Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22764.t1 | XP_013450632.1 | 88.2 | 498 | 51 | 3 | 1 | 491 | 61 | 557 | 1.90E-218 | 768.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22764.t1 | A0A072UFV0 | 88.2 | 498 | 51 | 3 | 1 | 491 | 61 | 557 | 1.4e-218 | 768.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene22764 | 0.815551 | 8.72E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene22764 | 0.809879 | 1.52E-50 | -1.69E-46 |
| MS.gene049346 | MS.gene22764 | 0.812739 | 3.64E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene22764 | 0.81723 | 3.67E-52 | -1.69E-46 |
| MS.gene049910 | MS.gene22764 | 0.835999 | 1.21E-56 | -1.69E-46 |
| MS.gene049993 | MS.gene22764 | 0.814189 | 1.75E-51 | -1.69E-46 |
| MS.gene050301 | MS.gene22764 | 0.86469 | 1.01E-64 | -1.69E-46 |
| MS.gene050397 | MS.gene22764 | 0.846951 | 1.57E-59 | -1.69E-46 |
| MS.gene050400 | MS.gene22764 | 0.821539 | 3.83E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene22764 | 0.825352 | 4.91E-54 | -1.69E-46 |
| MS.gene050426 | MS.gene22764 | -0.844839 | 5.90E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene22764 | 0.8714 | 7.04E-67 | -1.69E-46 |
| MS.gene050529 | MS.gene22764 | 0.857356 | 1.73E-62 | -1.69E-46 |
| MS.gene050558 | MS.gene22764 | 0.822184 | 2.71E-53 | -1.69E-46 |
| MS.gene050560 | MS.gene22764 | 0.801521 | 8.66E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene22764 | 0.821528 | 3.85E-53 | -1.69E-46 |
| MS.gene050625 | MS.gene22764 | 0.800653 | 1.30E-48 | -1.69E-46 |
| MS.gene050650 | MS.gene22764 | 0.806277 | 8.90E-50 | -1.69E-46 |
| MS.gene050670 | MS.gene22764 | 0.886454 | 3.37E-72 | -1.69E-46 |
| MS.gene050812 | MS.gene22764 | 0.844268 | 8.40E-59 | -1.69E-46 |
| MS.gene05101 | MS.gene22764 | 0.829499 | 4.98E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene22764 | 0.834804 | 2.43E-56 | -1.69E-46 |
| MS.gene051208 | MS.gene22764 | 0.82158 | 3.74E-53 | -1.69E-46 |
| MS.gene051387 | MS.gene22764 | 0.821043 | 4.98E-53 | -1.69E-46 |
| MS.gene051525 | MS.gene22764 | 0.910855 | 1.17E-82 | -1.69E-46 |
| MS.gene051582 | MS.gene22764 | 0.876933 | 9.41E-69 | -1.69E-46 |
| MS.gene051588 | MS.gene22764 | 0.808541 | 2.94E-50 | -1.69E-46 |
| MS.gene051860 | MS.gene22764 | 0.858835 | 6.27E-63 | -1.69E-46 |
| MS.gene051983 | MS.gene22764 | 0.812032 | 5.20E-51 | -1.69E-46 |
| MS.gene052011 | MS.gene22764 | -0.873554 | 1.34E-67 | -1.69E-46 |
| MS.gene052077 | MS.gene22764 | 0.826156 | 3.17E-54 | -1.69E-46 |
| MS.gene052128 | MS.gene22764 | -0.80867 | 2.76E-50 | -1.69E-46 |
| MS.gene052134 | MS.gene22764 | 0.827947 | 1.18E-54 | -1.69E-46 |
| MS.gene052135 | MS.gene22764 | 0.84118 | 5.55E-58 | -1.69E-46 |
| MS.gene052188 | MS.gene22764 | 0.866032 | 3.84E-65 | -1.69E-46 |
| MS.gene052253 | MS.gene22764 | 0.885959 | 5.18E-72 | -1.69E-46 |
| MS.gene052255 | MS.gene22764 | 0.81315 | 2.96E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene22764 | 0.866211 | 3.36E-65 | -1.69E-46 |
| MS.gene052340 | MS.gene22764 | 0.868914 | 4.58E-66 | -1.69E-46 |
| MS.gene052414 | MS.gene22764 | 0.81937 | 1.20E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene22764 | 0.800367 | 1.49E-48 | -1.69E-46 |
| MS.gene052481 | MS.gene22764 | 0.872631 | 2.74E-67 | -1.69E-46 |
| MS.gene052485 | MS.gene22764 | 0.856401 | 3.30E-62 | -1.69E-46 |
| MS.gene052501 | MS.gene22764 | 0.810771 | 9.77E-51 | -1.69E-46 |
| MS.gene052505 | MS.gene22764 | 0.825317 | 5.01E-54 | -1.69E-46 |
| MS.gene052982 | MS.gene22764 | 0.837363 | 5.43E-57 | -1.69E-46 |
| MS.gene053169 | MS.gene22764 | 0.812634 | 3.84E-51 | -1.69E-46 |
| MS.gene053330 | MS.gene22764 | 0.842796 | 2.08E-58 | -1.69E-46 |
| MS.gene053557 | MS.gene22764 | 0.827628 | 1.41E-54 | -1.69E-46 |
| MS.gene053579 | MS.gene22764 | 0.80107 | 1.07E-48 | -1.69E-46 |
| MS.gene053836 | MS.gene22764 | 0.854637 | 1.08E-61 | -1.69E-46 |
| MS.gene053928 | MS.gene22764 | 0.813308 | 2.73E-51 | -1.69E-46 |
| MS.gene053971 | MS.gene22764 | 0.80768 | 4.49E-50 | -1.69E-46 |
| MS.gene054102 | MS.gene22764 | 0.814501 | 1.49E-51 | -1.69E-46 |
| MS.gene054123 | MS.gene22764 | 0.812935 | 3.30E-51 | -1.69E-46 |
| MS.gene05413 | MS.gene22764 | 0.803287 | 3.75E-49 | -1.69E-46 |
| MS.gene054183 | MS.gene22764 | 0.863756 | 1.98E-64 | -1.69E-46 |
| MS.gene054349 | MS.gene22764 | 0.832393 | 9.70E-56 | -1.69E-46 |
| MS.gene054556 | MS.gene22764 | 0.834315 | 3.22E-56 | -1.69E-46 |
| MS.gene05455 | MS.gene22764 | 0.822456 | 2.35E-53 | -1.69E-46 |
| MS.gene054719 | MS.gene22764 | 0.87887 | 1.98E-69 | -1.69E-46 |
| MS.gene054920 | MS.gene22764 | 0.807712 | 4.42E-50 | -1.69E-46 |
| MS.gene054983 | MS.gene22764 | 0.813031 | 3.14E-51 | -1.69E-46 |
| MS.gene055116 | MS.gene22764 | 0.877028 | 8.73E-69 | -1.69E-46 |
| MS.gene055277 | MS.gene22764 | 0.808799 | 2.59E-50 | -1.69E-46 |
| MS.gene055369 | MS.gene22764 | 0.847272 | 1.28E-59 | -1.69E-46 |
| MS.gene055370 | MS.gene22764 | 0.810882 | 9.24E-51 | -1.69E-46 |
| MS.gene055390 | MS.gene22764 | 0.803993 | 2.67E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene22764 | 0.807836 | 4.16E-50 | -1.69E-46 |
| MS.gene055428 | MS.gene22764 | 0.815854 | 7.47E-52 | -1.69E-46 |
