AlfalfaGEDB | MS.gene49929

M. sativa cultivar XinJiangDaYe / MS.gene49929

KEGG: K06891
GO: GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0019538 GO:0030163 GO:0043170 GO:0044238 GO:0071704 GO:1901564 GO:1901565 GO:1901575
PFAM: PF02617.20

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49929.t1	RHN52844.1	97.5	160	4	0	1	160	47	206	6.10E-81	310.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49929.t1	Q9SX29	74.2	151	33	4	14	160	11	159	1.6e-53	210.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49929.t1	I3SNM6	97.5	160	4	0	1	160	1	160	4.4e-81	310.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049171	MS.gene49929	0.81205	5.15E-51	-1.69E-46
MS.gene049222	MS.gene49929	0.830099	3.55E-55	-1.69E-46
MS.gene049285	MS.gene49929	0.816124	6.50E-52	-1.69E-46
MS.gene049320	MS.gene49929	0.800894	1.16E-48	-1.69E-46
MS.gene049356	MS.gene49929	0.834908	2.28E-56	-1.69E-46
MS.gene049369	MS.gene49929	0.845381	4.21E-59	-1.69E-46
MS.gene049396	MS.gene49929	0.845024	5.26E-59	-1.69E-46
MS.gene049609	MS.gene49929	0.842441	2.58E-58	-1.69E-46
MS.gene049633	MS.gene49929	0.846041	2.79E-59	-1.69E-46
MS.gene049805	MS.gene49929	0.817109	3.91E-52	-1.69E-46
MS.gene050170	MS.gene49929	0.849062	4.12E-60	-1.69E-46
MS.gene050323	MS.gene49929	0.851974	6.25E-61	-1.69E-46
MS.gene050444	MS.gene49929	0.817073	3.98E-52	-1.69E-46
MS.gene050496	MS.gene49929	0.823386	1.42E-53	-1.69E-46
MS.gene050499	MS.gene49929	0.811953	5.41E-51	-1.69E-46
MS.gene050502	MS.gene49929	0.817816	2.71E-52	-1.69E-46
MS.gene050520	MS.gene49929	0.82787	1.23E-54	-1.69E-46
MS.gene050538	MS.gene49929	0.811578	6.53E-51	-1.69E-46
MS.gene050553	MS.gene49929	0.825952	3.54E-54	-1.69E-46
MS.gene050612	MS.gene49929	0.80738	5.20E-50	-1.69E-46
MS.gene050675	MS.gene49929	0.806867	6.68E-50	-1.69E-46
MS.gene050697	MS.gene49929	0.813607	2.35E-51	-1.69E-46
MS.gene050747	MS.gene49929	0.837578	4.79E-57	-1.69E-46
MS.gene050772	MS.gene49929	0.850111	2.10E-60	-1.69E-46
MS.gene050809	MS.gene49929	-0.827524	1.49E-54	-1.69E-46
MS.gene05080	MS.gene49929	0.870257	1.67E-66	-1.69E-46
MS.gene05081	MS.gene49929	0.862501	4.85E-64	-1.69E-46
MS.gene050868	MS.gene49929	0.871946	4.64E-67	-1.69E-46
MS.gene050871	MS.gene49929	0.87182	5.11E-67	-1.69E-46
MS.gene050904	MS.gene49929	0.80295	4.40E-49	-1.69E-46
MS.gene050950	MS.gene49929	0.833145	6.31E-56	-1.69E-46
MS.gene05105	MS.gene49929	0.819355	1.21E-52	-1.69E-46
MS.gene051268	MS.gene49929	0.839847	1.24E-57	-1.69E-46
MS.gene051438	MS.gene49929	0.811127	8.18E-51	-1.69E-46
MS.gene051617	MS.gene49929	0.804718	1.89E-49	-1.69E-46
MS.gene051666	MS.gene49929	0.801262	9.78E-49	-1.69E-46
MS.gene051734	MS.gene49929	0.823297	1.49E-53	-1.69E-46
MS.gene051838	MS.gene49929	0.885153	1.04E-71	-1.69E-46
MS.gene051858	MS.gene49929	0.83202	1.20E-55	-1.69E-46
MS.gene051874	MS.gene49929	0.858203	9.68E-63	-1.69E-46
MS.gene051941	MS.gene49929	0.837117	6.28E-57	-1.69E-46
MS.gene052136	MS.gene49929	0.819957	8.84E-53	-1.69E-46
