Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46337.t1 | XP_003608618.2 | 93.2 | 296 | 19 | 1 | 1 | 295 | 1 | 296 | 1.80E-107 | 399.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46337.t1 | O23620 | 83.9 | 211 | 25 | 2 | 85 | 295 | 91 | 292 | 3.7e-72 | 273.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46337.t1 | G7JGG2 | 93.2 | 296 | 19 | 1 | 1 | 295 | 1 | 296 | 1.3e-107 | 399.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene46337 | -0.827117 | 1.87E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene46337 | -0.814222 | 1.72E-51 | -1.69E-46 |
| MS.gene049222 | MS.gene46337 | -0.847736 | 9.57E-60 | -1.69E-46 |
| MS.gene049265 | MS.gene46337 | 0.823971 | 1.04E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene46337 | -0.810815 | 9.56E-51 | -1.69E-46 |
| MS.gene049320 | MS.gene46337 | -0.814325 | 1.63E-51 | -1.69E-46 |
| MS.gene049549 | MS.gene46337 | 0.809298 | 2.03E-50 | -1.69E-46 |
| MS.gene049611 | MS.gene46337 | 0.821098 | 4.84E-53 | -1.69E-46 |
| MS.gene049633 | MS.gene46337 | -0.815494 | 8.98E-52 | -1.69E-46 |
| MS.gene049634 | MS.gene46337 | 0.851281 | 9.83E-61 | -1.69E-46 |
| MS.gene050096 | MS.gene46337 | 0.814987 | 1.16E-51 | -1.69E-46 |
| MS.gene050163 | MS.gene46337 | -0.816069 | 6.69E-52 | -1.69E-46 |
| MS.gene050165 | MS.gene46337 | -0.818977 | 1.48E-52 | -1.69E-46 |
| MS.gene050170 | MS.gene46337 | -0.801366 | 9.31E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene46337 | -0.819345 | 1.22E-52 | -1.69E-46 |
| MS.gene050380 | MS.gene46337 | 0.810995 | 8.74E-51 | -1.69E-46 |
| MS.gene050381 | MS.gene46337 | 0.832546 | 8.89E-56 | -1.69E-46 |
| MS.gene050444 | MS.gene46337 | -0.804796 | 1.82E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene46337 | -0.829055 | 6.38E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene46337 | -0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene050612 | MS.gene46337 | -0.84082 | 6.91E-58 | -1.69E-46 |
| MS.gene050647 | MS.gene46337 | 0.803067 | 4.16E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene46337 | -0.82802 | 1.13E-54 | -1.69E-46 |
| MS.gene050699 | MS.gene46337 | -0.817883 | 2.62E-52 | -1.69E-46 |
| MS.gene050747 | MS.gene46337 | -0.812438 | 4.24E-51 | -1.69E-46 |
| MS.gene050772 | MS.gene46337 | -0.807565 | 4.75E-50 | -1.69E-46 |
| MS.gene05079 | MS.gene46337 | 0.821934 | 3.10E-53 | -1.69E-46 |
| MS.gene050809 | MS.gene46337 | 0.8331 | 6.48E-56 | -1.69E-46 |
| MS.gene05080 | MS.gene46337 | -0.822865 | 1.88E-53 | -1.69E-46 |
| MS.gene050868 | MS.gene46337 | -0.819126 | 1.37E-52 | -1.69E-46 |
| MS.gene050871 | MS.gene46337 | -0.815322 | 9.81E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene46337 | -0.802901 | 4.50E-49 | -1.69E-46 |
| MS.gene05104 | MS.gene46337 | 0.813624 | 2.33E-51 | -1.69E-46 |
| MS.gene051138 | MS.gene46337 | 0.833986 | 3.89E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene46337 | 0.842288 | 2.83E-58 | -1.69E-46 |
| MS.gene051366 | MS.gene46337 | 0.84873 | 5.09E-60 | -1.69E-46 |
| MS.gene051367 | MS.gene46337 | 0.813949 | 1.98E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene46337 | -0.810554 | 1.09E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene46337 | -0.807459 | 5.00E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene46337 | 0.815336 | 9.74E-52 | -1.69E-46 |
| MS.gene05234 | MS.gene46337 | 0.811492 | 6.81E-51 | -1.69E-46 |
| MS.gene05240 | MS.gene46337 | 0.837229 | 5.88E-57 | -1.69E-46 |
| MS.gene05244 | MS.gene46337 | 0.817708 | 2.87E-52 | -1.69E-46 |
| MS.gene052606 | MS.gene46337 | 0.83911 | 1.93E-57 | -1.69E-46 |
| MS.gene052615 | MS.gene46337 | -0.820552 | 6.46E-53 | -1.69E-46 |
| MS.gene052966 | MS.gene46337 | -0.807902 | 4.03E-50 | -1.69E-46 |
| MS.gene053203 | MS.gene46337 | -0.811227 | 7.78E-51 | -1.69E-46 |
| MS.gene053406 | MS.gene46337 | 0.800286 | 1.55E-48 | -1.69E-46 |
| MS.gene053420 | MS.gene46337 | 0.84486 | 5.82E-59 | -1.69E-46 |
| MS.gene053421 | MS.gene46337 | 0.821532 | 3.84E-53 | -1.69E-46 |
| MS.gene053488 | MS.gene46337 | 0.804717 | 1.89E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene46337 | 0.814276 | 1.67E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene46337 | -0.815517 | 8.88E-52 | -1.69E-46 |
| MS.gene053776 | MS.gene46337 | 0.80778 | 4.28E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene46337 | -0.803452 | 3.46E-49 | -1.69E-46 |
| MS.gene053887 | MS.gene46337 | 0.80041 | 1.46E-48 | -1.69E-46 |