| MS.gene055539 | MS.gene22764 | 0.842412 | 2.63E-58 | -1.69E-46 |
| MS.gene05553 | MS.gene22764 | 0.89843 | 5.35E-77 | -1.69E-46 |
| MS.gene055564 | MS.gene22764 | 0.82567 | 4.13E-54 | -1.69E-46 |
| MS.gene05556 | MS.gene22764 | 0.823176 | 1.59E-53 | -1.69E-46 |
| MS.gene05594 | MS.gene22764 | 0.828963 | 6.71E-55 | -1.69E-46 |
| MS.gene056191 | MS.gene22764 | 0.844642 | 6.66E-59 | -1.69E-46 |
| MS.gene056407 | MS.gene22764 | 0.866275 | 3.21E-65 | -1.69E-46 |
| MS.gene056410 | MS.gene22764 | 0.805655 | 1.20E-49 | -1.69E-46 |
| MS.gene056451 | MS.gene22764 | 0.820748 | 5.82E-53 | -1.69E-46 |
| MS.gene056511 | MS.gene22764 | 0.82183 | 3.28E-53 | -1.69E-46 |
| MS.gene056514 | MS.gene22764 | 0.834473 | 2.94E-56 | -1.69E-46 |
| MS.gene056612 | MS.gene22764 | 0.836236 | 1.05E-56 | -1.69E-46 |
| MS.gene056659 | MS.gene22764 | 0.804264 | 2.35E-49 | -1.69E-46 |
| MS.gene056723 | MS.gene22764 | 0.863305 | 2.74E-64 | -1.69E-46 |
| MS.gene056796 | MS.gene22764 | 0.818985 | 1.47E-52 | -1.69E-46 |
| MS.gene056846 | MS.gene22764 | 0.811757 | 5.97E-51 | -1.69E-46 |
| MS.gene056877 | MS.gene22764 | 0.807701 | 4.44E-50 | -1.69E-46 |
| MS.gene056899 | MS.gene22764 | -0.838599 | 2.61E-57 | -1.69E-46 |
| MS.gene056979 | MS.gene22764 | 0.803649 | 3.15E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene22764 | 0.811838 | 5.73E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene22764 | 0.824385 | 8.31E-54 | -1.69E-46 |
| MS.gene057121 | MS.gene22764 | 0.852521 | 4.37E-61 | -1.69E-46 |
| MS.gene057124 | MS.gene22764 | 0.824739 | 6.86E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene22764 | 0.814015 | 1.91E-51 | -1.69E-46 |
| MS.gene057330 | MS.gene22764 | 0.807692 | 4.46E-50 | -1.69E-46 |
| MS.gene057396 | MS.gene22764 | 0.840976 | 6.28E-58 | -1.69E-46 |
| MS.gene057448 | MS.gene22764 | 0.829224 | 5.80E-55 | -1.69E-46 |
| MS.gene057449 | MS.gene22764 | 0.814251 | 1.69E-51 | -1.69E-46 |
| MS.gene057450 | MS.gene22764 | 0.818488 | 1.91E-52 | -1.69E-46 |
| MS.gene057476 | MS.gene22764 | 0.845273 | 4.50E-59 | -1.69E-46 |
| MS.gene057749 | MS.gene22764 | 0.868878 | 4.71E-66 | -1.69E-46 |
| MS.gene057823 | MS.gene22764 | 0.85831 | 8.99E-63 | -1.69E-46 |
| MS.gene057825 | MS.gene22764 | 0.827879 | 1.23E-54 | -1.69E-46 |
| MS.gene057833 | MS.gene22764 | 0.809047 | 2.30E-50 | -1.69E-46 |
| MS.gene057888 | MS.gene22764 | 0.815953 | 7.10E-52 | -1.69E-46 |
| MS.gene058002 | MS.gene22764 | 0.88183 | 1.73E-70 | -1.69E-46 |
| MS.gene058007 | MS.gene22764 | 0.837273 | 5.73E-57 | -1.69E-46 |
| MS.gene05811 | MS.gene22764 | 0.868543 | 6.04E-66 | -1.69E-46 |
| MS.gene058142 | MS.gene22764 | 0.848041 | 7.89E-60 | -1.69E-46 |
| MS.gene058233 | MS.gene22764 | 0.837276 | 5.72E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene22764 | 0.842077 | 3.22E-58 | -1.69E-46 |
| MS.gene058293 | MS.gene22764 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene058376 | MS.gene22764 | 0.816541 | 5.24E-52 | -1.69E-46 |
| MS.gene05842 | MS.gene22764 | 0.80992 | 1.49E-50 | -1.69E-46 |
| MS.gene058444 | MS.gene22764 | 0.870904 | 1.03E-66 | -1.69E-46 |
| MS.gene058660 | MS.gene22764 | 0.840957 | 6.36E-58 | -1.69E-46 |
| MS.gene058700 | MS.gene22764 | 0.875634 | 2.64E-68 | -1.69E-46 |
| MS.gene05886 | MS.gene22764 | 0.845793 | 3.25E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene22764 | 0.835924 | 1.26E-56 | -1.69E-46 |
| MS.gene058995 | MS.gene22764 | 0.806145 | 9.48E-50 | -1.69E-46 |
| MS.gene059011 | MS.gene22764 | 0.831843 | 1.33E-55 | -1.69E-46 |
| MS.gene05907 | MS.gene22764 | 0.895624 | 8.03E-76 | -1.69E-46 |
| MS.gene059082 | MS.gene22764 | 0.840535 | 8.20E-58 | -1.69E-46 |
| MS.gene059141 | MS.gene22764 | 0.879681 | 1.02E-69 | -1.69E-46 |
| MS.gene059247 | MS.gene22764 | 0.800125 | 1.67E-48 | -1.69E-46 |
| MS.gene059285 | MS.gene22764 | 0.80935 | 1.98E-50 | -1.69E-46 |
| MS.gene059294 | MS.gene22764 | 0.807998 | 3.84E-50 | -1.69E-46 |
| MS.gene059366 | MS.gene22764 | 0.800964 | 1.13E-48 | -1.69E-46 |
| MS.gene059420 | MS.gene22764 | 0.879847 | 8.92E-70 | -1.69E-46 |
| MS.gene059462 | MS.gene22764 | 0.843957 | 1.02E-58 | -1.69E-46 |
| MS.gene059499 | MS.gene22764 | 0.806993 | 6.28E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene22764 | 0.818472 | 1.93E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene22764 | 0.858431 | 8.28E-63 | -1.69E-46 |
| MS.gene059676 | MS.gene22764 | 0.848913 | 4.53E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene22764 | 0.861091 | 1.31E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene22764 | 0.848798 | 4.87E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene22764 | 0.853321 | 2.58E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene22764 | 0.846231 | 2.47E-59 | -1.69E-46 |
| MS.gene059894 | MS.gene22764 | 0.819809 | 9.56E-53 | -1.69E-46 |
| MS.gene059933 | MS.gene22764 | 0.837943 | 3.86E-57 | -1.69E-46 |
| MS.gene060247 | MS.gene22764 | 0.819563 | 1.09E-52 | -1.69E-46 |
| MS.gene060403 | MS.gene22764 | 0.879073 | 1.68E-69 | -1.69E-46 |
| MS.gene060407 | MS.gene22764 | 0.8437 | 1.19E-58 | -1.69E-46 |