MS.gene052164	MS.gene49929	0.824062	9.89E-54	-1.69E-46
MS.gene052346	MS.gene49929	0.84753	1.09E-59	-1.69E-46
MS.gene052414	MS.gene49929	0.83805	3.62E-57	-1.69E-46
MS.gene052469	MS.gene49929	0.816297	5.95E-52	-1.69E-46
MS.gene052503	MS.gene49929	0.809523	1.81E-50	-1.69E-46
MS.gene052506	MS.gene49929	0.806261	8.96E-50	-1.69E-46
MS.gene052615	MS.gene49929	0.837622	4.66E-57	-1.69E-46
MS.gene052822	MS.gene49929	0.817111	3.91E-52	-1.69E-46
MS.gene052823	MS.gene49929	0.806968	6.36E-50	-1.69E-46
MS.gene052825	MS.gene49929	0.804287	2.32E-49	-1.69E-46
MS.gene052870	MS.gene49929	0.877147	7.93E-69	-1.69E-46
MS.gene052872	MS.gene49929	0.881187	2.96E-70	-1.69E-46
MS.gene052966	MS.gene49929	0.855157	7.61E-62	-1.69E-46
MS.gene052999	MS.gene49929	0.813025	3.15E-51	-1.69E-46
MS.gene053203	MS.gene49929	0.808746	2.66E-50	-1.69E-46
MS.gene053207	MS.gene49929	0.820295	7.40E-53	-1.69E-46
MS.gene053318	MS.gene49929	0.814692	1.35E-51	-1.69E-46
MS.gene053436	MS.gene49929	0.801695	7.98E-49	-1.69E-46
MS.gene053449	MS.gene49929	0.853364	2.51E-61	-1.69E-46
MS.gene053479	MS.gene49929	0.862017	6.82E-64	-1.69E-46
MS.gene053480	MS.gene49929	0.833455	5.28E-56	-1.69E-46
MS.gene053574	MS.gene49929	0.841208	5.46E-58	-1.69E-46
MS.gene053626	MS.gene49929	0.824326	8.58E-54	-1.69E-46
MS.gene053632	MS.gene49929	0.825246	5.20E-54	-1.69E-46
MS.gene053824	MS.gene49929	0.89795	8.55E-77	-1.69E-46
MS.gene053912	MS.gene49929	0.851523	8.40E-61	-1.69E-46
MS.gene053916	MS.gene49929	0.872617	2.77E-67	-1.69E-46
MS.gene054408	MS.gene49929	0.831874	1.30E-55	-1.69E-46
MS.gene054595	MS.gene49929	0.819645	1.04E-52	-1.69E-46
MS.gene054600	MS.gene49929	0.836295	1.02E-56	-1.69E-46
MS.gene054706	MS.gene49929	-0.801619	8.27E-49	-1.69E-46
MS.gene05494	MS.gene49929	0.999316	9.92E-303	-1.69E-46
MS.gene05505	MS.gene49929	0.851049	1.14E-60	-1.69E-46
MS.gene055206	MS.gene49929	0.837642	4.61E-57	-1.69E-46
MS.gene055224	MS.gene49929	0.873952	9.87E-68	-1.69E-46
MS.gene055289	MS.gene49929	0.817286	3.57E-52	-1.69E-46
MS.gene055362	MS.gene49929	0.802101	6.58E-49	-1.69E-46
MS.gene055502	MS.gene49929	0.805457	1.32E-49	-1.69E-46
MS.gene055577	MS.gene49929	0.845382	4.21E-59	-1.69E-46
MS.gene055722	MS.gene49929	0.836575	8.64E-57	-1.69E-46
MS.gene055741	MS.gene49929	0.867851	1.01E-65	-1.69E-46
MS.gene055744	MS.gene49929	0.861614	9.06E-64	-1.69E-46
MS.gene055748	MS.gene49929	0.827383	1.61E-54	-1.69E-46
MS.gene055750	MS.gene49929	0.837677	4.51E-57	-1.69E-46
MS.gene055751	MS.gene49929	0.827695	1.36E-54	-1.69E-46
MS.gene05589	MS.gene49929	0.851099	1.11E-60	-1.69E-46
MS.gene055909	MS.gene49929	0.841022	6.11E-58	-1.69E-46
MS.gene055911	MS.gene49929	0.8339	4.09E-56	-1.69E-46
MS.gene05592	MS.gene49929	0.802714	4.92E-49	-1.69E-46
MS.gene055941	MS.gene49929	0.854131	1.51E-61	-1.69E-46
MS.gene056166	MS.gene49929	0.82463	7.27E-54	-1.69E-46
MS.gene056283	MS.gene49929	0.813397	2.61E-51	-1.69E-46
