Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46880.t1 | XP_013456310.1 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 1.40E-134 | 488.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46880.t1 | Q96288 | 63.3 | 248 | 83 | 5 | 1 | 240 | 1 | 248 | 1.2e-81 | 304.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46880.t1 | A0A072ULU3 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 1.0e-134 | 488.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene46880.t1 | TF | DBB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene46880 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene46880 | 0.828112 | 1.08E-54 | -1.69E-46 |
| MS.gene049232 | MS.gene46880 | 0.835859 | 1.31E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene46880 | 0.811755 | 5.97E-51 | -1.69E-46 |
| MS.gene049298 | MS.gene46880 | -0.82379 | 1.15E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene46880 | 0.814903 | 1.22E-51 | -1.69E-46 |
| MS.gene04932 | MS.gene46880 | -0.812108 | 5.01E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene46880 | 0.814718 | 1.34E-51 | -1.69E-46 |
| MS.gene049611 | MS.gene46880 | -0.805036 | 1.62E-49 | -1.69E-46 |
| MS.gene049633 | MS.gene46880 | 0.839876 | 1.22E-57 | -1.69E-46 |
| MS.gene05010 | MS.gene46880 | 0.818243 | 2.17E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene46880 | 0.908568 | 1.48E-81 | -1.69E-46 |
| MS.gene050323 | MS.gene46880 | 0.899483 | 1.90E-77 | -1.69E-46 |
| MS.gene050338 | MS.gene46880 | -0.834165 | 3.51E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene46880 | 0.842674 | 2.24E-58 | -1.69E-46 |
| MS.gene050496 | MS.gene46880 | 0.87188 | 4.88E-67 | -1.69E-46 |
| MS.gene050502 | MS.gene46880 | 0.816057 | 6.73E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene46880 | 0.829768 | 4.28E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene46880 | 0.822922 | 1.83E-53 | -1.69E-46 |
| MS.gene050612 | MS.gene46880 | 0.826643 | 2.42E-54 | -1.69E-46 |
| MS.gene050675 | MS.gene46880 | 0.810967 | 8.86E-51 | -1.69E-46 |
| MS.gene050697 | MS.gene46880 | 0.896707 | 2.85E-76 | -1.69E-46 |
| MS.gene050710 | MS.gene46880 | -0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene05080 | MS.gene46880 | 0.826074 | 3.31E-54 | -1.69E-46 |
| MS.gene05081 | MS.gene46880 | 0.828034 | 1.12E-54 | -1.69E-46 |
| MS.gene050868 | MS.gene46880 | 0.90001 | 1.12E-77 | -1.69E-46 |
| MS.gene050871 | MS.gene46880 | 0.902644 | 7.85E-79 | -1.69E-46 |
| MS.gene050904 | MS.gene46880 | 0.852332 | 4.95E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene46880 | 0.813927 | 2.00E-51 | -1.69E-46 |
| MS.gene05104 | MS.gene46880 | -0.803913 | 2.78E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene46880 | -0.825152 | 5.48E-54 | -1.69E-46 |
| MS.gene051268 | MS.gene46880 | 0.875289 | 3.46E-68 | -1.69E-46 |
| MS.gene051317 | MS.gene46880 | 0.835545 | 1.58E-56 | -1.69E-46 |
| MS.gene051439 | MS.gene46880 | -0.839881 | 1.22E-57 | -1.69E-46 |
| MS.gene051651 | MS.gene46880 | -0.830647 | 2.61E-55 | -1.69E-46 |
| MS.gene051734 | MS.gene46880 | 0.823488 | 1.35E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene46880 | 0.861827 | 7.80E-64 | -1.69E-46 |
| MS.gene051863 | MS.gene46880 | -0.836573 | 8.64E-57 | -1.69E-46 |
| MS.gene051874 | MS.gene46880 | 0.820242 | 7.61E-53 | -1.69E-46 |
| MS.gene051941 | MS.gene46880 | 0.846237 | 2.46E-59 | -1.69E-46 |
| MS.gene052066 | MS.gene46880 | 0.809728 | 1.64E-50 | -1.69E-46 |
| MS.gene052100 | MS.gene46880 | 0.854056 | 1.59E-61 | -1.69E-46 |
| MS.gene052129 | MS.gene46880 | -0.828335 | 9.52E-55 | -1.69E-46 |
| MS.gene052164 | MS.gene46880 | 0.846062 | 2.75E-59 | -1.69E-46 |
| MS.gene052482 | MS.gene46880 | 0.818509 | 1.89E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene46880 | 0.823748 | 1.17E-53 | -1.69E-46 |
| MS.gene052494 | MS.gene46880 | -0.802732 | 4.88E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene46880 | 0.846441 | 2.17E-59 | -1.69E-46 |
| MS.gene052822 | MS.gene46880 | 0.809326 | 2.00E-50 | -1.69E-46 |
| MS.gene052823 | MS.gene46880 | 0.849746 | 2.65E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene46880 | 0.848482 | 5.96E-60 | -1.69E-46 |
| MS.gene052870 | MS.gene46880 | 0.826996 | 2.00E-54 | -1.69E-46 |
| MS.gene052872 | MS.gene46880 | 0.840992 | 6.23E-58 | -1.69E-46 |
| MS.gene052966 | MS.gene46880 | 0.841427 | 4.78E-58 | -1.69E-46 |
