Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76840.t1 | KEH44063.1 | 97.5 | 523 | 11 | 1 | 1 | 521 | 1 | 523 | 1.30E-302 | 1048.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76840.t1 | A0A072VRJ7 | 97.5 | 523 | 11 | 1 | 1 | 521 | 1 | 523 | 9.6e-303 | 1048.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene76840 | 0.851828 | 6.88E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene76840 | 0.860851 | 1.55E-63 | -1.69E-46 |
| MS.gene049232 | MS.gene76840 | 0.909119 | 8.10E-82 | -1.69E-46 |
| MS.gene049285 | MS.gene76840 | 0.866744 | 2.28E-65 | -1.69E-46 |
| MS.gene049320 | MS.gene76840 | 0.875974 | 2.02E-68 | -1.69E-46 |
| MS.gene049396 | MS.gene76840 | 0.874538 | 6.24E-68 | -1.69E-46 |
| MS.gene049552 | MS.gene76840 | 0.828222 | 1.01E-54 | -1.69E-46 |
| MS.gene049600 | MS.gene76840 | 0.847759 | 9.44E-60 | -1.69E-46 |
| MS.gene049609 | MS.gene76840 | 0.846691 | 1.85E-59 | -1.69E-46 |
| MS.gene049633 | MS.gene76840 | 0.858318 | 8.95E-63 | -1.69E-46 |
| MS.gene049656 | MS.gene76840 | 0.819957 | 8.84E-53 | -1.69E-46 |
| MS.gene049657 | MS.gene76840 | 0.811577 | 6.53E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene76840 | 0.818921 | 1.52E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene76840 | 0.818656 | 1.75E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene76840 | 0.89392 | 4.01E-75 | -1.69E-46 |
| MS.gene050163 | MS.gene76840 | 0.805319 | 1.41E-49 | -1.69E-46 |
| MS.gene050165 | MS.gene76840 | 0.805238 | 1.47E-49 | -1.69E-46 |
| MS.gene050170 | MS.gene76840 | 0.909527 | 5.16E-82 | -1.69E-46 |
| MS.gene050216 | MS.gene76840 | 0.85005 | 2.18E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene76840 | 0.914551 | 1.68E-84 | -1.69E-46 |
| MS.gene050333 | MS.gene76840 | 0.812797 | 3.54E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene76840 | -0.812686 | 3.74E-51 | -1.69E-46 |
| MS.gene050496 | MS.gene76840 | 0.894987 | 1.47E-75 | -1.69E-46 |
| MS.gene050499 | MS.gene76840 | 0.820474 | 6.73E-53 | -1.69E-46 |
| MS.gene050502 | MS.gene76840 | 0.906575 | 1.28E-80 | -1.69E-46 |
| MS.gene050504 | MS.gene76840 | 0.877223 | 7.46E-69 | -1.69E-46 |
| MS.gene050518 | MS.gene76840 | 0.864734 | 9.83E-65 | -1.69E-46 |
| MS.gene050538 | MS.gene76840 | 0.801209 | 1.00E-48 | -1.69E-46 |
| MS.gene050577 | MS.gene76840 | 0.870244 | 1.69E-66 | -1.69E-46 |
| MS.gene050612 | MS.gene76840 | 0.87421 | 8.07E-68 | -1.69E-46 |
| MS.gene050662 | MS.gene76840 | 0.828512 | 8.63E-55 | -1.69E-46 |
| MS.gene050675 | MS.gene76840 | 0.8341 | 3.64E-56 | -1.69E-46 |
| MS.gene050697 | MS.gene76840 | 0.865494 | 5.67E-65 | -1.69E-46 |
| MS.gene050699 | MS.gene76840 | 0.837451 | 5.16E-57 | -1.69E-46 |
| MS.gene050747 | MS.gene76840 | 0.866009 | 3.90E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene76840 | 0.881274 | 2.75E-70 | -1.69E-46 |
| MS.gene05080 | MS.gene76840 | 0.865038 | 7.89E-65 | -1.69E-46 |
| MS.gene050868 | MS.gene76840 | 0.897299 | 1.61E-76 | -1.69E-46 |
| MS.gene050871 | MS.gene76840 | 0.899378 | 2.10E-77 | -1.69E-46 |
| MS.gene050876 | MS.gene76840 | 0.822491 | 2.30E-53 | -1.69E-46 |
| MS.gene050904 | MS.gene76840 | 0.832643 | 8.41E-56 | -1.69E-46 |
| MS.gene050950 | MS.gene76840 | 0.865048 | 7.83E-65 | -1.69E-46 |
| MS.gene050986 | MS.gene76840 | 0.866199 | 3.40E-65 | -1.69E-46 |
| MS.gene05118 | MS.gene76840 | 0.835768 | 1.38E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene76840 | 0.844691 | 6.46E-59 | -1.69E-46 |
| MS.gene051317 | MS.gene76840 | 0.828411 | 9.13E-55 | -1.69E-46 |
| MS.gene051509 | MS.gene76840 | 0.872534 | 2.95E-67 | -1.69E-46 |
| MS.gene051551 | MS.gene76840 | 0.85474 | 1.01E-61 | -1.69E-46 |
| MS.gene051560 | MS.gene76840 | 0.813853 | 2.07E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene76840 | -0.810427 | 1.16E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene76840 | 0.810006 | 1.43E-50 | -1.69E-46 |
| MS.gene051838 | MS.gene76840 | 0.826046 | 3.36E-54 | -1.69E-46 |
| MS.gene051874 | MS.gene76840 | 0.819014 | 1.45E-52 | -1.69E-46 |
| MS.gene051941 | MS.gene76840 | 0.840649 | 7.66E-58 | -1.69E-46 |
| MS.gene052066 | MS.gene76840 | 0.85513 | 7.76E-62 | -1.69E-46 |
| MS.gene052164 | MS.gene76840 | 0.886064 | 4.73E-72 | -1.69E-46 |
| MS.gene052346 | MS.gene76840 | 0.816712 | 4.80E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene76840 | 0.886179 | 4.28E-72 | -1.69E-46 |
| MS.gene052486 | MS.gene76840 | 0.886811 | 2.47E-72 | -1.69E-46 |
| MS.gene052503 | MS.gene76840 | 0.862186 | 6.06E-64 | -1.69E-46 |
| MS.gene052504 | MS.gene76840 | 0.832448 | 9.40E-56 | -1.69E-46 |
| MS.gene052506 | MS.gene76840 | 0.856836 | 2.46E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene76840 | 0.845244 | 4.58E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene76840 | 0.868485 | 6.31E-66 | -1.69E-46 |
| MS.gene052823 | MS.gene76840 | 0.864483 | 1.18E-64 | -1.69E-46 |
| MS.gene052825 | MS.gene76840 | 0.851826 | 6.89E-61 | -1.69E-46 |
| MS.gene052916 | MS.gene76840 | 0.839167 | 1.86E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene76840 | 0.860505 | 1.97E-63 | -1.69E-46 |