MS.gene056387	MS.gene49929	0.874038	9.23E-68	-1.69E-46
MS.gene056422	MS.gene49929	0.813676	2.27E-51	-1.69E-46
MS.gene056446	MS.gene49929	0.813161	2.94E-51	-1.69E-46
MS.gene056448	MS.gene49929	0.823038	1.72E-53	-1.69E-46
MS.gene056449	MS.gene49929	0.841673	4.12E-58	-1.69E-46
MS.gene056487	MS.gene49929	0.821783	3.36E-53	-1.69E-46
MS.gene056504	MS.gene49929	0.84359	1.28E-58	-1.69E-46
MS.gene056510	MS.gene49929	0.811094	8.31E-51	-1.69E-46
MS.gene056511	MS.gene49929	0.817261	3.62E-52	-1.69E-46
MS.gene05664	MS.gene49929	0.808861	2.52E-50	-1.69E-46
MS.gene056657	MS.gene49929	0.807651	4.56E-50	-1.69E-46
MS.gene05666	MS.gene49929	0.823294	1.50E-53	-1.69E-46
MS.gene056946	MS.gene49929	0.800329	1.52E-48	-1.69E-46
MS.gene056947	MS.gene49929	0.813831	2.10E-51	-1.69E-46
MS.gene057019	MS.gene49929	0.82302	1.73E-53	-1.69E-46
MS.gene057076	MS.gene49929	0.86323	2.89E-64	-1.69E-46
MS.gene057086	MS.gene49929	0.833136	6.34E-56	-1.69E-46
MS.gene057124	MS.gene49929	0.806214	9.17E-50	-1.69E-46
MS.gene057289	MS.gene49929	0.836965	6.87E-57	-1.69E-46
MS.gene057658	MS.gene49929	0.804657	1.94E-49	-1.69E-46
MS.gene057734	MS.gene49929	0.845271	4.51E-59	-1.69E-46
MS.gene057856	MS.gene49929	0.800615	1.33E-48	-1.69E-46
MS.gene057857	MS.gene49929	0.813077	3.07E-51	-1.69E-46
MS.gene05787	MS.gene49929	0.825062	5.75E-54	-1.69E-46
MS.gene057926	MS.gene49929	0.806344	8.61E-50	-1.69E-46
MS.gene058090	MS.gene49929	0.810677	1.02E-50	-1.69E-46
MS.gene058120	MS.gene49929	0.871623	5.93E-67	-1.69E-46
MS.gene058130	MS.gene49929	0.870031	1.98E-66	-1.69E-46
MS.gene058157	MS.gene49929	0.826719	2.33E-54	-1.69E-46
MS.gene058338	MS.gene49929	0.849312	3.50E-60	-1.69E-46
MS.gene058376	MS.gene49929	0.809332	1.99E-50	-1.69E-46
MS.gene05837	MS.gene49929	0.848197	7.15E-60	-1.69E-46
MS.gene058419	MS.gene49929	0.804457	2.14E-49	-1.69E-46
MS.gene058448	MS.gene49929	0.81699	4.16E-52	-1.69E-46
MS.gene058723	MS.gene49929	0.820412	6.95E-53	-1.69E-46
MS.gene058773	MS.gene49929	0.824532	7.67E-54	-1.69E-46
MS.gene058838	MS.gene49929	0.846314	2.35E-59	-1.69E-46
MS.gene058948	MS.gene49929	0.863124	3.11E-64	-1.69E-46
MS.gene059022	MS.gene49929	0.807328	5.33E-50	-1.69E-46
MS.gene059023	MS.gene49929	0.855464	6.20E-62	-1.69E-46
MS.gene059129	MS.gene49929	0.808604	2.85E-50	-1.69E-46
MS.gene05913	MS.gene49929	0.837023	6.64E-57	-1.69E-46
MS.gene059305	MS.gene49929	0.856201	3.78E-62	-1.69E-46
MS.gene05934	MS.gene49929	0.813019	3.16E-51	-1.69E-46
MS.gene059367	MS.gene49929	0.830366	3.06E-55	-1.69E-46
MS.gene059368	MS.gene49929	0.831586	1.53E-55	-1.69E-46
MS.gene059667	MS.gene49929	0.833846	4.22E-56	-1.69E-46
MS.gene059674	MS.gene49929	0.833729	4.51E-56	-1.69E-46
MS.gene059680	MS.gene49929	0.813739	2.20E-51	-1.69E-46
MS.gene059711	MS.gene49929	0.819142	1.36E-52	-1.69E-46
MS.gene059718	MS.gene49929	0.830104	3.54E-55	-1.69E-46
MS.gene059865	MS.gene49929	0.81764	2.97E-52	-1.69E-46
MS.gene059902	MS.gene49929	0.820416	6.94E-53	-1.69E-46