| MS.gene053108 | MS.gene46880 | -0.805225 | 1.48E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene46880 | 0.831817 | 1.35E-55 | -1.69E-46 |
| MS.gene053420 | MS.gene46880 | -0.827357 | 1.64E-54 | -1.69E-46 |
| MS.gene053421 | MS.gene46880 | -0.812344 | 4.45E-51 | -1.69E-46 |
| MS.gene053479 | MS.gene46880 | 0.865854 | 4.37E-65 | -1.69E-46 |
| MS.gene053480 | MS.gene46880 | 0.861206 | 1.21E-63 | -1.69E-46 |
| MS.gene053574 | MS.gene46880 | 0.805145 | 1.54E-49 | -1.69E-46 |
| MS.gene053626 | MS.gene46880 | 0.802638 | 5.10E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene46880 | 0.822822 | 1.93E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene46880 | 0.869435 | 3.10E-66 | -1.69E-46 |
| MS.gene053916 | MS.gene46880 | 0.825746 | 3.96E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene46880 | 0.810767 | 9.79E-51 | -1.69E-46 |
| MS.gene054344 | MS.gene46880 | 0.806218 | 9.15E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene46880 | 0.821332 | 4.27E-53 | -1.69E-46 |
| MS.gene054706 | MS.gene46880 | -0.858974 | 5.70E-63 | -1.69E-46 |
| MS.gene054707 | MS.gene46880 | -0.805693 | 1.18E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene46880 | 0.857307 | 1.78E-62 | -1.69E-46 |
| MS.gene054941 | MS.gene46880 | -0.856599 | 2.89E-62 | -1.69E-46 |
| MS.gene05494 | MS.gene46880 | 0.867299 | 1.52E-65 | -1.69E-46 |
| MS.gene054954 | MS.gene46880 | 0.829179 | 5.95E-55 | -1.69E-46 |
| MS.gene055158 | MS.gene46880 | -0.803925 | 2.76E-49 | -1.69E-46 |
| MS.gene055202 | MS.gene46880 | -0.810204 | 1.29E-50 | -1.69E-46 |
| MS.gene055224 | MS.gene46880 | 0.828391 | 9.23E-55 | -1.69E-46 |
| MS.gene055362 | MS.gene46880 | 0.804188 | 2.43E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene46880 | 0.815029 | 1.14E-51 | -1.69E-46 |
| MS.gene055577 | MS.gene46880 | 0.842753 | 2.13E-58 | -1.69E-46 |
| MS.gene055741 | MS.gene46880 | 0.819226 | 1.30E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene46880 | 0.808556 | 2.92E-50 | -1.69E-46 |
| MS.gene055748 | MS.gene46880 | 0.845383 | 4.20E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene46880 | 0.848167 | 7.28E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene46880 | 0.855438 | 6.31E-62 | -1.69E-46 |
| MS.gene055776 | MS.gene46880 | 0.827453 | 1.55E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene46880 | 0.917132 | 7.70E-86 | -1.69E-46 |
| MS.gene055941 | MS.gene46880 | 0.81263 | 3.85E-51 | -1.69E-46 |
| MS.gene056046 | MS.gene46880 | 0.830655 | 2.60E-55 | -1.69E-46 |
| MS.gene056166 | MS.gene46880 | 0.824205 | 9.16E-54 | -1.69E-46 |
| MS.gene056198 | MS.gene46880 | -0.82753 | 1.49E-54 | -1.69E-46 |
| MS.gene056283 | MS.gene46880 | 0.841055 | 5.99E-58 | -1.69E-46 |
| MS.gene056387 | MS.gene46880 | 0.998302 | 2.80E-261 | -1.69E-46 |
| MS.gene056446 | MS.gene46880 | 0.81219 | 4.80E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene46880 | 0.811933 | 5.46E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene46880 | 0.903863 | 2.23E-79 | -1.69E-46 |
| MS.gene056510 | MS.gene46880 | 0.825123 | 5.56E-54 | -1.69E-46 |
| MS.gene056583 | MS.gene46880 | -0.823656 | 1.23E-53 | -1.69E-46 |
| MS.gene056618 | MS.gene46880 | -0.869823 | 2.32E-66 | -1.69E-46 |
| MS.gene056657 | MS.gene46880 | 0.815827 | 7.57E-52 | -1.69E-46 |
| MS.gene056688 | MS.gene46880 | -0.817593 | 3.04E-52 | -1.69E-46 |
| MS.gene056694 | MS.gene46880 | -0.822005 | 2.98E-53 | -1.69E-46 |
| MS.gene056697 | MS.gene46880 | -0.824206 | 9.15E-54 | -1.69E-46 |
| MS.gene056856 | MS.gene46880 | -0.811598 | 6.46E-51 | -1.69E-46 |
| MS.gene056857 | MS.gene46880 | -0.825988 | 3.47E-54 | -1.69E-46 |
| MS.gene057019 | MS.gene46880 | 0.801452 | 8.94E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene46880 | 0.811324 | 7.41E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene46880 | 0.84373 | 1.17E-58 | -1.69E-46 |
| MS.gene057367 | MS.gene46880 | -0.808167 | 3.54E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene46880 | 0.815789 | 7.72E-52 | -1.69E-46 |
| MS.gene057717 | MS.gene46880 | -0.818536 | 1.86E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene46880 | 0.806423 | 8.29E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene46880 | 0.803919 | 2.77E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene46880 | 0.809518 | 1.82E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene46880 | 0.852335 | 4.94E-61 | -1.69E-46 |