| MS.gene052987 | MS.gene76840 | 0.804697 | 1.91E-49 | -1.69E-46 |
| MS.gene053018 | MS.gene76840 | 0.802008 | 6.88E-49 | -1.69E-46 |
| MS.gene053117 | MS.gene76840 | 0.807766 | 4.31E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene76840 | 0.85364 | 2.09E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene76840 | 0.869415 | 3.15E-66 | -1.69E-46 |
| MS.gene053286 | MS.gene76840 | 0.872358 | 3.38E-67 | -1.69E-46 |
| MS.gene053420 | MS.gene76840 | -0.819519 | 1.11E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene76840 | 0.876111 | 1.81E-68 | -1.69E-46 |
| MS.gene053479 | MS.gene76840 | 0.835428 | 1.69E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene76840 | 0.845702 | 3.44E-59 | -1.69E-46 |
| MS.gene053505 | MS.gene76840 | 0.823154 | 1.61E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene76840 | 0.906846 | 9.59E-81 | -1.69E-46 |
| MS.gene053626 | MS.gene76840 | 0.89187 | 2.68E-74 | -1.69E-46 |
| MS.gene053632 | MS.gene76840 | 0.805554 | 1.26E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene76840 | 0.848417 | 6.21E-60 | -1.69E-46 |
| MS.gene053824 | MS.gene76840 | 0.868114 | 8.30E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene76840 | 0.8577 | 1.37E-62 | -1.69E-46 |
| MS.gene054003 | MS.gene76840 | 0.834383 | 3.09E-56 | -1.69E-46 |
| MS.gene054408 | MS.gene76840 | 0.87514 | 3.90E-68 | -1.69E-46 |
| MS.gene054595 | MS.gene76840 | 0.873544 | 1.35E-67 | -1.69E-46 |
| MS.gene054600 | MS.gene76840 | 0.832761 | 7.86E-56 | -1.69E-46 |
| MS.gene054642 | MS.gene76840 | 0.85561 | 5.62E-62 | -1.69E-46 |
| MS.gene054706 | MS.gene76840 | -0.811893 | 5.57E-51 | -1.69E-46 |
| MS.gene05470 | MS.gene76840 | 0.856823 | 2.48E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene76840 | 0.834508 | 2.88E-56 | -1.69E-46 |
| MS.gene054954 | MS.gene76840 | 0.887697 | 1.14E-72 | -1.69E-46 |
| MS.gene05505 | MS.gene76840 | 0.828813 | 7.30E-55 | -1.69E-46 |
| MS.gene055154 | MS.gene76840 | -0.802949 | 4.40E-49 | -1.69E-46 |
| MS.gene055224 | MS.gene76840 | 0.859783 | 3.26E-63 | -1.69E-46 |
| MS.gene055362 | MS.gene76840 | 0.866162 | 3.49E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene76840 | 0.863795 | 1.93E-64 | -1.69E-46 |
| MS.gene055577 | MS.gene76840 | 0.841824 | 3.76E-58 | -1.69E-46 |
| MS.gene055629 | MS.gene76840 | 0.808257 | 3.38E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene76840 | 0.843214 | 1.61E-58 | -1.69E-46 |
| MS.gene055741 | MS.gene76840 | 0.804387 | 2.21E-49 | -1.69E-46 |
| MS.gene055748 | MS.gene76840 | 0.857426 | 1.65E-62 | -1.69E-46 |
| MS.gene055750 | MS.gene76840 | 0.892613 | 1.35E-74 | -1.69E-46 |
| MS.gene055751 | MS.gene76840 | 0.868217 | 7.69E-66 | -1.69E-46 |
| MS.gene055776 | MS.gene76840 | 0.87196 | 4.59E-67 | -1.69E-46 |
| MS.gene055849 | MS.gene76840 | 0.806542 | 7.82E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene76840 | 0.914524 | 1.73E-84 | -1.69E-46 |
| MS.gene055909 | MS.gene76840 | 0.810672 | 1.03E-50 | -1.69E-46 |
| MS.gene055911 | MS.gene76840 | 0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene76840 | 0.819374 | 1.20E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene76840 | 0.819369 | 1.20E-52 | -1.69E-46 |
| MS.gene056046 | MS.gene76840 | 0.880389 | 5.72E-70 | -1.69E-46 |
| MS.gene056166 | MS.gene76840 | 0.878761 | 2.16E-69 | -1.69E-46 |
| MS.gene056374 | MS.gene76840 | 0.812797 | 3.54E-51 | -1.69E-46 |
| MS.gene056387 | MS.gene76840 | 0.853618 | 2.12E-61 | -1.69E-46 |
| MS.gene056422 | MS.gene76840 | 0.844559 | 7.02E-59 | -1.69E-46 |
| MS.gene056446 | MS.gene76840 | 0.89862 | 4.44E-77 | -1.69E-46 |
| MS.gene056448 | MS.gene76840 | 0.820595 | 6.31E-53 | -1.69E-46 |
| MS.gene056487 | MS.gene76840 | 0.817895 | 2.60E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene76840 | 0.938588 | 5.25E-99 | -1.69E-46 |
| MS.gene056510 | MS.gene76840 | 0.886178 | 4.29E-72 | -1.69E-46 |
| MS.gene056657 | MS.gene76840 | 0.88207 | 1.42E-70 | -1.69E-46 |
| MS.gene056692 | MS.gene76840 | 0.81538 | 9.53E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene76840 | 0.842199 | 2.99E-58 | -1.69E-46 |
| MS.gene057019 | MS.gene76840 | 0.819777 | 9.72E-53 | -1.69E-46 |
| MS.gene057076 | MS.gene76840 | 0.858903 | 5.98E-63 | -1.69E-46 |
| MS.gene057086 | MS.gene76840 | 0.870336 | 1.58E-66 | -1.69E-46 |
| MS.gene057331 | MS.gene76840 | 0.801073 | 1.07E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene76840 | 0.811964 | 5.38E-51 | -1.69E-46 |
| MS.gene057687 | MS.gene76840 | 0.829401 | 5.26E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene76840 | 0.821884 | 3.18E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene76840 | 0.82533 | 4.97E-54 | -1.69E-46 |
| MS.gene057872 | MS.gene76840 | 0.844134 | 9.12E-59 | -1.69E-46 |
| MS.gene057876 | MS.gene76840 | 0.818225 | 2.19E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene76840 | 0.891852 | 2.72E-74 | -1.69E-46 |
| MS.gene058130 | MS.gene76840 | 0.860748 | 1.66E-63 | -1.69E-46 |
| MS.gene058157 | MS.gene76840 | 0.841144 | 5.68E-58 | -1.69E-46 |