MS.gene06000	MS.gene49929	0.830523	2.80E-55	-1.69E-46
MS.gene06027	MS.gene49929	0.804609	1.99E-49	-1.69E-46
MS.gene060372	MS.gene49929	0.841612	4.28E-58	-1.69E-46
MS.gene060482	MS.gene49929	0.806611	7.56E-50	-1.69E-46
MS.gene060762	MS.gene49929	0.828589	8.27E-55	-1.69E-46
MS.gene060778	MS.gene49929	0.845401	4.16E-59	-1.69E-46
MS.gene06077	MS.gene49929	0.809989	1.44E-50	-1.69E-46
MS.gene060835	MS.gene49929	0.837564	4.83E-57	-1.69E-46
MS.gene060837	MS.gene49929	0.858895	6.02E-63	-1.69E-46
MS.gene06092	MS.gene49929	0.822113	2.82E-53	-1.69E-46
MS.gene06097	MS.gene49929	0.843053	1.77E-58	-1.69E-46
MS.gene060982	MS.gene49929	0.829832	4.13E-55	-1.69E-46
MS.gene061041	MS.gene49929	0.810225	1.28E-50	-1.69E-46
MS.gene061154	MS.gene49929	0.804625	1.97E-49	-1.69E-46
MS.gene061218	MS.gene49929	0.808013	3.82E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49929.t1	MTR_6g085050	97.500	160	4	0	1	160	1	160	9.24e-116	324
MS.gene49929.t1	MTR_5g054770	69.536	151	37	4	14	160	11	156	2.88e-70	209

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene49929.t1	AT1G68660	74.172	151	33	4	14	160	11	159	1.45e-74	220
MS.gene49929.t1	AT1G68660	55.629	151	31	5	14	160	11	129	1.54e-46	148

Find 29 sgRNAs with CRISPR-Local

Find 102 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
ATTACAGGTGATAAATATTT+TGG	0.160796	6.4:-59136231	MS.gene49929:intron
ATGCAAGAAGCACATATTAA+TGG	0.300616	6.4:-59134559	MS.gene49929:CDS
ACTGCGTAATGAAGCTTTCA+TGG	0.321586	6.4:+59136870	None:intergenic
GTTTCAAACAAGGCAAAGAT+AGG	0.391817	6.4:-59136209	MS.gene49929:CDS
GCAATATCAACTGTCATTCC+AGG	0.427583	6.4:+59134592	None:intergenic
TGCATGCAATTGAGAGGAAA+TGG	0.433575	6.4:-59134490	MS.gene49929:CDS
GAGAATCTGAATTTGACTTA+AGG	0.436402	6.4:-59136101	MS.gene49929:intron
GAGTGGATGCATTGAGTAGT+TGG	0.453547	6.4:+59136818	None:intergenic
TGGAAAAGGTGGTGGTTTGT+TGG	0.476679	6.4:-59136160	MS.gene49929:CDS
TTGTGTAGCATTACTCTGTA+TGG	0.492187	6.4:+59134667	None:intergenic
GTCAAATTCAGATTCTCGAC+CGG	0.494941	6.4:+59136107	None:intergenic
TTCCTCTCAATTGCATGCAA+TGG	0.502233	6.4:+59134494	None:intergenic
CTACTCAATGCATCCACTCC+TGG	0.512586	6.4:-59136814	MS.gene49929:intron
TTAGGTGAAATTAGAGCAAG+TGG	0.519142	6.4:+59136841	None:intergenic
ACAATGGTAGCCAGTGGAAA+AGG	0.527330	6.4:-59136174	MS.gene49929:CDS
ACTCAACAACCACCATCAGC+TGG	0.532785	6.4:+59134448	None:intergenic
AGTTCAATTGAGCCAGCTGA+TGG	0.556313	6.4:-59134460	MS.gene49929:CDS
GATGCATTGAGTAGTTGGTT+AGG	0.562303	6.4:+59136823	None:intergenic
TAGGAGTATTGTAATGACAA+TGG	0.592311	6.4:-59136190	MS.gene49929:CDS
TCAAATTCAGATTCTCGACC+GGG	0.594401	6.4:+59136108	None:intergenic
GTAGCCAGTGGAAAAGGTGG+TGG	0.601202	6.4:-59136168	MS.gene49929:CDS
GACCATTGCATGCAATTGAG+AGG	0.614338	6.4:-59134496	MS.gene49929:CDS
ATGGTAGCCAGTGGAAAAGG+TGG	0.632586	6.4:-59136171	MS.gene49929:CDS
GTGTTGATGAAAGTGATACC+TGG	0.634232	6.4:-59134610	MS.gene49929:CDS
TGTGTTATAATTACCAGGAG+TGG	0.636157	6.4:+59136801	None:intergenic