| MS.gene060986 | MS.gene22764 | 0.845216 | 4.66E-59 | -1.69E-46 |
| MS.gene061049 | MS.gene22764 | 0.8574 | 1.67E-62 | -1.69E-46 |
| MS.gene061051 | MS.gene22764 | -0.821806 | 3.32E-53 | -1.69E-46 |
| MS.gene061114 | MS.gene22764 | -0.807777 | 4.28E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene22764 | 0.862695 | 4.22E-64 | -1.69E-46 |
| MS.gene061159 | MS.gene22764 | 0.841958 | 3.46E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22764.t1 | MTR_7g117530 | 92.972 | 498 | 27 | 3 | 1 | 491 | 61 | 557 | 0.0 | 890 |
| MS.gene22764.t1 | MTR_7g117530 | 93.079 | 419 | 22 | 2 | 80 | 491 | 1 | 419 | 0.0 | 741 |
| MS.gene22764.t1 | MTR_7g117530 | 91.646 | 407 | 27 | 2 | 92 | 491 | 17 | 423 | 0.0 | 702 |
| MS.gene22764.t1 | MTR_8g464010 | 39.355 | 155 | 87 | 1 | 25 | 172 | 60 | 214 | 3.34e-28 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene22764.t1 | AT1G53800 | 48.081 | 495 | 197 | 11 | 31 | 488 | 99 | 570 | 1.51e-135 | 403 |
| MS.gene22764.t1 | AT1G53800 | 48.081 | 495 | 197 | 11 | 31 | 488 | 99 | 570 | 1.51e-135 | 403 |
| MS.gene22764.t1 | AT1G53800 | 48.081 | 495 | 197 | 11 | 31 | 488 | 95 | 566 | 2.04e-135 | 403 |
| MS.gene22764.t1 | AT1G53800 | 44.191 | 439 | 185 | 11 | 87 | 488 | 1 | 416 | 2.96e-100 | 308 |
| MS.gene22764.t1 | AT1G53250 | 42.553 | 141 | 79 | 1 | 30 | 170 | 93 | 231 | 2.81e-26 | 110 |
Find 106 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGATCGGCTTAACAATTT+TGG | 0.147374 | 7.3:-202341 | None:intergenic |
| TACAAGTTCTCTGAAGATTT+TGG | 0.168425 | 7.3:+203056 | MS.gene22764:CDS |
| AGCTTCAGCTATAAGCTTTC+TGG | 0.177934 | 7.3:-202871 | None:intergenic |
| CCTTCTCTGTTCAGGGGACT+TGG | 0.194217 | 7.3:-201006 | None:intergenic |
| CTATAACTGGGCCTTGTTCT+AGG | 0.249045 | 7.3:-202247 | None:intergenic |
| CAGAAGCTATTGCTGCAAAA+TGG | 0.252169 | 7.3:+201036 | MS.gene22764:CDS |
| ATGGGCAGTCTTGGTTTATC+TGG | 0.254259 | 7.3:-203166 | None:intergenic |
| AAGAAAATCCCCTGCCTATA+AGG | 0.268562 | 7.3:+202372 | MS.gene22764:CDS |
| TCAGAAATGGCCCAAGTAAA+TGG | 0.271344 | 7.3:+203008 | MS.gene22764:CDS |
| GTTTCCCTTTGCTGATTTGA+TGG | 0.273722 | 7.3:-203185 | None:intergenic |
| GGAGAGTTGTGCACTATAAC+TGG | 0.300149 | 7.3:-202260 | None:intergenic |
| AAGTGATTGTTGTTGAATTT+AGG | 0.317748 | 7.3:-199977 | None:intergenic |
| AGAATTTCTAAAGCTAATAA+AGG | 0.335079 | 7.3:+200100 | MS.gene22764:CDS |
| TCCCTGGAGAGACCAGTTAA+TGG | 0.338872 | 7.3:+203086 | MS.gene22764:CDS |
| TTGGGTGCTCTGTTGCTAAC+TGG | 0.340197 | 7.3:-200987 | None:intergenic |
| CTGTTCATCCAAGGTTTCAT+AGG | 0.344649 | 7.3:-200910 | None:intergenic |
| TGCTTTCTTCCTTTGTTCCA+TGG | 0.347511 | 7.3:-200130 | None:intergenic |
| CCATTGGTTAGGTGAAGTTC+TGG | 0.357997 | 7.3:-203113 | None:intergenic |
| TTGTATGGCTTGAGTTTGTC+TGG | 0.361484 | 7.3:-202461 | None:intergenic |
| AAAATGAAGTTGACTAATCT+TGG | 0.365767 | 7.3:+200608 | MS.gene22764:CDS |
| ATTCACCAAAGGATCCTTAT+AGG | 0.367988 | 7.3:-202386 | None:intergenic |
| GGTCTACCTTGCTTGTTGTA+TGG | 0.369499 | 7.3:-202476 | None:intergenic |
| GCTGATTTGATGGGCAGTCT+TGG | 0.385985 | 7.3:-203175 | None:intergenic |
| TAGATTGTGTTTCATCTTCA+AGG | 0.386322 | 7.3:-203253 | None:intergenic |
| CCCTGCCTATAAGGATCCTT+TGG | 0.391549 | 7.3:+202381 | MS.gene22764:CDS |
| CAGAAACTTTGCAGAAGATC+AGG | 0.392693 | 7.3:+200247 | MS.gene22764:intron |
| TAATTATGATGAAGCATAAT+CGG | 0.403362 | 7.3:-200022 | None:intergenic |
| CGCCATTAACTGGTCTCTCC+AGG | 0.404361 | 7.3:-203088 | None:intergenic |
| GTTCTTTATCATCTCTAGCT+TGG | 0.409338 | 7.3:-202410 | None:intergenic |
| GCATCTAGGCAAGGCTTTGT+TGG | 0.411974 | 7.3:+200864 | MS.gene22764:CDS |
| ATGTTGTGCGTCCATTTACT+TGG | 0.417420 | 7.3:-203019 | None:intergenic |
| TAGGCAAGGCTTTGTTGGTC+AGG | 0.417991 | 7.3:+200869 | MS.gene22764:CDS |
| CTTCTCTGTTCAGGGGACTT+GGG | 0.418289 | 7.3:-201005 | None:intergenic |
| CGCAGCAACCTCCAGTGCCT+TGG | 0.418723 | 7.3:-202811 | None:intergenic |
| AGTTCTGGAACGCCATTAAC+TGG | 0.430767 | 7.3:-203098 | None:intergenic |
| ATTTAATTGCAGAAGCATCT+AGG | 0.431183 | 7.3:+200850 | MS.gene22764:CDS |
| TGAGAAAGCGGCCAAGGCAC+TGG | 0.455747 | 7.3:+202800 | MS.gene22764:CDS |
| TTTCCCTTTGCTGATTTGAT+GGG | 0.456711 | 7.3:-203184 | None:intergenic |
| TAGTTTGAGCGAGGTCAATC+AGG | 0.457771 | 7.3:+202953 | MS.gene22764:CDS |
| TTCAGTAGAATGATGATACT+TGG | 0.462498 | 7.3:-202218 | None:intergenic |
| TTACTTGGGCCATTTCTGAA+TGG | 0.473231 | 7.3:-203004 | None:intergenic |
| AGTTCAAAACCATTCAGAAA+TGG | 0.473350 | 7.3:+202995 | MS.gene22764:CDS |
| TCAGCAAAGGGAAACAGAAC+AGG | 0.475127 | 7.3:+203193 | MS.gene22764:CDS |
| ACCAAAGGATCCTTATAGGC+AGG | 0.479827 | 7.3:-202382 | None:intergenic |
| AAGAAGCACATCCATTGGTT+AGG | 0.484112 | 7.3:-203124 | None:intergenic |
| AGAAGCTATTGCTGCAAAAT+GGG | 0.486163 | 7.3:+201037 | MS.gene22764:CDS |
| TCAGAGAACTTGTAGAAGCT+TGG | 0.494752 | 7.3:-203047 | None:intergenic |
| ATTAGAGAAGACTGAGCAAT+GGG | 0.497339 | 7.3:-202843 | None:intergenic |
| TGTTGAAGAAAGGAAACAAA+TGG | 0.513256 | 7.3:+200956 | MS.gene22764:CDS |
| TTGCAGAGCAGACTCTTTCA+CGG | 0.513414 | 7.3:-202192 | None:intergenic |
| TTGGTCAGGAAGAGCTGCAA+TGG | 0.516970 | 7.3:+200883 | MS.gene22764:CDS |
