Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067922.t1 | XP_003628943.1 | 99.8 | 471 | 1 | 0 | 1 | 471 | 104 | 574 | 2.90E-256 | 894 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067922.t1 | Q38954 | 83.1 | 474 | 77 | 2 | 1 | 471 | 114 | 587 | 4.8e-215 | 748.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067922.t1 | Q8GTR3 | 99.8 | 471 | 1 | 0 | 1 | 471 | 104 | 574 | 2.1e-256 | 894.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049173 | MS.gene067922 | 0.811915 | 5.51E-51 | -1.69E-46 |
| MS.gene049217 | MS.gene067922 | 0.833435 | 5.34E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene067922 | 0.810422 | 1.16E-50 | -1.69E-46 |
| MS.gene049232 | MS.gene067922 | 0.847118 | 1.42E-59 | -1.69E-46 |
| MS.gene049285 | MS.gene067922 | 0.821751 | 3.42E-53 | -1.69E-46 |
| MS.gene049320 | MS.gene067922 | 0.830873 | 2.30E-55 | -1.69E-46 |
| MS.gene049356 | MS.gene067922 | 0.808023 | 3.80E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene067922 | 0.867343 | 1.47E-65 | -1.69E-46 |
| MS.gene049396 | MS.gene067922 | 0.845367 | 4.24E-59 | -1.69E-46 |
| MS.gene049609 | MS.gene067922 | 0.800821 | 1.20E-48 | -1.69E-46 |
| MS.gene049633 | MS.gene067922 | 0.822887 | 1.86E-53 | -1.69E-46 |
| MS.gene049805 | MS.gene067922 | 0.826457 | 2.68E-54 | -1.69E-46 |
| MS.gene050095 | MS.gene067922 | -0.811984 | 5.32E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene067922 | 0.809419 | 1.91E-50 | -1.69E-46 |
| MS.gene050165 | MS.gene067922 | 0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene050216 | MS.gene067922 | 0.83926 | 1.76E-57 | -1.69E-46 |
| MS.gene050323 | MS.gene067922 | 0.816646 | 4.97E-52 | -1.69E-46 |
| MS.gene050333 | MS.gene067922 | 0.8086 | 2.86E-50 | -1.69E-46 |
| MS.gene050499 | MS.gene067922 | 0.828203 | 1.02E-54 | -1.69E-46 |
| MS.gene050504 | MS.gene067922 | 0.820979 | 5.15E-53 | -1.69E-46 |
| MS.gene050518 | MS.gene067922 | 0.808129 | 3.60E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene067922 | 0.823477 | 1.36E-53 | -1.69E-46 |
| MS.gene050662 | MS.gene067922 | 0.836536 | 8.83E-57 | -1.69E-46 |
| MS.gene050675 | MS.gene067922 | 0.809587 | 1.76E-50 | -1.69E-46 |
| MS.gene050686 | MS.gene067922 | 0.831194 | 1.92E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene067922 | 0.837892 | 3.98E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene067922 | 0.828868 | 7.08E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene067922 | 0.830711 | 2.52E-55 | -1.69E-46 |
| MS.gene050986 | MS.gene067922 | 0.81461 | 1.41E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene067922 | 0.807856 | 4.12E-50 | -1.69E-46 |
| MS.gene051509 | MS.gene067922 | 0.867968 | 9.25E-66 | -1.69E-46 |
| MS.gene051551 | MS.gene067922 | 0.801815 | 7.54E-49 | -1.69E-46 |
| MS.gene051692 | MS.gene067922 | 0.871553 | 6.26E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene067922 | 0.83338 | 5.51E-56 | -1.69E-46 |
| MS.gene051858 | MS.gene067922 | 0.828982 | 6.64E-55 | -1.69E-46 |
| MS.gene051874 | MS.gene067922 | 0.842916 | 1.93E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene067922 | 0.808683 | 2.75E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene067922 | 0.822786 | 1.97E-53 | -1.69E-46 |
| MS.gene052484 | MS.gene067922 | 0.808604 | 2.85E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene067922 | 0.80707 | 6.05E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene067922 | 0.805673 | 1.19E-49 | -1.69E-46 |
| MS.gene052916 | MS.gene067922 | 0.812279 | 4.59E-51 | -1.69E-46 |
| MS.gene052966 | MS.gene067922 | 0.804073 | 2.57E-49 | -1.69E-46 |
| MS.gene053009 | MS.gene067922 | 0.811268 | 7.62E-51 | -1.69E-46 |
| MS.gene053018 | MS.gene067922 | 0.805087 | 1.58E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene067922 | 0.81898 | 1.48E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene067922 | 0.814448 | 1.53E-51 | -1.69E-46 |
| MS.gene053420 | MS.gene067922 | -0.801957 | 7.05E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene067922 | 0.865621 | 5.17E-65 | -1.69E-46 |
| MS.gene053505 | MS.gene067922 | 0.810964 | 8.87E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene067922 | 0.825569 | 4.36E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene067922 | 0.804766 | 1.84E-49 | -1.69E-46 |
| MS.gene053813 | MS.gene067922 | 0.843571 | 1.29E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene067922 | 0.800862 | 1.18E-48 | -1.69E-46 |
| MS.gene053912 | MS.gene067922 | 0.854763 | 9.91E-62 | -1.69E-46 |
| MS.gene053916 | MS.gene067922 | 0.845198 | 4.72E-59 | -1.69E-46 |
| MS.gene054003 | MS.gene067922 | 0.807347 | 5.29E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene067922 | 0.809676 | 1.68E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene067922 | 0.83865 | 2.53E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene067922 | 0.821136 | 4.74E-53 | -1.69E-46 |
| MS.gene05505 | MS.gene067922 | 0.830587 | 2.70E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene067922 | 0.803526 | 3.34E-49 | -1.69E-46 |
| MS.gene055362 | MS.gene067922 | 0.814689 | 1.36E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene067922 | 0.804021 | 2.64E-49 | -1.69E-46 |