| MS.gene053916 | MS.gene46337 | -0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene054146 | MS.gene46337 | 0.80822 | 3.45E-50 | -1.69E-46 |
| MS.gene054290 | MS.gene46337 | 0.84421 | 8.70E-59 | -1.69E-46 |
| MS.gene054595 | MS.gene46337 | -0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene054642 | MS.gene46337 | -0.806836 | 6.78E-50 | -1.69E-46 |
| MS.gene054706 | MS.gene46337 | 0.843569 | 1.29E-58 | -1.69E-46 |
| MS.gene054707 | MS.gene46337 | 0.820367 | 7.12E-53 | -1.69E-46 |
| MS.gene05470 | MS.gene46337 | -0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene054742 | MS.gene46337 | 0.812202 | 4.77E-51 | -1.69E-46 |
| MS.gene054884 | MS.gene46337 | 0.800304 | 1.53E-48 | -1.69E-46 |
| MS.gene054954 | MS.gene46337 | -0.804489 | 2.11E-49 | -1.69E-46 |
| MS.gene054959 | MS.gene46337 | 0.800354 | 1.50E-48 | -1.69E-46 |
| MS.gene055124 | MS.gene46337 | 0.833961 | 3.95E-56 | -1.69E-46 |
| MS.gene055154 | MS.gene46337 | 0.850815 | 1.33E-60 | -1.69E-46 |
| MS.gene055202 | MS.gene46337 | 0.828844 | 7.17E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene46337 | -0.825067 | 5.74E-54 | -1.69E-46 |
| MS.gene055362 | MS.gene46337 | -0.814493 | 1.50E-51 | -1.69E-46 |
| MS.gene055502 | MS.gene46337 | -0.840553 | 8.11E-58 | -1.69E-46 |
| MS.gene055577 | MS.gene46337 | -0.833322 | 5.70E-56 | -1.69E-46 |
| MS.gene055748 | MS.gene46337 | -0.827709 | 1.35E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene46337 | -0.814998 | 1.16E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene46337 | -0.821225 | 4.52E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene46337 | -0.82553 | 4.46E-54 | -1.69E-46 |
| MS.gene056218 | MS.gene46337 | 0.810871 | 9.29E-51 | -1.69E-46 |
| MS.gene056224 | MS.gene46337 | 0.816715 | 4.79E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene46337 | -0.828085 | 1.09E-54 | -1.69E-46 |
| MS.gene056590 | MS.gene46337 | 0.849977 | 2.29E-60 | -1.69E-46 |
| MS.gene056591 | MS.gene46337 | 0.848228 | 7.01E-60 | -1.69E-46 |
| MS.gene056657 | MS.gene46337 | -0.81764 | 2.97E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene46337 | -0.800685 | 1.28E-48 | -1.69E-46 |
| MS.gene056856 | MS.gene46337 | 0.857582 | 1.48E-62 | -1.69E-46 |
| MS.gene057544 | MS.gene46337 | 0.831725 | 1.42E-55 | -1.69E-46 |
| MS.gene057549 | MS.gene46337 | 0.800765 | 1.24E-48 | -1.69E-46 |
| MS.gene058068 | MS.gene46337 | 0.812161 | 4.87E-51 | -1.69E-46 |
| MS.gene058093 | MS.gene46337 | 0.820644 | 6.15E-53 | -1.69E-46 |
| MS.gene058099 | MS.gene46337 | 0.81749 | 3.21E-52 | -1.69E-46 |
| MS.gene058109 | MS.gene46337 | 0.801105 | 1.05E-48 | -1.69E-46 |
| MS.gene058117 | MS.gene46337 | 0.801586 | 8.40E-49 | -1.69E-46 |
| MS.gene058158 | MS.gene46337 | 0.808509 | 2.99E-50 | -1.69E-46 |
| MS.gene058171 | MS.gene46337 | 0.817909 | 2.58E-52 | -1.69E-46 |
| MS.gene058173 | MS.gene46337 | 0.80258 | 5.24E-49 | -1.69E-46 |
| MS.gene058175 | MS.gene46337 | 0.817132 | 3.86E-52 | -1.69E-46 |
| MS.gene058268 | MS.gene46337 | 0.800902 | 1.16E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene46337 | 0.815123 | 1.09E-51 | -1.69E-46 |
| MS.gene05837 | MS.gene46337 | -0.812226 | 4.72E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene46337 | -0.818642 | 1.76E-52 | -1.69E-46 |
| MS.gene058544 | MS.gene46337 | -0.822914 | 1.84E-53 | -1.69E-46 |
| MS.gene058603 | MS.gene46337 | 0.856871 | 2.40E-62 | -1.69E-46 |
| MS.gene058773 | MS.gene46337 | -0.80808 | 3.69E-50 | -1.69E-46 |
| MS.gene058838 | MS.gene46337 | -0.828913 | 6.90E-55 | -1.69E-46 |
| MS.gene059022 | MS.gene46337 | -0.821405 | 4.11E-53 | -1.69E-46 |
| MS.gene059023 | MS.gene46337 | -0.816847 | 4.48E-52 | -1.69E-46 |
| MS.gene059045 | MS.gene46337 | 0.801015 | 1.10E-48 | -1.69E-46 |
| MS.gene059315 | MS.gene46337 | 0.801845 | 7.43E-49 | -1.69E-46 |
| MS.gene059526 | MS.gene46337 | 0.814897 | 1.22E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene46337 | -0.833948 | 3.98E-56 | -1.69E-46 |
| MS.gene059718 | MS.gene46337 | -0.821526 | 3.85E-53 | -1.69E-46 |
| MS.gene059756 | MS.gene46337 | -0.804291 | 2.32E-49 | -1.69E-46 |
| MS.gene059801 | MS.gene46337 | -0.804243 | 2.37E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene46337 | -0.809594 | 1.75E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene46337 | -0.808741 | 2.67E-50 | -1.69E-46 |
| MS.gene059953 | MS.gene46337 | 0.838499 | 2.77E-57 | -1.69E-46 |
| MS.gene059955 | MS.gene46337 | 0.823709 | 1.20E-53 | -1.69E-46 |
| MS.gene060405 | MS.gene46337 | 0.806448 | 8.19E-50 | -1.69E-46 |