| MS.gene058171 | MS.gene76840 | -0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene058173 | MS.gene76840 | -0.814428 | 1.55E-51 | -1.69E-46 |
| MS.gene058175 | MS.gene76840 | -0.818465 | 1.93E-52 | -1.69E-46 |
| MS.gene058334 | MS.gene76840 | -0.832181 | 1.09E-55 | -1.69E-46 |
| MS.gene058338 | MS.gene76840 | 0.834466 | 2.95E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene76840 | 0.871329 | 7.43E-67 | -1.69E-46 |
| MS.gene058419 | MS.gene76840 | 0.871761 | 5.34E-67 | -1.69E-46 |
| MS.gene058544 | MS.gene76840 | 0.831375 | 1.73E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene76840 | 0.828482 | 8.78E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene76840 | 0.837567 | 4.82E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene76840 | 0.86673 | 2.30E-65 | -1.69E-46 |
| MS.gene059023 | MS.gene76840 | 0.853947 | 1.71E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene76840 | 0.855781 | 5.01E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene76840 | 0.837672 | 4.53E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene76840 | 0.887491 | 1.36E-72 | -1.69E-46 |
| MS.gene059368 | MS.gene76840 | 0.846441 | 2.17E-59 | -1.69E-46 |
| MS.gene059517 | MS.gene76840 | 0.8057 | 1.18E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene76840 | 0.884352 | 2.06E-71 | -1.69E-46 |
| MS.gene059677 | MS.gene76840 | 0.841408 | 4.84E-58 | -1.69E-46 |
| MS.gene059680 | MS.gene76840 | 0.809395 | 1.93E-50 | -1.69E-46 |
| MS.gene059703 | MS.gene76840 | -0.813754 | 2.18E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene76840 | 0.858838 | 6.26E-63 | -1.69E-46 |
| MS.gene059801 | MS.gene76840 | 0.816966 | 4.21E-52 | -1.69E-46 |
| MS.gene059837 | MS.gene76840 | 0.87174 | 5.43E-67 | -1.69E-46 |
| MS.gene059865 | MS.gene76840 | 0.917121 | 7.80E-86 | -1.69E-46 |
| MS.gene05996 | MS.gene76840 | 0.810812 | 9.57E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene76840 | 0.885399 | 8.41E-72 | -1.69E-46 |
| MS.gene060295 | MS.gene76840 | 0.804419 | 2.18E-49 | -1.69E-46 |
| MS.gene060372 | MS.gene76840 | 0.820544 | 6.48E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene76840 | 0.860558 | 1.90E-63 | -1.69E-46 |
| MS.gene060593 | MS.gene76840 | -0.816991 | 4.16E-52 | -1.69E-46 |
| MS.gene060595 | MS.gene76840 | -0.850735 | 1.40E-60 | -1.69E-46 |
| MS.gene060703 | MS.gene76840 | 0.864401 | 1.25E-64 | -1.69E-46 |
| MS.gene060762 | MS.gene76840 | 0.857404 | 1.67E-62 | -1.69E-46 |
| MS.gene060778 | MS.gene76840 | 0.92657 | 3.91E-91 | -1.69E-46 |
| MS.gene06077 | MS.gene76840 | 0.896184 | 4.70E-76 | -1.69E-46 |
| MS.gene060835 | MS.gene76840 | 0.831843 | 1.33E-55 | -1.69E-46 |
| MS.gene06092 | MS.gene76840 | 0.812118 | 4.98E-51 | -1.69E-46 |
| MS.gene06097 | MS.gene76840 | 0.899674 | 1.57E-77 | -1.69E-46 |
| MS.gene060982 | MS.gene76840 | 0.920891 | 7.20E-88 | -1.69E-46 |
| MS.gene061044 | MS.gene76840 | -0.806361 | 8.54E-50 | -1.69E-46 |
| MS.gene061218 | MS.gene76840 | 0.840638 | 7.71E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76840.t1 | MTR_1g107165 | 97.514 | 523 | 11 | 1 | 1 | 521 | 1 | 523 | 0.0 | 1054 |
| MS.gene76840.t1 | MTR_5g083500 | 27.955 | 533 | 319 | 18 | 1 | 514 | 7 | 493 | 2.26e-51 | 182 |
| MS.gene76840.t1 | MTR_3g071950 | 27.704 | 527 | 326 | 14 | 2 | 514 | 7 | 492 | 3.48e-50 | 179 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene76840.t1 | AT2G15020 | 49.536 | 539 | 234 | 12 | 1 | 517 | 1 | 523 | 0.0 | 528 |
| MS.gene76840.t1 | AT5G64190 | 25.279 | 538 | 336 | 15 | 2 | 516 | 7 | 501 | 7.61e-47 | 171 |
| MS.gene76840.t1 | AT5G64190 | 25.279 | 538 | 336 | 15 | 2 | 516 | 8 | 502 | 7.66e-47 | 171 |
| MS.gene76840.t1 | AT2G40390 | 27.652 | 528 | 329 | 18 | 2 | 516 | 8 | 495 | 1.97e-40 | 153 |
Find 144 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTAGGAGTGGGAGGAAATT+AGG | 0.150832 | 1.1:+76782279 | None:intergenic |
| TCCTTCCCGGGCTCGGGTTT+GGG | 0.154770 | 1.1:-76781539 | MS.gene76840:CDS |
| GTTTGGGTGGGCCCGGAAAT+TGG | 0.177853 | 1.1:-76781523 | MS.gene76840:CDS |
| CTCAAAGCAGAGCGAACTTC+TGG | 0.228304 | 1.1:-76782414 | MS.gene76840:CDS |
| TTCCTTCCCGGGCTCGGGTT+TGG | 0.231232 | 1.1:-76781540 | MS.gene76840:CDS |
| AAGAAAATGGAGAGGGATTC+TGG | 0.256277 | 1.1:+76782138 | None:intergenic |
| GTTGATTTGCCTCTAATTCA+TGG | 0.263186 | 1.1:-76781001 | MS.gene76840:CDS |
| GTAGGAGTGGGAGGAAATTA+GGG | 0.286085 | 1.1:+76782280 | None:intergenic |
| ACATAACTAGCTCCAATTTC+CGG | 0.286974 | 1.1:+76781511 | None:intergenic |
| CACCATACAATATGGATATT+TGG | 0.297897 | 1.1:-76782545 | None:intergenic |
| GAAATTGAGAAGGTTGTTAA+TGG | 0.304105 | 1.1:-76781439 | MS.gene76840:CDS |
| GAAAACAAGGTTGAAGAAAA+TGG | 0.312483 | 1.1:+76782125 | None:intergenic |
| ATGGTGCATTATAAGAGAAT+TGG | 0.313676 | 1.1:-76781905 | MS.gene76840:CDS |
| CATTTCTCGGAGATCCAAAT+AGG | 0.321681 | 1.1:+76782321 | None:intergenic |
| CTCTGTTTCATGCGCACCCT+TGG | 0.328639 | 1.1:-76781943 | MS.gene76840:CDS |
| GCTTCCACGAGCCCACTTCT+TGG | 0.331509 | 1.1:+76781272 | None:intergenic |
| GTAATAGCAGGGGATGAATA+TGG | 0.339074 | 1.1:-76781169 | MS.gene76840:CDS |
| CATAACTAGCTCCAATTTCC+GGG | 0.345763 | 1.1:+76781512 | None:intergenic |