TGTAGCATTACTCTGTATGG+TGG	0.656579	6.4:+59134670	None:intergenic
ACATATTAATGGATTAGCAG+TGG	0.658551	6.4:-59134548	MS.gene49929:CDS
TCAATTGAGCCAGCTGATGG+TGG	0.665740	6.4:-59134457	MS.gene49929:CDS
GTAATGACAATGGTAGCCAG+TGG	0.683809	6.4:-59136180	MS.gene49929:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAAATGAAAATATTATTG+TGG	+	chr6.4:59136001-59136020	None:intergenic	10.0%
!!	AATTACTAACATTTAATAAT+AGG	-	chr6.4:59135974-59135993	MS.gene49929:intron	10.0%
!!	CCTAAAATTATAATAATAAA+GGG	-	chr6.4:59134864-59134883	MS.gene49929:intron	10.0%
!!	TCCTAAAATTATAATAATAA+AGG	-	chr6.4:59134863-59134882	MS.gene49929:intron	10.0%
!!!	ACTAGTAAATTATTTTATTA+GGG	-	chr6.4:59135721-59135740	MS.gene49929:intron	10.0%
!!	ATAGATTAAATATCAAAGAT+AGG	-	chr6.4:59134930-59134949	MS.gene49929:intron	15.0%
!!	CATATAAAATTTGTAATTAC+AGG	-	chr6.4:59135072-59135091	MS.gene49929:intron	15.0%
!!	TCGTTAAAAAAATTGTATTA+AGG	-	chr6.4:59135031-59135050	MS.gene49929:intron	15.0%
!!!	CACTAGTAAATTATTTTATT+AGG	-	chr6.4:59135720-59135739	MS.gene49929:intron	15.0%
!!!	CCCTTTATTATTATAATTTT+AGG	+	chr6.4:59134867-59134886	None:intergenic	15.0%
!!	AATAATTATCTAGTTGTTAG+AGG	-	chr6.4:59134637-59134656	MS.gene49929:CDS	20.0%
!!	ACATAATCACATTAATTGAA+AGG	-	chr6.4:59136203-59136222	MS.gene49929:CDS	20.0%
!!	ATTGTTTCAGTATATAAACT+CGG	-	chr6.4:59134715-59134734	MS.gene49929:intron	20.0%
!!	TCATTAACATTAGAAATTAG+TGG	-	chr6.4:59136336-59136355	MS.gene49929:intron	20.0%
!!!	AAATATTTTGGTTTCAAACA+AGG	-	chr6.4:59135099-59135118	MS.gene49929:intron	20.0%
!!!	AAATTTGAAGCTGTTTTTTT+AGG	+	chr6.4:59135649-59135668	None:intergenic	20.0%
!!!	AATATTTTCTTCAATTGAGT+TGG	+	chr6.4:59134790-59134809	None:intergenic	20.0%
!!!	ATTACAGGTGATAAATATTT+TGG	-	chr6.4:59135087-59135106	MS.gene49929:intron	20.0%
!!!	CAAAATTTTGATGTGAAATA+TGG	+	chr6.4:59135397-59135416	None:intergenic	20.0%
!!!	GTTTTATTGTTTTTGTTACT+AGG	-	chr6.4:59136607-59136626	MS.gene49929:intron	20.0%
!	ACAAGGAAATACAAAGAAAA+GGG	+	chr6.4:59136174-59136193	None:intergenic	25.0%
!	ACAATAAAACATGTCATCAA+AGG	+	chr6.4:59136597-59136616	None:intergenic	25.0%
!	ACATAATTAGTTGTCAAAAG+TGG	-	chr6.4:59136034-59136053	MS.gene49929:intron	25.0%
!	ACATTAGAAGTTGAAAGATT+AGG	-	chr6.4:59135445-59135464	MS.gene49929:intron	25.0%
!	ACTGAACTTCAAATTATACA+AGG	+	chr6.4:59134670-59134689	None:intergenic	25.0%
!	AGAGATCGAAAATATCAAAT+TGG	-	chr6.4:59136299-59136318	MS.gene49929:intron	25.0%
!	ATTGATGAAATTGTGTAAGA+AGG	-	chr6.4:59134807-59134826	MS.gene49929:intron	25.0%
!	CATTAGAAGTTGAAAGATTA+GGG	-	chr6.4:59135446-59135465	MS.gene49929:intron	25.0%
!	CATTGTTTATGTAGTTACAT+AGG	+	chr6.4:59136254-59136273	None:intergenic	25.0%
!	CTGAACTTCAAATTATACAA+GGG	+	chr6.4:59134669-59134688	None:intergenic	25.0%
!	TAATGTTATCGTTAGAGTAA+TGG	+	chr6.4:59135431-59135450	None:intergenic	25.0%
!	TAGTAACCGATAACAAAATT+TGG	-	chr6.4:59136406-59136425	MS.gene49929:intron	25.0%
!	TGATTAACGAGCTTAATTTA+TGG	+	chr6.4:59134760-59134779	None:intergenic	25.0%
