGCTGCTCGGACTCCACT+AGG | + | chr3.2:76710632-76710651 | MS.gene81988:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 76710608 | 76714211 | 76710608 | ID=MS.gene81988 |
chr3.2 | mRNA | 76710608 | 76714211 | 76710608 | ID=MS.gene81988.t1;Parent=MS.gene81988 |
chr3.2 | exon | 76710608 | 76711306 | 76710608 | ID=MS.gene81988.t1.exon1;Parent=MS.gene81988.t1 |
chr3.2 | CDS | 76710608 | 76711306 | 76710608 | ID=cds.MS.gene81988.t1;Parent=MS.gene81988.t1 |
chr3.2 | exon | 76711756 | 76711902 | 76711756 | ID=MS.gene81988.t1.exon2;Parent=MS.gene81988.t1 |
chr3.2 | CDS | 76711756 | 76711902 | 76711756 | ID=cds.MS.gene81988.t1;Parent=MS.gene81988.t1 |
chr3.2 | exon | 76712366 | 76712602 | 76712366 | ID=MS.gene81988.t1.exon3;Parent=MS.gene81988.t1 |
chr3.2 | CDS | 76712366 | 76712602 | 76712366 | ID=cds.MS.gene81988.t1;Parent=MS.gene81988.t1 |
chr3.2 | exon | 76713106 | 76713369 | 76713106 | ID=MS.gene81988.t1.exon4;Parent=MS.gene81988.t1 |
chr3.2 | CDS | 76713106 | 76713369 | 76713106 | ID=cds.MS.gene81988.t1;Parent=MS.gene81988.t1 |
chr3.2 | exon | 76714014 | 76714211 | 76714014 | ID=MS.gene81988.t1.exon5;Parent=MS.gene81988.t1 |
chr3.2 | CDS | 76714014 | 76714211 | 76714014 | ID=cds.MS.gene81988.t1;Parent=MS.gene81988.t1 |
Gene Sequence |
Protein sequence |