| MS.gene060762 | MS.gene46337 | -0.83559 | 1.54E-56 | -1.69E-46 |
| MS.gene06077 | MS.gene46337 | -0.817431 | 3.31E-52 | -1.69E-46 |
| MS.gene060823 | MS.gene46337 | 0.814615 | 1.41E-51 | -1.69E-46 |
| MS.gene060982 | MS.gene46337 | -0.811448 | 6.96E-51 | -1.69E-46 |
| MS.gene061044 | MS.gene46337 | 0.801326 | 9.49E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene46337 | -0.805095 | 1.57E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46337.t1 | MTR_4g098450 | 98.986 | 296 | 2 | 1 | 1 | 295 | 1 | 296 | 0.0 | 583 |
| MS.gene46337.t1 | MTR_7g080980 | 66.890 | 299 | 65 | 7 | 1 | 295 | 1 | 269 | 1.29e-99 | 293 |
| MS.gene46337.t1 | MTR_8g036060 | 52.055 | 292 | 122 | 3 | 19 | 295 | 20 | 308 | 5.54e-72 | 224 |
| MS.gene46337.t1 | MTR_5g091630 | 64.848 | 165 | 57 | 1 | 66 | 230 | 38 | 201 | 1.45e-65 | 206 |
| MS.gene46337.t1 | MTR_1g073860 | 59.296 | 199 | 72 | 2 | 72 | 261 | 90 | 288 | 7.50e-65 | 206 |
| MS.gene46337.t1 | MTR_1g044155 | 74.000 | 150 | 39 | 0 | 76 | 225 | 126 | 275 | 3.01e-64 | 206 |
| MS.gene46337.t1 | MTR_5g011520 | 72.152 | 158 | 44 | 0 | 72 | 229 | 96 | 253 | 4.14e-63 | 202 |
| MS.gene46337.t1 | MTR_3g068035 | 72.483 | 149 | 41 | 0 | 81 | 229 | 84 | 232 | 3.83e-62 | 199 |
| MS.gene46337.t1 | MTR_1g079810 | 63.095 | 168 | 62 | 0 | 76 | 243 | 74 | 241 | 3.93e-61 | 196 |
| MS.gene46337.t1 | MTR_3g100470 | 45.188 | 239 | 103 | 7 | 20 | 252 | 30 | 246 | 3.64e-56 | 183 |
| MS.gene46337.t1 | MTR_5g080580 | 64.828 | 145 | 51 | 0 | 81 | 225 | 94 | 238 | 1.44e-49 | 167 |
| MS.gene46337.t1 | MTR_5g066020 | 43.868 | 212 | 103 | 5 | 23 | 228 | 7 | 208 | 1.07e-43 | 150 |
| MS.gene46337.t1 | MTR_5g089600 | 37.584 | 149 | 82 | 2 | 76 | 213 | 77 | 225 | 1.93e-27 | 107 |
| MS.gene46337.t1 | MTR_5g010330 | 39.041 | 146 | 82 | 4 | 76 | 215 | 104 | 248 | 1.33e-23 | 98.6 |
| MS.gene46337.t1 | MTR_4g057487 | 34.177 | 158 | 94 | 3 | 76 | 223 | 17 | 174 | 1.45e-22 | 94.0 |
| MS.gene46337.t1 | MTR_4g057525 | 31.282 | 195 | 124 | 3 | 76 | 260 | 36 | 230 | 2.77e-22 | 93.6 |
| MS.gene46337.t1 | MTR_1g061530 | 39.007 | 141 | 82 | 2 | 106 | 242 | 144 | 284 | 4.25e-22 | 95.1 |
| MS.gene46337.t1 | MTR_5g089700 | 34.000 | 150 | 89 | 2 | 75 | 215 | 74 | 222 | 6.80e-22 | 92.0 |
| MS.gene46337.t1 | MTR_1g053685 | 32.335 | 167 | 104 | 2 | 76 | 233 | 85 | 251 | 1.05e-21 | 92.8 |
| MS.gene46337.t1 | MTR_6g061670 | 43.220 | 118 | 60 | 2 | 103 | 215 | 130 | 245 | 3.08e-21 | 92.0 |
| MS.gene46337.t1 | MTR_6g061670 | 43.220 | 118 | 60 | 2 | 103 | 215 | 125 | 240 | 4.35e-21 | 91.7 |
| MS.gene46337.t1 | MTR_1g032910 | 34.375 | 160 | 93 | 3 | 76 | 223 | 101 | 260 | 2.55e-20 | 89.0 |
| MS.gene46337.t1 | MTR_1g079780 | 38.261 | 115 | 70 | 1 | 103 | 216 | 109 | 223 | 5.14e-20 | 88.6 |
| MS.gene46337.t1 | MTR_5g089090 | 34.146 | 164 | 92 | 2 | 70 | 222 | 22 | 180 | 1.12e-19 | 85.5 |
| MS.gene46337.t1 | MTR_1g076710 | 39.130 | 161 | 74 | 5 | 76 | 215 | 91 | 248 | 6.00e-19 | 85.9 |
| MS.gene46337.t1 | MTR_4g098460 | 36.538 | 156 | 82 | 4 | 68 | 215 | 49 | 195 | 6.02e-19 | 85.1 |
| MS.gene46337.t1 | MTR_8g036160 | 45.614 | 114 | 58 | 1 | 106 | 215 | 145 | 258 | 1.52e-18 | 85.1 |
| MS.gene46337.t1 | MTR_1g073870 | 41.333 | 150 | 41 | 4 | 76 | 225 | 52 | 154 | 2.04e-18 | 82.4 |
| MS.gene46337.t1 | MTR_7g077120 | 38.514 | 148 | 81 | 3 | 76 | 215 | 127 | 272 | 7.24e-18 | 82.8 |
| MS.gene46337.t1 | MTR_4g098460 | 36.250 | 160 | 82 | 4 | 68 | 215 | 49 | 200 | 1.61e-17 | 81.3 |
| MS.gene46337.t1 | MTR_8g031100 | 40.127 | 157 | 86 | 3 | 67 | 215 | 114 | 270 | 3.24e-17 | 80.9 |
| MS.gene46337.t1 | MTR_7g074935 | 50.746 | 67 | 33 | 0 | 106 | 172 | 130 | 196 | 4.92e-17 | 80.5 |
| MS.gene46337.t1 | MTR_8g098390 | 34.307 | 137 | 86 | 3 | 95 | 228 | 158 | 293 | 6.75e-17 | 80.1 |
| MS.gene46337.t1 | MTR_7g116320 | 39.823 | 113 | 68 | 0 | 103 | 215 | 143 | 255 | 1.05e-16 | 79.7 |
| MS.gene46337.t1 | MTR_4g055813 | 36.641 | 131 | 81 | 2 | 102 | 230 | 18 | 148 | 3.01e-16 | 77.4 |
| MS.gene46337.t1 | MTR_7g116320 | 39.200 | 125 | 72 | 1 | 103 | 223 | 143 | 267 | 3.08e-16 | 77.4 |
| MS.gene46337.t1 | MTR_4g055803 | 39.167 | 120 | 67 | 2 | 102 | 215 | 124 | 243 | 3.26e-16 | 79.0 |
| MS.gene46337.t1 | MTR_5g011680 | 35.000 | 160 | 83 | 5 | 83 | 229 | 117 | 268 | 2.15e-15 | 75.1 |
| MS.gene46337.t1 | MTR_8g078930 | 34.328 | 134 | 78 | 3 | 107 | 231 | 5 | 137 | 7.89e-15 | 71.2 |
| MS.gene46337.t1 | MTR_4g101990 | 46.269 | 67 | 36 | 0 | 106 | 172 | 147 | 213 | 2.70e-14 | 72.4 |