| CGTCTCCATGTGGCGAGATT+AGG | 0.347974 | 1.1:-76781607 | MS.gene76840:CDS |
| ACCGACCCGCTCTTACTAAA+TGG | 0.353331 | 1.1:+76781193 | None:intergenic |
| GTGAGTTGGATATGATTTCT+TGG | 0.353682 | 1.1:+76782247 | None:intergenic |
| TTATGTGGCAGGCTTGAGTT+TGG | 0.357892 | 1.1:-76781494 | MS.gene76840:CDS |
| GGTTGAAGGGGCGATATGTC+GGG | 0.376232 | 1.1:-76781225 | MS.gene76840:CDS |
| GCCAGTTTCATAGTCATAAC+TGG | 0.380966 | 1.1:+76781793 | None:intergenic |
| GCCAGTTATGACTATGAAAC+TGG | 0.387517 | 1.1:-76781794 | MS.gene76840:CDS |
| TGAAGAGAGTGTGCATTTCT+CGG | 0.388125 | 1.1:+76782308 | None:intergenic |
| CGCCCCTTCAACCCATGAAT+CGG | 0.388610 | 1.1:+76781235 | None:intergenic |
| TTGGGTACATAATAGCAAAA+TGG | 0.392593 | 1.1:-76781924 | MS.gene76840:CDS |
| GGCTCGGGTTTGGGTGGGCC+CGG | 0.397924 | 1.1:-76781530 | MS.gene76840:CDS |
| CTAGCAAGTTCGAACTTCAT+TGG | 0.398302 | 1.1:+76782471 | None:intergenic |
| TGCGACGCGCCTAGCGAGGC+AGG | 0.402409 | 1.1:-76782075 | MS.gene76840:CDS |
| TGGTGCATTATAAGAGAATT+GGG | 0.410752 | 1.1:-76781904 | MS.gene76840:CDS |
| ATGAAACTGGCGCGAAACTA+CGG | 0.423192 | 1.1:-76781781 | MS.gene76840:CDS |
| ATATGATTTCTTGGAGGAGT+TGG | 0.425448 | 1.1:+76782256 | None:intergenic |
| GTGTGTTGAAGTGGAGGATA+GGG | 0.426343 | 1.1:-76781105 | MS.gene76840:CDS |
| ATGATCCATGCTATGGGCTC+TGG | 0.428592 | 1.1:+76782174 | None:intergenic |
| AGTGTGTTGAAGTGGAGGAT+AGG | 0.432586 | 1.1:-76781106 | MS.gene76840:CDS |
| GGCCCACCCAAACCCGAGCC+CGG | 0.433858 | 1.1:+76781533 | None:intergenic |
| ACGGGTGATGACCCGATTCA+TGG | 0.434000 | 1.1:-76781247 | MS.gene76840:CDS |
| GGGTTGAAGGGGCGATATGT+CGG | 0.439602 | 1.1:-76781226 | MS.gene76840:CDS |
| TATGTGGCAGGCTTGAGTTT+GGG | 0.448486 | 1.1:-76781493 | MS.gene76840:CDS |
| GATGAATATGGAGAAGAAGT+AGG | 0.452069 | 1.1:-76781157 | MS.gene76840:CDS |
| CTTGAGTTTGGGTCGGTCTA+CGG | 0.453754 | 1.1:-76781482 | MS.gene76840:CDS |
| CTCATTCCACTCTACTGAGC+TGG | 0.458461 | 1.1:+76782503 | None:intergenic |
| GGAGGAGTTGGAGTAGGAGT+GGG | 0.460854 | 1.1:+76782268 | None:intergenic |
| GACAACGCAGTTTCGAGAAC+CGG | 0.463504 | 1.1:+76782024 | None:intergenic |
| TCTGTTTCATGCGCACCCTT+GGG | 0.465524 | 1.1:-76781942 | MS.gene76840:CDS |
| TACCTGCCTGACCAAGCAAA+AGG | 0.472557 | 1.1:-76781064 | MS.gene76840:CDS |
| TGGAGGAGTTGGAGTAGGAG+TGG | 0.474177 | 1.1:+76782267 | None:intergenic |
| TCCCGGGCTCGGGTTTGGGT+GGG | 0.474749 | 1.1:-76781535 | MS.gene76840:CDS |
| TGAAACTGGCGCGAAACTAC+GGG | 0.475994 | 1.1:-76781780 | MS.gene76840:CDS |
| AGCGGGTCGGTTGTAATAGC+AGG | 0.479382 | 1.1:-76781181 | MS.gene76840:CDS |
| ACCTTCATGGTATTCTTACA+AGG | 0.479621 | 1.1:-76782369 | MS.gene76840:CDS |
| ATGCTAAGGAGTCAATAATC+AGG | 0.479874 | 1.1:-76781732 | MS.gene76840:CDS |
| CGGTCTAGCTCACCACCAAT+TGG | 0.481424 | 1.1:-76781707 | MS.gene76840:CDS |
| TCCGTGGCGTAAGAGAATTT+CGG | 0.482234 | 1.1:+76781850 | None:intergenic |
| CGAGTCTATGATCCATGCTA+TGG | 0.484977 | 1.1:+76782167 | None:intergenic |
| CGCTTGCGACGCGCCTAGCG+AGG | 0.486831 | 1.1:-76782079 | MS.gene76840:CDS |
| GAGAACAAAGAGTTGGAGAA+TGG | 0.487193 | 1.1:-76781356 | MS.gene76840:CDS |
| TTCCCGGGCTCGGGTTTGGG+TGG | 0.488666 | 1.1:-76781536 | MS.gene76840:CDS |
| GCCCCTTCAACCCATGAATC+GGG | 0.488783 | 1.1:+76781236 | None:intergenic |
| TTTCTTGGAGGAGTTGGAGT+AGG | 0.492223 | 1.1:+76782262 | None:intergenic |
| TGTGTTGAAGTGGAGGATAG+GGG | 0.494047 | 1.1:-76781104 | MS.gene76840:CDS |
| GACCCGATTCATGGGTTGAA+GGG | 0.496070 | 1.1:-76781238 | MS.gene76840:CDS |
| TCAAAGCAGAGCGAACTTCT+GGG | 0.497368 | 1.1:-76782413 | MS.gene76840:CDS |
| AAGCTTCAGCGAAGTCTTCG+AGG | 0.497840 | 1.1:-76781384 | MS.gene76840:CDS |
| GTGGAGGTTAAGTAAAGAGA+TGG | 0.497916 | 1.1:-76781134 | MS.gene76840:CDS |
| TTTCCACTCGTTACTTGCTC+CGG | 0.502153 | 1.1:-76782043 | MS.gene76840:CDS |
| ACCCAAACCCGAGCCCGGGA+AGG | 0.505885 | 1.1:+76781538 | None:intergenic |
| ATTTCAAGGTATTGATGCTA+AGG | 0.506261 | 1.1:-76781746 | MS.gene76840:CDS |
| ATGAATATGGAGAAGAAGTA+GGG | 0.506264 | 1.1:-76781156 | MS.gene76840:CDS |
| GGGCAAAACGGTAAATTTCA+AGG | 0.509959 | 1.1:-76781760 | MS.gene76840:CDS |
| ACTGCACGTGTGCTTCCAAT+TGG | 0.511898 | 1.1:+76781692 | None:intergenic |
| TGGAAGGGAGTGTGTTGAAG+TGG | 0.512738 | 1.1:-76781114 | MS.gene76840:CDS |
| AGAAGCACTAGTAACCTTCA+TGG | 0.513303 | 1.1:-76782382 | MS.gene76840:CDS |
| ATTATAAGAGAATTGGGTGT+AGG | 0.514599 | 1.1:-76781898 | MS.gene76840:CDS |
| GCCCACCCAAACCCGAGCCC+GGG | 0.519196 | 1.1:+76781534 | None:intergenic |
| GGAGAATGAGAACAAAGAGT+TGG | 0.522842 | 1.1:-76781363 | MS.gene76840:CDS |
| AGTGGGCTCGTGGAAGCCTA+CGG | 0.523175 | 1.1:-76781266 | MS.gene76840:CDS |
| CGGGCCAAGAAGTGGGCTCG+TGG | 0.526068 | 1.1:-76781276 | MS.gene76840:CDS |
| CGAGAAATCAGATATTTCAA+AGG | 0.531598 | 1.1:-76781410 | MS.gene76840:CDS |
| GGTTAAGTAAAGAGATGGAA+GGG | 0.532562 | 1.1:-76781129 | MS.gene76840:CDS |
| ATTGGAGCTAGTTATGTGGC+AGG | 0.533692 | 1.1:-76781505 | MS.gene76840:CDS |
| AAGTTCGAACTTGCTAGAGA+TGG | 0.535314 | 1.1:-76782465 | MS.gene76840:CDS |
| TCATTCCACTCTACTGAGCT+GGG | 0.537296 | 1.1:+76782504 | None:intergenic |
| GTGGGCTCGTGGAAGCCTAC+GGG | 0.538592 | 1.1:-76781265 | MS.gene76840:CDS |