| MS.gene05787 | MS.gene46880 | 0.846582 | 1.98E-59 | -1.69E-46 |
| MS.gene057926 | MS.gene46880 | 0.800705 | 1.27E-48 | -1.69E-46 |
| MS.gene058099 | MS.gene46880 | -0.814354 | 1.61E-51 | -1.69E-46 |
| MS.gene058157 | MS.gene46880 | 0.877864 | 4.46E-69 | -1.69E-46 |
| MS.gene058171 | MS.gene46880 | -0.830881 | 2.29E-55 | -1.69E-46 |
| MS.gene058173 | MS.gene46880 | -0.826175 | 3.13E-54 | -1.69E-46 |
| MS.gene058175 | MS.gene46880 | -0.835908 | 1.28E-56 | -1.69E-46 |
| MS.gene058334 | MS.gene46880 | -0.832733 | 7.99E-56 | -1.69E-46 |
| MS.gene058338 | MS.gene46880 | 0.818176 | 2.25E-52 | -1.69E-46 |
| MS.gene05837 | MS.gene46880 | 0.828381 | 9.28E-55 | -1.69E-46 |
| MS.gene058382 | MS.gene46880 | -0.815797 | 7.69E-52 | -1.69E-46 |
| MS.gene058418 | MS.gene46880 | -0.807195 | 5.69E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene46880 | 0.806231 | 9.09E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene46880 | 0.801734 | 7.83E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene46880 | 0.838886 | 2.20E-57 | -1.69E-46 |
| MS.gene059022 | MS.gene46880 | 0.819116 | 1.38E-52 | -1.69E-46 |
| MS.gene059023 | MS.gene46880 | 0.843332 | 1.50E-58 | -1.69E-46 |
| MS.gene059045 | MS.gene46880 | -0.821152 | 4.70E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene46880 | 0.824445 | 8.04E-54 | -1.69E-46 |
| MS.gene05926 | MS.gene46880 | -0.858045 | 1.08E-62 | -1.69E-46 |
| MS.gene059305 | MS.gene46880 | 0.825474 | 4.60E-54 | -1.69E-46 |
| MS.gene059367 | MS.gene46880 | 0.814259 | 1.69E-51 | -1.69E-46 |
| MS.gene05960 | MS.gene46880 | -0.805288 | 1.44E-49 | -1.69E-46 |
| MS.gene059667 | MS.gene46880 | 0.848044 | 7.88E-60 | -1.69E-46 |
| MS.gene059677 | MS.gene46880 | 0.815464 | 9.12E-52 | -1.69E-46 |
| MS.gene059699 | MS.gene46880 | -0.833548 | 5.01E-56 | -1.69E-46 |
| MS.gene059703 | MS.gene46880 | -0.843671 | 1.21E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene46880 | 0.870115 | 1.86E-66 | -1.69E-46 |
| MS.gene05995 | MS.gene46880 | 0.803588 | 3.25E-49 | -1.69E-46 |
| MS.gene06000 | MS.gene46880 | 0.898374 | 5.65E-77 | -1.69E-46 |
| MS.gene06027 | MS.gene46880 | 0.830056 | 3.64E-55 | -1.69E-46 |
| MS.gene060405 | MS.gene46880 | -0.825507 | 4.51E-54 | -1.69E-46 |
| MS.gene060595 | MS.gene46880 | -0.822945 | 1.81E-53 | -1.69E-46 |
| MS.gene060703 | MS.gene46880 | 0.805699 | 1.18E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene46880 | 0.860826 | 1.58E-63 | -1.69E-46 |
| MS.gene060778 | MS.gene46880 | 0.886848 | 2.39E-72 | -1.69E-46 |
| MS.gene06077 | MS.gene46880 | 0.838376 | 2.98E-57 | -1.69E-46 |
| MS.gene06097 | MS.gene46880 | 0.861828 | 7.80E-64 | -1.69E-46 |
| MS.gene060982 | MS.gene46880 | 0.879063 | 1.69E-69 | -1.69E-46 |
| MS.gene061044 | MS.gene46880 | -0.83122 | 1.89E-55 | -1.69E-46 |
| MS.gene061218 | MS.gene46880 | 0.846033 | 2.80E-59 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46880.t1 | MTR_4g067320 | 99.167 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 9.11e-179 | 490 |
| MS.gene46880.t1 | MTR_4g067320 | 98.750 | 240 | 2 | 1 | 1 | 240 | 1 | 239 | 5.88e-176 | 483 |
| MS.gene46880.t1 | MTR_2g099010 | 69.262 | 244 | 70 | 3 | 1 | 240 | 1 | 243 | 8.49e-117 | 333 |
| MS.gene46880.t1 | MTR_2g099010 | 68.852 | 244 | 70 | 4 | 1 | 240 | 1 | 242 | 3.03e-114 | 327 |
| MS.gene46880.t1 | MTR_2g099010 | 61.702 | 188 | 67 | 3 | 57 | 240 | 31 | 217 | 1.71e-72 | 220 |
| MS.gene46880.t1 | MTR_2g073370 | 60.550 | 109 | 43 | 0 | 1 | 109 | 1 | 109 | 1.02e-42 | 146 |
| MS.gene46880.t1 | MTR_1g023260 | 34.799 | 273 | 133 | 8 | 1 | 240 | 1 | 261 | 1.04e-37 | 133 |
| MS.gene46880.t1 | MTR_3g117320 | 54.717 | 106 | 47 | 1 | 1 | 105 | 1 | 106 | 1.80e-35 | 126 |
| MS.gene46880.t1 | MTR_1g023260 | 57.407 | 108 | 39 | 2 | 1 | 104 | 1 | 105 | 1.89e-35 | 125 |
| MS.gene46880.t1 | MTR_4g071200 | 49.558 | 113 | 56 | 1 | 1 | 112 | 1 | 113 | 2.20e-35 | 125 |
| MS.gene46880.t1 | MTR_3g113070 | 52.830 | 106 | 48 | 1 | 1 | 104 | 1 | 106 | 1.44e-32 | 118 |
| MS.gene46880.t1 | MTR_5g021580 | 42.537 | 134 | 71 | 4 | 1 | 131 | 1 | 131 | 5.50e-25 | 97.8 |
| MS.gene46880.t1 | MTR_5g021580 | 42.537 | 134 | 71 | 4 | 1 | 131 | 1 | 131 | 5.95e-25 | 97.8 |
| MS.gene46880.t1 | MTR_7g018170 | 43.478 | 92 | 43 | 1 | 5 | 96 | 26 | 108 | 9.14e-19 | 84.7 |
