Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59616.t1 | XP_013444714.1 | 98.6 | 146 | 2 | 0 | 1 | 146 | 1 | 146 | 1.30E-74 | 288.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59616.t1 | P56331 | 90.5 | 147 | 11 | 2 | 1 | 146 | 1 | 145 | 6.7e-67 | 254.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59616.t1 | G7ZYQ6 | 98.6 | 146 | 2 | 0 | 1 | 146 | 1 | 146 | 9.6e-75 | 288.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene04918 | MS.gene59616 | 0.826737 | 2.30E-54 | -1.69E-46 |
| MS.gene04919 | MS.gene59616 | 0.817705 | 2.87E-52 | -1.69E-46 |
| MS.gene04920 | MS.gene59616 | 0.842655 | 2.26E-58 | -1.69E-46 |
| MS.gene049283 | MS.gene59616 | 0.869802 | 2.36E-66 | -1.69E-46 |
| MS.gene049368 | MS.gene59616 | 0.803183 | 3.94E-49 | -1.69E-46 |
| MS.gene049419 | MS.gene59616 | -0.844657 | 6.60E-59 | -1.69E-46 |
| MS.gene049499 | MS.gene59616 | 0.843545 | 1.31E-58 | -1.69E-46 |
| MS.gene049580 | MS.gene59616 | 0.808586 | 2.88E-50 | -1.69E-46 |
| MS.gene049653 | MS.gene59616 | 0.800022 | 1.75E-48 | -1.69E-46 |
| MS.gene049680 | MS.gene59616 | 0.870563 | 1.33E-66 | -1.69E-46 |
| MS.gene049951 | MS.gene59616 | 0.800237 | 1.58E-48 | -1.69E-46 |
| MS.gene049983 | MS.gene59616 | 0.828868 | 7.08E-55 | -1.69E-46 |
| MS.gene050271 | MS.gene59616 | 0.815275 | 1.00E-51 | -1.69E-46 |
| MS.gene05029 | MS.gene59616 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene59616 | 0.803372 | 3.60E-49 | -1.69E-46 |
| MS.gene050646 | MS.gene59616 | 0.824536 | 7.65E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene59616 | 0.810115 | 1.35E-50 | -1.69E-46 |
| MS.gene050752 | MS.gene59616 | 0.860237 | 2.38E-63 | -1.69E-46 |
| MS.gene050945 | MS.gene59616 | 0.857316 | 1.77E-62 | -1.69E-46 |
| MS.gene050955 | MS.gene59616 | 0.870428 | 1.47E-66 | -1.69E-46 |
| MS.gene051003 | MS.gene59616 | 0.856166 | 3.87E-62 | -1.69E-46 |
| MS.gene051043 | MS.gene59616 | 0.807598 | 4.67E-50 | -1.69E-46 |
| MS.gene051154 | MS.gene59616 | 0.823532 | 1.32E-53 | -1.69E-46 |
| MS.gene051234 | MS.gene59616 | 0.82548 | 4.58E-54 | -1.69E-46 |
| MS.gene051343 | MS.gene59616 | 0.850234 | 1.94E-60 | -1.69E-46 |
| MS.gene051597 | MS.gene59616 | 0.826396 | 2.78E-54 | -1.69E-46 |
| MS.gene051699 | MS.gene59616 | 0.864762 | 9.63E-65 | -1.69E-46 |
| MS.gene05188 | MS.gene59616 | 0.803331 | 3.67E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene59616 | 0.810856 | 9.36E-51 | -1.69E-46 |
| MS.gene051975 | MS.gene59616 | 0.842359 | 2.71E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene59616 | 0.820361 | 7.14E-53 | -1.69E-46 |
| MS.gene052108 | MS.gene59616 | 0.816941 | 4.26E-52 | -1.69E-46 |
| MS.gene052342 | MS.gene59616 | 0.803131 | 4.04E-49 | -1.69E-46 |
| MS.gene052479 | MS.gene59616 | 0.840563 | 8.07E-58 | -1.69E-46 |
| MS.gene052500 | MS.gene59616 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene052518 | MS.gene59616 | 0.818131 | 2.30E-52 | -1.69E-46 |