| CGGGTGATGACCCGATTCAT+GGG | 0.539719 | 1.1:-76781246 | MS.gene76840:CDS |
| GGAGTTGGAGTAGGAGTGGG+AGG | 0.540122 | 1.1:+76782271 | None:intergenic |
| ATGGAGAAGAAGTAGGGTGG+AGG | 0.540386 | 1.1:-76781150 | MS.gene76840:CDS |
| GTGTTGAAGTGGAGGATAGG+GGG | 0.541041 | 1.1:-76781103 | MS.gene76840:CDS |
| GCGCGAAACTACGGGCAAAA+CGG | 0.542584 | 1.1:-76781772 | MS.gene76840:CDS |
| TAGAGTGAACCTGCCTCGCT+AGG | 0.545326 | 1.1:+76782066 | None:intergenic |
| ATTGGAAGCACACGTGCAGT+TGG | 0.551697 | 1.1:-76781689 | MS.gene76840:CDS |
| TAATATGACGGGCCAAGAAG+TGG | 0.553598 | 1.1:-76781284 | MS.gene76840:CDS |
| ATCGTGTGCTGTGGGTGAGT+TGG | 0.557028 | 1.1:+76782233 | None:intergenic |
| AATATGGAGAAGAAGTAGGG+TGG | 0.557252 | 1.1:-76781153 | MS.gene76840:CDS |
| TGGCAGGCTTGAGTTTGGGT+CGG | 0.560008 | 1.1:-76781489 | MS.gene76840:CDS |
| ACCTGCCTGACCAAGCAAAA+GGG | 0.564399 | 1.1:-76781063 | MS.gene76840:CDS |
| GGAGAATAATGAAAGAGAAG+TGG | 0.566557 | 1.1:-76781461 | MS.gene76840:CDS |
| ATAGACCATTTAGTAAGAGC+GGG | 0.569119 | 1.1:-76781198 | MS.gene76840:CDS |
| AACTCCCCAGCTCAGTAGAG+TGG | 0.570068 | 1.1:-76782509 | MS.gene76840:CDS |
| TAAGAGAATTTCGGATTCGA+AGG | 0.571957 | 1.1:+76781859 | None:intergenic |
| GTGCAGTTGGAATATACAGT+TGG | 0.573238 | 1.1:-76781676 | MS.gene76840:CDS |
| AGTTGGATATGATTTCTTGG+AGG | 0.577043 | 1.1:+76782250 | None:intergenic |
| TGACCCGATTCATGGGTTGA+AGG | 0.577299 | 1.1:-76781239 | MS.gene76840:CDS |
| AGGTTAAGTAAAGAGATGGA+AGG | 0.577773 | 1.1:-76781130 | MS.gene76840:CDS |
| ACAATATGGATATTTGGTCA+TGG | 0.577891 | 1.1:-76782539 | None:intergenic |
| AAGAGAAGTGGAAATTGAGA+AGG | 0.580891 | 1.1:-76781449 | MS.gene76840:CDS |
| GCACGTGTGCTTCCAATTGG+TGG | 0.586502 | 1.1:+76781695 | None:intergenic |
| TCTTACGCCACGGAGTCTCA+AGG | 0.587357 | 1.1:-76781841 | MS.gene76840:CDS |
| ACCCGATTCATGGGTTGAAG+GGG | 0.587692 | 1.1:-76781237 | MS.gene76840:CDS |
| GAGTCTATGATCCATGCTAT+GGG | 0.587822 | 1.1:+76782168 | None:intergenic |
| AATATGACGGGCCAAGAAGT+GGG | 0.587989 | 1.1:-76781283 | MS.gene76840:CDS |
| GCGGGTCGGTTGTAATAGCA+GGG | 0.593458 | 1.1:-76781180 | MS.gene76840:CDS |
| GCAAGTGCTATCGTGTGCTG+TGG | 0.594345 | 1.1:+76782224 | None:intergenic |
| TACACCTACGGTGATAAAGA+AGG | 0.594492 | 1.1:+76781975 | None:intergenic |
| GAGTTCAGTGTCTACACCTA+CGG | 0.594648 | 1.1:+76781963 | None:intergenic |
| GAATGGATCAAGACGCGGAG+GGG | 0.597718 | 1.1:-76781339 | MS.gene76840:CDS |
| AAGGTTGAAGAAAATGGAGA+GGG | 0.609805 | 1.1:+76782131 | None:intergenic |
| TCAAACCAGAGCCCATAGCA+TGG | 0.613481 | 1.1:-76782179 | MS.gene76840:CDS |
| GTTGAAGGGGCGATATGTCG+GGG | 0.613691 | 1.1:-76781224 | MS.gene76840:CDS |
| AAGGAGTCAATAATCAGGTA+CGG | 0.618007 | 1.1:-76781727 | MS.gene76840:CDS |
| AGAACCTTCTTTATCACCGT+AGG | 0.624589 | 1.1:-76781979 | MS.gene76840:CDS |
| CAAGGTTGAAGAAAATGGAG+AGG | 0.624633 | 1.1:+76782130 | None:intergenic |
| TCCGAAATTCTCTTACGCCA+CGG | 0.629660 | 1.1:-76781851 | MS.gene76840:CDS |
| GCCTTGTAAGAATACCATGA+AGG | 0.630625 | 1.1:+76782368 | None:intergenic |
| AATAGACCATTTAGTAAGAG+CGG | 0.634830 | 1.1:-76781199 | MS.gene76840:CDS |
| GTTGTCGAAGAAACTAGCTT+CGG | 0.635873 | 1.1:-76782007 | MS.gene76840:CDS |
| AAGGGAGTGTGTTGAAGTGG+AGG | 0.645267 | 1.1:-76781111 | MS.gene76840:CDS |
| ACCATTTAGTAAGAGCGGGT+CGG | 0.645800 | 1.1:-76781194 | MS.gene76840:CDS |
| GGAAATTGGAGCTAGTTATG+TGG | 0.646603 | 1.1:-76781509 | MS.gene76840:CDS |
| TAAAACCTAATCTCGCCACA+TGG | 0.646686 | 1.1:+76781602 | None:intergenic |
| GAACCGGAGCAAGTAACGAG+TGG | 0.649394 | 1.1:+76782040 | None:intergenic |
| GAGAATGGATCAAGACGCGG+AGG | 0.650927 | 1.1:-76781341 | MS.gene76840:CDS |
| AGAGACGAATGGTGAAAACA+AGG | 0.653167 | 1.1:+76782112 | None:intergenic |
| CAAGTGCTATCGTGTGCTGT+GGG | 0.657065 | 1.1:+76782225 | None:intergenic |
| GCATAGCCAAAAGAGACGAA+TGG | 0.660735 | 1.1:+76782101 | None:intergenic |
| AGAATGGATCAAGACGCGGA+GGG | 0.664709 | 1.1:-76781340 | MS.gene76840:CDS |
| CATTCCACTCTACTGAGCTG+GGG | 0.683835 | 1.1:+76782505 | None:intergenic |
| TTGAAACTAGATGTATTGAG+TGG | 0.685420 | 1.1:-76781033 | MS.gene76840:CDS |
| CGGGTCGGTTGTAATAGCAG+GGG | 0.688298 | 1.1:-76781179 | MS.gene76840:CDS |
| TGAATCGGGTCATCACCCGT+AGG | 0.692591 | 1.1:+76781250 | None:intergenic |
| TGATAATATACGTCTCCATG+TGG | 0.695983 | 1.1:-76781617 | MS.gene76840:CDS |
| TTGGAGAATGGATCAAGACG+CGG | 0.707631 | 1.1:-76781344 | MS.gene76840:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTAATTTTCCATGAATTAG+AGG | + | chr1.1:76782533-76782552 | None:intergenic | 25.0% |
| !! | TATACAGTTGGATTTTATGA+TGG | - | chr1.1:76781858-76781877 | MS.gene76840:CDS | 25.0% |
| !! | TGTTTTGCATGATAATATGA+CGG | - | chr1.1:76782226-76782245 | MS.gene76840:CDS | 25.0% |
| !!! | ATTTTATGATGGATTCATTC+AGG | - | chr1.1:76781869-76781888 | MS.gene76840:CDS | 25.0% |
| AATAGACCATTTAGTAAGAG+CGG | - | chr1.1:76782323-76782342 | MS.gene76840:CDS | 30.0% | |
| ATGAATATGGAGAAGAAGTA+GGG | - | chr1.1:76782366-76782385 | MS.gene76840:CDS | 30.0% | |
| ATGGTGCATTATAAGAGAAT+TGG | - | chr1.1:76781617-76781636 | MS.gene76840:CDS | 30.0% | |