| MS.gene055502 | MS.gene067922 | 0.817158 | 3.81E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene067922 | 0.809854 | 1.54E-50 | -1.69E-46 |
| MS.gene055647 | MS.gene067922 | 0.807046 | 6.12E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene067922 | 0.860766 | 1.64E-63 | -1.69E-46 |
| MS.gene05592 | MS.gene067922 | 0.835934 | 1.26E-56 | -1.69E-46 |
| MS.gene055941 | MS.gene067922 | 0.803391 | 3.56E-49 | -1.69E-46 |
| MS.gene056166 | MS.gene067922 | 0.802783 | 4.76E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene067922 | 0.833325 | 5.69E-56 | -1.69E-46 |
| MS.gene056422 | MS.gene067922 | 0.869493 | 2.97E-66 | -1.69E-46 |
| MS.gene056487 | MS.gene067922 | 0.826183 | 3.12E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene067922 | 0.833206 | 6.09E-56 | -1.69E-46 |
| MS.gene056510 | MS.gene067922 | 0.82105 | 4.96E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene067922 | 0.815657 | 8.26E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene067922 | 0.84771 | 9.73E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene067922 | 0.836484 | 9.11E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene067922 | 0.830822 | 2.36E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene067922 | 0.863808 | 1.91E-64 | -1.69E-46 |
| MS.gene057129 | MS.gene067922 | 0.819298 | 1.25E-52 | -1.69E-46 |
| MS.gene057285 | MS.gene067922 | 0.819343 | 1.22E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene067922 | 0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene067922 | 0.816293 | 5.96E-52 | -1.69E-46 |
| MS.gene057537 | MS.gene067922 | 0.819311 | 1.24E-52 | -1.69E-46 |
| MS.gene057734 | MS.gene067922 | 0.836246 | 1.05E-56 | -1.69E-46 |
| MS.gene057805 | MS.gene067922 | 0.809029 | 2.32E-50 | -1.69E-46 |
| MS.gene057856 | MS.gene067922 | 0.809757 | 1.62E-50 | -1.69E-46 |
| MS.gene057857 | MS.gene067922 | 0.806518 | 7.91E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene067922 | 0.863392 | 2.57E-64 | -1.69E-46 |
| MS.gene058419 | MS.gene067922 | 0.831382 | 1.72E-55 | -1.69E-46 |
| MS.gene058459 | MS.gene067922 | 0.874042 | 9.19E-68 | -1.69E-46 |
| MS.gene058588 | MS.gene067922 | 0.810703 | 1.01E-50 | -1.69E-46 |
| MS.gene058723 | MS.gene067922 | 0.800927 | 1.15E-48 | -1.69E-46 |
| MS.gene058773 | MS.gene067922 | 0.805609 | 1.23E-49 | -1.69E-46 |
| MS.gene058840 | MS.gene067922 | -0.823048 | 1.71E-53 | -1.69E-46 |
| MS.gene058903 | MS.gene067922 | 0.805601 | 1.23E-49 | -1.69E-46 |
| MS.gene058928 | MS.gene067922 | 0.827227 | 1.76E-54 | -1.69E-46 |
| MS.gene059022 | MS.gene067922 | 0.820484 | 6.69E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene067922 | 0.864454 | 1.20E-64 | -1.69E-46 |
| MS.gene059305 | MS.gene067922 | 0.837451 | 5.16E-57 | -1.69E-46 |
| MS.gene059367 | MS.gene067922 | 0.837763 | 4.29E-57 | -1.69E-46 |
| MS.gene059368 | MS.gene067922 | 0.830867 | 2.31E-55 | -1.69E-46 |
| MS.gene059455 | MS.gene067922 | 0.805069 | 1.59E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene067922 | 0.807127 | 5.88E-50 | -1.69E-46 |
| MS.gene059674 | MS.gene067922 | 0.835612 | 1.52E-56 | -1.69E-46 |
| MS.gene059677 | MS.gene067922 | 0.801896 | 7.25E-49 | -1.69E-46 |
| MS.gene059711 | MS.gene067922 | 0.839488 | 1.54E-57 | -1.69E-46 |
| MS.gene059718 | MS.gene067922 | 0.812961 | 3.26E-51 | -1.69E-46 |
| MS.gene059807 | MS.gene067922 | 0.818051 | 2.40E-52 | -1.69E-46 |
| MS.gene059865 | MS.gene067922 | 0.859241 | 4.74E-63 | -1.69E-46 |
| MS.gene05986 | MS.gene067922 | 0.810772 | 9.76E-51 | -1.69E-46 |
| MS.gene059902 | MS.gene067922 | 0.815352 | 9.66E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene067922 | 0.853415 | 2.43E-61 | -1.69E-46 |
| MS.gene060703 | MS.gene067922 | 0.802493 | 5.47E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene067922 | 0.835316 | 1.80E-56 | -1.69E-46 |
| MS.gene060778 | MS.gene067922 | 0.825734 | 3.99E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene067922 | 0.815905 | 7.27E-52 | -1.69E-46 |
| MS.gene060818 | MS.gene067922 | 0.875354 | 3.29E-68 | -1.69E-46 |
| MS.gene060837 | MS.gene067922 | 0.843874 | 1.07E-58 | -1.69E-46 |
| MS.gene06097 | MS.gene067922 | 0.834064 | 3.72E-56 | -1.69E-46 |
| MS.gene060981 | MS.gene067922 | 0.815009 | 1.15E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene067922 | 0.816863 | 4.44E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene067922 | 0.835267 | 1.85E-56 | -1.69E-46 |
| MS.gene061134 | MS.gene067922 | 0.864572 | 1.10E-64 | -1.69E-46 |
| MS.gene061200 | MS.gene067922 | 0.814821 | 1.27E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067922.t1 | MTR_8g069390 | 99.788 | 471 | 1 | 0 | 1 | 471 | 104 | 574 | 0.0 | 934 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene067922.t1 | AT3G26570 | 83.122 | 474 | 77 | 2 | 1 | 471 | 114 | 587 | 0.0 | 756 |
| MS.gene067922.t1 | AT3G26570 | 83.122 | 474 | 77 | 2 | 1 | 471 | 140 | 613 | 0.0 | 755 |
Find 116 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAGGGTTTGGCCTAGTTTA+TGG | 0.168453 | 8.3:-33684589 | MS.gene067922:CDS |