| MS.gene46880.t1 | MTR_3g105710 | 43.750 | 96 | 45 | 1 | 5 | 100 | 6 | 92 | 1.87e-18 | 82.4 |
| MS.gene46880.t1 | MTR_1g013450 | 42.391 | 92 | 44 | 1 | 5 | 96 | 6 | 88 | 2.48e-18 | 82.4 |
| MS.gene46880.t1 | MTR_4g128930 | 39.130 | 92 | 47 | 1 | 5 | 96 | 22 | 104 | 1.20e-16 | 78.6 |
| MS.gene46880.t1 | MTR_7g108150 | 41.837 | 98 | 47 | 2 | 5 | 102 | 20 | 107 | 9.25e-16 | 75.9 |
| MS.gene46880.t1 | MTR_5g069480 | 35.417 | 96 | 53 | 1 | 1 | 96 | 1 | 87 | 4.67e-14 | 71.2 |
| MS.gene46880.t1 | MTR_5g069480 | 35.417 | 96 | 53 | 1 | 1 | 96 | 1 | 87 | 5.30e-14 | 70.1 |
| MS.gene46880.t1 | MTR_3g082630 | 38.542 | 96 | 49 | 2 | 1 | 96 | 1 | 86 | 6.52e-14 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46880.t1 | AT1G06040 | 62.500 | 248 | 85 | 4 | 1 | 240 | 1 | 248 | 8.69e-105 | 303 |
| MS.gene46880.t1 | AT2G31380 | 59.836 | 244 | 88 | 7 | 1 | 240 | 1 | 238 | 3.08e-92 | 271 |
| MS.gene46880.t1 | AT1G06040 | 66.071 | 168 | 51 | 3 | 1 | 162 | 1 | 168 | 2.66e-70 | 213 |
| MS.gene46880.t1 | AT1G78600 | 56.800 | 125 | 52 | 1 | 1 | 125 | 1 | 123 | 5.56e-42 | 145 |
| MS.gene46880.t1 | AT1G78600 | 56.800 | 125 | 52 | 1 | 1 | 125 | 1 | 123 | 1.19e-41 | 144 |
| MS.gene46880.t1 | AT4G10240 | 47.619 | 147 | 64 | 4 | 1 | 141 | 1 | 140 | 2.37e-36 | 126 |
| MS.gene46880.t1 | AT1G75540 | 56.522 | 115 | 47 | 2 | 1 | 112 | 1 | 115 | 5.46e-36 | 130 |
| MS.gene46880.t1 | AT4G39070 | 45.890 | 146 | 76 | 2 | 1 | 145 | 1 | 144 | 8.20e-34 | 122 |
| MS.gene46880.t1 | AT2G21320 | 50.000 | 104 | 49 | 2 | 1 | 104 | 1 | 101 | 4.25e-25 | 97.8 |
| MS.gene46880.t1 | AT4G38960 | 42.424 | 132 | 68 | 3 | 1 | 127 | 1 | 129 | 6.36e-25 | 97.4 |
| MS.gene46880.t1 | AT4G38960 | 42.424 | 132 | 68 | 3 | 1 | 127 | 1 | 129 | 6.36e-25 | 97.4 |
| MS.gene46880.t1 | AT5G15850 | 33.143 | 175 | 90 | 4 | 5 | 163 | 12 | 175 | 8.05e-20 | 87.4 |
| MS.gene46880.t1 | AT2G24790 | 43.478 | 92 | 43 | 1 | 5 | 96 | 8 | 90 | 1.20e-18 | 82.0 |
| MS.gene46880.t1 | AT2G24790 | 43.478 | 92 | 43 | 1 | 5 | 96 | 8 | 90 | 1.31e-18 | 83.2 |
| MS.gene46880.t1 | AT3G02380 | 43.478 | 92 | 43 | 1 | 5 | 96 | 16 | 98 | 1.55e-17 | 80.9 |
| MS.gene46880.t1 | AT5G15840 | 35.200 | 125 | 72 | 1 | 5 | 129 | 20 | 135 | 2.35e-17 | 79.3 |
| MS.gene46880.t1 | AT5G15840 | 35.200 | 125 | 72 | 1 | 5 | 129 | 20 | 135 | 2.40e-17 | 80.5 |
| MS.gene46880.t1 | AT4G38960 | 32.000 | 175 | 68 | 4 | 1 | 127 | 1 | 172 | 5.61e-17 | 77.4 |
| MS.gene46880.t1 | AT5G24930 | 41.667 | 96 | 47 | 1 | 5 | 100 | 6 | 92 | 7.75e-17 | 79.0 |
| MS.gene46880.t1 | AT2G47890 | 42.353 | 85 | 40 | 1 | 5 | 89 | 13 | 88 | 2.19e-14 | 71.6 |
| MS.gene46880.t1 | AT2G47890 | 42.353 | 85 | 40 | 1 | 5 | 89 | 13 | 88 | 2.23e-14 | 71.6 |
| MS.gene46880.t1 | AT2G47890 | 42.353 | 85 | 40 | 1 | 5 | 89 | 13 | 88 | 4.23e-14 | 69.7 |
| MS.gene46880.t1 | AT1G28050 | 34.653 | 101 | 57 | 1 | 2 | 102 | 6 | 97 | 3.88e-13 | 68.6 |
| MS.gene46880.t1 | AT1G68190 | 34.375 | 96 | 52 | 2 | 1 | 96 | 39 | 123 | 7.23e-13 | 67.8 |
| MS.gene46880.t1 | AT1G68190 | 34.375 | 96 | 52 | 2 | 1 | 96 | 10 | 94 | 8.09e-13 | 67.4 |
| MS.gene46880.t1 | AT1G68190 | 34.375 | 96 | 52 | 2 | 1 | 96 | 10 | 94 | 8.09e-13 | 67.4 |
| MS.gene46880.t1 | AT2G33500 | 34.000 | 100 | 57 | 1 | 3 | 102 | 10 | 100 | 1.20e-12 | 67.0 |
| MS.gene46880.t1 | AT2G33500 | 34.000 | 100 | 57 | 1 | 3 | 102 | 10 | 100 | 1.24e-12 | 67.0 |
| MS.gene46880.t1 | AT3G07650 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 1.39e-12 | 66.6 |
| MS.gene46880.t1 | AT3G07650 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 1.39e-12 | 66.6 |
| MS.gene46880.t1 | AT3G07650 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 1.39e-12 | 66.6 |
| MS.gene46880.t1 | AT3G07650 | 37.647 | 85 | 44 | 1 | 1 | 85 | 1 | 76 | 1.39e-12 | 66.6 |
| MS.gene46880.t1 | AT5G48250 | 32.653 | 98 | 55 | 2 | 1 | 96 | 1 | 89 | 1.95e-11 | 63.5 |
| MS.gene46880.t1 | AT5G57660 | 33.333 | 93 | 49 | 2 | 4 | 96 | 21 | 100 | 2.65e-11 | 62.8 |
Find 51 sgRNAs with CRISPR-Local
Find 142 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGTAGCTGGTAGTCTTTC+TGG | 0.109250 | 4.3:+36958049 | MS.gene46880:CDS |
| TTGGGCTGTTGATGATTTCT+TGG | 0.216145 | 4.3:+36958231 | MS.gene46880:CDS |
| GATGATTTCTTGGAATTAAC+TGG | 0.278064 | 4.3:+36958241 | MS.gene46880:CDS |
| CAGAAGCAATCCATGGAGTT+TGG | 0.289917 | 4.3:+36958847 | MS.gene46880:intron |