| AATGAGGCGTGGGAGGAAGA+TGG | 0.526849 | 7.3:+200797 | MS.gene22764:CDS |
| AGATTGTGTTTCATCTTCAA+GGG | 0.528242 | 7.3:-203252 | None:intergenic |
| AGATGACTGTAGTGTCCCTT+CGG | 0.529223 | 7.3:+202929 | MS.gene22764:CDS |
| CTGCTTAAGCTGTTCATCCA+AGG | 0.529761 | 7.3:-200919 | None:intergenic |
| AAAGGAAGAAAGCACAGTCC+TGG | 0.530236 | 7.3:+200139 | MS.gene22764:CDS |
| GGTTGCTCAATGTTGAAGAA+AGG | 0.534470 | 7.3:+200946 | MS.gene22764:CDS |
| AACTTCTCGCTCTCATCAAG+TGG | 0.537218 | 7.3:-200067 | None:intergenic |
| ATCTGGCTATTCAAACTGAA+AGG | 0.537699 | 7.3:-203149 | None:intergenic |
| GCGTGGGAGGAAGATGGTGC+AGG | 0.541404 | 7.3:+200803 | MS.gene22764:CDS |
| CTGCCCATCAAATCAGCAAA+GGG | 0.542744 | 7.3:+203181 | MS.gene22764:CDS |
| AGCTATGGGAAATGAGGCGT+GGG | 0.551123 | 7.3:+200787 | MS.gene22764:CDS |
| ATGGAATTCCTATGAAACCT+TGG | 0.554470 | 7.3:+200902 | MS.gene22764:CDS |
| AGTATCATCATTCTACTGAA+AGG | 0.554917 | 7.3:+202221 | MS.gene22764:CDS |
| TGTTGTGCGTCCATTTACTT+GGG | 0.559138 | 7.3:-203018 | None:intergenic |
| ATTCAACAACAATCACTTGG+AGG | 0.563513 | 7.3:+199982 | MS.gene22764:CDS |
| TGAAGCTGAGAAAGCGGCCA+AGG | 0.564202 | 7.3:+202794 | MS.gene22764:CDS |
| TGAGAAAGCTATGGGAAATG+AGG | 0.567042 | 7.3:+200781 | MS.gene22764:CDS |
| CTTGGATGAACAGCTTAAGC+AGG | 0.568138 | 7.3:+200920 | MS.gene22764:CDS |
| CTAATAAAGGAAACACTCCA+TGG | 0.572287 | 7.3:+200113 | MS.gene22764:CDS |
| CCTCGCTATGCAGAATCCTA+AGG | 0.572868 | 7.3:+200281 | MS.gene22764:CDS |
| CAAGGCACTGGAGGTTGCTG+CGG | 0.574810 | 7.3:+202812 | MS.gene22764:CDS |
| TGCTGGAGTGAGAAAGCTAT+GGG | 0.576084 | 7.3:+200773 | MS.gene22764:CDS |
| CCAAGTCCCCTGAACAGAGA+AGG | 0.577586 | 7.3:+201006 | MS.gene22764:CDS |
| CCAAAGGATCCTTATAGGCA+GGG | 0.578428 | 7.3:-202381 | None:intergenic |
| TGATGAAGCATAATCGGATG+AGG | 0.579917 | 7.3:-200016 | None:intergenic |
| CAAAGGATCCTTATAGGCAG+GGG | 0.581887 | 7.3:-202380 | None:intergenic |
| GTGCTGGAGTGAGAAAGCTA+TGG | 0.583096 | 7.3:+200772 | MS.gene22764:CDS |
| AGAAACTTTGCAGAAGATCA+GGG | 0.584197 | 7.3:+200248 | MS.gene22764:intron |
| AGGAGAGTTGCTGCTTTGAG+TGG | 0.585215 | 7.3:+200823 | MS.gene22764:CDS |
| AGGTAAAGAAGCACATCCAT+TGG | 0.589919 | 7.3:-203129 | None:intergenic |
| TAAATTCAACAACAATCACT+TGG | 0.594861 | 7.3:+199979 | MS.gene22764:CDS |
| GCCATTAACTGGTCTCTCCA+GGG | 0.596953 | 7.3:-203087 | None:intergenic |
| ATTGCAGAAGCATCTAGGCA+AGG | 0.597944 | 7.3:+200855 | MS.gene22764:CDS |
| ACCTCGCTCAAACTAACCGA+AGG | 0.599556 | 7.3:-202945 | None:intergenic |
| GAGAGTTGTGCACTATAACT+GGG | 0.604300 | 7.3:-202259 | None:intergenic |
| TATGGGAAATGAGGCGTGGG+AGG | 0.606508 | 7.3:+200790 | MS.gene22764:CDS |
| CCCTTCGGTTAGTTTGAGCG+AGG | 0.606707 | 7.3:+202944 | MS.gene22764:CDS |
| TATTAGAGAAGACTGAGCAA+TGG | 0.606763 | 7.3:-202844 | None:intergenic |
| AAGCTATGGGAAATGAGGCG+TGG | 0.610945 | 7.3:+200786 | MS.gene22764:CDS |
| GGAAACACTCCATGGAACAA+AGG | 0.613565 | 7.3:+200121 | MS.gene22764:CDS |
| ACTGCCCATCAAATCAGCAA+AGG | 0.614011 | 7.3:+203180 | MS.gene22764:CDS |
| TGATTGTTGTTGAATTTAGG+TGG | 0.614725 | 7.3:-199974 | None:intergenic |
| ATGAACAGCTTAAGCAGGAG+TGG | 0.618338 | 7.3:+200925 | MS.gene22764:CDS |
| GATTGCTGAAGCTGAGAAAG+CGG | 0.618657 | 7.3:+202788 | MS.gene22764:CDS |
| CAGAGCACAAAGAGCTTCCG+CGG | 0.621196 | 7.3:+202435 | MS.gene22764:CDS |
| TTGAGTTTGTCTGGTATCCG+CGG | 0.621664 | 7.3:-202452 | None:intergenic |
| CTCAAGCCATACAACAAGCA+AGG | 0.624160 | 7.3:+202470 | MS.gene22764:CDS |
| CTGAAAGGAAACCTAGAACA+AGG | 0.624217 | 7.3:+202236 | MS.gene22764:CDS |
| CCAGAACTTCACCTAACCAA+TGG | 0.625712 | 7.3:+203113 | MS.gene22764:CDS |
| AAGAAAGGAAACAAATGGCG+AGG | 0.628017 | 7.3:+200961 | MS.gene22764:CDS |
| GAAAGCGGCCAAGGCACTGG+AGG | 0.643194 | 7.3:+202803 | MS.gene22764:CDS |
| AGAAAGGAAACAAATGGCGA+GGG | 0.644627 | 7.3:+200962 | MS.gene22764:CDS |
| TCTAGCTTGGAATTCACCAA+AGG | 0.650621 | 7.3:-202397 | None:intergenic |
| CCTCGCTCAAACTAACCGAA+GGG | 0.662267 | 7.3:-202944 | None:intergenic |
| CCTTAGGATTCTGCATAGCG+AGG | 0.673579 | 7.3:-200281 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTATTAAAGAAATTATATT+AGG | - | chr7.3:201680-201699 | None:intergenic | 10.0% |
| !!! | AAATACTAAATTTCAATTTT+CGG | - | chr7.3:202553-202572 | None:intergenic | 10.0% |
| !!! | TATTATATTAACTTTTGTTT+TGG | + | chr7.3:201601-201620 | MS.gene22764:intron | 10.0% |
| !!! | TTATTTTAATTGATTTCTTT+TGG | + | chr7.3:202510-202529 | MS.gene22764:intron | 10.0% |
| !! | ACATTAAAAAGTAACAAAAA+TGG | - | chr7.3:200668-200687 | None:intergenic | 15.0% |
| !! | TATTTCATGAAAATATATAC+AGG | - | chr7.3:202747-202766 | None:intergenic | 15.0% |
| !!! | TATAAATTACATGTTTTAGA+TGG | + | chr7.3:201860-201879 | MS.gene22764:intron | 15.0% |
| !! | AAATTATATTAGGCACTAAT+TGG | - | chr7.3:201670-201689 | None:intergenic | 20.0% |
| !! | ATATAAAAGAATTTACACCT+CGG | - | chr7.3:201751-201770 | None:intergenic | 20.0% |
| !! | ATCAATAGTTATGTCATTAT+TGG | - | chr7.3:201334-201353 | None:intergenic | 20.0% |
| !! | CCTAGTATAATTAAAAAGTT+GGG | + | chr7.3:201717-201736 | MS.gene22764:intron | 20.0% |
| !! | GATTTAACAGAAAAATATGT+TGG | - | chr7.3:202165-202184 | None:intergenic | 20.0% |