!	TTGTTTCAGTATATAAACTC+GGG	-	chr6.4:59134716-59134735	MS.gene49929:intron	25.0%
!	TTTCAACATTGTTATACACA+TGG	+	chr6.4:59135934-59135953	None:intergenic	25.0%
!!	AAGTTGAGAAAATCATTTTG+TGG	-	chr6.4:59136113-59136132	MS.gene49929:CDS	25.0%
!!	TAACTGAAATACATTTTCAC+TGG	+	chr6.4:59134978-59134997	None:intergenic	25.0%
!!!	TAGGAGTATTATAATGACTA+TGG	-	chr6.4:59134949-59134968	MS.gene49929:intron	25.0%
	ACAAAATTTGGTCGCTAAAT+TGG	-	chr6.4:59136418-59136437	MS.gene49929:intron	30.0%
	AGTACACCTCAAATTGTAAA+AGG	+	chr6.4:59135693-59135712	None:intergenic	30.0%
	CACAAGCATTAATATCTTGT+TGG	+	chr6.4:59136495-59136514	None:intergenic	30.0%
	GACAAGGAAATACAAAGAAA+AGG	+	chr6.4:59136175-59136194	None:intergenic	30.0%
	GATTATGTGATATCATGACA+AGG	+	chr6.4:59136191-59136210	None:intergenic	30.0%
	GCTCTAACTAAAATTTGACT+CGG	-	chr6.4:59135522-59135541	MS.gene49929:intron	30.0%
	GTTCAATGGGAAGAATATAA+TGG	+	chr6.4:59135783-59135802	None:intergenic	30.0%
	TCAGTCGAGTTAATTAAAGT+CGG	-	chr6.4:59134685-59134704	MS.gene49929:CDS	30.0%
!	ACAATTTGAGGTGTACTTAA+GGG	-	chr6.4:59135696-59135715	MS.gene49929:intron	30.0%
!	ACTTCACATGTTTAGTTCAA+TGG	+	chr6.4:59135797-59135816	None:intergenic	30.0%
!	ATGCAAGAAGCACATATTAA+TGG	-	chr6.4:59136759-59136778	MS.gene49929:intron	30.0%
!	CTTCACATGTTTAGTTCAAT+GGG	+	chr6.4:59135796-59135815	None:intergenic	30.0%
!	GAGAATCTGAATTTGACTTA+AGG	-	chr6.4:59135217-59135236	MS.gene49929:intron	30.0%
!	TACAATTTGAGGTGTACTTA+AGG	-	chr6.4:59135695-59135714	MS.gene49929:intron	30.0%
!!	ACATATTAATGGATTAGCAG+TGG	-	chr6.4:59136770-59136789	MS.gene49929:intron	30.0%
!!	TAGCGACCAAATTTTGTTAT+CGG	+	chr6.4:59136415-59136434	None:intergenic	30.0%
!!	TAGGAGTATTGTAATGACAA+TGG	-	chr6.4:59135128-59135147	MS.gene49929:intron	30.0%
!!!	ATTTCTATTTTTCAAGCCAG+TGG	-	chr6.4:59136527-59136546	MS.gene49929:intron	30.0%
	ACACATGCAGAAAGATAGAT+AGG	+	chr6.4:59136148-59136167	None:intergenic	35.0%
	ACCATAGAAAAAACAACACC+CGG	-	chr6.4:59135192-59135211	MS.gene49929:intron	35.0%
	AGAAGAAGCAATATAGAGAG+TGG	+	chr6.4:59134544-59134563	None:intergenic	35.0%
	ATCAATATGACGCGACAAAT+TGG	+	chr6.4:59135373-59135392	None:intergenic	35.0%
	ATTGTTATACACATGGAGGA+TGG	+	chr6.4:59135927-59135946	None:intergenic	35.0%
	CAACATTGTTATACACATGG+AGG	+	chr6.4:59135931-59135950	None:intergenic	35.0%
	CACAACTATTATAGCAGACA+AGG	+	chr6.4:59135875-59135894	None:intergenic	35.0%
	CTTGTCTGCTATAATAGTTG+TGG	-	chr6.4:59135873-59135892	MS.gene49929:intron	35.0%
	GTGGATGTGTTATAATTACC+AGG	+	chr6.4:59134525-59134544	None:intergenic	35.0%
	GTTTCAAACAAGGCAAAGAT+AGG	-	chr6.4:59135109-59135128	MS.gene49929:intron	35.0%
	TGTGTTATAATTACCAGGAG+TGG	+	chr6.4:59134520-59134539	None:intergenic	35.0%
	TTAGGTGAAATTAGAGCAAG+TGG	+	chr6.4:59134480-59134499	None:intergenic	35.0%
	TTGTGTAGCATTACTCTGTA+TGG	+	chr6.4:59136654-59136673	None:intergenic	35.0%
!	CTGCATCCTTTTACAATTTG+AGG	-	chr6.4:59135684-59135703	MS.gene49929:intron	35.0%