| MS.gene46337.t1 | MTR_4g069110 | 33.333 | 102 | 68 | 0 | 69 | 170 | 27 | 128 | 3.28e-14 | 69.7 |
| MS.gene46337.t1 | MTR_1g038960 | 33.333 | 195 | 111 | 6 | 77 | 256 | 125 | 315 | 3.33e-14 | 72.4 |
| MS.gene46337.t1 | MTR_4g055833 | 37.500 | 120 | 69 | 2 | 102 | 215 | 121 | 240 | 3.47e-14 | 72.4 |
| MS.gene46337.t1 | MTR_5g011610 | 33.813 | 139 | 85 | 3 | 95 | 233 | 50 | 181 | 1.22e-13 | 70.5 |
| MS.gene46337.t1 | MTR_5g011620 | 34.783 | 115 | 73 | 1 | 101 | 215 | 113 | 225 | 1.33e-13 | 71.2 |
| MS.gene46337.t1 | MTR_6g060670 | 41.441 | 111 | 63 | 2 | 106 | 216 | 180 | 288 | 5.74e-13 | 68.6 |
| MS.gene46337.t1 | MTR_1g071850 | 34.507 | 142 | 65 | 3 | 84 | 225 | 38 | 151 | 5.08e-12 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene46337.t1 | AT2G35270 | 57.556 | 311 | 90 | 6 | 1 | 295 | 1 | 285 | 6.59e-95 | 282 |
| MS.gene46337.t1 | AT4G17800 | 63.836 | 318 | 66 | 9 | 1 | 295 | 1 | 292 | 6.89e-95 | 282 |
| MS.gene46337.t1 | AT4G14465 | 52.016 | 248 | 105 | 4 | 27 | 272 | 24 | 259 | 8.46e-66 | 207 |
| MS.gene46337.t1 | AT1G76500 | 59.239 | 184 | 66 | 1 | 53 | 227 | 49 | 232 | 9.47e-64 | 203 |
| MS.gene46337.t1 | AT2G45430 | 58.590 | 227 | 77 | 4 | 74 | 285 | 87 | 311 | 3.47e-62 | 199 |
| MS.gene46337.t1 | AT2G42940 | 62.179 | 156 | 59 | 0 | 74 | 229 | 51 | 206 | 2.55e-61 | 195 |
| MS.gene46337.t1 | AT3G60870 | 54.680 | 203 | 69 | 4 | 23 | 220 | 17 | 201 | 7.61e-61 | 194 |
| MS.gene46337.t1 | AT4G12050 | 69.811 | 159 | 47 | 1 | 74 | 231 | 116 | 274 | 2.92e-60 | 195 |
| MS.gene46337.t1 | AT4G22810 | 70.807 | 161 | 44 | 1 | 74 | 231 | 103 | 263 | 6.89e-60 | 194 |
| MS.gene46337.t1 | AT3G04570 | 66.456 | 158 | 45 | 1 | 76 | 225 | 80 | 237 | 3.13e-58 | 189 |
| MS.gene46337.t1 | AT4G35390 | 50.538 | 279 | 121 | 3 | 9 | 276 | 2 | 274 | 7.78e-58 | 187 |
| MS.gene46337.t1 | AT5G49700 | 56.442 | 163 | 64 | 2 | 74 | 229 | 54 | 216 | 3.52e-57 | 185 |
| MS.gene46337.t1 | AT1G20900 | 66.875 | 160 | 44 | 1 | 75 | 225 | 85 | 244 | 8.45e-49 | 165 |
| MS.gene46337.t1 | AT3G55560 | 55.500 | 200 | 87 | 2 | 81 | 278 | 93 | 292 | 2.79e-47 | 160 |
| MS.gene46337.t1 | AT1G14490 | 46.961 | 181 | 84 | 4 | 77 | 247 | 6 | 184 | 2.66e-39 | 137 |
| MS.gene46337.t1 | AT1G14490 | 45.408 | 196 | 94 | 5 | 62 | 247 | 11 | 203 | 2.97e-39 | 137 |
| MS.gene46337.t1 | AT3G04590 | 34.225 | 187 | 104 | 4 | 98 | 282 | 166 | 335 | 6.60e-23 | 97.8 |
| MS.gene46337.t1 | AT2G33620 | 42.361 | 144 | 79 | 3 | 75 | 215 | 136 | 278 | 8.20e-23 | 97.1 |
| MS.gene46337.t1 | AT2G33620 | 42.361 | 144 | 79 | 3 | 75 | 215 | 136 | 278 | 8.20e-23 | 97.1 |
| MS.gene46337.t1 | AT2G33620 | 42.361 | 144 | 79 | 3 | 75 | 215 | 136 | 278 | 8.20e-23 | 97.1 |
| MS.gene46337.t1 | AT2G33620 | 42.361 | 144 | 79 | 3 | 75 | 215 | 136 | 278 | 8.20e-23 | 97.1 |
| MS.gene46337.t1 | AT5G62260 | 42.857 | 126 | 65 | 2 | 103 | 223 | 160 | 283 | 8.27e-23 | 95.9 |
| MS.gene46337.t1 | AT5G62260 | 45.763 | 118 | 57 | 2 | 103 | 215 | 160 | 275 | 9.78e-23 | 97.4 |
| MS.gene46337.t1 | AT5G62260 | 45.763 | 118 | 57 | 2 | 103 | 215 | 160 | 275 | 9.78e-23 | 97.4 |
| MS.gene46337.t1 | AT1G63470 | 40.268 | 149 | 76 | 5 | 76 | 215 | 147 | 291 | 1.30e-22 | 96.7 |
| MS.gene46337.t1 | AT4G12080 | 44.348 | 115 | 57 | 2 | 106 | 215 | 173 | 285 | 1.38e-22 | 96.3 |
| MS.gene46337.t1 | AT3G04590 | 37.415 | 147 | 75 | 2 | 106 | 252 | 174 | 303 | 5.64e-22 | 94.0 |
| MS.gene46337.t1 | AT5G51590 | 42.017 | 119 | 62 | 2 | 102 | 215 | 177 | 293 | 5.96e-22 | 95.1 |
| MS.gene46337.t1 | AT2G45850 | 36.257 | 171 | 97 | 4 | 76 | 236 | 132 | 300 | 6.89e-22 | 94.4 |
| MS.gene46337.t1 | AT2G45850 | 36.257 | 171 | 97 | 4 | 76 | 236 | 132 | 300 | 6.89e-22 | 94.4 |
| MS.gene46337.t1 | AT4G17950 | 40.385 | 156 | 86 | 3 | 65 | 215 | 185 | 338 | 4.13e-21 | 93.2 |
| MS.gene46337.t1 | AT4G25320 | 39.098 | 133 | 72 | 3 | 106 | 235 | 169 | 295 | 6.10e-21 | 92.4 |
| MS.gene46337.t1 | AT2G45850 | 36.913 | 149 | 84 | 3 | 76 | 216 | 132 | 278 | 5.12e-20 | 87.8 |
| MS.gene46337.t1 | AT3G61310 | 30.909 | 220 | 132 | 4 | 76 | 289 | 134 | 339 | 5.10e-18 | 83.6 |
| MS.gene46337.t1 | AT5G46640 | 43.226 | 155 | 79 | 4 | 76 | 226 | 155 | 304 | 3.85e-17 | 81.3 |
| MS.gene46337.t1 | AT4G00200 | 42.478 | 113 | 62 | 1 | 106 | 215 | 126 | 238 | 7.21e-16 | 77.0 |