| !! | TAAGATTCAAAGAAAGAAAA+GGG | + | chr7.3:200433-200452 | MS.gene22764:intron | 20.0% |
| !! | TAATTATACTAGGCATTTAT+TGG | - | chr7.3:201710-201729 | None:intergenic | 20.0% |
| !! | TAATTATGATGAAGCATAAT+CGG | - | chr7.3:200025-200044 | None:intergenic | 20.0% |
| !! | TCTTAAATCTTAAAACAATG+AGG | + | chr7.3:200351-200370 | MS.gene22764:intron | 20.0% |
| !! | TTAAGATTCAAAGAAAGAAA+AGG | + | chr7.3:200432-200451 | MS.gene22764:intron | 20.0% |
| !!! | ACATATTTTTCTGTTAAATC+AGG | + | chr7.3:202165-202184 | MS.gene22764:intron | 20.0% |
| !!! | AGAATTTCTAAAGCTAATAA+AGG | + | chr7.3:200100-200119 | MS.gene22764:CDS | 20.0% |
| !!! | AGATTAAATCATAAAAGTAC+AGG | + | chr7.3:202687-202706 | MS.gene22764:intron | 20.0% |
| !!! | ATGTGTTTCTAGTTAATAAT+GGG | - | chr7.3:201228-201247 | None:intergenic | 20.0% |
| !!! | TTTCTGTAGGATTTTATTTA+GGG | + | chr7.3:202102-202121 | MS.gene22764:intron | 20.0% |
| !!! | TTTTCTGTAGGATTTTATTT+AGG | + | chr7.3:202101-202120 | MS.gene22764:intron | 20.0% |
| ! | AAAAGTAACAAAAATGGTGA+TGG | - | chr7.3:200662-200681 | None:intergenic | 25.0% |
| ! | AAAATGAAGTTGACTAATCT+TGG | + | chr7.3:200608-200627 | MS.gene22764:CDS | 25.0% |
| ! | ACTTAGATCAATTAGAATAG+AGG | + | chr7.3:201558-201577 | MS.gene22764:intron | 25.0% |
| ! | AGGAAGAAAAAGAAAAGAAT+TGG | - | chr7.3:200559-200578 | None:intergenic | 25.0% |
| ! | ATGATCATAAAAAACCAAAG+AGG | - | chr7.3:202626-202645 | None:intergenic | 25.0% |
| ! | ATGTTAACATATACACTTAC+GGG | - | chr7.3:201068-201087 | None:intergenic | 25.0% |
| ! | CGTATTTGCAAATTAAAAAC+AGG | + | chr7.3:201486-201505 | MS.gene22764:intron | 25.0% |
| ! | GAAAGAATATCAACATAGAA+AGG | - | chr7.3:201635-201654 | None:intergenic | 25.0% |
| ! | GATGTTAACATATACACTTA+CGG | - | chr7.3:201069-201088 | None:intergenic | 25.0% |
| ! | GCCTAGTATAATTAAAAAGT+TGG | + | chr7.3:201716-201735 | MS.gene22764:intron | 25.0% |
| ! | TAAATTCAACAACAATCACT+TGG | + | chr7.3:199979-199998 | MS.gene22764:CDS | 25.0% |
| ! | TAATTAAAAAGTTGGGTCAA+AGG | + | chr7.3:201724-201743 | MS.gene22764:intron | 25.0% |
| ! | TATAAAAGAATTTACACCTC+GGG | - | chr7.3:201750-201769 | None:intergenic | 25.0% |
| ! | TTGTATAGACTATAAAAGAG+AGG | - | chr7.3:201790-201809 | None:intergenic | 25.0% |
| !! | AAGTGATTGTTGTTGAATTT+AGG | - | chr7.3:199980-199999 | None:intergenic | 25.0% |
| !! | ATCTATCTTTTGTGTATCAA+TGG | - | chr7.3:202913-202932 | None:intergenic | 25.0% |
| !! | CAACATCCATTTTCTATATA+GGG | - | chr7.3:201923-201942 | None:intergenic | 25.0% |
| !! | CTCTTTTATAGTCTATACAA+AGG | + | chr7.3:201790-201809 | MS.gene22764:intron | 25.0% |
| !! | TCAACATCCATTTTCTATAT+AGG | - | chr7.3:201924-201943 | None:intergenic | 25.0% |
| !!! | ATCAGAATCTCTTTTTGAAA+TGG | - | chr7.3:202296-202315 | None:intergenic | 25.0% |
| !!! | CATGTGTTTCTAGTTAATAA+TGG | - | chr7.3:201229-201248 | None:intergenic | 25.0% |
| !!! | CCCAACTTTTTAATTATACT+AGG | - | chr7.3:201720-201739 | None:intergenic | 25.0% |
| !!! | TCTTTGGTTTTTTATGATCA+TGG | + | chr7.3:202625-202644 | MS.gene22764:intron | 25.0% |
| !!! | TTTCCAGTTTTGTAAAAGAA+TGG | + | chr7.3:201373-201392 | MS.gene22764:intron | 25.0% |
| !!! | TTTTGAAATGGATTTCTTCT+TGG | - | chr7.3:202284-202303 | None:intergenic | 25.0% |
| AAGTTAGTAAGTAAGTTACC+AGG | - | chr7.3:200160-200179 | None:intergenic | 30.0% | |
| ACAAAAATGAAGATTAGTGC+TGG | + | chr7.3:200756-200775 | MS.gene22764:CDS | 30.0% | |
| AGATTGTGTTTCATCTTCAA+GGG | - | chr7.3:203255-203274 | None:intergenic | 30.0% | |
| AGTATCATCATTCTACTGAA+AGG | + | chr7.3:202221-202240 | MS.gene22764:CDS | 30.0% | |
| AGTTCAAAACCATTCAGAAA+TGG | + | chr7.3:202995-203014 | MS.gene22764:CDS | 30.0% | |
| ATAAAGAAGGAGATTGTATG+GGG | - | chr7.3:200718-200737 | None:intergenic | 30.0% | |
| CAAAACTTATCTAGACCATT+TGG | - | chr7.3:202011-202030 | None:intergenic | 30.0% | |
| CAGATTCTTGTAATTGCTAA+CGG | + | chr7.3:201440-201459 | MS.gene22764:intron | 30.0% | |
| CATAAAGAAGGAGATTGTAT+GGG | - | chr7.3:200719-200738 | None:intergenic | 30.0% | |
| CGACTATTCTGATATTCATT+AGG | - | chr7.3:201894-201913 | None:intergenic | 30.0% | |
| GAAAATGATAAGAACCTCTT+TGG | + | chr7.3:202609-202628 | MS.gene22764:intron | 30.0% | |
| GCAATTACAAGAATCTGTAT+AGG | - | chr7.3:201437-201456 | None:intergenic | 30.0% | |
| TACAGGATAATAGTTACAGT+TGG | - | chr7.3:202730-202749 | None:intergenic | 30.0% | |
| TAGATTGTGTTTCATCTTCA+AGG | - | chr7.3:203256-203275 | None:intergenic | 30.0% | |
| TATACTAGGCATTTATTGGA+AGG | - | chr7.3:201706-201725 | None:intergenic | 30.0% | |
| TGTTGAAGAAAGGAAACAAA+TGG | + | chr7.3:200956-200975 | MS.gene22764:CDS | 30.0% | |
| TTCAGTAGAATGATGATACT+TGG | - | chr7.3:202221-202240 | None:intergenic | 30.0% | |
| ! | CTTTTACAAAACTGGAAAAC+AGG | - | chr7.3:201371-201390 | None:intergenic | 30.0% |
| ! | GAGGTTCTTATCATTTTCTT+AGG | - | chr7.3:202607-202626 | None:intergenic | 30.0% |
| ! | TCACCATTCTTTTACAAAAC+TGG | - | chr7.3:201379-201398 | None:intergenic | 30.0% |
| ! | TGATTGTTGTTGAATTTAGG+TGG | - | chr7.3:199977-199996 | None:intergenic | 30.0% |
| !! | AAGAGAGAAAAGTACCAAAA+AGG | - | chr7.3:202137-202156 | None:intergenic | 30.0% |