| ACTTGGCAGATATCACATTT+AGG | 0.310599 | 4.3:-36957058 | None:intergenic |
| GTAAGACATATAAGATTTAG+AGG | 0.311347 | 4.3:-36958992 | None:intergenic |
| ACACTGCCAGCATGCATTAC+TGG | 0.340744 | 4.3:-36958955 | None:intergenic |
| TACCGGTATCCGTGTGGCTT+TGG | 0.344898 | 4.3:+36958093 | MS.gene46880:CDS |
| ACGGGAACTTGTTGCGTGTC+TGG | 0.356267 | 4.3:-36958166 | None:intergenic |
| TAAAGTTGTCTTACCTTGTC+TGG | 0.367338 | 4.3:-36958274 | None:intergenic |
| TGCCTAGTTTCGCATCCTCT+TGG | 0.378192 | 4.3:+36958212 | MS.gene46880:CDS |
| GCCTAGTTTCGCATCCTCTT+GGG | 0.385410 | 4.3:+36958213 | MS.gene46880:CDS |
| AGACTACCAGCTACATGAAT+TGG | 0.402532 | 4.3:-36958043 | None:intergenic |
| CTAAACCTTCCTGAGGAAAC+TGG | 0.421815 | 4.3:-36958909 | None:intergenic |
| TAAGATTTAGAGGCTTTGTA+AGG | 0.437114 | 4.3:-36958982 | None:intergenic |
| CGATGATGATGAGCACTTCA+TGG | 0.441777 | 4.3:+36959047 | MS.gene46880:CDS |
| CATGTGCTTTAGCCGAGATC+TGG | 0.447542 | 4.3:-36959072 | None:intergenic |
| TGGAGTTTGGAGAGCTTGAA+TGG | 0.451045 | 4.3:+36958860 | MS.gene46880:CDS |
| TGTTGCGTGTCTGGATTAGA+TGG | 0.466529 | 4.3:-36958157 | None:intergenic |
| AGCCAAAGCCACACGGATAC+CGG | 0.489165 | 4.3:-36958095 | None:intergenic |
| GCACAACAAATCACCGTAGC+AGG | 0.495596 | 4.3:-36956929 | None:intergenic |
| CTGGATTAGATGGTTCAACT+TGG | 0.497438 | 4.3:-36958147 | None:intergenic |
| TTTCAATGACCAGTTTCCTC+AGG | 0.500064 | 4.3:+36958900 | MS.gene46880:CDS |
| CTGAGGAGGAGAAACTTTGA+CGG | 0.504586 | 4.3:-36958185 | None:intergenic |
| CACTTCATGGTGCCAGATCT+CGG | 0.507917 | 4.3:+36959060 | MS.gene46880:CDS |
| TACCGGTAGCAAGGAAGCGC+TGG | 0.512715 | 4.3:-36958078 | None:intergenic |
| CTTGAATGGCTATCGGATGC+AGG | 0.516958 | 4.3:+36958874 | MS.gene46880:CDS |
| TCAACACAAAATATGAAAGC+TGG | 0.522233 | 4.3:-36957986 | None:intergenic |
| GCCCAAGAGGATGCGAAACT+AGG | 0.529539 | 4.3:-36958214 | None:intergenic |
| TCATGTCGGACTTCAATCCT+AGG | 0.531676 | 4.3:-36959021 | None:intergenic |
| AGACCGAGCACTGTTCTGTA+AGG | 0.533969 | 4.3:+36958009 | MS.gene46880:CDS |
| AGCTTGCTAGCAAGCATCAA+AGG | 0.550543 | 4.3:+36957005 | MS.gene46880:CDS |
| TTCAAGCTCTCCAAACTCCA+TGG | 0.552963 | 4.3:-36958857 | None:intergenic |
| CACCAGCGCTTCCTTGCTAC+CGG | 0.553385 | 4.3:+36958076 | MS.gene46880:CDS |
| TGGAGAGCTTGAATGGCTAT+CGG | 0.557707 | 4.3:+36958867 | MS.gene46880:CDS |
| AAACTAGGCACTTGCTGAGG+AGG | 0.565089 | 4.3:-36958199 | None:intergenic |
| CAACTTCCAGTAATGCATGC+TGG | 0.570734 | 4.3:+36958949 | MS.gene46880:CDS |
| TGAGGAGGAGAAACTTTGAC+GGG | 0.575513 | 4.3:-36958184 | None:intergenic |
| AATGACCAGTTTCCTCAGGA+AGG | 0.575639 | 4.3:+36958904 | MS.gene46880:CDS |
| CATCATCATCGTCTTCATGT+CGG | 0.589449 | 4.3:-36959035 | None:intergenic |
| CGGTAGCAAGGAAGCGCTGG+TGG | 0.597801 | 4.3:-36958075 | None:intergenic |
| GAAATCATCAACAGCCCAAG+AGG | 0.601713 | 4.3:-36958227 | None:intergenic |
| GATGAACCAATTCATGTAGC+TGG | 0.610215 | 4.3:+36958037 | MS.gene46880:CDS |
| TGGCTTTGATTCACCAGACA+AGG | 0.610663 | 4.3:+36958261 | MS.gene46880:CDS |
| GCATGCATTACTGGAAGTTG+CGG | 0.617995 | 4.3:-36958946 | None:intergenic |
| CCACACGGATACCGGTAGCA+AGG | 0.621121 | 4.3:-36958087 | None:intergenic |
| AACTAGAAGCCAAAGCCACA+CGG | 0.621527 | 4.3:-36958102 | None:intergenic |
| AGTCCTTACAGAACAGTGCT+CGG | 0.631276 | 4.3:-36958012 | None:intergenic |
| CCTTGCTACCGGTATCCGTG+TGG | 0.645262 | 4.3:+36958087 | MS.gene46880:CDS |
| GCGAAACTAGGCACTTGCTG+AGG | 0.649769 | 4.3:-36958202 | None:intergenic |
| GCTGCAGCTAAACCTTCCTG+AGG | 0.726877 | 4.3:-36958916 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTAAAATAATATTTT+TGG | + | chr4.3:36957199-36957218 | MS.gene46880:intron | 0.0% |
| !! | AATTAAAAAAAAGACTTTAA+AGG | - | chr4.3:36957186-36957205 | None:intergenic | 10.0% |
| !! | CAAATATTAAAACAATATAA+AGG | - | chr4.3:36958804-36958823 | None:intergenic | 10.0% |
| !!! | AATAATATATTGAATTTTGT+AGG | + | chr4.3:36957243-36957262 | MS.gene46880:intron | 10.0% |
| !!! | CTTTATATTGTTTTAATATT+TGG | + | chr4.3:36958802-36958821 | MS.gene46880:intron | 10.0% |
| !! | AATAAATTATTATGAGAGTT+TGG | + | chr4.3:36957330-36957349 | MS.gene46880:intron | 15.0% |
| !! | ATATTAAAACAATATAAAGG+AGG | - | chr4.3:36958801-36958820 | None:intergenic | 15.0% |
| !! | CTTCTTATTCAAAATAAATA+GGG | - | chr4.3:36957714-36957733 | None:intergenic | 15.0% |
| !! | TACTATTAACATAATCATAA+AGG | - | chr4.3:36958762-36958781 | None:intergenic | 15.0% |