| MS.gene46337.t1 | AT4G00200 | 42.478 | 113 | 62 | 1 | 106 | 215 | 126 | 238 | 7.21e-16 | 77.0 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 130 | 320 | 3.81e-15 | 75.1 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 130 | 320 | 3.81e-15 | 75.1 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 124 | 314 | 4.57e-15 | 75.1 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 124 | 314 | 4.57e-15 | 75.1 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 124 | 314 | 4.57e-15 | 75.1 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 124 | 314 | 4.57e-15 | 75.1 |
| MS.gene46337.t1 | AT1G63480 | 29.231 | 195 | 111 | 7 | 76 | 247 | 124 | 314 | 4.57e-15 | 75.1 |
| MS.gene46337.t1 | AT4G22770 | 43.243 | 74 | 42 | 0 | 99 | 172 | 146 | 219 | 2.32e-14 | 72.8 |
| MS.gene46337.t1 | AT4G22770 | 43.243 | 74 | 42 | 0 | 99 | 172 | 146 | 219 | 2.32e-14 | 72.8 |
Find 100 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGATGGCTGGGTTAGATTT+AGG | 0.137320 | 8.4:-24501953 | MS.gene46337:CDS |
| CCATTTCCTGATCCATCTTC+TGG | 0.220564 | 8.4:-24501188 | MS.gene46337:CDS |
| CTCTCTATTACTTTGATGGC+TGG | 0.242004 | 8.4:-24501965 | None:intergenic |
| TGATGGCTGGGTTAGATTTA+GGG | 0.282094 | 8.4:-24501952 | MS.gene46337:CDS |
| GGCTCCGGCGGTGGCGGTGG+CGG | 0.285683 | 8.4:-24501227 | MS.gene46337:CDS |
| CTTCAGAATCGTGCTGGTTT+TGG | 0.296798 | 8.4:+24501867 | None:intergenic |
| TTAATTCTAAATCCTCAAAA+AGG | 0.306047 | 8.4:+24501071 | None:intergenic |
| CGCAGCCAAGGTTTGGAGCT+TGG | 0.329216 | 8.4:-24501779 | MS.gene46337:CDS |
| CTTCAGATGCAGGCTGAGGC+TGG | 0.363407 | 8.4:-24501263 | MS.gene46337:CDS |
| GTTCATCAGTTACCTGTTGA+TGG | 0.366077 | 8.4:-24501128 | MS.gene46337:CDS |
| TTTGAGATATTGTCCTTGTC+TGG | 0.371554 | 8.4:-24501470 | MS.gene46337:CDS |
| CACCAGCCGCCGCTGGTTGC+CGG | 0.375766 | 8.4:+24501516 | None:intergenic |
| GGTGATGGTGTTGTTGTTGA+AGG | 0.376453 | 8.4:+24501888 | None:intergenic |
| CAAGGCTCCGGCGGTGGCGG+TGG | 0.379675 | 8.4:-24501230 | MS.gene46337:CDS |
| AGCTTAACGATTTATCTTGC+TGG | 0.384930 | 8.4:-24501410 | MS.gene46337:CDS |
| TCAGTTACCTGTTGATGGTT+GGG | 0.397741 | 8.4:-24501123 | MS.gene46337:CDS |
| AGTGATGATCACCGGTGGTT+TGG | 0.402875 | 8.4:+24501685 | None:intergenic |
| AGATGATCGCAGCCAAGGTT+TGG | 0.404818 | 8.4:-24501786 | MS.gene46337:CDS |
| TCTCAAGGCTCCGGCGGTGG+CGG | 0.404852 | 8.4:-24501233 | MS.gene46337:CDS |
| CCAGAAGATGGATCAGGAAA+TGG | 0.417544 | 8.4:+24501188 | None:intergenic |
| TTGGAGCTTGGTTCAGCAGC+CGG | 0.422838 | 8.4:-24501767 | MS.gene46337:CDS |
| GGTTCTCAAGGCTCCGGCGG+TGG | 0.425138 | 8.4:-24501236 | MS.gene46337:CDS |
| TCTCTATTACTTTGATGGCT+GGG | 0.430077 | 8.4:-24501964 | None:intergenic |
| ATCAGTTACCTGTTGATGGT+TGG | 0.432754 | 8.4:-24501124 | MS.gene46337:CDS |
| CTTGTTCTTCAGAATCGTGC+TGG | 0.433912 | 8.4:+24501861 | None:intergenic |
| GTTGGTGAGCTTATCGCGGC+CGG | 0.441179 | 8.4:-24501356 | MS.gene46337:CDS |
| TTTCCCGCCCAACCATCAAC+AGG | 0.455272 | 8.4:+24501116 | None:intergenic |
| CTGCCACCACCAGCTCCTCC+CGG | 0.457572 | 8.4:-24501440 | MS.gene46337:CDS |
| CTAGTTGCTCCGGGAGGAGC+TGG | 0.461233 | 8.4:+24501431 | None:intergenic |
| GCCTACCACGTCTCCTGGTC+CGG | 0.473561 | 8.4:+24501748 | None:intergenic |
| TGAGAAGTTGCCGTTGGAAG+AGG | 0.475190 | 8.4:-24501291 | MS.gene46337:CDS |
| CTTGGTTCAGCAGCCGGACC+AGG | 0.477069 | 8.4:-24501761 | MS.gene46337:CDS |
| AATCGTTAAGCTAGTTGCTC+CGG | 0.477146 | 8.4:+24501421 | None:intergenic |
| ATCCGGCAACCAGCGGCGGC+TGG | 0.482044 | 8.4:-24501518 | MS.gene46337:CDS |
| AGAGGAGCAGCTTCAGATGC+AGG | 0.483216 | 8.4:-24501273 | MS.gene46337:CDS |
| TGCAATCACAATCACTGGCC+CGG | 0.496750 | 8.4:+24501337 | None:intergenic |
| GAGGCTGGAGGAGGTTCTCA+AGG | 0.498113 | 8.4:-24501248 | MS.gene46337:CDS |
| ATCTGTGTTCTTAGCGGCAG+TGG | 0.498629 | 8.4:-24501560 | MS.gene46337:CDS |
| GCTCCGGGAGGAGCTGGTGG+TGG | 0.501296 | 8.4:+24501437 | None:intergenic |
| CTGTGACAAATGTCAGTATC+CGG | 0.502662 | 8.4:-24501535 | MS.gene46337:CDS |
| CGGCGGCCTACCACGTCTCC+TGG | 0.502985 | 8.4:+24501743 | None:intergenic |
| CCGTCCACGTGGCAGACCAC+CGG | 0.511535 | 8.4:-24501723 | MS.gene46337:CDS |
| CGGCAACCAGCGGCGGCTGG+TGG | 0.511641 | 8.4:-24501515 | MS.gene46337:CDS |
| GGTGGTGTTGTTACGCTACA+TGG | 0.516870 | 8.4:-24501497 | MS.gene46337:CDS |
| GTGGTGGGAGGTAGCGTGGT+TGG | 0.517362 | 8.4:-24501374 | MS.gene46337:CDS |
| TTACCTGTTGATGGTTGGGC+GGG | 0.521705 | 8.4:-24501119 | MS.gene46337:CDS |
| GCAGCTTCAGATGCAGGCTG+AGG | 0.522442 | 8.4:-24501267 | MS.gene46337:CDS |
| ATTTATCTTGCTGGAGGACA+AGG | 0.523860 | 8.4:-24501401 | MS.gene46337:CDS |
| GAAGCTGCAATCACAATCAC+TGG | 0.524358 | 8.4:+24501332 | None:intergenic |
| CGTGGGATCTGTGTTCTTAG+CGG | 0.526507 | 8.4:-24501566 | MS.gene46337:CDS |
| CTGAACCAAGCTCCAAACCT+TGG | 0.527609 | 8.4:+24501774 | None:intergenic |