| !! | AGAGAGAAAAGTACCAAAAA+GGG | - | chr7.3:202136-202155 | None:intergenic | 30.0% |
| !! | ATTTAATTGCAGAAGCATCT+AGG | + | chr7.3:200850-200869 | MS.gene22764:CDS | 30.0% |
| !! | GTTTCTAGTTAATAATGGGA+GGG | - | chr7.3:201224-201243 | None:intergenic | 30.0% |
| !! | TAACAAAAATGGTGATGGAA+AGG | - | chr7.3:200657-200676 | None:intergenic | 30.0% |
| !! | TACAAGTTCTCTGAAGATTT+TGG | + | chr7.3:203056-203075 | MS.gene22764:CDS | 30.0% |
| !! | TGTTTCTAGTTAATAATGGG+AGG | - | chr7.3:201225-201244 | None:intergenic | 30.0% |
| !!! | TTGGTTTTTTATGATCATGG+TGG | + | chr7.3:202628-202647 | MS.gene22764:intron | 30.0% |
| AAAATCAAAGTCCACAGACA+AGG | - | chr7.3:201964-201983 | None:intergenic | 35.0% | |
| AAAATCTGTTGCGTGAGATT+TGG | - | chr7.3:201530-201549 | None:intergenic | 35.0% | |
| AAGTTACACGTTACACCAAA+TGG | + | chr7.3:201993-202012 | MS.gene22764:intron | 35.0% | |
| AGAAACTTTGCAGAAGATCA+GGG | + | chr7.3:200248-200267 | MS.gene22764:intron | 35.0% | |
| AGAAGCTATTGCTGCAAAAT+GGG | + | chr7.3:201037-201056 | MS.gene22764:CDS | 35.0% | |
| ATAGTCTATACAAAGGTTGC+AGG | + | chr7.3:201797-201816 | MS.gene22764:intron | 35.0% | |
| ATCTGGCTATTCAAACTGAA+AGG | - | chr7.3:203152-203171 | None:intergenic | 35.0% | |
| ATGGAATTCCTATGAAACCT+TGG | + | chr7.3:200902-200921 | MS.gene22764:CDS | 35.0% | |
| ATTAGAGAAGACTGAGCAAT+GGG | - | chr7.3:202846-202865 | None:intergenic | 35.0% | |
| ATTCAACAACAATCACTTGG+AGG | + | chr7.3:199982-200001 | MS.gene22764:CDS | 35.0% | |
| ATTCACCAAAGGATCCTTAT+AGG | - | chr7.3:202389-202408 | None:intergenic | 35.0% | |
| ATTTGGCACAACAAAACATC+AGG | - | chr7.3:201513-201532 | None:intergenic | 35.0% | |
| CCATAAAGAAGGAGATTGTA+TGG | - | chr7.3:200720-200739 | None:intergenic | 35.0% | |
| CCATACAATCTCCTTCTTTA+TGG | + | chr7.3:200717-200736 | MS.gene22764:intron | 35.0% | |
| CCCTATTGCAACTAAAAAGT+GGG | + | chr7.3:203280-203299 | MS.gene22764:CDS | 35.0% | |
| CTAATAAAGGAAACACTCCA+TGG | + | chr7.3:200113-200132 | MS.gene22764:CDS | 35.0% | |
| GTTCTTTATCATCTCTAGCT+TGG | - | chr7.3:202413-202432 | None:intergenic | 35.0% | |
| TACTGTGCAATCCATAAAGA+AGG | - | chr7.3:200731-200750 | None:intergenic | 35.0% | |
| TAGTCTATACAAAGGTTGCA+GGG | + | chr7.3:201798-201817 | MS.gene22764:intron | 35.0% | |
| TATTAGAGAAGACTGAGCAA+TGG | - | chr7.3:202847-202866 | None:intergenic | 35.0% | |
| TTGTAATTGCTAACGGAAAC+AGG | + | chr7.3:201447-201466 | MS.gene22764:intron | 35.0% | |
| TTTGGCACAACAAAACATCA+GGG | - | chr7.3:201512-201531 | None:intergenic | 35.0% | |
| ! | AATTTTCCTTCTCTGTTCAG+GGG | - | chr7.3:201015-201034 | None:intergenic | 35.0% |
| ! | ACCAAGTAGTTTGAGTTTGA+GGG | + | chr7.3:200473-200492 | MS.gene22764:intron | 35.0% |
| ! | CAATTTTCCTTCTCTGTTCA+GGG | - | chr7.3:201016-201035 | None:intergenic | 35.0% |
| ! | CCATTTTCTATATAGGGCAA+CGG | - | chr7.3:201917-201936 | None:intergenic | 35.0% |
| ! | CTTGCAAGTTTCTTTTCTGT+AGG | + | chr7.3:202089-202108 | MS.gene22764:intron | 35.0% |
| ! | TACCAAGTAGTTTGAGTTTG+AGG | + | chr7.3:200472-200491 | MS.gene22764:intron | 35.0% |
| ! | TCATTGCGAAAGGATTTGTT+AGG | - | chr7.3:200579-200598 | None:intergenic | 35.0% |
| ! | TTTCTTTTTCTCAGCTGGAT+CGG | - | chr7.3:202358-202377 | None:intergenic | 35.0% |
| ! | TTTGGTACTTTTCTCTCTTC+AGG | + | chr7.3:202138-202157 | MS.gene22764:intron | 35.0% |
| ! | TTTTTCCAGGTACAACACTT+TGG | - | chr7.3:202034-202053 | None:intergenic | 35.0% |
| !! | GTACTTTGACAACTTTTTCC+AGG | - | chr7.3:202047-202066 | None:intergenic | 35.0% |
| !! | TGCAAAGTTTCTGGTGAAAT+AGG | - | chr7.3:200240-200259 | None:intergenic | 35.0% |
| !! | TTTCCCTTTGCTGATTTGAT+GGG | - | chr7.3:203187-203206 | None:intergenic | 35.0% |
| !!! | ACCCACTTTTTAGTTGCAAT+AGG | - | chr7.3:203284-203303 | None:intergenic | 35.0% |
| !!! | CCACTTTTTAGTTGCAATAG+GGG | - | chr7.3:203282-203301 | None:intergenic | 35.0% |
| !!! | CCCACTTTTTAGTTGCAATA+GGG | - | chr7.3:203283-203302 | None:intergenic | 35.0% |
| AAGAAAATCCCCTGCCTATA+AGG | + | chr7.3:202372-202391 | MS.gene22764:CDS | 40.0% | |
| AAGAAAGGAAACAAATGGCG+AGG | + | chr7.3:200961-200980 | MS.gene22764:CDS | 40.0% | |
| AATCCTTTCGCAATGAATGC+AGG | + | chr7.3:200583-200602 | MS.gene22764:intron | 40.0% | |
| ACAATGAGGACATGCAACAA+TGG | + | chr7.3:200365-200384 | MS.gene22764:intron | 40.0% | |
| AGAAAGGAAACAAATGGCGA+GGG | + | chr7.3:200962-200981 | MS.gene22764:CDS | 40.0% | |
| AGCTTCAGCTATAAGCTTTC+TGG | - | chr7.3:202874-202893 | None:intergenic | 40.0% | |
| AGGAGATTGTATGGGGTAAA+AGG | - | chr7.3:200711-200730 | None:intergenic | 40.0% | |
| AGTCTATACAAAGGTTGCAG+GGG | + | chr7.3:201799-201818 | MS.gene22764:intron | 40.0% | |
| ATGTTGTGCGTCCATTTACT+TGG | - | chr7.3:203022-203041 | None:intergenic | 40.0% | |
| CAGAAACTTTGCAGAAGATC+AGG | + | chr7.3:200247-200266 | MS.gene22764:intron | 40.0% | |
| CAGAAGCTATTGCTGCAAAA+TGG | + | chr7.3:201036-201055 | MS.gene22764:CDS | 40.0% | |
| CCCCTATTGCAACTAAAAAG+TGG | + | chr7.3:203279-203298 | MS.gene22764:CDS | 40.0% | |
| CCGTTGCCCTATATAGAAAA+TGG | + | chr7.3:201914-201933 | MS.gene22764:intron | 40.0% | |
| CTAGAAACACATGCAGTTTC+AGG | + | chr7.3:201236-201255 | MS.gene22764:intron | 40.0% | |