!!	TTTGACTCGGAGAATCTTTA+AGG	-	chr6.4:59135535-59135554	MS.gene49929:intron	35.0%
!!!	AGGTTTTGAACTATGATGCA+TGG	+	chr6.4:59136577-59136596	None:intergenic	35.0%
!!!	GGTGTTGTTTTTTCTATGGT+TGG	+	chr6.4:59135192-59135211	None:intergenic	35.0%
!!!	GTTGTTTTTTCTATGGTTGG+AGG	+	chr6.4:59135189-59135208	None:intergenic	35.0%
	ATGCTCGTTAGGTTCTTAGA+CGG	-	chr6.4:59135588-59135607	MS.gene49929:intron	40.0%
	GATGCATTGAGTAGTTGGTT+AGG	+	chr6.4:59134498-59134517	None:intergenic	40.0%
	GCAATATCAACTGTCATTCC+AGG	+	chr6.4:59136729-59136748	None:intergenic	40.0%
	GCAATGTAATGCGTTCATGT+TGG	+	chr6.4:59135504-59135523	None:intergenic	40.0%
	GCTATAATAGTTGTGGTCAC+TGG	-	chr6.4:59135880-59135899	MS.gene49929:intron	40.0%
	GGATAGAAAGAATGCTCGTT+AGG	-	chr6.4:59135577-59135596	MS.gene49929:intron	40.0%
	GTCAAATTCAGATTCTCGAC+CGG	+	chr6.4:59135214-59135233	None:intergenic	40.0%
	TCAAATTCAGATTCTCGACC+GGG	+	chr6.4:59135213-59135232	None:intergenic	40.0%
	TGCATGCAATTGAGAGGAAA+TGG	-	chr6.4:59136828-59136847	MS.gene49929:CDS	40.0%
	TGTAGCATTACTCTGTATGG+TGG	+	chr6.4:59136651-59136670	None:intergenic	40.0%
	TTCCTCTCAATTGCATGCAA+TGG	+	chr6.4:59136827-59136846	None:intergenic	40.0%
!	GTGTTGATGAAAGTGATACC+TGG	-	chr6.4:59136708-59136727	MS.gene49929:intron	40.0%
!!	CGGAGAATCTTTAAGGTCTT+GGG	-	chr6.4:59135542-59135561	MS.gene49929:intron	40.0%
!!	TCGGAGAATCTTTAAGGTCT+TGG	-	chr6.4:59135541-59135560	MS.gene49929:intron	40.0%
!!!	ACCGGGTGTTGTTTTTTCTA+TGG	+	chr6.4:59135196-59135215	None:intergenic	40.0%
	ACAATGGTAGCCAGTGGAAA+AGG	-	chr6.4:59135144-59135163	MS.gene49929:intron	45.0%
	ACGAACATCATATACGCCAC+TGG	+	chr6.4:59136546-59136565	None:intergenic	45.0%
	AGTTCAATTGAGCCAGCTGA+TGG	-	chr6.4:59136858-59136877	MS.gene49929:CDS	45.0%
	GACCATTGCATGCAATTGAG+AGG	-	chr6.4:59136822-59136841	MS.gene49929:CDS	45.0%
	GAGTGGATGCATTGAGTAGT+TGG	+	chr6.4:59134503-59134522	None:intergenic	45.0%
	GTAATGACAATGGTAGCCAG+TGG	-	chr6.4:59135138-59135157	MS.gene49929:intron	45.0%
!	TGGAAAAGGTGGTGGTTTGT+TGG	-	chr6.4:59135158-59135177	MS.gene49929:intron	45.0%
	ATGGTAGCCAGTGGAAAAGG+TGG	-	chr6.4:59135147-59135166	MS.gene49929:intron	50.0%
	CTACTCAATGCATCCACTCC+TGG	-	chr6.4:59134504-59134523	MS.gene49929:CDS	50.0%
	TCAATTGAGCCAGCTGATGG+TGG	-	chr6.4:59136861-59136880	MS.gene49929:CDS	50.0%
!	CAAACCACCACCTTTTCCAC+TGG	+	chr6.4:59135157-59135176	None:intergenic	50.0%
	GGTCTTGGGTCTGAGTCTTG+TGG	-	chr6.4:59135556-59135575	MS.gene49929:intron	55.0%
	GTAGCCAGTGGAAAAGGTGG+TGG	-	chr6.4:59135150-59135169	MS.gene49929:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr6.4	gene	59134450	59136890	59134450	ID=MS.gene49929
chr6.4	mRNA	59134450	59136890	59134450	ID=MS.gene49929.t1;Parent=MS.gene49929
chr6.4	exon	59136815	59136890	59136815	ID=MS.gene49929.t1.exon1;Parent=MS.gene49929.t1
chr6.4	CDS	59136815	59136890	59136815	ID=cds.MS.gene49929.t1;Parent=MS.gene49929.t1
chr6.4	exon	59136102	59136246	59136102	ID=MS.gene49929.t1.exon2;Parent=MS.gene49929.t1