| TGAACATTCTGCATATTCAA+TGG | 0.529701 | 8.4:+24501146 | None:intergenic |
| TTCAAGAATATGAGCTCTGA+GGG | 0.530656 | 8.4:+24501646 | None:intergenic |
| ATTGCCGCCACCGCCACCGC+CGG | 0.532671 | 8.4:+24501223 | None:intergenic |
| TGGAGGACAAGGACAGGTGG+TGG | 0.534409 | 8.4:-24501390 | MS.gene46337:CDS |
| GGTAAACCAGAAGATGGATC+AGG | 0.535636 | 8.4:+24501182 | None:intergenic |
| CTCTCTCGAGTGATGATCAC+CGG | 0.539638 | 8.4:+24501677 | None:intergenic |
| ATGCAGGCTGAGGCTGGAGG+AGG | 0.542838 | 8.4:-24501257 | MS.gene46337:CDS |
| ATCGTTAAGCTAGTTGCTCC+GGG | 0.547154 | 8.4:+24501422 | None:intergenic |
| GGAGGACAAGGACAGGTGGT+GGG | 0.551835 | 8.4:-24501389 | MS.gene46337:CDS |
| ACAACACCACCAGCCGCCGC+TGG | 0.553782 | 8.4:+24501509 | None:intergenic |
| CCGGTGGTCTGCCACGTGGA+CGG | 0.556459 | 8.4:+24501723 | None:intergenic |
| TGCTTATGAGAAGTTGCCGT+TGG | 0.557657 | 8.4:-24501297 | MS.gene46337:CDS |
| GTTGCTCCGGGAGGAGCTGG+TGG | 0.563676 | 8.4:+24501434 | None:intergenic |
| TTGGTGAGCTTATCGCGGCC+GGG | 0.564940 | 8.4:-24501355 | MS.gene46337:CDS |
| ACGTTGACGACGGCGAGCAT+AGG | 0.566838 | 8.4:+24501586 | None:intergenic |
| GGAGGAGGTTCTCAAGGCTC+CGG | 0.567096 | 8.4:-24501242 | MS.gene46337:CDS |
| TCTTGCTGGAGGACAAGGAC+AGG | 0.576199 | 8.4:-24501396 | MS.gene46337:CDS |
| GCTTTATGCAAAACATCCAC+AGG | 0.581801 | 8.4:-24501922 | MS.gene46337:CDS |
| ACAGGTGGTGGGAGGTAGCG+TGG | 0.584119 | 8.4:-24501378 | MS.gene46337:CDS |
| GAATCAAATCGTGTCAGTGT+TGG | 0.584454 | 8.4:-24501839 | MS.gene46337:CDS |
| GGAGGTTCTCAAGGCTCCGG+CGG | 0.584563 | 8.4:-24501239 | MS.gene46337:CDS |
| GAAGAAGATGATCGCAGCCA+AGG | 0.586520 | 8.4:-24501791 | MS.gene46337:CDS |
| TCAAATCGTGTCAGTGTTGG+TGG | 0.587254 | 8.4:-24501836 | MS.gene46337:CDS |
| CGTCCACGTGGCAGACCACC+GGG | 0.589470 | 8.4:-24501722 | MS.gene46337:CDS |
| TCTTCTTCATTCGATGAGAA+CGG | 0.591806 | 8.4:+24501806 | None:intergenic |
| CAGATGCAGGCTGAGGCTGG+AGG | 0.594179 | 8.4:-24501260 | MS.gene46337:CDS |
| TTAACGATTTATCTTGCTGG+AGG | 0.597516 | 8.4:-24501407 | MS.gene46337:CDS |
| TTGACGACGGCGAGCATAGG+TGG | 0.600696 | 8.4:+24501589 | None:intergenic |
| CAGTATCCGGCAACCAGCGG+CGG | 0.607370 | 8.4:-24501522 | MS.gene46337:CDS |
| CATATTCTTGAAGTTGCCAG+TGG | 0.608398 | 8.4:-24501635 | MS.gene46337:CDS |
| AATCGTGTCAGTGTTGGTGG+TGG | 0.611425 | 8.4:-24501833 | MS.gene46337:CDS |
| TATGCTCGCCGTCGTCAACG+TGG | 0.615533 | 8.4:-24501584 | MS.gene46337:CDS |
| GTTACCTGTTGATGGTTGGG+CGG | 0.617928 | 8.4:-24501120 | MS.gene46337:CDS |
| CACAGATCCCACGTTGACGA+CGG | 0.619869 | 8.4:+24501576 | None:intergenic |
| AGCAGCCGGACCAGGAGACG+TGG | 0.625149 | 8.4:-24501753 | MS.gene46337:CDS |
| GGACAAGGACAGGTGGTGGG+AGG | 0.626108 | 8.4:-24501386 | MS.gene46337:CDS |
| TGAAGCTGCTCCTCTTCCAA+CGG | 0.628906 | 8.4:+24501281 | None:intergenic |
| ATGCTCGCCGTCGTCAACGT+GGG | 0.633340 | 8.4:-24501583 | MS.gene46337:CDS |
| TGTCAGTATCCGGCAACCAG+CGG | 0.635215 | 8.4:-24501525 | MS.gene46337:CDS |
| GTGGTAGGCCGCCGTCCACG+TGG | 0.637156 | 8.4:-24501734 | MS.gene46337:CDS |
| TGCTGGAGGACAAGGACAGG+TGG | 0.640269 | 8.4:-24501393 | MS.gene46337:CDS |
| GTGGTCTGCCACGTGGACGG+CGG | 0.641867 | 8.4:+24501726 | None:intergenic |
| CTTCAAGAATATGAGCTCTG+AGG | 0.644966 | 8.4:+24501645 | None:intergenic |
| TCTCGAGTGATGATCACCGG+TGG | 0.659633 | 8.4:+24501680 | None:intergenic |
| CGTGGTTGGTGAGCTTATCG+CGG | 0.676449 | 8.4:-24501360 | MS.gene46337:CDS |
| GATCCCGGTGGTCTGCCACG+TGG | 0.686332 | 8.4:+24501719 | None:intergenic |
| GCCGGACCAGGAGACGTGGT+AGG | 0.693052 | 8.4:-24501749 | MS.gene46337:CDS |
| TGGCAGAAAAGATCCAGACA+AGG | 0.722466 | 8.4:+24501457 | None:intergenic |
| GTTAAGCTAGTTGCTCCGGG+AGG | 0.738557 | 8.4:+24501425 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | TTCAATGGCAAATTGAAAAA+CGG | + | chr8.4:24501877-24501896 | None:intergenic | 25.0% |
| TGAACATTCTGCATATTCAA+TGG | + | chr8.4:24501892-24501911 | None:intergenic | 30.0% | |
| AAAAACGGTAAACCAGAAGA+TGG | + | chr8.4:24501862-24501881 | None:intergenic | 35.0% | |
| AGCTTAACGATTTATCTTGC+TGG | - | chr8.4:24501625-24501644 | MS.gene46337:CDS | 35.0% | |
| TCTTCTTCATTCGATGAGAA+CGG | + | chr8.4:24501232-24501251 | None:intergenic | 35.0% | |
| TTAACGATTTATCTTGCTGG+AGG | - | chr8.4:24501628-24501647 | MS.gene46337:CDS | 35.0% | |
| TTCAAAAACATCAGAACCAC+TGG | + | chr8.4:24501419-24501438 | None:intergenic | 35.0% | |
| ! | TTCAAGAATATGAGCTCTGA+GGG | + | chr8.4:24501392-24501411 | None:intergenic | 35.0% |