| MS.gene052533 | MS.gene59616 | 0.807293 | 5.43E-50 | -1.69E-46 |
| MS.gene052685 | MS.gene59616 | 0.81194 | 5.44E-51 | -1.69E-46 |
| MS.gene052793 | MS.gene59616 | 0.826931 | 2.07E-54 | -1.69E-46 |
| MS.gene052954 | MS.gene59616 | 0.837594 | 4.74E-57 | -1.69E-46 |
| MS.gene053006 | MS.gene59616 | 0.837096 | 6.36E-57 | -1.69E-46 |
| MS.gene053045 | MS.gene59616 | 0.815639 | 8.34E-52 | -1.69E-46 |
| MS.gene053058 | MS.gene59616 | 0.828542 | 8.48E-55 | -1.69E-46 |
| MS.gene053228 | MS.gene59616 | 0.807161 | 5.79E-50 | -1.69E-46 |
| MS.gene053272 | MS.gene59616 | -0.8282 | 1.03E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene59616 | 0.833255 | 5.92E-56 | -1.69E-46 |
| MS.gene053564 | MS.gene59616 | 0.811211 | 7.84E-51 | -1.69E-46 |
| MS.gene053879 | MS.gene59616 | 0.842806 | 2.06E-58 | -1.69E-46 |
| MS.gene053931 | MS.gene59616 | 0.82305 | 1.71E-53 | -1.69E-46 |
| MS.gene053963 | MS.gene59616 | 0.85312 | 2.95E-61 | -1.69E-46 |
| MS.gene054004 | MS.gene59616 | 0.825315 | 5.01E-54 | -1.69E-46 |
| MS.gene054222 | MS.gene59616 | 0.820073 | 8.32E-53 | -1.69E-46 |
| MS.gene054328 | MS.gene59616 | 0.801816 | 7.53E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene59616 | 0.867489 | 1.32E-65 | -1.69E-46 |
| MS.gene054413 | MS.gene59616 | 0.803154 | 3.99E-49 | -1.69E-46 |
| MS.gene054479 | MS.gene59616 | 0.813274 | 2.78E-51 | -1.69E-46 |
| MS.gene05469 | MS.gene59616 | 0.8334 | 5.45E-56 | -1.69E-46 |
| MS.gene054892 | MS.gene59616 | 0.80077 | 1.23E-48 | -1.69E-46 |
| MS.gene054893 | MS.gene59616 | 0.808806 | 2.58E-50 | -1.69E-46 |
| MS.gene054957 | MS.gene59616 | 0.844781 | 6.11E-59 | -1.69E-46 |
| MS.gene055150 | MS.gene59616 | 0.837301 | 5.64E-57 | -1.69E-46 |
| MS.gene05517 | MS.gene59616 | 0.819506 | 1.12E-52 | -1.69E-46 |
| MS.gene05548 | MS.gene59616 | 0.810628 | 1.05E-50 | -1.69E-46 |
| MS.gene055555 | MS.gene59616 | 0.831439 | 1.67E-55 | -1.69E-46 |
| MS.gene055841 | MS.gene59616 | 0.840252 | 9.72E-58 | -1.69E-46 |
| MS.gene056071 | MS.gene59616 | 0.818705 | 1.71E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene59616 | 0.802582 | 5.24E-49 | -1.69E-46 |
| MS.gene056363 | MS.gene59616 | 0.804147 | 2.48E-49 | -1.69E-46 |
| MS.gene056699 | MS.gene59616 | 0.829705 | 4.43E-55 | -1.69E-46 |
| MS.gene056776 | MS.gene59616 | 0.815454 | 9.17E-52 | -1.69E-46 |
| MS.gene056787 | MS.gene59616 | 0.800414 | 1.46E-48 | -1.69E-46 |
| MS.gene05689 | MS.gene59616 | 0.813252 | 2.81E-51 | -1.69E-46 |
| MS.gene056986 | MS.gene59616 | 0.853429 | 2.40E-61 | -1.69E-46 |
| MS.gene057102 | MS.gene59616 | 0.861838 | 7.74E-64 | -1.69E-46 |
| MS.gene057155 | MS.gene59616 | 0.800754 | 1.24E-48 | -1.69E-46 |
| MS.gene057208 | MS.gene59616 | 0.868384 | 6.80E-66 | -1.69E-46 |
| MS.gene057392 | MS.gene59616 | 0.828053 | 1.11E-54 | -1.69E-46 |
| MS.gene057622 | MS.gene59616 | 0.838603 | 2.61E-57 | -1.69E-46 |
| MS.gene057694 | MS.gene59616 | 0.810249 | 1.27E-50 | -1.69E-46 |