chr6.4	CDS	59136102	59136246	59136102	ID=cds.MS.gene49929.t1;Parent=MS.gene49929.t1
chr6.4	exon	59134450	59134711	59134450	ID=MS.gene49929.t1.exon3;Parent=MS.gene49929.t1
chr6.4	CDS	59134450	59134711	59134450	ID=cds.MS.gene49929.t1;Parent=MS.gene49929.t1

Gene Sequence

>MS.gene49929

ATGAAAGCTTCATTACGCAGTGCTACTCCACTTGCTCTAATTTCACCTAACCAACTACTCAATGCATCCACTCCTGGTAATTATAACACATCCACTCTCTATATTGCTTCTTCTCACTTTCTTAAATTCAAAACTACTTTGCTTTGTTGATTAATTTCACAAACATCACAAGTTTTATATTTTATTTAATAATTATCTAGTTGTTAGAGGAAAAGTCCCTTGTATAATTTGAAGTTCAGTCGAGTTAATTAAAGTCGGACTAAAGATTGTTTCAGTATATAAACTCGGGTTATTTCAAACACTTTGACCATAAATTAAGCTCGTTAATCAATTGAGTCCAACTCAATTGAAGAAAATATTGATGAAATTGTGTAAGAAGGATATAACTAGTTGTTTTATATTTATGATATTTTTCCTAAAATTATAATAATAAAGGGATATAGAACGTATGCTCGTTAAGATATTTGAGCTCTAATTTTAATAGATTAAATATCAAAGATAGGAGTATTATAATGACTATGGTAGCCAGTGAAAATGTATTTCAGTTAAGACATTTCAGCTCTAATTTTAATAGACATTTCTCGTTAAAAAAATTGTATTAAGGTTCAAATGTTAATTGATACATATAAAATTTGTAATTACAGGTGATAAATATTTTGGTTTCAAACAAGGCAAAGATAGGAGTATTGTAATGACAATGGTAGCCAGTGGAAAAGGTGGTGGTTTGTTGGACAAGCCTCCAACCATAGAAAAAACAACACCCGGTCGAGAATCTGAATTTGACTTAAGGTAATACGAAAAAAGTTATCTTATTTGAACATCAAAATACAGAATGTGATACTGTATATATTTATCTTTATTTTTTTTTCTTACTTTTTATCTTATGTAACTTACACTCATATCAAAAGTATGCATAAATACCAATTTGTCGCGTCATATTGATACCATATTTCACATCAAAATTTTGATGTCAAAGTACCATTACTCTAACGATAACATTAGAAGTTGAAAGATTAGGGTAGTAAACATTACTTTAAATCGTCTCAAATTACCAACATGAACGCATTACATTGCTCTAACTAAAATTTGACTCGGAGAATCTTTAAGGTCTTGGGTCTGAGTCTTGTGGATAGAAAGAATGCTCGTTAGGTTCTTAGACGGACATTAATCATCGACAAGCTAATAGATACTTCACACCTAAAAAAACAGCTTCAAATTTTAAATTCAAATGTTGCTGCATCCTTTTACAATTTGAGGTGTACTTAAGGGACACTAGTAAATTATTTTATTAGGGACTTATATTGATAACATGAGCTATATAGTTCACATTCCATTATATTCTTCCCATTGAACTAAACATGTGAAGTTATTAGAACTGATTAAAGTAGATTGAAAAACATGTTGATCTTTATATTCAAGTTTCCTTGTCTGCTATAATAGTTGTGGTCACTGGTCATTTCAATTGCTAATGATTCCATCCTCCATGTGTATAACAATGTTGAAAATCAGTCTTTTTGCTTTCACAATTACTAACATTTAATAATAGGTCCACAATAATATTTTCATTTTTTTAGATAAACTAAGACATAATTAGTTGTCAAAAGTGGATATATGAATGAATGATTTCTTTTACTTCTTGTCTTTGAAAAGAAGTGTAACTATGAAGTTGAGAAAATCATTTTGTGGAAGCTCATTCCTATCTATCTTTCTGCATGTGTAGTCCCTTTTCTTTGTATTTCCTTGTCATGATATCACATAATCACATTAATTGAAAGGCAAAATGAGTAGTCAAAACTGAAAACCTATGTAACTACATAAACAATGTCATGTCATATATAGCGAGCGATTTAGAGATCGAAAATATCAAATTGGTCGTTAAATCGAGATCATTAACATTAGAAATTAGTGGTTTAACGACATTTCGTAAATCGATCTCTAAATTAATCAAAACTCATTTAGTAACCGATAACAAAATTTGGTCGCTAAATTGGTCGACTAATAGCGATTTTTTAGTACTTCAGATTGAAGACATGTTTCAGTGTCCAACAAGATATTAATGCTTGTGATTATATACATCATTTCTATTTTTCAAGCCAGTGGCGTATATGATGTTCGTGTCTGTATCCATGCATCATAGTTCAAAACCTTTGATGACATGTTTTATTGTTTTTGTTACTAGGAAATCAAAAAAGACATCTCCACCATACAGAGTAATGCTACACAATGACAACTATAACAAAAGAGAATATGTTGTGCAAGTGTTGATGAAAGTGATACCTGGAATGACAGTTGATATTGCAGTTAACGTCATGCAAGAAGCACATATTAATGGATTAGCAGTGGTCATTATTTGTGCTCAAGTTGATGCTGAAGACCATTGCATGCAATTGAGAGGAAATGGTCTTTTAAGTTCAATTGAGCCAGCTGATGGTGGTTGTTGA

Protein sequence

>MS.gene49929.t1

MKASLRSATPLALISPNQLLNASTPGDKYFGFKQGKDRSIVMTMVASGKGGGLLDKPPTIEKTTPGRESEFDLRKSKKTSPPYRVMLHNDNYNKREYVVQVLMKVIPGMTVDIAVNVMQEAHINGLAVVIICAQVDAEDHCMQLRGNGLLSSIEPADGGC