| ! | TTTGAGATATTGTCCTTGTC+TGG | - | chr8.4:24501565-24501584 | MS.gene46337:CDS | 35.0% |
| AATCGTTAAGCTAGTTGCTC+CGG | + | chr8.4:24501617-24501636 | None:intergenic | 40.0% | |
| ATTTATCTTGCTGGAGGACA+AGG | - | chr8.4:24501634-24501653 | MS.gene46337:CDS | 40.0% | |
| CATATTCTTGAAGTTGCCAG+TGG | - | chr8.4:24501400-24501419 | MS.gene46337:CDS | 40.0% | |
| CTGTGACAAATGTCAGTATC+CGG | - | chr8.4:24501500-24501519 | MS.gene46337:CDS | 40.0% | |
| CTTCAAGAATATGAGCTCTG+AGG | + | chr8.4:24501393-24501412 | None:intergenic | 40.0% | |
| GAAAAACAAAGCCAAACCAC+CGG | - | chr8.4:24501339-24501358 | MS.gene46337:CDS | 40.0% | |
| GAATCAAATCGTGTCAGTGT+TGG | - | chr8.4:24501196-24501215 | MS.gene46337:CDS | 40.0% | |
| GCTTTATGCAAAACATCCAC+AGG | - | chr8.4:24501113-24501132 | MS.gene46337:CDS | 40.0% | |
| GTTCATCAGTTACCTGTTGA+TGG | - | chr8.4:24501907-24501926 | MS.gene46337:CDS | 40.0% | |
| !! | ATCAGTTACCTGTTGATGGT+TGG | - | chr8.4:24501911-24501930 | MS.gene46337:CDS | 40.0% |
| !! | TCAGTTACCTGTTGATGGTT+GGG | - | chr8.4:24501912-24501931 | MS.gene46337:CDS | 40.0% |
| !!! | TTGGCTTTGTTTTTCGATCC+CGG | + | chr8.4:24501334-24501353 | None:intergenic | 40.0% |
| ATCGTTAAGCTAGTTGCTCC+GGG | + | chr8.4:24501616-24501635 | None:intergenic | 45.0% | |
| CCAGAAGATGGATCAGGAAA+TGG | + | chr8.4:24501850-24501869 | None:intergenic | 45.0% | |
| CCATTTCCTGATCCATCTTC+TGG | - | chr8.4:24501847-24501866 | MS.gene46337:CDS | 45.0% | |
| CTTGTTCTTCAGAATCGTGC+TGG | + | chr8.4:24501177-24501196 | None:intergenic | 45.0% | |
| GAAGCTGCAATCACAATCAC+TGG | + | chr8.4:24501706-24501725 | None:intergenic | 45.0% | |
| GGTAAACCAGAAGATGGATC+AGG | + | chr8.4:24501856-24501875 | None:intergenic | 45.0% | |
| TGCTTATGAGAAGTTGCCGT+TGG | - | chr8.4:24501738-24501757 | MS.gene46337:CDS | 45.0% | |
| TGGCAGAAAAGATCCAGACA+AGG | + | chr8.4:24501581-24501600 | None:intergenic | 45.0% | |
| ! | TCAAATCGTGTCAGTGTTGG+TGG | - | chr8.4:24501199-24501218 | MS.gene46337:CDS | 45.0% |
| !! | GAAGGTGTAAGTTTTGCCTG+TGG | + | chr8.4:24501132-24501151 | None:intergenic | 45.0% |
| !! | GGTGATGGTGTTGTTGTTGA+AGG | + | chr8.4:24501150-24501169 | None:intergenic | 45.0% |
| !!! | AATCGTGCTGGTTTTGGTGA+TGG | + | chr8.4:24501165-24501184 | None:intergenic | 45.0% |
| !!! | CTTCAGAATCGTGCTGGTTT+TGG | + | chr8.4:24501171-24501190 | None:intergenic | 45.0% |
| AGATGATCGCAGCCAAGGTT+TGG | - | chr8.4:24501249-24501268 | MS.gene46337:CDS | 50.0% | |
| AGTGATGATCACCGGTGGTT+TGG | + | chr8.4:24501353-24501372 | None:intergenic | 50.0% | |
| ATCTGTGTTCTTAGCGGCAG+TGG | - | chr8.4:24501475-24501494 | MS.gene46337:CDS | 50.0% | |
| CGTGGGATCTGTGTTCTTAG+CGG | - | chr8.4:24501469-24501488 | MS.gene46337:CDS | 50.0% | |
| CTCTCTCGAGTGATGATCAC+CGG | + | chr8.4:24501361-24501380 | None:intergenic | 50.0% | |
| CTGAACCAAGCTCCAAACCT+TGG | + | chr8.4:24501264-24501283 | None:intergenic | 50.0% | |
| GAAGAAGATGATCGCAGCCA+AGG | - | chr8.4:24501244-24501263 | MS.gene46337:CDS | 50.0% | |
| TGAAGCTGCTCCTCTTCCAA+CGG | + | chr8.4:24501757-24501776 | None:intergenic | 50.0% | |
| TGAGAAGTTGCCGTTGGAAG+AGG | - | chr8.4:24501744-24501763 | MS.gene46337:CDS | 50.0% | |
| TGCAATCACAATCACTGGCC+CGG | + | chr8.4:24501701-24501720 | None:intergenic | 50.0% | |
| !! | AATCGTGTCAGTGTTGGTGG+TGG | - | chr8.4:24501202-24501221 | MS.gene46337:CDS | 50.0% |
| !! | GGTGGTGTTGTTACGCTACA+TGG | - | chr8.4:24501538-24501557 | MS.gene46337:CDS | 50.0% |
| !! | GTTACCTGTTGATGGTTGGG+CGG | - | chr8.4:24501915-24501934 | MS.gene46337:CDS | 50.0% |
| !! | TTACCTGTTGATGGTTGGGC+GGG | - | chr8.4:24501916-24501935 | MS.gene46337:CDS | 50.0% |
| !!! | GCTTTGTTTTTCGATCCCGG+TGG | + | chr8.4:24501331-24501350 | None:intergenic | 50.0% |
| AGAGGAGCAGCTTCAGATGC+AGG | - | chr8.4:24501762-24501781 | MS.gene46337:CDS | 55.0% | |
| CACAGATCCCACGTTGACGA+CGG | + | chr8.4:24501462-24501481 | None:intergenic | 55.0% | |
| GTTAAGCTAGTTGCTCCGGG+AGG | + | chr8.4:24501613-24501632 | None:intergenic | 55.0% | |
| TCTCGAGTGATGATCACCGG+TGG | + | chr8.4:24501358-24501377 | None:intergenic | 55.0% | |
| TCTTGCTGGAGGACAAGGAC+AGG | - | chr8.4:24501639-24501658 | MS.gene46337:CDS | 55.0% | |
| TGTCAGTATCCGGCAACCAG+CGG | - | chr8.4:24501510-24501529 | MS.gene46337:CDS | 55.0% | |
| TTGGAGCTTGGTTCAGCAGC+CGG | - | chr8.4:24501268-24501287 | MS.gene46337:CDS | 55.0% | |
| TTTCCCGCCCAACCATCAAC+AGG | + | chr8.4:24501922-24501941 | None:intergenic | 55.0% | |
| !! | CGTGGTTGGTGAGCTTATCG+CGG | - | chr8.4:24501675-24501694 | MS.gene46337:CDS | 55.0% |