| GCTGCAGCTGCTGCTTGTCC+TGG | 0.170623 | 8.3:+33684060 | None:intergenic |
| CCTTTGTTTATGACATCTTT+AGG | 0.248421 | 8.3:-33686243 | MS.gene067922:CDS |
| GCACCAATTGCTGTATTTCT+TGG | 0.260924 | 8.3:-33684036 | MS.gene067922:CDS |
| GAGGTGCTGGAGCTGTATTT+TGG | 0.263063 | 8.3:-33684567 | MS.gene067922:CDS |
| ATGCAGTTTGCATCATATTA+TGG | 0.273189 | 8.3:-33684652 | MS.gene067922:intron |
| TGGAACCGTCGGGGCTTTCC+TGG | 0.279990 | 8.3:-33683938 | MS.gene067922:CDS |
| TCCGGTTGGTGCTACCTTAT+CGG | 0.280482 | 8.3:-33683341 | MS.gene067922:CDS |
| TGCTGCTGGTACTTGGTTAC+AGG | 0.284265 | 8.3:-33685929 | MS.gene067922:intron |
| GTTCTTGCTTGGGGTGGATT+TGG | 0.288654 | 8.3:-33683625 | MS.gene067922:CDS |
| AGCTTCTTCTCTGATATTAC+AGG | 0.298759 | 8.3:-33683832 | MS.gene067922:CDS |
| AAAACTAGGGCTACCGATAT+CGG | 0.301083 | 8.3:-33683473 | MS.gene067922:CDS |
| GGTGGATTTGGAATCGTTGC+AGG | 0.303853 | 8.3:-33683613 | MS.gene067922:CDS |
| CAGAGAAGAAGCTTATGTTT+TGG | 0.304120 | 8.3:+33683842 | None:intergenic |
| CACTTGCTGCTGCTGGTACT+TGG | 0.307974 | 8.3:-33685936 | MS.gene067922:CDS |
| TTCATGGGCGGTTACTATTC+CGG | 0.308155 | 8.3:-33683359 | MS.gene067922:CDS |
| CTGCAGCTGCTGCTTGTCCT+GGG | 0.310215 | 8.3:+33684061 | None:intergenic |
| GAAGATGTCCGAGTTGTTTA+CGG | 0.312285 | 8.3:+33683902 | None:intergenic |
| GCTGTATTTCTTGGCGTAAC+TGG | 0.314923 | 8.3:-33684027 | MS.gene067922:CDS |
| TCCGATTGATGTTCTTGCTT+GGG | 0.350128 | 8.3:-33683635 | MS.gene067922:CDS |
| GGCCTAGTTTATGGAGGTGC+TGG | 0.361505 | 8.3:-33684580 | MS.gene067922:CDS |
| TGAAGGAGATTTGTGCTTCA+TGG | 0.362113 | 8.3:-33683375 | MS.gene067922:CDS |
| ACAAATCTCCTTCACTGTTT+CGG | 0.366906 | 8.3:+33683384 | None:intergenic |
| CAAGTCAAATACTCCACATT+TGG | 0.370050 | 8.3:-33683875 | MS.gene067922:CDS |
| CTTTCTTCACTTGCTGCTGC+TGG | 0.370685 | 8.3:-33685943 | MS.gene067922:CDS |
| GTTCTGTTTGCTTCAAAACT+AGG | 0.373108 | 8.3:-33683487 | MS.gene067922:CDS |
| ACTCAACTTGAAATAGTTTA+CGG | 0.382692 | 8.3:-33683799 | MS.gene067922:CDS |
| TTCCGATTGATGTTCTTGCT+TGG | 0.384604 | 8.3:-33683636 | MS.gene067922:CDS |
| TACAGAGTTATAGCTACAAT+TGG | 0.393371 | 8.3:-33683574 | MS.gene067922:CDS |
| AATGCCTGGCTTAGAGCTAT+TGG | 0.394818 | 8.3:+33683967 | None:intergenic |
| ACACTAGTTGGTGCAGTAAT+GGG | 0.403375 | 8.3:-33683442 | MS.gene067922:CDS |
| GACATCTTTAGGACAAGGTT+TGG | 0.406475 | 8.3:-33686232 | MS.gene067922:CDS |
| CATTAGCTTGTGGAACCGTC+GGG | 0.412945 | 8.3:-33683948 | MS.gene067922:CDS |
| AGCCGAGTTTGCGGCTGCCT+CGG | 0.415177 | 8.3:-33683512 | MS.gene067922:CDS |
| TGTTTGGATTCTACATGGCT+TGG | 0.415735 | 8.3:-33686173 | MS.gene067922:CDS |
| ATTTCAAGTTGAGTACCCTT+TGG | 0.427540 | 8.3:+33683808 | None:intergenic |
| ATGGGAACTTCTGTTGGATC+TGG | 0.444826 | 8.3:-33686120 | MS.gene067922:CDS |
| AAGACAAAGATGTTATCATA+TGG | 0.454924 | 8.3:-33686204 | MS.gene067922:CDS |
| AAACTAGGGCTACCGATATC+GGG | 0.457285 | 8.3:-33683472 | MS.gene067922:CDS |
| ACGCCAAGAAATACAGCAAT+TGG | 0.457920 | 8.3:+33684033 | None:intergenic |
| GCATTAGCTTGTGGAACCGT+CGG | 0.458457 | 8.3:-33683949 | MS.gene067922:CDS |
| GTGGGAGCAATGGTAGGGTT+TGG | 0.458744 | 8.3:-33684601 | MS.gene067922:CDS |
| CACCGAGGCAGCCGCAAACT+CGG | 0.458951 | 8.3:+33683510 | None:intergenic |
| ACCGATAAGGTAGCACCAAC+CGG | 0.463631 | 8.3:+33683340 | None:intergenic |
| ATCTACTACACATTGTATAG+TGG | 0.467258 | 8.3:-33684620 | MS.gene067922:CDS |
| AACGATGTCTCCAACGCAAT+AGG | 0.473437 | 8.3:-33683718 | MS.gene067922:CDS |
| AGGATTTGCAGCCGAGTTTG+CGG | 0.475291 | 8.3:-33683521 | MS.gene067922:CDS |
| TACACTAGTTGGTGCAGTAA+TGG | 0.476930 | 8.3:-33683443 | MS.gene067922:CDS |
| GAAGGAGATTTGTGCTTCAT+GGG | 0.479920 | 8.3:-33683374 | MS.gene067922:CDS |
| ATTCTACAAGGCGCAGCAAA+AGG | 0.482474 | 8.3:-33683673 | MS.gene067922:CDS |
| GATCTGGTGCATTGTCACTT+AGG | 0.491977 | 8.3:-33686104 | MS.gene067922:CDS |
| CCCCAAGCAAGAACATCAAT+CGG | 0.492615 | 8.3:+33683634 | None:intergenic |
| GATACTGCTGCTCCCAATAG+TGG | 0.498114 | 8.3:+33684505 | None:intergenic |
| TCGGCTGCAAATCCTCTTGT+CGG | 0.500344 | 8.3:+33683529 | None:intergenic |
| TGTATAGTGGGAGCAATGGT+AGG | 0.500362 | 8.3:-33684607 | MS.gene067922:CDS |
| TTCTACATGGCTTGGAACAT+TGG | 0.501972 | 8.3:-33686165 | MS.gene067922:CDS |
| GTTGGTGCAGTAATGGGAGT+TGG | 0.502537 | 8.3:-33683436 | MS.gene067922:CDS |
| CTCTGATATTACAGGTCCAA+AGG | 0.503091 | 8.3:-33683824 | MS.gene067922:CDS |
| TTCTGTTTGCTTCAAAACTA+GGG | 0.505630 | 8.3:-33683486 | MS.gene067922:CDS |
| CTCCAACGCAATAGGTCCAT+TGG | 0.509756 | 8.3:-33683710 | MS.gene067922:CDS |
| AGTGTATGTGTCCCCGATAT+CGG | 0.513359 | 8.3:+33683460 | None:intergenic |
| TACGGATAGTTCTGTTGACC+AGG | 0.515812 | 8.3:+33683920 | None:intergenic |
| TGGGCGGTTACTATTCCGGT+TGG | 0.521858 | 8.3:-33683355 | MS.gene067922:CDS |
| CGTTGCAGGGCTAATGATGT+GGG | 0.524372 | 8.3:-33683599 | MS.gene067922:CDS |
| CGGTTCCACAAGCTAATGCC+TGG | 0.524860 | 8.3:+33683953 | None:intergenic |
| AATGCAATGGGAACTTCTGT+TGG | 0.531915 | 8.3:-33686126 | MS.gene067922:CDS |
| TTGTCTACAAATGCATTCGA+AGG | 0.534019 | 8.3:-33684477 | MS.gene067922:CDS |
| CTCCAGCACCTCCATAAACT+AGG | 0.535656 | 8.3:+33684578 | None:intergenic |