| CTGAAAGGAAACCTAGAACA+AGG | + | chr7.3:202236-202255 | MS.gene22764:CDS | 40.0% | |
| CTGATCTTCTGCAAAGTTTC+TGG | - | chr7.3:200249-200268 | None:intergenic | 40.0% | |
| CTGGATTCTCTTGCTTCTAA+AGG | + | chr7.3:201262-201281 | MS.gene22764:intron | 40.0% | |
| CTGTTCATCCAAGGTTTCAT+AGG | - | chr7.3:200913-200932 | None:intergenic | 40.0% | |
| GAGAGTTGTGCACTATAACT+GGG | - | chr7.3:202262-202281 | None:intergenic | 40.0% | |
| GGAGATTGTATGGGGTAAAA+GGG | - | chr7.3:200710-200729 | None:intergenic | 40.0% | |
| GGTTGCTCAATGTTGAAGAA+AGG | + | chr7.3:200946-200965 | MS.gene22764:CDS | 40.0% | |
| TCAGAAATGGCCCAAGTAAA+TGG | + | chr7.3:203008-203027 | MS.gene22764:CDS | 40.0% | |
| TCAGAGAACTTGTAGAAGCT+TGG | - | chr7.3:203050-203069 | None:intergenic | 40.0% | |
| TGAGAAAGCTATGGGAAATG+AGG | + | chr7.3:200781-200800 | MS.gene22764:CDS | 40.0% | |
| TGATGAAGCATAATCGGATG+AGG | - | chr7.3:200019-200038 | None:intergenic | 40.0% | |
| TGCTTACATGACATCACCTT+AGG | - | chr7.3:200300-200319 | None:intergenic | 40.0% | |
| TGCTTTCTTCCTTTGTTCCA+TGG | - | chr7.3:200133-200152 | None:intergenic | 40.0% | |
| TGTTGTGCGTCCATTTACTT+GGG | - | chr7.3:203021-203040 | None:intergenic | 40.0% | |
| TTACTTGGGCCATTTCTGAA+TGG | - | chr7.3:203007-203026 | None:intergenic | 40.0% | |
| TTGTATGGCTTGAGTTTGTC+TGG | - | chr7.3:202464-202483 | None:intergenic | 40.0% | |
| ! | AAGAAGCACATCCATTGGTT+AGG | - | chr7.3:203127-203146 | None:intergenic | 40.0% |
| ! | AGGTAAAGAAGCACATCCAT+TGG | - | chr7.3:203132-203151 | None:intergenic | 40.0% |
| ! | CAAGTAGTTTGAGTTTGAGG+GGG | + | chr7.3:200475-200494 | MS.gene22764:intron | 40.0% |
| ! | CCAAGTAGTTTGAGTTTGAG+GGG | + | chr7.3:200474-200493 | MS.gene22764:intron | 40.0% |
| ! | GCAATTTTCCTTCTCTGTTC+AGG | - | chr7.3:201017-201036 | None:intergenic | 40.0% |
| ! | GGGATTTTCTTTTTCTCAGC+TGG | - | chr7.3:202363-202382 | None:intergenic | 40.0% |
| ! | TCTAGCTTGGAATTCACCAA+AGG | - | chr7.3:202400-202419 | None:intergenic | 40.0% |
| !! | AGATTTTGGTGAACTTTCCC+TGG | + | chr7.3:203070-203089 | MS.gene22764:CDS | 40.0% |
| !! | CTATAAAAGAGAGGAGTGCT+AGG | - | chr7.3:201781-201800 | None:intergenic | 40.0% |
| !! | CTGGATCGGCTTAACAATTT+TGG | - | chr7.3:202344-202363 | None:intergenic | 40.0% |
| !! | GATCGGCTTAACAATTTTGG+AGG | - | chr7.3:202341-202360 | None:intergenic | 40.0% |
| !! | GTTTCCCTTTGCTGATTTGA+TGG | - | chr7.3:203188-203207 | None:intergenic | 40.0% |
| !!! | TAGGGTTGTTTCTCCCTTTT+TGG | + | chr7.3:202120-202139 | MS.gene22764:intron | 40.0% |
| !!! | TTTTGCCAAAGTGTTGTACC+TGG | + | chr7.3:202026-202045 | MS.gene22764:intron | 40.0% |
| AACTTCTCGCTCTCATCAAG+TGG | - | chr7.3:200070-200089 | None:intergenic | 45.0% | |
| ACCAAAGGATCCTTATAGGC+AGG | - | chr7.3:202385-202404 | None:intergenic | 45.0% | |
| ACTGCCCATCAAATCAGCAA+AGG | + | chr7.3:203180-203199 | MS.gene22764:CDS | 45.0% | |
| AGATGACTGTAGTGTCCCTT+CGG | + | chr7.3:202929-202948 | MS.gene22764:CDS | 45.0% | |
| AGTGCGGTCAGAATAGTCAA+AGG | + | chr7.3:201830-201849 | MS.gene22764:intron | 45.0% | |
| ATGAACAGCTTAAGCAGGAG+TGG | + | chr7.3:200925-200944 | MS.gene22764:CDS | 45.0% | |
| ATGGGCAGTCTTGGTTTATC+TGG | - | chr7.3:203169-203188 | None:intergenic | 45.0% | |
| CAAAGGATCCTTATAGGCAG+GGG | - | chr7.3:202383-202402 | None:intergenic | 45.0% | |
| CCAAAGGATCCTTATAGGCA+GGG | - | chr7.3:202384-202403 | None:intergenic | 45.0% | |
| CCAGAACTTCACCTAACCAA+TGG | + | chr7.3:203113-203132 | MS.gene22764:CDS | 45.0% | |
| CCCCTCAAACTCAAACTACT+TGG | - | chr7.3:200477-200496 | None:intergenic | 45.0% | |
| CTAGGCATTTATTGGAAGGC+AGG | - | chr7.3:201702-201721 | None:intergenic | 45.0% | |
| CTCAAGCCATACAACAAGCA+AGG | + | chr7.3:202470-202489 | MS.gene22764:CDS | 45.0% | |
| CTGCCCATCAAATCAGCAAA+GGG | + | chr7.3:203181-203200 | MS.gene22764:CDS | 45.0% | |
| CTGCTTAAGCTGTTCATCCA+AGG | - | chr7.3:200922-200941 | None:intergenic | 45.0% | |
| CTTGGATGAACAGCTTAAGC+AGG | + | chr7.3:200920-200939 | MS.gene22764:CDS | 45.0% | |
| GATTGCTGAAGCTGAGAAAG+CGG | + | chr7.3:202788-202807 | MS.gene22764:CDS | 45.0% | |
| GGAAACACTCCATGGAACAA+AGG | + | chr7.3:200121-200140 | MS.gene22764:CDS | 45.0% | |
| GGAGAGTTGTGCACTATAAC+TGG | - | chr7.3:202263-202282 | None:intergenic | 45.0% | |
| GTCTATACAAAGGTTGCAGG+GGG | + | chr7.3:201800-201819 | MS.gene22764:intron | 45.0% | |
| TAGTTTGAGCGAGGTCAATC+AGG | + | chr7.3:202953-202972 | MS.gene22764:CDS | 45.0% | |
| TCAAAGTCCACAGACAAGGA+TGG | - | chr7.3:201960-201979 | None:intergenic | 45.0% | |
| TCAGCAAAGGGAAACAGAAC+AGG | + | chr7.3:203193-203212 | MS.gene22764:CDS | 45.0% | |
| TGACCTGCATTCATTGCGAA+AGG | - | chr7.3:200589-200608 | None:intergenic | 45.0% | |
| TGCTGGAGTGAGAAAGCTAT+GGG | + | chr7.3:200773-200792 | MS.gene22764:CDS | 45.0% | |
| TGTGTTTCCATCCTTGTCTG+TGG | + | chr7.3:201950-201969 | MS.gene22764:intron | 45.0% | |
| TTGAGTTTGTCTGGTATCCG+CGG | - | chr7.3:202455-202474 | None:intergenic | 45.0% | |
| TTGCAGAGCAGACTCTTTCA+CGG | - | chr7.3:202195-202214 | None:intergenic | 45.0% | |
| ! | AAAGGAAGAAAGCACAGTCC+TGG | + | chr7.3:200139-200158 | MS.gene22764:CDS | 45.0% |