| !! | ATGTGCAAAAAAAAATAACA+TGG | - | chr4.3:36957385-36957404 | None:intergenic | 20.0% |
| !! | GCTTCTTATTCAAAATAAAT+AGG | - | chr4.3:36957715-36957734 | None:intergenic | 20.0% |
| !! | TGTGCAAAAAAAAATAACAT+GGG | - | chr4.3:36957384-36957403 | None:intergenic | 20.0% |
| !!! | ATTTTGTAGGATTTAAGATT+AGG | + | chr4.3:36957256-36957275 | MS.gene46880:intron | 20.0% |
| !!! | TCTGTTTATATGAATTTTTG+AGG | + | chr4.3:36958675-36958694 | MS.gene46880:intron | 20.0% |
| !!! | TTTTGTAGGATTTAAGATTA+GGG | + | chr4.3:36957257-36957276 | MS.gene46880:intron | 20.0% |
| ! | AAAATCTTCATGAATCTACA+TGG | - | chr4.3:36957435-36957454 | None:intergenic | 25.0% |
| ! | AATCAATGTCTTGGAATAAA+TGG | + | chr4.3:36957567-36957586 | MS.gene46880:intron | 25.0% |
| ! | ATAGATAGAAATCAATGTCT+TGG | + | chr4.3:36957558-36957577 | MS.gene46880:intron | 25.0% |
| ! | ATCCTATAGTTATAAGATGA+AGG | - | chr4.3:36957963-36957982 | None:intergenic | 25.0% |
| ! | CATTATTTCATTAAACGAAC+TGG | - | chr4.3:36958603-36958622 | None:intergenic | 25.0% |
| ! | GTAAGACATATAAGATTTAG+AGG | - | chr4.3:36958995-36959014 | None:intergenic | 25.0% |
| ! | TCATATAAACAGAAACCAAA+CGG | - | chr4.3:36958668-36958687 | None:intergenic | 25.0% |
| ! | TGAGAGATTATGATTTATGA+TGG | + | chr4.3:36958352-36958371 | MS.gene46880:intron | 25.0% |
| !! | AGATTATGATTTATGATGGA+GGG | + | chr4.3:36958356-36958375 | MS.gene46880:intron | 25.0% |
| !!! | AAGACATTGATTTCTATCTA+TGG | - | chr4.3:36957559-36957578 | None:intergenic | 25.0% |
| !!! | ATTTTGAATAAGAAGCATCT+AGG | + | chr4.3:36957719-36957738 | MS.gene46880:intron | 25.0% |
| AAAATTGCAATATTCGGATC+GGG | - | chr4.3:36957852-36957871 | None:intergenic | 30.0% | |
| AAATGCTAAATCTGATGTAC+TGG | - | chr4.3:36957762-36957781 | None:intergenic | 30.0% | |
| AATGCTAAATCTGATGTACT+GGG | - | chr4.3:36957761-36957780 | None:intergenic | 30.0% | |
| AGCAAAAACAAAACCATACT+TGG | - | chr4.3:36957078-36957097 | None:intergenic | 30.0% | |
| ATAACTGTCTTTGATTGGAT+TGG | + | chr4.3:36957503-36957522 | MS.gene46880:intron | 30.0% | |
| ATATGTCTTACAAAAAGCCT+AGG | + | chr4.3:36959004-36959023 | MS.gene46880:CDS | 30.0% | |
| ATGCTATAACTGTCTTTGAT+TGG | + | chr4.3:36957498-36957517 | MS.gene46880:intron | 30.0% | |
| GAAAATTGCAATATTCGGAT+CGG | - | chr4.3:36957853-36957872 | None:intergenic | 30.0% | |
| GAGATTATGATTTATGATGG+AGG | + | chr4.3:36958355-36958374 | MS.gene46880:intron | 30.0% | |
| GATGATTTCTTGGAATTAAC+TGG | + | chr4.3:36958241-36958260 | MS.gene46880:CDS | 30.0% | |
| TCAACACAAAATATGAAAGC+TGG | - | chr4.3:36957989-36958008 | None:intergenic | 30.0% | |
| ! | TAAGATTTAGAGGCTTTGTA+AGG | - | chr4.3:36958985-36959004 | None:intergenic | 30.0% |
| ! | TGTTGATAAATGATCTGTGA+AGG | + | chr4.3:36958451-36958470 | MS.gene46880:intron | 30.0% |
| ! | TTGCTTCTGAAAAGAAAGAA+AGG | - | chr4.3:36958836-36958855 | None:intergenic | 30.0% |
| ! | TTTTGAATTGTGTTTCGAAC+TGG | + | chr4.3:36957880-36957899 | MS.gene46880:intron | 30.0% |
| !! | ACACTTTTGATCGATTCTTT+AGG | - | chr4.3:36957684-36957703 | None:intergenic | 30.0% |
| !!! | ATGGATGATTTTACTGACTT+TGG | + | chr4.3:36957937-36957956 | MS.gene46880:intron | 30.0% |
| AATGTGATATCTGCCAAGTA+TGG | + | chr4.3:36957062-36957081 | MS.gene46880:intron | 35.0% | |
| ACTTGGCAGATATCACATTT+AGG | - | chr4.3:36957061-36957080 | None:intergenic | 35.0% | |
| CCGGTGAAAATTGCAATATT+CGG | - | chr4.3:36957858-36957877 | None:intergenic | 35.0% | |
| CGAAACACAATTCAAAATCC+CGG | - | chr4.3:36957877-36957896 | None:intergenic | 35.0% | |
| GGCCTTCATCTTATAACTAT+AGG | + | chr4.3:36957958-36957977 | MS.gene46880:intron | 35.0% | |
| TAAAGTTGTCTTACCTTGTC+TGG | - | chr4.3:36958277-36958296 | None:intergenic | 35.0% | |
| ! | CCGAATATTGCAATTTTCAC+CGG | + | chr4.3:36957855-36957874 | MS.gene46880:intron | 35.0% |
| ! | CGAATATTGCAATTTTCACC+GGG | + | chr4.3:36957856-36957875 | MS.gene46880:intron | 35.0% |
| ! | GTTGAAGTATTTGCTGAACA+TGG | + | chr4.3:36957918-36957937 | MS.gene46880:intron | 35.0% |
| ! | TTCTTTTCAGAAGCAATCCA+TGG | + | chr4.3:36958840-36958859 | MS.gene46880:intron | 35.0% |
| !! | TTGGCTTTTCTCATTGTCTT+TGG | - | chr4.3:36958131-36958150 | None:intergenic | 35.0% |
| AACCATATTTGCACAGGCAA+TGG | + | chr4.3:36958716-36958735 | MS.gene46880:intron | 40.0% | |
| ACTTCGAACCATATTTGCAC+AGG | + | chr4.3:36958710-36958729 | MS.gene46880:intron | 40.0% | |