| CCACGTGTAAATCACCGATA+AGG | 0.535689 | 8.3:+33683327 | None:intergenic |
| CTAAGCCAGGCATTAGCTTG+TGG | 0.542312 | 8.3:-33683958 | MS.gene067922:CDS |
| AATGATGTTGCAAATGCAAT+GGG | 0.542803 | 8.3:-33686138 | MS.gene067922:CDS |
| AGTTTGCATCATATTATGGT+TGG | 0.546165 | 8.3:-33684648 | MS.gene067922:CDS |
| TGCATCATATTATGGTTGGC+CGG | 0.550011 | 8.3:-33684644 | MS.gene067922:CDS |
| CCGATTGATGTTCTTGCTTG+GGG | 0.552108 | 8.3:-33683634 | MS.gene067922:CDS |
| GTGGATTTGGAATCGTTGCA+GGG | 0.552937 | 8.3:-33683612 | MS.gene067922:CDS |
| TCGGGGACACATACACTAGT+TGG | 0.555114 | 8.3:-33683454 | MS.gene067922:CDS |
| CGAGTTTGCGGCTGCCTCGG+TGG | 0.555593 | 8.3:-33683509 | MS.gene067922:CDS |
| ATTGATGTTCTTGCTTGGGG+TGG | 0.555893 | 8.3:-33683631 | MS.gene067922:CDS |
| TCGTTGCAGGGCTAATGATG+TGG | 0.557121 | 8.3:-33683600 | MS.gene067922:CDS |
| TGTTTCATGTCATTTGCTCA+CGG | 0.557308 | 8.3:-33683745 | MS.gene067922:CDS |
| TCTGATATTACAGGTCCAAA+GGG | 0.566683 | 8.3:-33683823 | MS.gene067922:CDS |
| GGCCAATGGACCTATTGCGT+TGG | 0.567487 | 8.3:+33683708 | None:intergenic |
| GGGTTTGGCCTAGTTTATGG+AGG | 0.570594 | 8.3:-33684586 | MS.gene067922:CDS |
| TGTGACTAGTACAATGCAGA+AGG | 0.570955 | 8.3:-33686022 | MS.gene067922:CDS |
| TACAATTGGAAAGAAAATAA+CGG | 0.573343 | 8.3:-33683560 | MS.gene067922:CDS |
| TCTACTACACATTGTATAGT+GGG | 0.579166 | 8.3:-33684619 | MS.gene067922:CDS |
| TGTGTTGACAGCTGCAGTGT+TGG | 0.582448 | 8.3:-33686076 | MS.gene067922:CDS |
| CCTAAAGATGTCATAAACAA+AGG | 0.582464 | 8.3:+33686243 | None:intergenic |
| GTATAGTGGGAGCAATGGTA+GGG | 0.585259 | 8.3:-33684606 | MS.gene067922:CDS |
| CCTTATCGGTGATTTACACG+TGG | 0.586036 | 8.3:-33683327 | MS.gene067922:CDS |
| GCTAAGTGGGAAAGCAGCAA+AGG | 0.591804 | 8.3:+33683999 | None:intergenic |
| TAATGATGTTGCAAATGCAA+TGG | 0.596839 | 8.3:-33686139 | MS.gene067922:CDS |
| TATAACAATATGTATAGTAA+TGG | 0.596864 | 8.3:-33686280 | MS.gene067922:CDS |
| ATACAATGTGTAGTAGATAC+CGG | 0.597031 | 8.3:+33684625 | None:intergenic |
| ACATTGTATAGTGGGAGCAA+TGG | 0.597997 | 8.3:-33684611 | MS.gene067922:CDS |
| ATAGCTAACGCACCGGCCAA+TGG | 0.604194 | 8.3:+33683694 | None:intergenic |
| AGTTCCCATCAACAATGCCC+CGG | 0.605971 | 8.3:+33686047 | None:intergenic |
| AACGCAATAGGTCCATTGGC+CGG | 0.610227 | 8.3:-33683706 | MS.gene067922:CDS |
| TGGCAAGAGTGATTTCGTCA+TGG | 0.615368 | 8.3:-33684537 | MS.gene067922:CDS |
| TGTTAGATCCGAAACAGTGA+AGG | 0.620708 | 8.3:-33683392 | MS.gene067922:CDS |
| GGTGCGTTAGCTATTCTACA+AGG | 0.621378 | 8.3:-33683685 | MS.gene067922:CDS |
| AGAACTATCCGTAAACAACT+CGG | 0.621558 | 8.3:-33683910 | MS.gene067922:CDS |
| TGTCTACAAATGCATTCGAA+GGG | 0.623400 | 8.3:-33684476 | MS.gene067922:intron |
| ATGGGAGTTGGATTCGCGAG+AGG | 0.625208 | 8.3:-33683424 | MS.gene067922:CDS |
| TTTATGACATCTTTAGGACA+AGG | 0.625714 | 8.3:-33686237 | MS.gene067922:CDS |
| ACGGAACTTACACCGACAAG+AGG | 0.634990 | 8.3:-33683541 | MS.gene067922:CDS |
| GGAGATTTGTGCTTCATGGG+CGG | 0.643143 | 8.3:-33683371 | MS.gene067922:CDS |
| GTTGACCAGGAAAGCCCCGA+CGG | 0.645332 | 8.3:+33683933 | None:intergenic |
| AACTAGGGCTACCGATATCG+GGG | 0.646921 | 8.3:-33683471 | MS.gene067922:CDS |
| TTCATGTCATTTGCTCACGG+TGG | 0.649798 | 8.3:-33683742 | MS.gene067922:CDS |
| ATTAGCTTGTGGAACCGTCG+GGG | 0.654249 | 8.3:-33683947 | MS.gene067922:CDS |
| GTGACTAGTACAATGCAGAA+GGG | 0.662462 | 8.3:-33686021 | MS.gene067922:CDS |
| GTATACAGTGCAAGTAACCC+AGG | 0.669512 | 8.3:-33684078 | MS.gene067922:CDS |
| TTGTAGAATAGCTAACGCAC+CGG | 0.670355 | 8.3:+33683687 | None:intergenic |
| GTTGCAGGGCTAATGATGTG+GGG | 0.715224 | 8.3:-33683598 | MS.gene067922:CDS |
| TGAAGCAAACAGAACCACCG+AGG | 0.748210 | 8.3:+33683495 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATTCAATGAATTTAATT+AGG | - | chr8.3:33684923-33684942 | MS.gene067922:intron | 15.0% |
| !! | TATAACAATATGTATAGTAA+TGG | - | chr8.3:33683335-33683354 | MS.gene067922:CDS | 15.0% |
| !! | TTTCAGAGTAAATTAAAAAT+TGG | + | chr8.3:33684024-33684043 | None:intergenic | 15.0% |
| !!! | ATGTCATTATCTTTTATTTT+TGG | - | chr8.3:33684847-33684866 | MS.gene067922:intron | 15.0% |
| !! | AAAAGTAATTAGGTGTATTA+TGG | - | chr8.3:33683876-33683895 | MS.gene067922:CDS | 20.0% |
| !! | TACAATTGGAAAGAAAATAA+CGG | - | chr8.3:33686055-33686074 | MS.gene067922:CDS | 20.0% |
| !! | TCAAAACAATGATAATACAA+AGG | - | chr8.3:33683998-33684017 | MS.gene067922:CDS | 20.0% |
| !! | TTAATGCAACATTTATTTCA+TGG | - | chr8.3:33685170-33685189 | MS.gene067922:intron | 20.0% |
| !!! | AATCAAGTTGAAAATTTGAA+GGG | - | chr8.3:33683912-33683931 | MS.gene067922:CDS | 20.0% |
| !!! | GTATTGAATTTGTTAACAAT+TGG | - | chr8.3:33683807-33683826 | MS.gene067922:CDS | 20.0% |
| !!! | TAATCAAGTTGAAAATTTGA+AGG | - | chr8.3:33683911-33683930 | MS.gene067922:CDS | 20.0% |
| !!! | TATTTTTGGTCAAGAAAATA+AGG | - | chr8.3:33684861-33684880 | MS.gene067922:intron | 20.0% |
| ! | AAGACAAAGATGTTATCATA+TGG | - | chr8.3:33683411-33683430 | MS.gene067922:CDS | 25.0% |
| ! | ACTCAACTTGAAATAGTTTA+CGG | - | chr8.3:33685816-33685835 | MS.gene067922:intron | 25.0% |
| ! | AGTCATAAAAGAGATAACTT+TGG | + | chr8.3:33684691-33684710 | None:intergenic | 25.0% |