| ATTATAAGAGAATTGGGTGT+AGG | - | chr1.1:76781624-76781643 | MS.gene76840:CDS | 30.0% | |
| CGAGAAATCAGATATTTCAA+AGG | - | chr1.1:76782112-76782131 | MS.gene76840:CDS | 30.0% | |
| GAAAACAAGGTTGAAGAAAA+TGG | + | chr1.1:76781400-76781419 | None:intergenic | 30.0% | |
| GAAATTGAGAAGGTTGTTAA+TGG | - | chr1.1:76782083-76782102 | MS.gene76840:CDS | 30.0% | |
| TGGTGCATTATAAGAGAATT+GGG | - | chr1.1:76781618-76781637 | MS.gene76840:CDS | 30.0% | |
| TTGAAACTAGATGTATTGAG+TGG | - | chr1.1:76782489-76782508 | MS.gene76840:CDS | 30.0% | |
| TTGGGTACATAATAGCAAAA+TGG | - | chr1.1:76781598-76781617 | MS.gene76840:CDS | 30.0% | |
| ! | GTTTTGCATGATAATATGAC+GGG | - | chr1.1:76782227-76782246 | MS.gene76840:CDS | 30.0% |
| !! | ATTTCAAGGTATTGATGCTA+AGG | - | chr1.1:76781776-76781795 | MS.gene76840:CDS | 30.0% |
| !! | TTTTAAACATGGTGATGATG+TGG | - | chr1.1:76781938-76781957 | MS.gene76840:CDS | 30.0% |
| !!! | ATTTTGCTATTATGTACCCA+AGG | + | chr1.1:76781599-76781618 | None:intergenic | 30.0% |
| !!! | TTTTGCTATTATGTACCCAA+GGG | + | chr1.1:76781598-76781617 | None:intergenic | 30.0% |
| AAGAGAAGTGGAAATTGAGA+AGG | - | chr1.1:76782073-76782092 | MS.gene76840:CDS | 35.0% | |
| AAGGAGTCAATAATCAGGTA+CGG | - | chr1.1:76781795-76781814 | MS.gene76840:CDS | 35.0% | |
| AAGGTTGAAGAAAATGGAGA+GGG | + | chr1.1:76781394-76781413 | None:intergenic | 35.0% | |
| ACATAACTAGCTCCAATTTC+CGG | + | chr1.1:76782014-76782033 | None:intergenic | 35.0% | |
| ACCTTCATGGTATTCTTACA+AGG | - | chr1.1:76781153-76781172 | MS.gene76840:CDS | 35.0% | |
| AGGTTAAGTAAAGAGATGGA+AGG | - | chr1.1:76782392-76782411 | MS.gene76840:CDS | 35.0% | |
| AGTTGGATATGATTTCTTGG+AGG | + | chr1.1:76781275-76781294 | None:intergenic | 35.0% | |
| ATAGACCATTTAGTAAGAGC+GGG | - | chr1.1:76782324-76782343 | MS.gene76840:CDS | 35.0% | |
| ATATGATTTCTTGGAGGAGT+TGG | + | chr1.1:76781269-76781288 | None:intergenic | 35.0% | |
| ATGCTAAGGAGTCAATAATC+AGG | - | chr1.1:76781790-76781809 | MS.gene76840:CDS | 35.0% | |
| GATGAATATGGAGAAGAAGT+AGG | - | chr1.1:76782365-76782384 | MS.gene76840:CDS | 35.0% | |
| GGAGAATAATGAAAGAGAAG+TGG | - | chr1.1:76782061-76782080 | MS.gene76840:CDS | 35.0% | |
| GGTTAAGTAAAGAGATGGAA+GGG | - | chr1.1:76782393-76782412 | MS.gene76840:CDS | 35.0% | |
| TAAGAGAATTTCGGATTCGA+AGG | + | chr1.1:76781666-76781685 | None:intergenic | 35.0% | |
| TCAACACCCAAAAACCTATT+TGG | - | chr1.1:76781187-76781206 | MS.gene76840:CDS | 35.0% | |
| TGATAATATACGTCTCCATG+TGG | - | chr1.1:76781905-76781924 | MS.gene76840:CDS | 35.0% | |
| ! | GGAGATCCAAATAGGTTTTT+GGG | + | chr1.1:76781196-76781215 | None:intergenic | 35.0% |
| ! | GTGAGTTGGATATGATTTCT+TGG | + | chr1.1:76781278-76781297 | None:intergenic | 35.0% |
| ! | TTTTCACCATTCGTCTCTTT+TGG | - | chr1.1:76781415-76781434 | MS.gene76840:CDS | 35.0% |
| !! | CAAGGTTTTTGGATTCTGAA+AGG | - | chr1.1:76781699-76781718 | MS.gene76840:CDS | 35.0% |
| !! | GTTGATTTGCCTCTAATTCA+TGG | - | chr1.1:76782521-76782540 | MS.gene76840:CDS | 35.0% |
| !!! | ATAGGTTTTTGGGTGTTGAA+TGG | + | chr1.1:76781186-76781205 | None:intergenic | 35.0% |
| !!! | GCGAGATTAGGTTTTAAACA+TGG | - | chr1.1:76781927-76781946 | MS.gene76840:CDS | 35.0% |
| !!! | TGGTTTGAGTTTTTGAAGCT+GGG | + | chr1.1:76781331-76781350 | None:intergenic | 35.0% |
| AAGAAAATGGAGAGGGATTC+TGG | + | chr1.1:76781387-76781406 | None:intergenic | 40.0% | |
| AATATGGAGAAGAAGTAGGG+TGG | - | chr1.1:76782369-76782388 | MS.gene76840:CDS | 40.0% | |
| AGAACCTTCTTTATCACCGT+AGG | - | chr1.1:76781543-76781562 | MS.gene76840:CDS | 40.0% | |
| AGAGACGAATGGTGAAAACA+AGG | + | chr1.1:76781413-76781432 | None:intergenic | 40.0% | |
| CAAGGTTGAAGAAAATGGAG+AGG | + | chr1.1:76781395-76781414 | None:intergenic | 40.0% | |
| CATAACTAGCTCCAATTTCC+GGG | + | chr1.1:76782013-76782032 | None:intergenic | 40.0% | |
| CATTTCTCGGAGATCCAAAT+AGG | + | chr1.1:76781204-76781223 | None:intergenic | 40.0% | |
| CTAGCAAGTTCGAACTTCAT+TGG | + | chr1.1:76781054-76781073 | None:intergenic | 40.0% | |
| GAGAACAAAGAGTTGGAGAA+TGG | - | chr1.1:76782166-76782185 | MS.gene76840:CDS | 40.0% | |
| GAGTCTATGATCCATGCTAT+GGG | + | chr1.1:76781357-76781376 | None:intergenic | 40.0% | |
| GCCAGTTATGACTATGAAAC+TGG | - | chr1.1:76781728-76781747 | MS.gene76840:CDS | 40.0% | |
| GCCAGTTTCATAGTCATAAC+TGG | + | chr1.1:76781732-76781751 | None:intergenic | 40.0% | |
| GCCTTGTAAGAATACCATGA+AGG | + | chr1.1:76781157-76781176 | None:intergenic | 40.0% | |
| GGAAATTGGAGCTAGTTATG+TGG | - | chr1.1:76782013-76782032 | MS.gene76840:CDS | 40.0% | |
| GGAGAATGAGAACAAAGAGT+TGG | - | chr1.1:76782159-76782178 | MS.gene76840:CDS | 40.0% | |
| GGGCAAAACGGTAAATTTCA+AGG | - | chr1.1:76781762-76781781 | MS.gene76840:CDS | 40.0% | |
| GTAATAGCAGGGGATGAATA+TGG | - | chr1.1:76782353-76782372 | MS.gene76840:CDS | 40.0% | |
| GTGCAGTTGGAATATACAGT+TGG | - | chr1.1:76781846-76781865 | MS.gene76840:CDS | 40.0% | |
| GTGGAGGTTAAGTAAAGAGA+TGG | - | chr1.1:76782388-76782407 | MS.gene76840:CDS | 40.0% | |
| TAAAACCTAATCTCGCCACA+TGG | + | chr1.1:76781923-76781942 | None:intergenic | 40.0% | |
| TACACCTACGGTGATAAAGA+AGG | + | chr1.1:76781550-76781569 | None:intergenic | 40.0% | |