| AGACTACCAGCTACATGAAT+TGG | - | chr4.3:36958046-36958065 | None:intergenic | 40.0% | |
| ATACCACTAGACTAACCCTT+AGG | + | chr4.3:36957642-36957661 | MS.gene46880:intron | 40.0% | |
| ATCTGTGAAGGAAACCAACT+TGG | + | chr4.3:36958463-36958482 | MS.gene46880:intron | 40.0% | |
| CATCATCATCGTCTTCATGT+CGG | - | chr4.3:36959038-36959057 | None:intergenic | 40.0% | |
| CCAAACTAACCCACCAAAAT+GGG | - | chr4.3:36958563-36958582 | None:intergenic | 40.0% | |
| GATGAACCAATTCATGTAGC+TGG | + | chr4.3:36958037-36958056 | MS.gene46880:CDS | 40.0% | |
| GATGATGTTGTGTTTGTAGC+AGG | + | chr4.3:36957589-36957608 | MS.gene46880:intron | 40.0% | |
| TACCACTAGACTAACCCTTA+GGG | + | chr4.3:36957643-36957662 | MS.gene46880:intron | 40.0% | |
| TACCATTGCCTGTGCAAATA+TGG | - | chr4.3:36958721-36958740 | None:intergenic | 40.0% | |
| TATTTGCACAGGCAATGGTA+AGG | + | chr4.3:36958721-36958740 | MS.gene46880:intron | 40.0% | |
| TCTGTGAAGGAAACCAACTT+GGG | + | chr4.3:36958464-36958483 | MS.gene46880:intron | 40.0% | |
| TTTCAATGACCAGTTTCCTC+AGG | + | chr4.3:36958900-36958919 | MS.gene46880:CDS | 40.0% | |
| ! | CTGGATTAGATGGTTCAACT+TGG | - | chr4.3:36958150-36958169 | None:intergenic | 40.0% |
| !! | GATTCTCTAAAGCCATTGCA+CGG | - | chr4.3:36957830-36957849 | None:intergenic | 40.0% |
| !! | TAAGGGTTAGTCTAGTGGTA+TGG | - | chr4.3:36957643-36957662 | None:intergenic | 40.0% |
| !! | TTGGGCTGTTGATGATTTCT+TGG | + | chr4.3:36958231-36958250 | MS.gene46880:CDS | 40.0% |
| AAAGCCATTGCACGGTGTAA+CGG | - | chr4.3:36957822-36957841 | None:intergenic | 45.0% | |
| AACTAGAAGCCAAAGCCACA+CGG | - | chr4.3:36958105-36958124 | None:intergenic | 45.0% | |
| AATGACCAGTTTCCTCAGGA+AGG | + | chr4.3:36958904-36958923 | MS.gene46880:CDS | 45.0% | |
| AGTCCTTACAGAACAGTGCT+CGG | - | chr4.3:36958015-36958034 | None:intergenic | 45.0% | |
| ATCGAACATGTGACCTTGAG+AGG | - | chr4.3:36958529-36958548 | None:intergenic | 45.0% | |
| ATGTCCTATTCGTGCCCTAA+GGG | - | chr4.3:36957660-36957679 | None:intergenic | 45.0% | |
| CAACTTCCAGTAATGCATGC+TGG | + | chr4.3:36958949-36958968 | MS.gene46880:CDS | 45.0% | |
| CAGAAGCAATCCATGGAGTT+TGG | + | chr4.3:36958847-36958866 | MS.gene46880:intron | 45.0% | |
| CAGGAATCGAACCCTTTCTT+CGG | + | chr4.3:36957608-36957627 | MS.gene46880:intron | 45.0% | |
| CATGTAGCTGGTAGTCTTTC+TGG | + | chr4.3:36958049-36958068 | MS.gene46880:CDS | 45.0% | |
| CTAAACCTTCCTGAGGAAAC+TGG | - | chr4.3:36958912-36958931 | None:intergenic | 45.0% | |
| CTGAGGAGGAGAAACTTTGA+CGG | - | chr4.3:36958188-36958207 | None:intergenic | 45.0% | |
| GAAATCATCAACAGCCCAAG+AGG | - | chr4.3:36958230-36958249 | None:intergenic | 45.0% | |
| GCATGCATTACTGGAAGTTG+CGG | - | chr4.3:36958949-36958968 | None:intergenic | 45.0% | |
| GCCAAACTAACCCACCAAAA+TGG | - | chr4.3:36958564-36958583 | None:intergenic | 45.0% | |
| GTGTGAAAAAGCTCCTGCTA+CGG | + | chr4.3:36956916-36956935 | MS.gene46880:CDS | 45.0% | |
| TAACCCACCAAAATGGGTAC+CGG | - | chr4.3:36958557-36958576 | None:intergenic | 45.0% | |
| TACACACTAACTCTGCCGTT+TGG | + | chr4.3:36958650-36958669 | MS.gene46880:intron | 45.0% | |
| TCATGTCGGACTTCAATCCT+AGG | - | chr4.3:36959024-36959043 | None:intergenic | 45.0% | |
| TGAAGGAAACCAACTTGGGT+TGG | + | chr4.3:36958468-36958487 | MS.gene46880:intron | 45.0% | |
| TGAGGAGGAGAAACTTTGAC+GGG | - | chr4.3:36958187-36958206 | None:intergenic | 45.0% | |
| TGGAGAGCTTGAATGGCTAT+CGG | + | chr4.3:36958867-36958886 | MS.gene46880:CDS | 45.0% | |
| TGGAGTTTGGAGAGCTTGAA+TGG | + | chr4.3:36958860-36958879 | MS.gene46880:CDS | 45.0% | |
| TTCAAGCTCTCCAAACTCCA+TGG | - | chr4.3:36958860-36958879 | None:intergenic | 45.0% | |
| ! | CGATGATGATGAGCACTTCA+TGG | + | chr4.3:36959047-36959066 | MS.gene46880:CDS | 45.0% |
| ! | TGTTGCGTGTCTGGATTAGA+TGG | - | chr4.3:36958160-36958179 | None:intergenic | 45.0% |
| !! | AGCTTGCTAGCAAGCATCAA+AGG | + | chr4.3:36957005-36957024 | MS.gene46880:CDS | 45.0% |
| !! | GGGTTAGTTTGGCTCTATGA+AGG | + | chr4.3:36958571-36958590 | MS.gene46880:intron | 45.0% |
| !! | TGGCTTTGATTCACCAGACA+AGG | + | chr4.3:36958261-36958280 | MS.gene46880:CDS | 45.0% |
| !!! | CCCATTTTGGTGGGTTAGTT+TGG | + | chr4.3:36958560-36958579 | MS.gene46880:intron | 45.0% |
| AACCCACCAAAATGGGTACC+GGG | - | chr4.3:36958556-36958575 | None:intergenic | 50.0% | |