| ! | CACTTAGAAAATGTAAACTA+AGG | + | chr8.3:33684455-33684474 | None:intergenic | 25.0% |
| ! | TACAAATGACACATTTCTAA+TGG | + | chr8.3:33684417-33684436 | None:intergenic | 25.0% |
| ! | TACCATCTTAGAATTTCAAT+TGG | - | chr8.3:33684222-33684241 | MS.gene067922:intron | 25.0% |
| ! | TCAACAAGATCTTATATTCA+GGG | + | chr8.3:33683755-33683774 | None:intergenic | 25.0% |
| !! | ATCCAATTGAAATTCTAAGA+TGG | + | chr8.3:33684227-33684246 | None:intergenic | 25.0% |
| !! | TACTCTGAAAATTTGCAATT+TGG | - | chr8.3:33684034-33684053 | MS.gene067922:CDS | 25.0% |
| !!! | ATCAAGTTGAAAATTTGAAG+GGG | - | chr8.3:33683913-33683932 | MS.gene067922:CDS | 25.0% |
| !!! | CAATTTGGTTTTTGTGATAT+AGG | - | chr8.3:33684049-33684068 | MS.gene067922:CDS | 25.0% |
| !!! | TTAAAATGATGCTGTTGTTT+TGG | + | chr8.3:33684622-33684641 | None:intergenic | 25.0% |
| AAACTATTATGAACTGACAG+TGG | - | chr8.3:33685364-33685383 | MS.gene067922:intron | 30.0% | |
| AAAGTTTATCCAAAATCCGT+TGG | + | chr8.3:33684200-33684219 | None:intergenic | 30.0% | |
| AAGTTTACCATTTATGAGAG+AGG | - | chr8.3:33683841-33683860 | MS.gene067922:CDS | 30.0% | |
| AATGATGTTGCAAATGCAAT+GGG | - | chr8.3:33683477-33683496 | MS.gene067922:CDS | 30.0% | |
| AGTTTGCATCATATTATGGT+TGG | - | chr8.3:33684967-33684986 | MS.gene067922:intron | 30.0% | |
| ATACAATGTGTAGTAGATAC+CGG | + | chr8.3:33684993-33685012 | None:intergenic | 30.0% | |
| ATCTACTACACATTGTATAG+TGG | - | chr8.3:33684995-33685014 | MS.gene067922:intron | 30.0% | |
| ATGAATCTAGCATATCTGTT+TGG | + | chr8.3:33685479-33685498 | None:intergenic | 30.0% | |
| ATGATTTCACCACACATTAT+TGG | + | chr8.3:33685276-33685295 | None:intergenic | 30.0% | |
| ATGCAGTTTGCATCATATTA+TGG | - | chr8.3:33684963-33684982 | MS.gene067922:intron | 30.0% | |
| ATTGGAAAAATCTTGCTAAG+TGG | + | chr8.3:33685633-33685652 | None:intergenic | 30.0% | |
| CCTAAAGATGTCATAAACAA+AGG | + | chr8.3:33683375-33683394 | None:intergenic | 30.0% | |
| GATAGTACTAAATTGCGAAA+CGG | + | chr8.3:33683727-33683746 | None:intergenic | 30.0% | |
| GATATAGGAATCTAGTACTT+AGG | - | chr8.3:33684064-33684083 | MS.gene067922:CDS | 30.0% | |
| GTCAACAAGATCTTATATTC+AGG | + | chr8.3:33683756-33683775 | None:intergenic | 30.0% | |
| TAATGATGTTGCAAATGCAA+TGG | - | chr8.3:33683476-33683495 | MS.gene067922:CDS | 30.0% | |
| TACAGAGTTATAGCTACAAT+TGG | - | chr8.3:33686041-33686060 | MS.gene067922:CDS | 30.0% | |
| TCTACTACACATTGTATAGT+GGG | - | chr8.3:33684996-33685015 | MS.gene067922:intron | 30.0% | |
| TCTTAACAAAAACCTTGGTT+AGG | - | chr8.3:33684336-33684355 | MS.gene067922:intron | 30.0% | |
| TGATTTCACCACACATTATT+GGG | + | chr8.3:33685275-33685294 | None:intergenic | 30.0% | |
| TTCTGTTTGCTTCAAAACTA+GGG | - | chr8.3:33686129-33686148 | MS.gene067922:CDS | 30.0% | |
| TTGCTATAGTTGGAAAGTAA+AGG | - | chr8.3:33684585-33684604 | MS.gene067922:CDS | 30.0% | |
| TTGGAAAAATCTTGCTAAGT+GGG | + | chr8.3:33685632-33685651 | None:intergenic | 30.0% | |
| ! | AGAGAAGAAGCTTATGTTTT+GGG | + | chr8.3:33685775-33685794 | None:intergenic | 30.0% |
| ! | AGATCTTGTTGACTAAATCA+CGG | - | chr8.3:33683763-33683782 | MS.gene067922:CDS | 30.0% |
| ! | AGTTATCTCTTTTATGACTG+AGG | - | chr8.3:33684692-33684711 | MS.gene067922:intron | 30.0% |
| ! | CAGCTTTTTATTGCTATAGT+TGG | - | chr8.3:33684575-33684594 | MS.gene067922:CDS | 30.0% |
| ! | CCTTTGTTTATGACATCTTT+AGG | - | chr8.3:33683372-33683391 | MS.gene067922:CDS | 30.0% |
| ! | CTTGTTGCTAATGTTTTTCA+GGG | - | chr8.3:33683621-33683640 | MS.gene067922:CDS | 30.0% |
| ! | GAAATAGTTTACGGAGTTTT+CGG | - | chr8.3:33685825-33685844 | MS.gene067922:intron | 30.0% |
| ! | TATGCTGAAGTTTTCAAATG+AGG | - | chr8.3:33683975-33683994 | MS.gene067922:CDS | 30.0% |
| ! | TCATATGGAACACTTTTGTT+TGG | - | chr8.3:33683426-33683445 | MS.gene067922:CDS | 30.0% |
| ! | TCTTGTTGCTAATGTTTTTC+AGG | - | chr8.3:33683620-33683639 | MS.gene067922:CDS | 30.0% |
| ! | TGTTGGTTGCAAAAGTAATT+AGG | - | chr8.3:33683866-33683885 | MS.gene067922:CDS | 30.0% |
| !! | ACTTTTGTTTGGATTCTACA+TGG | - | chr8.3:33683437-33683456 | MS.gene067922:CDS | 30.0% |
| !! | ATGTGTCATTTGTATGACAT+TGG | - | chr8.3:33684423-33684442 | MS.gene067922:intron | 30.0% |
| !! | TCAAGTTGAAAATTTGAAGG+GGG | - | chr8.3:33683914-33683933 | MS.gene067922:CDS | 30.0% |
| !! | TGTGTCATTTGTATGACATT+GGG | - | chr8.3:33684424-33684443 | MS.gene067922:intron | 30.0% |
| !! | TTGTTGCTAATGTTTTTCAG+GGG | - | chr8.3:33683622-33683641 | MS.gene067922:CDS | 30.0% |
| !! | TTTATGACATCTTTAGGACA+AGG | - | chr8.3:33683378-33683397 | MS.gene067922:CDS | 30.0% |
| AAAACCTTGGTTAGGAACAT+AGG | - | chr8.3:33684344-33684363 | MS.gene067922:intron | 35.0% | |
| ACAAATCTCCTTCACTGTTT+CGG | + | chr8.3:33686234-33686253 | None:intergenic | 35.0% | |
| AGAACTATCCGTAAACAACT+CGG | - | chr8.3:33685705-33685724 | MS.gene067922:intron | 35.0% | |
| AGCTTCTTCTCTGATATTAC+AGG | - | chr8.3:33685783-33685802 | MS.gene067922:intron | 35.0% | |
| CAACAATCCTCTCTCATAAA+TGG | + | chr8.3:33683851-33683870 | None:intergenic | 35.0% | |
| CAAGTCAAATACTCCACATT+TGG | - | chr8.3:33685740-33685759 | MS.gene067922:intron | 35.0% | |