| ! | ACGAGAAACATTTTCCTTCC+CGG | - | chr1.1:76781970-76781989 | MS.gene76840:CDS | 40.0% |
| ! | CAAAATGACTCCCTTTTGCT+TGG | + | chr1.1:76782472-76782491 | None:intergenic | 40.0% |
| ! | CGGAGATCCAAATAGGTTTT+TGG | + | chr1.1:76781197-76781216 | None:intergenic | 40.0% |
| ! | GTTGTCGAAGAAACTAGCTT+CGG | - | chr1.1:76781515-76781534 | MS.gene76840:CDS | 40.0% |
| ! | TGAAGAGAGTGTGCATTTCT+CGG | + | chr1.1:76781217-76781236 | None:intergenic | 40.0% |
| !! | AAGTTCGAACTTGCTAGAGA+TGG | - | chr1.1:76781057-76781076 | MS.gene76840:CDS | 40.0% |
| !! | AGAAGCACTAGTAACCTTCA+TGG | - | chr1.1:76781140-76781159 | MS.gene76840:CDS | 40.0% |
| !!! | AGTTTTTGAAGCTGGGATCT+AGG | + | chr1.1:76781324-76781343 | None:intergenic | 40.0% |
| !!! | CTGGTTTGAGTTTTTGAAGC+TGG | + | chr1.1:76781332-76781351 | None:intergenic | 40.0% |
| !!! | GTTTTTGAAGCTGGGATCTA+GGG | + | chr1.1:76781323-76781342 | None:intergenic | 40.0% |
| ACCATTTAGTAAGAGCGGGT+CGG | - | chr1.1:76782328-76782347 | MS.gene76840:CDS | 45.0% | |
| AGTAGGAGTGGGAGGAAATT+AGG | + | chr1.1:76781246-76781265 | None:intergenic | 45.0% | |
| AGTGTGTTGAAGTGGAGGAT+AGG | - | chr1.1:76782416-76782435 | MS.gene76840:CDS | 45.0% | |
| ATGAAACTGGCGCGAAACTA+CGG | - | chr1.1:76781741-76781760 | MS.gene76840:CDS | 45.0% | |
| ATTGGAGCTAGTTATGTGGC+AGG | - | chr1.1:76782017-76782036 | MS.gene76840:CDS | 45.0% | |
| CGAGTCTATGATCCATGCTA+TGG | + | chr1.1:76781358-76781377 | None:intergenic | 45.0% | |
| GAGTTCAGTGTCTACACCTA+CGG | + | chr1.1:76781562-76781581 | None:intergenic | 45.0% | |
| GCATAGCCAAAAGAGACGAA+TGG | + | chr1.1:76781424-76781443 | None:intergenic | 45.0% | |
| GTAGGAGTGGGAGGAAATTA+GGG | + | chr1.1:76781245-76781264 | None:intergenic | 45.0% | |
| GTGTGTTGAAGTGGAGGATA+GGG | - | chr1.1:76782417-76782436 | MS.gene76840:CDS | 45.0% | |
| TATGTGGCAGGCTTGAGTTT+GGG | - | chr1.1:76782029-76782048 | MS.gene76840:CDS | 45.0% | |
| TCAAAGCAGAGCGAACTTCT+GGG | - | chr1.1:76781109-76781128 | MS.gene76840:CDS | 45.0% | |
| TCATTCCACTCTACTGAGCT+GGG | + | chr1.1:76781021-76781040 | None:intergenic | 45.0% | |
| TCCGAAATTCTCTTACGCCA+CGG | - | chr1.1:76781671-76781690 | MS.gene76840:CDS | 45.0% | |
| TCCGTGGCGTAAGAGAATTT+CGG | + | chr1.1:76781675-76781694 | None:intergenic | 45.0% | |
| TGTGTTGAAGTGGAGGATAG+GGG | - | chr1.1:76782418-76782437 | MS.gene76840:CDS | 45.0% | |
| TTATGTGGCAGGCTTGAGTT+TGG | - | chr1.1:76782028-76782047 | MS.gene76840:CDS | 45.0% | |
| TTGGAGAATGGATCAAGACG+CGG | - | chr1.1:76782178-76782197 | MS.gene76840:CDS | 45.0% | |
| TTTCCACTCGTTACTTGCTC+CGG | - | chr1.1:76781479-76781498 | MS.gene76840:CDS | 45.0% | |
| TTTCTTGGAGGAGTTGGAGT+AGG | + | chr1.1:76781263-76781282 | None:intergenic | 45.0% | |
| ! | CGAGAAACATTTTCCTTCCC+GGG | - | chr1.1:76781971-76781990 | MS.gene76840:CDS | 45.0% |
| ! | GAGGATAGGGGGAGAATTTT+GGG | - | chr1.1:76782430-76782449 | MS.gene76840:CDS | 45.0% |
| !! | AATATGACGGGCCAAGAAGT+GGG | - | chr1.1:76782239-76782258 | MS.gene76840:CDS | 45.0% |
| !! | TAATATGACGGGCCAAGAAG+TGG | - | chr1.1:76782238-76782257 | MS.gene76840:CDS | 45.0% |
| AAGCTTCAGCGAAGTCTTCG+AGG | - | chr1.1:76782138-76782157 | MS.gene76840:CDS | 50.0% | |
| ACCGACCCGCTCTTACTAAA+TGG | + | chr1.1:76782332-76782351 | None:intergenic | 50.0% | |
| ACCTGCCTGACCAAGCAAAA+GGG | - | chr1.1:76782459-76782478 | MS.gene76840:CDS | 50.0% | |
| ACTGCACGTGTGCTTCCAAT+TGG | + | chr1.1:76781833-76781852 | None:intergenic | 50.0% | |
| AGAATGGATCAAGACGCGGA+GGG | - | chr1.1:76782182-76782201 | MS.gene76840:CDS | 50.0% | |
| ATGATCCATGCTATGGGCTC+TGG | + | chr1.1:76781351-76781370 | None:intergenic | 50.0% | |
| ATGGAGAAGAAGTAGGGTGG+AGG | - | chr1.1:76782372-76782391 | MS.gene76840:CDS | 50.0% | |
| CAAGTGCTATCGTGTGCTGT+GGG | + | chr1.1:76781300-76781319 | None:intergenic | 50.0% | |
| CATTCCACTCTACTGAGCTG+GGG | + | chr1.1:76781020-76781039 | None:intergenic | 50.0% | |
| CCAAAAACCTTGAGACTCCG+TGG | + | chr1.1:76781691-76781710 | None:intergenic | 50.0% | |
| CTCAAAGCAGAGCGAACTTC+TGG | - | chr1.1:76781108-76781127 | MS.gene76840:CDS | 50.0% | |
| CTCATTCCACTCTACTGAGC+TGG | + | chr1.1:76781022-76781041 | None:intergenic | 50.0% | |
| CTTGAGTTTGGGTCGGTCTA+CGG | - | chr1.1:76782040-76782059 | MS.gene76840:CDS | 50.0% | |
| GACAACGCAGTTTCGAGAAC+CGG | + | chr1.1:76781501-76781520 | None:intergenic | 50.0% | |
| GTGTTGAAGTGGAGGATAGG+GGG | - | chr1.1:76782419-76782438 | MS.gene76840:CDS | 50.0% | |
| TACCTGCCTGACCAAGCAAA+AGG | - | chr1.1:76782458-76782477 | MS.gene76840:CDS | 50.0% | |
| TCAAACCAGAGCCCATAGCA+TGG | - | chr1.1:76781343-76781362 | MS.gene76840:CDS | 50.0% | |
| TCTGTTTCATGCGCACCCTT+GGG | - | chr1.1:76781580-76781599 | MS.gene76840:CDS | 50.0% | |
| TGAAACTGGCGCGAAACTAC+GGG | - | chr1.1:76781742-76781761 | MS.gene76840:CDS | 50.0% | |
| ! | AACATTTTCCTTCCCGGGCT+CGG | - | chr1.1:76781976-76781995 | MS.gene76840:CDS | 50.0% |
| ! | AAGGGAGTGTGTTGAAGTGG+AGG | - | chr1.1:76782411-76782430 | MS.gene76840:CDS | 50.0% |
| ! | ACCCGATTCATGGGTTGAAG+GGG | - | chr1.1:76782285-76782304 | MS.gene76840:CDS | 50.0% |