| ACGTTGACGACGGCGAGCAT+AGG | + | chr8.4:24501452-24501471 | None:intergenic | 60.0% | |
| ATGCTCGCCGTCGTCAACGT+GGG | - | chr8.4:24501452-24501471 | MS.gene46337:CDS | 60.0% | |
| CTTCAGATGCAGGCTGAGGC+TGG | - | chr8.4:24501772-24501791 | MS.gene46337:CDS | 60.0% | |
| GAGGCTGGAGGAGGTTCTCA+AGG | - | chr8.4:24501787-24501806 | MS.gene46337:CDS | 60.0% | |
| GCAGCTTCAGATGCAGGCTG+AGG | - | chr8.4:24501768-24501787 | MS.gene46337:CDS | 60.0% | |
| GGAGGACAAGGACAGGTGGT+GGG | - | chr8.4:24501646-24501665 | MS.gene46337:CDS | 60.0% | |
| GGAGGAGGTTCTCAAGGCTC+CGG | - | chr8.4:24501793-24501812 | MS.gene46337:CDS | 60.0% | |
| TATGCTCGCCGTCGTCAACG+TGG | - | chr8.4:24501451-24501470 | MS.gene46337:CDS | 60.0% | |
| TGCTGGAGGACAAGGACAGG+TGG | - | chr8.4:24501642-24501661 | MS.gene46337:CDS | 60.0% | |
| TGGAGGACAAGGACAGGTGG+TGG | - | chr8.4:24501645-24501664 | MS.gene46337:CDS | 60.0% | |
| TTGACGACGGCGAGCATAGG+TGG | + | chr8.4:24501449-24501468 | None:intergenic | 60.0% | |
| TTGGTGAGCTTATCGCGGCC+GGG | - | chr8.4:24501680-24501699 | MS.gene46337:CDS | 60.0% | |
| ! | CGCAGCCAAGGTTTGGAGCT+TGG | - | chr8.4:24501256-24501275 | MS.gene46337:CDS | 60.0% |
| ! | GTTGGTGAGCTTATCGCGGC+CGG | - | chr8.4:24501679-24501698 | MS.gene46337:CDS | 60.0% |
| ATGCAGGCTGAGGCTGGAGG+AGG | - | chr8.4:24501778-24501797 | MS.gene46337:CDS | 65.0% | |
| CAGATGCAGGCTGAGGCTGG+AGG | - | chr8.4:24501775-24501794 | MS.gene46337:CDS | 65.0% | |
| CAGTATCCGGCAACCAGCGG+CGG | - | chr8.4:24501513-24501532 | MS.gene46337:CDS | 65.0% | |
| CTAGTTGCTCCGGGAGGAGC+TGG | + | chr8.4:24501607-24501626 | None:intergenic | 65.0% | |
| CTTGGTTCAGCAGCCGGACC+AGG | - | chr8.4:24501274-24501293 | MS.gene46337:CDS | 65.0% | |
| GCCTACCACGTCTCCTGGTC+CGG | + | chr8.4:24501290-24501309 | None:intergenic | 65.0% | |
| GGAGGTTCTCAAGGCTCCGG+CGG | - | chr8.4:24501796-24501815 | MS.gene46337:CDS | 65.0% | |
| ! | GTGGTGGGAGGTAGCGTGGT+TGG | - | chr8.4:24501661-24501680 | MS.gene46337:CDS | 65.0% |
| !! | ACAGGTGGTGGGAGGTAGCG+TGG | - | chr8.4:24501657-24501676 | MS.gene46337:CDS | 65.0% |
| !! | GGACAAGGACAGGTGGTGGG+AGG | - | chr8.4:24501649-24501668 | MS.gene46337:CDS | 65.0% |
| ACAACACCACCAGCCGCCGC+TGG | + | chr8.4:24501529-24501548 | None:intergenic | 70.0% | |
| AGCAGCCGGACCAGGAGACG+TGG | - | chr8.4:24501282-24501301 | MS.gene46337:CDS | 70.0% | |
| CCGGTGGTCTGCCACGTGGA+CGG | + | chr8.4:24501315-24501334 | None:intergenic | 70.0% | |
| CCGTCCACGTGGCAGACCAC+CGG | - | chr8.4:24501312-24501331 | MS.gene46337:CDS | 70.0% | |
| CGTCCACGTGGCAGACCACC+GGG | - | chr8.4:24501313-24501332 | MS.gene46337:CDS | 70.0% | |
| CTGCCACCACCAGCTCCTCC+CGG | - | chr8.4:24501595-24501614 | MS.gene46337:CDS | 70.0% | |
| GATCCCGGTGGTCTGCCACG+TGG | + | chr8.4:24501319-24501338 | None:intergenic | 70.0% | |
| GCCGGACCAGGAGACGTGGT+AGG | - | chr8.4:24501286-24501305 | MS.gene46337:CDS | 70.0% | |
| GGTTCTCAAGGCTCCGGCGG+TGG | - | chr8.4:24501799-24501818 | MS.gene46337:CDS | 70.0% | |
| GTGGTCTGCCACGTGGACGG+CGG | + | chr8.4:24501312-24501331 | None:intergenic | 70.0% | |
| GTTGCTCCGGGAGGAGCTGG+TGG | + | chr8.4:24501604-24501623 | None:intergenic | 70.0% | |
| TCTCAAGGCTCCGGCGGTGG+CGG | - | chr8.4:24501802-24501821 | MS.gene46337:CDS | 70.0% | |
| ATCCGGCAACCAGCGGCGGC+TGG | - | chr8.4:24501517-24501536 | MS.gene46337:CDS | 75.0% | |
| ATTGCCGCCACCGCCACCGC+CGG | + | chr8.4:24501815-24501834 | None:intergenic | 75.0% | |
| CGGCGGCCTACCACGTCTCC+TGG | + | chr8.4:24501295-24501314 | None:intergenic | 75.0% | |
| GCTCCGGGAGGAGCTGGTGG+TGG | + | chr8.4:24501601-24501620 | None:intergenic | 75.0% | |
| GTGGTAGGCCGCCGTCCACG+TGG | - | chr8.4:24501301-24501320 | MS.gene46337:CDS | 75.0% | |
| ! | CACCAGCCGCCGCTGGTTGC+CGG | + | chr8.4:24501522-24501541 | None:intergenic | 75.0% |
| ! | CGGCAACCAGCGGCGGCTGG+TGG | - | chr8.4:24501520-24501539 | MS.gene46337:CDS | 80.0% |
| !! | CAAGGCTCCGGCGGTGGCGG+TGG | - | chr8.4:24501805-24501824 | MS.gene46337:CDS | 80.0% |
| !! | GGCTCCGGCGGTGGCGGTGG+CGG | - | chr8.4:24501808-24501827 | MS.gene46337:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 24501085 | 24501972 | 24501085 | ID=MS.gene46337 |
| chr8.4 | mRNA | 24501085 | 24501972 | 24501085 | ID=MS.gene46337.t1;Parent=MS.gene46337 |
| chr8.4 | exon | 24501085 | 24501972 | 24501085 | ID=MS.gene46337.t1.exon1;Parent=MS.gene46337.t1 |
| chr8.4 | CDS | 24501085 | 24501972 | 24501085 | ID=cds.MS.gene46337.t1;Parent=MS.gene46337.t1 |
| Gene Sequence |
| Protein sequence |