| CATTTATGAGAGAGGATTGT+TGG | - | chr8.3:33683849-33683868 | MS.gene067922:CDS | 35.0% | |
| CTAACACAACCTTACAAAAC+CGG | - | chr8.3:33684247-33684266 | MS.gene067922:intron | 35.0% | |
| GTCAAATTCGTCAAATGAAG+TGG | - | chr8.3:33685316-33685335 | MS.gene067922:intron | 35.0% | |
| GTGTCAGATATTAGTGTATG+CGG | - | chr8.3:33684472-33684491 | MS.gene067922:intron | 35.0% | |
| GTTCTGTTTGCTTCAAAACT+AGG | - | chr8.3:33686128-33686147 | MS.gene067922:CDS | 35.0% | |
| TCTGATATTACAGGTCCAAA+GGG | - | chr8.3:33685792-33685811 | MS.gene067922:intron | 35.0% | |
| TGTCTACAAATGCATTCGAA+GGG | - | chr8.3:33685139-33685158 | MS.gene067922:intron | 35.0% | |
| TTGTCTACAAATGCATTCGA+AGG | - | chr8.3:33685138-33685157 | MS.gene067922:intron | 35.0% | |
| ! | CAAGTTGAAAATTTGAAGGG+GGG | - | chr8.3:33683915-33683934 | MS.gene067922:CDS | 35.0% |
| ! | CAGAGAAGAAGCTTATGTTT+TGG | + | chr8.3:33685776-33685795 | None:intergenic | 35.0% |
| ! | GAGAAGAAGCTTATGTTTTG+GGG | + | chr8.3:33685774-33685793 | None:intergenic | 35.0% |
| ! | TCGAGTTTTCTGAGTTATTG+AGG | - | chr8.3:33684818-33684837 | MS.gene067922:intron | 35.0% |
| ! | TGTTTCATGTCATTTGCTCA+CGG | - | chr8.3:33685870-33685889 | MS.gene067922:intron | 35.0% |
| !! | AGAAGAAGCTTATGTTTTGG+GGG | + | chr8.3:33685773-33685792 | None:intergenic | 35.0% |
| !! | ATTTCAAGTTGAGTACCCTT+TGG | + | chr8.3:33685810-33685829 | None:intergenic | 35.0% |
| !! | GATAACTGCATGTTGTTTCA+AGG | + | chr8.3:33684800-33684819 | None:intergenic | 35.0% |
| !! | GTGTCATTTGTATGACATTG+GGG | - | chr8.3:33684425-33684444 | MS.gene067922:intron | 35.0% |
| !!! | AAGGATACTTTGCTTTTTGC+AGG | - | chr8.3:33683645-33683664 | MS.gene067922:CDS | 35.0% |
| !!! | AGGATACTTTGCTTTTTGCA+GGG | - | chr8.3:33683646-33683665 | MS.gene067922:CDS | 35.0% |
| !!! | CTGTTGTTTTGGAAACCTTT+TGG | + | chr8.3:33684611-33684630 | None:intergenic | 35.0% |
| !!! | TTCCTTGTTTTCTTCTGCTA+GGG | + | chr8.3:33684373-33684392 | None:intergenic | 35.0% |
| !!! | TTTCCTTGTTTTCTTCTGCT+AGG | + | chr8.3:33684374-33684393 | None:intergenic | 35.0% |
| AAAACTAGGGCTACCGATAT+CGG | - | chr8.3:33686142-33686161 | MS.gene067922:CDS | 40.0% | |
| AATGCAATGGGAACTTCTGT+TGG | - | chr8.3:33683489-33683508 | MS.gene067922:CDS | 40.0% | |
| ACGCCAAGAAATACAGCAAT+TGG | + | chr8.3:33685585-33685604 | None:intergenic | 40.0% | |
| ACTGTATACAAACTGCATGG+GGG | + | chr8.3:33685526-33685545 | None:intergenic | 40.0% | |
| ACTTAGGACCTGATAGTAGA+TGG | - | chr8.3:33684173-33684192 | MS.gene067922:intron | 40.0% | |
| ATTAGTGTATGCGGCTACAT+GGG | - | chr8.3:33684481-33684500 | MS.gene067922:CDS | 40.0% | |
| CACTGTATACAAACTGCATG+GGG | + | chr8.3:33685527-33685546 | None:intergenic | 40.0% | |
| CTCTGATATTACAGGTCCAA+AGG | - | chr8.3:33685791-33685810 | MS.gene067922:intron | 40.0% | |
| GAAGATGTCCGAGTTGTTTA+CGG | + | chr8.3:33685716-33685735 | None:intergenic | 40.0% | |
| GAAGGAGATTTGTGCTTCAT+GGG | - | chr8.3:33686241-33686260 | MS.gene067922:CDS | 40.0% | |
| GCACCAATTGCTGTATTTCT+TGG | - | chr8.3:33685579-33685598 | MS.gene067922:intron | 40.0% | |
| GCACTGTATACAAACTGCAT+GGG | + | chr8.3:33685528-33685547 | None:intergenic | 40.0% | |
| GGGACTCTTAACAAAAACCT+TGG | - | chr8.3:33684331-33684350 | MS.gene067922:intron | 40.0% | |
| GTAATAATCACCTCGTTAGC+CGG | + | chr8.3:33684269-33684288 | None:intergenic | 40.0% | |
| GTGACTAGTACAATGCAGAA+GGG | - | chr8.3:33683594-33683613 | MS.gene067922:CDS | 40.0% | |
| GTGTGTTAAGAGTCTCACAT+TGG | + | chr8.3:33684120-33684139 | None:intergenic | 40.0% | |
| GTTGGAAAGTAAAGGCCAAA+AGG | - | chr8.3:33684593-33684612 | MS.gene067922:CDS | 40.0% | |
| TATTAGTGTATGCGGCTACA+TGG | - | chr8.3:33684480-33684499 | MS.gene067922:CDS | 40.0% | |
| TCAGATCACCCAATAATGTG+TGG | - | chr8.3:33685264-33685283 | MS.gene067922:intron | 40.0% | |
| TCCGATTGATGTTCTTGCTT+GGG | - | chr8.3:33685980-33685999 | MS.gene067922:CDS | 40.0% | |
| TGAAGGAGATTTGTGCTTCA+TGG | - | chr8.3:33686240-33686259 | MS.gene067922:CDS | 40.0% | |
| TGCACTGTATACAAACTGCA+TGG | + | chr8.3:33685529-33685548 | None:intergenic | 40.0% | |
| TGCATCATATTATGGTTGGC+CGG | - | chr8.3:33684971-33684990 | MS.gene067922:intron | 40.0% | |
| TGTGACTAGTACAATGCAGA+AGG | - | chr8.3:33683593-33683612 | MS.gene067922:CDS | 40.0% | |
| TGTTAGATCCGAAACAGTGA+AGG | - | chr8.3:33686223-33686242 | MS.gene067922:CDS | 40.0% | |
| TGTTTGGATTCTACATGGCT+TGG | - | chr8.3:33683442-33683461 | MS.gene067922:CDS | 40.0% | |
| TTCCGATTGATGTTCTTGCT+TGG | - | chr8.3:33685979-33685998 | MS.gene067922:CDS | 40.0% | |
| TTGTAGAATAGCTAACGCAC+CGG | + | chr8.3:33685931-33685950 | None:intergenic | 40.0% | |
| ! | ACACTAGTTGGTGCAGTAAT+GGG | - | chr8.3:33686173-33686192 | MS.gene067922:CDS | 40.0% |
| ! | ACATTGTATAGTGGGAGCAA+TGG | - | chr8.3:33685004-33685023 | MS.gene067922:intron | 40.0% |
| ! | ATGGATTTTCTCGCCACTAT+TGG | - | chr8.3:33685097-33685116 | MS.gene067922:intron | 40.0% |
| ! | TACACTAGTTGGTGCAGTAA+TGG | - | chr8.3:33686172-33686191 | MS.gene067922:CDS | 40.0% |
| ! | TGGATTTTCTCGCCACTATT+GGG | - | chr8.3:33685098-33685117 | MS.gene067922:intron | 40.0% |
| ! | TTCTACATGGCTTGGAACAT+TGG | - | chr8.3:33683450-33683469 | MS.gene067922:CDS | 40.0% |