| ! | CACATGCAGTTTCAGGTAAC+TGG | + | chr7.3:201243-201262 | MS.gene22764:intron | 45.0% |
| ! | CCATTGGTTAGGTGAAGTTC+TGG | - | chr7.3:203116-203135 | None:intergenic | 45.0% |
| ! | GCAACTAAAAAGTGGGTTCG+CGG | + | chr7.3:203287-203306 | MS.gene22764:CDS | 45.0% |
| !! | AGTTCTGGAACGCCATTAAC+TGG | - | chr7.3:203101-203120 | None:intergenic | 45.0% |
| !! | ATGGTGGATGCGATGAACAT+TGG | + | chr7.3:202644-202663 | MS.gene22764:intron | 45.0% |
| !! | ATTGCAGAAGCATCTAGGCA+AGG | + | chr7.3:200855-200874 | MS.gene22764:CDS | 45.0% |
| !! | CTATAACTGGGCCTTGTTCT+AGG | - | chr7.3:202250-202269 | None:intergenic | 45.0% |
| !! | GGTCTACCTTGCTTGTTGTA+TGG | - | chr7.3:202479-202498 | None:intergenic | 45.0% |
| !! | AATTAAAATAAGTATTAAAA+TGG | - | chr7.3:202501-202520 | None:intergenic | 5.0% |
| !! | ATTAAAATAAGTATTAAAAT+GGG | - | chr7.3:202500-202519 | None:intergenic | 5.0% |
| AAGCTATGGGAAATGAGGCG+TGG | + | chr7.3:200786-200805 | MS.gene22764:CDS | 50.0% | |
| ACCTCGCTCAAACTAACCGA+AGG | - | chr7.3:202948-202967 | None:intergenic | 50.0% | |
| AGCTATGGGAAATGAGGCGT+GGG | + | chr7.3:200787-200806 | MS.gene22764:CDS | 50.0% | |
| CCCTGCCTATAAGGATCCTT+TGG | + | chr7.3:202381-202400 | MS.gene22764:CDS | 50.0% | |
| CCTCGCTATGCAGAATCCTA+AGG | + | chr7.3:200281-200300 | MS.gene22764:CDS | 50.0% | |
| CCTCGCTCAAACTAACCGAA+GGG | - | chr7.3:202947-202966 | None:intergenic | 50.0% | |
| CCTTAGGATTCTGCATAGCG+AGG | - | chr7.3:200284-200303 | None:intergenic | 50.0% | |
| CTTCTCTGTTCAGGGGACTT+GGG | - | chr7.3:201008-201027 | None:intergenic | 50.0% | |
| GTGCTGGAGTGAGAAAGCTA+TGG | + | chr7.3:200772-200791 | MS.gene22764:CDS | 50.0% | |
| TATACAAAGGTTGCAGGGGG+AGG | + | chr7.3:201803-201822 | MS.gene22764:intron | 50.0% | |
| TCCCTGGAGAGACCAGTTAA+TGG | + | chr7.3:203086-203105 | MS.gene22764:CDS | 50.0% | |
| TTGGGTGCTCTGTTGCTAAC+TGG | - | chr7.3:200990-201009 | None:intergenic | 50.0% | |
| TTGGTCAGGAAGAGCTGCAA+TGG | + | chr7.3:200883-200902 | MS.gene22764:CDS | 50.0% | |
| ! | CTAAAAAGTGGGTTCGCGGA+AGG | + | chr7.3:203291-203310 | MS.gene22764:CDS | 50.0% |
| ! | GCATCTAGGCAAGGCTTTGT+TGG | + | chr7.3:200864-200883 | MS.gene22764:CDS | 50.0% |
| ! | GCCATTAACTGGTCTCTCCA+GGG | - | chr7.3:203090-203109 | None:intergenic | 50.0% |
| !! | AGGAGAGTTGCTGCTTTGAG+TGG | + | chr7.3:200823-200842 | MS.gene22764:CDS | 50.0% |
| !! | GCTGATTTGATGGGCAGTCT+TGG | - | chr7.3:203178-203197 | None:intergenic | 50.0% |
| !! | TAGGCAAGGCTTTGTTGGTC+AGG | + | chr7.3:200869-200888 | MS.gene22764:CDS | 50.0% |
| AAAGTTGGGTCAAAGGCCCG+AGG | + | chr7.3:201731-201750 | MS.gene22764:intron | 55.0% | |
| AATGAGGCGTGGGAGGAAGA+TGG | + | chr7.3:200797-200816 | MS.gene22764:CDS | 55.0% | |
| CAGAGCACAAAGAGCTTCCG+CGG | + | chr7.3:202435-202454 | MS.gene22764:CDS | 55.0% | |
| CCAAGTCCCCTGAACAGAGA+AGG | + | chr7.3:201006-201025 | MS.gene22764:CDS | 55.0% | |
| CCTTCTCTGTTCAGGGGACT+TGG | - | chr7.3:201009-201028 | None:intergenic | 55.0% | |
| TATGGGAAATGAGGCGTGGG+AGG | + | chr7.3:200790-200809 | MS.gene22764:CDS | 55.0% | |
| TGAAGCTGAGAAAGCGGCCA+AGG | + | chr7.3:202794-202813 | MS.gene22764:CDS | 55.0% | |
| ! | CGCCATTAACTGGTCTCTCC+AGG | - | chr7.3:203091-203110 | None:intergenic | 55.0% |
| !! | CCCTTCGGTTAGTTTGAGCG+AGG | + | chr7.3:202944-202963 | MS.gene22764:CDS | 55.0% |
| TGAGAAAGCGGCCAAGGCAC+TGG | + | chr7.3:202800-202819 | MS.gene22764:CDS | 60.0% | |
| TGCAGGGGGAGGATGAAGTG+CGG | + | chr7.3:201814-201833 | MS.gene22764:intron | 60.0% | |
| !! | CAAGGCACTGGAGGTTGCTG+CGG | + | chr7.3:202812-202831 | MS.gene22764:CDS | 60.0% |
| CGCAGCAACCTCCAGTGCCT+TGG | - | chr7.3:202814-202833 | None:intergenic | 65.0% | |
| GCGTGGGAGGAAGATGGTGC+AGG | + | chr7.3:200803-200822 | MS.gene22764:CDS | 65.0% | |
| !! | GAAAGCGGCCAAGGCACTGG+AGG | + | chr7.3:202803-202822 | MS.gene22764:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 199962 | 203343 | 199962 | ID=MS.gene22764 |
| chr7.3 | mRNA | 199962 | 203343 | 199962 | ID=MS.gene22764.t1;Parent=MS.gene22764 |
| chr7.3 | exon | 199962 | 200160 | 199962 | ID=MS.gene22764.t1.exon1;Parent=MS.gene22764.t1 |
| chr7.3 | CDS | 199962 | 200160 | 199962 | ID=cds.MS.gene22764.t1;Parent=MS.gene22764.t1 |
| chr7.3 | exon | 200250 | 200302 | 200250 | ID=MS.gene22764.t1.exon2;Parent=MS.gene22764.t1 |
| chr7.3 | CDS | 200250 | 200302 | 200250 | ID=cds.MS.gene22764.t1;Parent=MS.gene22764.t1 |
| chr7.3 | exon | 200605 | 200642 | 200605 | ID=MS.gene22764.t1.exon3;Parent=MS.gene22764.t1 |
| chr7.3 | CDS | 200605 | 200642 | 200605 | ID=cds.MS.gene22764.t1;Parent=MS.gene22764.t1 |
| chr7.3 | exon | 200749 | 201067 | 200749 | ID=MS.gene22764.t1.exon4;Parent=MS.gene22764.t1 |
| chr7.3 | CDS | 200749 | 201067 | 200749 | ID=cds.MS.gene22764.t1;Parent=MS.gene22764.t1 |
| chr7.3 | exon | 202187 | 202491 | 202187 | ID=MS.gene22764.t1.exon5;Parent=MS.gene22764.t1 |
| chr7.3 | CDS | 202187 | 202491 | 202187 | ID=cds.MS.gene22764.t1;Parent=MS.gene22764.t1 |
| chr7.3 | exon | 202782 | 203343 | 202782 | ID=MS.gene22764.t1.exon6;Parent=MS.gene22764.t1 |
| chr7.3 | CDS | 202782 | 203343 | 202782 | ID=cds.MS.gene22764.t1;Parent=MS.gene22764.t1 |
| Gene Sequence |
| Protein sequence |