| AAGCCATTGCACGGTGTAAC+GGG | - | chr4.3:36957821-36957840 | None:intergenic | 50.0% | |
| ACACTGCCAGCATGCATTAC+TGG | - | chr4.3:36958958-36958977 | None:intergenic | 50.0% | |
| ACCACAAAGCCAACCCAAGT+TGG | - | chr4.3:36958480-36958499 | None:intergenic | 50.0% | |
| CATGTCCTATTCGTGCCCTA+AGG | - | chr4.3:36957661-36957680 | None:intergenic | 50.0% | |
| CTAACCCTTAGGGCACGAAT+AGG | + | chr4.3:36957653-36957672 | MS.gene46880:intron | 50.0% | |
| CTTGAATGGCTATCGGATGC+AGG | + | chr4.3:36958874-36958893 | MS.gene46880:CDS | 50.0% | |
| GCACAACAAATCACCGTAGC+AGG | - | chr4.3:36956932-36956951 | None:intergenic | 50.0% | |
| GCCTAGTTTCGCATCCTCTT+GGG | + | chr4.3:36958213-36958232 | MS.gene46880:CDS | 50.0% | |
| GGACTGAGACACCGAAGAAA+GGG | - | chr4.3:36957622-36957641 | None:intergenic | 50.0% | |
| GTCACATGTTCGATTCTCCC+CGG | + | chr4.3:36958535-36958554 | MS.gene46880:intron | 50.0% | |
| TGCCTAGTTTCGCATCCTCT+TGG | + | chr4.3:36958212-36958231 | MS.gene46880:CDS | 50.0% | |
| TGGACTGAGACACCGAAGAA+AGG | - | chr4.3:36957623-36957642 | None:intergenic | 50.0% | |
| ! | AAACTAGGCACTTGCTGAGG+AGG | - | chr4.3:36958202-36958221 | None:intergenic | 50.0% |
| ! | AGACCGAGCACTGTTCTGTA+AGG | + | chr4.3:36958009-36958028 | MS.gene46880:CDS | 50.0% |
| ! | ATTCTCCCCGGTACCCATTT+TGG | + | chr4.3:36958547-36958566 | MS.gene46880:intron | 50.0% |
| ! | CACTTCATGGTGCCAGATCT+CGG | + | chr4.3:36959060-36959079 | MS.gene46880:CDS | 50.0% |
| !! | ACCAACTTGGGTTGGCTTTG+TGG | + | chr4.3:36958476-36958495 | MS.gene46880:intron | 50.0% |
| !! | TGCCCTAAGGGTTAGTCTAG+TGG | - | chr4.3:36957648-36957667 | None:intergenic | 50.0% |
| !! | TGGCTTTGTGGTGTTGGCTT+GGG | + | chr4.3:36958488-36958507 | MS.gene46880:intron | 50.0% |
| !! | TTGGCTTTGTGGTGTTGGCT+TGG | + | chr4.3:36958487-36958506 | MS.gene46880:intron | 50.0% |
| !! | TTGGGTTGGCTTTGTGGTGT+TGG | + | chr4.3:36958482-36958501 | MS.gene46880:intron | 50.0% |
| AGCCAAAGCCACACGGATAC+CGG | - | chr4.3:36958098-36958117 | None:intergenic | 55.0% | |
| CAACCCGTTACACCGTGCAA+TGG | + | chr4.3:36957815-36957834 | MS.gene46880:intron | 55.0% | |
| CTTCGAGTGTGCTCCTCTCA+AGG | + | chr4.3:36958513-36958532 | MS.gene46880:intron | 55.0% | |
| GCCCAAGAGGATGCGAAACT+AGG | - | chr4.3:36958217-36958236 | None:intergenic | 55.0% | |
| GCTGCAGCTAAACCTTCCTG+AGG | - | chr4.3:36958919-36958938 | None:intergenic | 55.0% | |
| TACCGGTATCCGTGTGGCTT+TGG | + | chr4.3:36958093-36958112 | MS.gene46880:CDS | 55.0% | |
| ! | ACCCACCAAAATGGGTACCG+GGG | - | chr4.3:36958555-36958574 | None:intergenic | 55.0% |
| ! | CTTGAGAGGAGCACACTCGA+AGG | - | chr4.3:36958515-36958534 | None:intergenic | 55.0% |
| ! | GCGAAACTAGGCACTTGCTG+AGG | - | chr4.3:36958205-36958224 | None:intergenic | 55.0% |
| !! | ACGGGAACTTGTTGCGTGTC+TGG | - | chr4.3:36958169-36958188 | None:intergenic | 55.0% |
| !! | TCCCCGGTACCCATTTTGGT+GGG | + | chr4.3:36958551-36958570 | MS.gene46880:intron | 55.0% |
| !! | TTGCACGGTGTAACGGGTTG+TGG | - | chr4.3:36957815-36957834 | None:intergenic | 55.0% |
| CACCAGCGCTTCCTTGCTAC+CGG | + | chr4.3:36958076-36958095 | MS.gene46880:CDS | 60.0% | |
| CCACACGGATACCGGTAGCA+AGG | - | chr4.3:36958090-36958109 | None:intergenic | 60.0% | |
| CCTTGCTACCGGTATCCGTG+TGG | + | chr4.3:36958087-36958106 | MS.gene46880:CDS | 60.0% | |
| ! | CTCCCCGGTACCCATTTTGG+TGG | + | chr4.3:36958550-36958569 | MS.gene46880:intron | 60.0% |
| ! | TACCGGTAGCAAGGAAGCGC+TGG | - | chr4.3:36958081-36958100 | None:intergenic | 60.0% |
| !! | CGGTAGCAAGGAAGCGCTGG+TGG | - | chr4.3:36958078-36958097 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 36956896 | 36959086 | 36956896 | ID=MS.gene46880 |
| chr4.3 | mRNA | 36956896 | 36959086 | 36956896 | ID=MS.gene46880.t1;Parent=MS.gene46880 |
| chr4.3 | exon | 36956896 | 36957078 | 36956896 | ID=MS.gene46880.t1.exon1;Parent=MS.gene46880.t1 |
| chr4.3 | CDS | 36956896 | 36957078 | 36956896 | ID=cds.MS.gene46880.t1;Parent=MS.gene46880.t1 |
| chr4.3 | exon | 36957980 | 36958282 | 36957980 | ID=MS.gene46880.t1.exon2;Parent=MS.gene46880.t1 |
| chr4.3 | CDS | 36957980 | 36958282 | 36957980 | ID=cds.MS.gene46880.t1;Parent=MS.gene46880.t1 |
| chr4.3 | exon | 36958850 | 36959086 | 36958850 | ID=MS.gene46880.t1.exon3;Parent=MS.gene46880.t1 |
| chr4.3 | CDS | 36958850 | 36959086 | 36958850 | ID=cds.MS.gene46880.t1;Parent=MS.gene46880.t1 |
| Gene Sequence |
| Protein sequence |