| !! | GACATCTTTAGGACAAGGTT+TGG | - | chr8.3:33683383-33683402 | MS.gene067922:CDS | 40.0% |
| !!! | TGCTAATGTTTTTCAGGGGA+AGG | - | chr8.3:33683626-33683645 | MS.gene067922:CDS | 40.0% |
| !!! | TTTTCCAATAGCTCTAAGCC+AGG | - | chr8.3:33685644-33685663 | MS.gene067922:intron | 40.0% |
| AAACTAGGGCTACCGATATC+GGG | - | chr8.3:33686143-33686162 | MS.gene067922:CDS | 45.0% | |
| AACGATGTCTCCAACGCAAT+AGG | - | chr8.3:33685897-33685916 | MS.gene067922:intron | 45.0% | |
| AATGCCTGGCTTAGAGCTAT+TGG | + | chr8.3:33685651-33685670 | None:intergenic | 45.0% | |
| AGAACATAGCTCTTGCAACG+TGG | - | chr8.3:33684310-33684329 | MS.gene067922:intron | 45.0% | |
| AGTGTATGTGTCCCCGATAT+CGG | + | chr8.3:33686158-33686177 | None:intergenic | 45.0% | |
| ATGGGAACTTCTGTTGGATC+TGG | - | chr8.3:33683495-33683514 | MS.gene067922:CDS | 45.0% | |
| ATTCTACAAGGCGCAGCAAA+AGG | - | chr8.3:33685942-33685961 | MS.gene067922:CDS | 45.0% | |
| ATTGATGTTCTTGCTTGGGG+TGG | - | chr8.3:33685984-33686003 | MS.gene067922:CDS | 45.0% | |
| CCACGTGTAAATCACCGATA+AGG | + | chr8.3:33686291-33686310 | None:intergenic | 45.0% | |
| CCCCAAGCAAGAACATCAAT+CGG | + | chr8.3:33685984-33686003 | None:intergenic | 45.0% | |
| CCGATTGATGTTCTTGCTTG+GGG | - | chr8.3:33685981-33686000 | MS.gene067922:CDS | 45.0% | |
| CCTGATAGTAGATGGTCCAA+CGG | - | chr8.3:33684181-33684200 | MS.gene067922:intron | 45.0% | |
| CCTTATCGGTGATTTACACG+TGG | - | chr8.3:33686288-33686307 | MS.gene067922:CDS | 45.0% | |
| CTCCCTAGCAGAAGAAAACA+AGG | - | chr8.3:33684368-33684387 | MS.gene067922:intron | 45.0% | |
| CTGTATACAAACTGCATGGG+GGG | + | chr8.3:33685525-33685544 | None:intergenic | 45.0% | |
| GAACATAGCTCTTGCAACGT+GGG | - | chr8.3:33684311-33684330 | MS.gene067922:intron | 45.0% | |
| GAGTCCTATGTTCCTAACCA+AGG | + | chr8.3:33684351-33684370 | None:intergenic | 45.0% | |
| GCATGGGGGGAAAATATTAG+TGG | + | chr8.3:33685512-33685531 | None:intergenic | 45.0% | |
| GCTGTATTTCTTGGCGTAAC+TGG | - | chr8.3:33685588-33685607 | MS.gene067922:intron | 45.0% | |
| GGTGCGTTAGCTATTCTACA+AGG | - | chr8.3:33685930-33685949 | MS.gene067922:CDS | 45.0% | |
| GTAGGGTTTGGCCTAGTTTA+TGG | - | chr8.3:33685026-33685045 | MS.gene067922:intron | 45.0% | |
| GTATACAGTGCAAGTAACCC+AGG | - | chr8.3:33685537-33685556 | MS.gene067922:intron | 45.0% | |
| TGAAGGGGGGCTTAGAAAAA+GGG | - | chr8.3:33683928-33683947 | MS.gene067922:CDS | 45.0% | |
| TGGCAAGAGTGATTTCGTCA+TGG | - | chr8.3:33685078-33685097 | MS.gene067922:intron | 45.0% | |
| TTCATGGGCGGTTACTATTC+CGG | - | chr8.3:33686256-33686275 | MS.gene067922:CDS | 45.0% | |
| TTGAAGGGGGGCTTAGAAAA+AGG | - | chr8.3:33683927-33683946 | MS.gene067922:CDS | 45.0% | |
| ! | GATCTGGTGCATTGTCACTT+AGG | - | chr8.3:33683511-33683530 | MS.gene067922:CDS | 45.0% |
| ! | GTATAGTGGGAGCAATGGTA+GGG | - | chr8.3:33685009-33685028 | MS.gene067922:intron | 45.0% |
| ! | GTGGATTTGGAATCGTTGCA+GGG | - | chr8.3:33686003-33686022 | MS.gene067922:CDS | 45.0% |
| ! | TACGGATAGTTCTGTTGACC+AGG | + | chr8.3:33685698-33685717 | None:intergenic | 45.0% |
| ! | TGTATAGTGGGAGCAATGGT+AGG | - | chr8.3:33685008-33685027 | MS.gene067922:intron | 45.0% |
| ! | TTCATGTCATTTGCTCACGG+TGG | - | chr8.3:33685873-33685892 | MS.gene067922:intron | 45.0% |
| !! | CTGATAGCGGTGACTAACTT+AGG | - | chr8.3:33684157-33684176 | MS.gene067922:intron | 45.0% |
| !! | GTAGATGGTCCAACGGATTT+TGG | - | chr8.3:33684188-33684207 | MS.gene067922:intron | 45.0% |
| !!! | AAGCTTATGTTTTGGGGGAC+GGG | + | chr8.3:33685768-33685787 | None:intergenic | 45.0% |
| !!! | AGCTGTATTTTGGGGTTCAC+TGG | - | chr8.3:33685058-33685077 | MS.gene067922:intron | 45.0% |
| !!! | AGGTGCTGGAGCTGTATTTT+GGG | - | chr8.3:33685049-33685068 | MS.gene067922:intron | 45.0% |
| !!! | GAAGCTTATGTTTTGGGGGA+CGG | + | chr8.3:33685769-33685788 | None:intergenic | 45.0% |
| !!! | TTTTCCGGGGCATTGTTGAT+GGG | - | chr8.3:33683564-33683583 | MS.gene067922:CDS | 45.0% |
| AACGCAATAGGTCCATTGGC+CGG | - | chr8.3:33685909-33685928 | MS.gene067922:intron | 50.0% | |
| AACTAGGGCTACCGATATCG+GGG | - | chr8.3:33686144-33686163 | MS.gene067922:CDS | 50.0% | |
| ACCGATAAGGTAGCACCAAC+CGG | + | chr8.3:33686278-33686297 | None:intergenic | 50.0% | |
| ACGGAACTTACACCGACAAG+AGG | - | chr8.3:33686074-33686093 | MS.gene067922:CDS | 50.0% | |
| AGGATTTGCAGCCGAGTTTG+CGG | - | chr8.3:33686094-33686113 | MS.gene067922:CDS | 50.0% | |
| AGTTCCCATCAACAATGCCC+CGG | + | chr8.3:33683571-33683590 | None:intergenic | 50.0% | |
| ATCAGTCTTGAGCGTGAGGA+GGG | + | chr8.3:33684142-33684161 | None:intergenic | 50.0% | |
| CCGTTGGACCATCTACTATC+AGG | + | chr8.3:33684184-33684203 | None:intergenic | 50.0% | |
| CCTTACAAAACCGGCTAACG+AGG | - | chr8.3:33684256-33684275 | MS.gene067922:intron | 50.0% | |
| CGTTGCAGGGCTAATGATGT+GGG | - | chr8.3:33686016-33686035 | MS.gene067922:CDS | 50.0% | |
| CTCACGCTCAAGACTGATAG+CGG | - | chr8.3:33684144-33684163 | MS.gene067922:intron | 50.0% | |
| CTCCAACGCAATAGGTCCAT+TGG | - | chr8.3:33685905-33685924 | MS.gene067922:intron | 50.0% | |
| CTCCAGCACCTCCATAAACT+AGG | + | chr8.3:33685040-33685059 | None:intergenic | 50.0% | |