| ! | ATTGGAAGCACACGTGCAGT+TGG | - | chr1.1:76781833-76781852 | MS.gene76840:CDS | 50.0% |
| ! | CCACGGAGTCTCAAGGTTTT+TGG | - | chr1.1:76781688-76781707 | MS.gene76840:CDS | 50.0% |
| ! | GACCCGATTCATGGGTTGAA+GGG | - | chr1.1:76782284-76782303 | MS.gene76840:CDS | 50.0% |
| ! | GGAGGATAGGGGGAGAATTT+TGG | - | chr1.1:76782429-76782448 | MS.gene76840:CDS | 50.0% |
| ! | TGACCCGATTCATGGGTTGA+AGG | - | chr1.1:76782283-76782302 | MS.gene76840:CDS | 50.0% |
| ! | TGACTCCCTTTTGCTTGGTC+AGG | + | chr1.1:76782467-76782486 | None:intergenic | 50.0% |
| ! | TGGAAGGGAGTGTGTTGAAG+TGG | - | chr1.1:76782408-76782427 | MS.gene76840:CDS | 50.0% |
| AACTCCCCAGCTCAGTAGAG+TGG | - | chr1.1:76781013-76781032 | MS.gene76840:CDS | 55.0% | |
| ACGGGTGATGACCCGATTCA+TGG | - | chr1.1:76782275-76782294 | MS.gene76840:CDS | 55.0% | |
| AGCGGGTCGGTTGTAATAGC+AGG | - | chr1.1:76782341-76782360 | MS.gene76840:CDS | 55.0% | |
| ATCGTGTGCTGTGGGTGAGT+TGG | + | chr1.1:76781292-76781311 | None:intergenic | 55.0% | |
| CGCCCCTTCAACCCATGAAT+CGG | + | chr1.1:76782290-76782309 | None:intergenic | 55.0% | |
| CGGGTCGGTTGTAATAGCAG+GGG | - | chr1.1:76782343-76782362 | MS.gene76840:CDS | 55.0% | |
| CGGGTGATGACCCGATTCAT+GGG | - | chr1.1:76782276-76782295 | MS.gene76840:CDS | 55.0% | |
| CGTCTCCATGTGGCGAGATT+AGG | - | chr1.1:76781915-76781934 | MS.gene76840:CDS | 55.0% | |
| CTCTGTTTCATGCGCACCCT+TGG | - | chr1.1:76781579-76781598 | MS.gene76840:CDS | 55.0% | |
| GAACCGGAGCAAGTAACGAG+TGG | + | chr1.1:76781485-76781504 | None:intergenic | 55.0% | |
| GAATGGATCAAGACGCGGAG+GGG | - | chr1.1:76782183-76782202 | MS.gene76840:CDS | 55.0% | |
| GAGAATGGATCAAGACGCGG+AGG | - | chr1.1:76782181-76782200 | MS.gene76840:CDS | 55.0% | |
| GCAAGTGCTATCGTGTGCTG+TGG | + | chr1.1:76781301-76781320 | None:intergenic | 55.0% | |
| GCACGTGTGCTTCCAATTGG+TGG | + | chr1.1:76781830-76781849 | None:intergenic | 55.0% | |
| GCCCCTTCAACCCATGAATC+GGG | + | chr1.1:76782289-76782308 | None:intergenic | 55.0% | |
| GCGCGAAACTACGGGCAAAA+CGG | - | chr1.1:76781750-76781769 | MS.gene76840:CDS | 55.0% | |
| GCGGGTCGGTTGTAATAGCA+GGG | - | chr1.1:76782342-76782361 | MS.gene76840:CDS | 55.0% | |
| GGAGGAGTTGGAGTAGGAGT+GGG | + | chr1.1:76781257-76781276 | None:intergenic | 55.0% | |
| GGGTTGAAGGGGCGATATGT+CGG | - | chr1.1:76782296-76782315 | MS.gene76840:CDS | 55.0% | |
| GGTTGAAGGGGCGATATGTC+GGG | - | chr1.1:76782297-76782316 | MS.gene76840:CDS | 55.0% | |
| GTTGAAGGGGCGATATGTCG+GGG | - | chr1.1:76782298-76782317 | MS.gene76840:CDS | 55.0% | |
| TAGAGTGAACCTGCCTCGCT+AGG | + | chr1.1:76781459-76781478 | None:intergenic | 55.0% | |
| TCTTACGCCACGGAGTCTCA+AGG | - | chr1.1:76781681-76781700 | MS.gene76840:CDS | 55.0% | |
| TGAATCGGGTCATCACCCGT+AGG | + | chr1.1:76782275-76782294 | None:intergenic | 55.0% | |
| TGGAGGAGTTGGAGTAGGAG+TGG | + | chr1.1:76781258-76781277 | None:intergenic | 55.0% | |
| TGGCAGGCTTGAGTTTGGGT+CGG | - | chr1.1:76782033-76782052 | MS.gene76840:CDS | 55.0% | |
| ! | ACATTTTCCTTCCCGGGCTC+GGG | - | chr1.1:76781977-76781996 | MS.gene76840:CDS | 55.0% |
| ! | CGGTCTAGCTCACCACCAAT+TGG | - | chr1.1:76781815-76781834 | MS.gene76840:CDS | 55.0% |
| ! | TCCCTTTTGCTTGGTCAGGC+AGG | + | chr1.1:76782463-76782482 | None:intergenic | 55.0% |
| GCTTCCACGAGCCCACTTCT+TGG | + | chr1.1:76782253-76782272 | None:intergenic | 60.0% | |
| GGAGTTGGAGTAGGAGTGGG+AGG | + | chr1.1:76781254-76781273 | None:intergenic | 60.0% | |
| GTTTGGGTGGGCCCGGAAAT+TGG | - | chr1.1:76781999-76782018 | MS.gene76840:CDS | 60.0% | |
| ! | AGTGGGCTCGTGGAAGCCTA+CGG | - | chr1.1:76782256-76782275 | MS.gene76840:CDS | 60.0% |
| GTGGGCTCGTGGAAGCCTAC+GGG | - | chr1.1:76782257-76782276 | MS.gene76840:CDS | 65.0% | |
| TCCTTCCCGGGCTCGGGTTT+GGG | - | chr1.1:76781983-76782002 | MS.gene76840:CDS | 65.0% | |
| TTCCTTCCCGGGCTCGGGTT+TGG | - | chr1.1:76781982-76782001 | MS.gene76840:CDS | 65.0% | |
| ACCCAAACCCGAGCCCGGGA+AGG | + | chr1.1:76781987-76782006 | None:intergenic | 70.0% | |
| TCCCGGGCTCGGGTTTGGGT+GGG | - | chr1.1:76781987-76782006 | MS.gene76840:CDS | 70.0% | |
| TTCCCGGGCTCGGGTTTGGG+TGG | - | chr1.1:76781986-76782005 | MS.gene76840:CDS | 70.0% | |
| ! | CGGGCCAAGAAGTGGGCTCG+TGG | - | chr1.1:76782246-76782265 | MS.gene76840:CDS | 70.0% |
| CGCTTGCGACGCGCCTAGCG+AGG | - | chr1.1:76781443-76781462 | MS.gene76840:CDS | 75.0% | |
| GCCCACCCAAACCCGAGCCC+GGG | + | chr1.1:76781991-76782010 | None:intergenic | 75.0% | |
| GGCCCACCCAAACCCGAGCC+CGG | + | chr1.1:76781992-76782011 | None:intergenic | 75.0% | |
| GGCTCGGGTTTGGGTGGGCC+CGG | - | chr1.1:76781992-76782011 | MS.gene76840:CDS | 75.0% | |
| TGCGACGCGCCTAGCGAGGC+AGG | - | chr1.1:76781447-76781466 | MS.gene76840:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 76780988 | 76782556 | 76780988 | ID=MS.gene76840 |
| chr1.1 | mRNA | 76780988 | 76782556 | 76780988 | ID=MS.gene76840.t1;Parent=MS.gene76840 |
| chr1.1 | exon | 76780988 | 76782556 | 76780988 | ID=MS.gene76840.t1.exon1;Parent=MS.gene76840.t1 |
| chr1.1 | CDS | 76780988 | 76782556 | 76780988 | ID=cds.MS.gene76840.t1;Parent=MS.gene76840.t1 |
| Gene Sequence |
| Protein sequence |