| GATACTGCTGCTCCCAATAG+TGG | + | chr8.3:33685113-33685132 | None:intergenic | 50.0% | |
| GCTAAGTGGGAAAGCAGCAA+AGG | + | chr8.3:33685619-33685638 | None:intergenic | 50.0% | |
| GGAGATTTGTGCTTCATGGG+CGG | - | chr8.3:33686244-33686263 | MS.gene067922:CDS | 50.0% | |
| GGGTTTGGCCTAGTTTATGG+AGG | - | chr8.3:33685029-33685048 | MS.gene067922:intron | 50.0% | |
| GTTGCAGGGCTAATGATGTG+GGG | - | chr8.3:33686017-33686036 | MS.gene067922:CDS | 50.0% | |
| TATCAGTCTTGAGCGTGAGG+AGG | + | chr8.3:33684143-33684162 | None:intergenic | 50.0% | |
| TCGGCTGCAAATCCTCTTGT+CGG | + | chr8.3:33686089-33686108 | None:intergenic | 50.0% | |
| TCGGGGACACATACACTAGT+TGG | - | chr8.3:33686161-33686180 | MS.gene067922:CDS | 50.0% | |
| TCGTTGCAGGGCTAATGATG+TGG | - | chr8.3:33686015-33686034 | MS.gene067922:CDS | 50.0% | |
| TGAAGCAAACAGAACCACCG+AGG | + | chr8.3:33686123-33686142 | None:intergenic | 50.0% | |
| TGCTGCTGGTACTTGGTTAC+AGG | - | chr8.3:33683686-33683705 | MS.gene067922:CDS | 50.0% | |
| ! | CGGAGTTTTCGGTTACATGC+AGG | - | chr8.3:33685836-33685855 | MS.gene067922:intron | 50.0% |
| ! | CTAAGCCAGGCATTAGCTTG+TGG | - | chr8.3:33685657-33685676 | MS.gene067922:intron | 50.0% |
| ! | CTTTCTTCACTTGCTGCTGC+TGG | - | chr8.3:33683672-33683691 | MS.gene067922:CDS | 50.0% |
| ! | GGTGGATTTGGAATCGTTGC+AGG | - | chr8.3:33686002-33686021 | MS.gene067922:CDS | 50.0% |
| ! | GTTCTTGCTTGGGGTGGATT+TGG | - | chr8.3:33685990-33686009 | MS.gene067922:CDS | 50.0% |
| ! | GTTGGTGCAGTAATGGGAGT+TGG | - | chr8.3:33686179-33686198 | MS.gene067922:CDS | 50.0% |
| ! | TGTGTTGACAGCTGCAGTGT+TGG | - | chr8.3:33683539-33683558 | MS.gene067922:CDS | 50.0% |
| !! | ATTAGCTTGTGGAACCGTCG+GGG | - | chr8.3:33685668-33685687 | MS.gene067922:intron | 50.0% |
| !! | CATTAGCTTGTGGAACCGTC+GGG | - | chr8.3:33685667-33685686 | MS.gene067922:intron | 50.0% |
| !! | CCTCGTTAGCCGGTTTTGTA+AGG | + | chr8.3:33684259-33684278 | None:intergenic | 50.0% |
| !! | CTGCAGTGTTGGAGTTTTCC+GGG | - | chr8.3:33683550-33683569 | MS.gene067922:CDS | 50.0% |
| !! | GCATTAGCTTGTGGAACCGT+CGG | - | chr8.3:33685666-33685685 | MS.gene067922:intron | 50.0% |
| !! | GCTGCAGTGTTGGAGTTTTC+CGG | - | chr8.3:33683549-33683568 | MS.gene067922:CDS | 50.0% |
| !! | GGTGCTGGAGCTGTATTTTG+GGG | - | chr8.3:33685050-33685069 | MS.gene067922:intron | 50.0% |
| !! | TCCGGTTGGTGCTACCTTAT+CGG | - | chr8.3:33686274-33686293 | MS.gene067922:CDS | 50.0% |
| !! | TGCAGTGTTGGAGTTTTCCG+GGG | - | chr8.3:33683551-33683570 | MS.gene067922:CDS | 50.0% |
| !!! | GAGGTGCTGGAGCTGTATTT+TGG | - | chr8.3:33685048-33685067 | MS.gene067922:intron | 50.0% |
| !!! | GTTTTCCGGGGCATTGTTGA+TGG | - | chr8.3:33683563-33683582 | MS.gene067922:CDS | 50.0% |
| ATGGGAGTTGGATTCGCGAG+AGG | - | chr8.3:33686191-33686210 | MS.gene067922:CDS | 55.0% | |
| CGCTATCAGTCTTGAGCGTG+AGG | + | chr8.3:33684146-33684165 | None:intergenic | 55.0% | |
| CGGTTCCACAAGCTAATGCC+TGG | + | chr8.3:33685665-33685684 | None:intergenic | 55.0% | |
| GGCCAATGGACCTATTGCGT+TGG | + | chr8.3:33685910-33685929 | None:intergenic | 55.0% | |
| GTGGGAGCAATGGTAGGGTT+TGG | - | chr8.3:33685014-33685033 | MS.gene067922:intron | 55.0% | |
| TGGGCGGTTACTATTCCGGT+TGG | - | chr8.3:33686260-33686279 | MS.gene067922:CDS | 55.0% | |
| ! | ATAGCTAACGCACCGGCCAA+TGG | + | chr8.3:33685924-33685943 | None:intergenic | 55.0% |
| ! | CACTTGCTGCTGCTGGTACT+TGG | - | chr8.3:33683679-33683698 | MS.gene067922:CDS | 55.0% |
| ! | GGCCTAGTTTATGGAGGTGC+TGG | - | chr8.3:33685035-33685054 | MS.gene067922:intron | 55.0% |
| GTTGACCAGGAAAGCCCCGA+CGG | + | chr8.3:33685685-33685704 | None:intergenic | 60.0% | |
| ! | CTGCAGCTGCTGCTTGTCCT+GGG | + | chr8.3:33685557-33685576 | None:intergenic | 60.0% |
| ! | TGGGGGACGGGTTCCAAATG+TGG | + | chr8.3:33685756-33685775 | None:intergenic | 60.0% |
| AGCCGAGTTTGCGGCTGCCT+CGG | - | chr8.3:33686103-33686122 | MS.gene067922:CDS | 65.0% | |
| CACCGAGGCAGCCGCAAACT+CGG | + | chr8.3:33686108-33686127 | None:intergenic | 65.0% | |
| TGGAACCGTCGGGGCTTTCC+TGG | - | chr8.3:33685677-33685696 | MS.gene067922:intron | 65.0% | |
| ! | GCTGCAGCTGCTGCTTGTCC+TGG | + | chr8.3:33685558-33685577 | None:intergenic | 65.0% |
| CGAGTTTGCGGCTGCCTCGG+TGG | - | chr8.3:33686106-33686125 | MS.gene067922:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 33683294 | 33686343 | 33683294 | ID=MS.gene067922 |
| chr8.3 | mRNA | 33683294 | 33686343 | 33683294 | ID=MS.gene067922.t1;Parent=MS.gene067922 |
| chr8.3 | exon | 33685930 | 33686343 | 33685930 | ID=MS.gene067922.t1.exon1;Parent=MS.gene067922.t1 |
| chr8.3 | CDS | 33685930 | 33686343 | 33685930 | ID=cds.MS.gene067922.t1;Parent=MS.gene067922.t1 |
| chr8.3 | exon | 33684477 | 33684668 | 33684477 | ID=MS.gene067922.t1.exon2;Parent=MS.gene067922.t1 |
| chr8.3 | CDS | 33684477 | 33684668 | 33684477 | ID=cds.MS.gene067922.t1;Parent=MS.gene067922.t1 |
| chr8.3 | exon | 33683294 | 33684103 | 33683294 | ID=MS.gene067922.t1.exon3;Parent=MS.gene067922.t1 |
| chr8.3 | CDS | 33683294 | 33684103 | 33683294 | ID=cds.MS.gene067922.t1;Parent=MS.gene067922.t1 |
| Gene Sequence |
| Protein sequence |