| MS.gene057705 | MS.gene59616 | 0.833044 | 6.68E-56 | -1.69E-46 |
| MS.gene05781 | MS.gene59616 | 0.839563 | 1.47E-57 | -1.69E-46 |
| MS.gene057999 | MS.gene59616 | 0.850911 | 1.25E-60 | -1.69E-46 |
| MS.gene058008 | MS.gene59616 | 0.837792 | 4.22E-57 | -1.69E-46 |
| MS.gene058009 | MS.gene59616 | 0.815542 | 8.76E-52 | -1.69E-46 |
| MS.gene058074 | MS.gene59616 | 0.80592 | 1.06E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene59616 | 0.854058 | 1.58E-61 | -1.69E-46 |
| MS.gene058279 | MS.gene59616 | 0.806646 | 7.43E-50 | -1.69E-46 |
| MS.gene058592 | MS.gene59616 | 0.839679 | 1.37E-57 | -1.69E-46 |
| MS.gene058781 | MS.gene59616 | 0.844533 | 7.13E-59 | -1.69E-46 |
| MS.gene058783 | MS.gene59616 | 0.85004 | 2.20E-60 | -1.69E-46 |
| MS.gene05878 | MS.gene59616 | 0.806316 | 8.73E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene59616 | 0.86678 | 2.22E-65 | -1.69E-46 |
| MS.gene059227 | MS.gene59616 | 0.800478 | 1.41E-48 | -1.69E-46 |
| MS.gene05952 | MS.gene59616 | 0.868754 | 5.16E-66 | -1.69E-46 |
| MS.gene05985 | MS.gene59616 | -0.869801 | 2.36E-66 | -1.69E-46 |
| MS.gene059901 | MS.gene59616 | -0.825299 | 5.06E-54 | -1.69E-46 |
| MS.gene059935 | MS.gene59616 | 0.800339 | 1.51E-48 | -1.69E-46 |
| MS.gene06011 | MS.gene59616 | 0.820743 | 5.84E-53 | -1.69E-46 |
| MS.gene06018 | MS.gene59616 | 0.829735 | 4.36E-55 | -1.69E-46 |
| MS.gene060244 | MS.gene59616 | 0.843388 | 1.44E-58 | -1.69E-46 |
| MS.gene060259 | MS.gene59616 | 0.83185 | 1.32E-55 | -1.69E-46 |
| MS.gene060365 | MS.gene59616 | 0.825561 | 4.38E-54 | -1.69E-46 |
| MS.gene060763 | MS.gene59616 | 0.824303 | 8.68E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene59616 | 0.804242 | 2.37E-49 | -1.69E-46 |
| MS.gene060933 | MS.gene59616 | 0.809541 | 1.80E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene59616 | 0.854791 | 9.73E-62 | -1.69E-46 |
| MS.gene060937 | MS.gene59616 | 0.858947 | 5.80E-63 | -1.69E-46 |
| MS.gene061100 | MS.gene59616 | 0.829141 | 6.08E-55 | -1.69E-46 |
| MS.gene061160 | MS.gene59616 | 0.829137 | 6.09E-55 | -1.69E-46 |
| MS.gene061243 | MS.gene59616 | 0.816283 | 5.99E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59616.t1 | MTR_8g028180 | 98.630 | 146 | 2 | 0 | 1 | 146 | 1 | 146 | 3.24e-101 | 286 |
| MS.gene59616.t1 | MTR_3g005520 | 83.333 | 150 | 21 | 1 | 1 | 146 | 1 | 150 | 2.32e-77 | 226 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59616.t1 | AT2G04520 | 87.671 | 146 | 17 | 1 | 1 | 146 | 1 | 145 | 8.27e-85 | 245 |
| MS.gene59616.t1 | AT5G35680 | 86.986 | 146 | 18 | 1 | 1 | 146 | 1 | 145 | 7.68e-80 | 232 |
| MS.gene59616.t1 | AT5G35680 | 86.986 | 146 | 18 | 1 | 1 | 146 | 1 | 145 | 7.68e-80 | 232 |
| MS.gene59616.t1 | AT5G35680 | 93.277 | 119 | 8 | 0 | 1 | 119 | 1 | 119 | 6.39e-78 | 228 |
Find 49 sgRNAs with CRISPR-Local
Find 46 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGATATTGATAAGATTTA+AGG | 0.166122 | 8.1:+73596335 | MS.gene59616:CDS |
| TGTTGGGTTGCGTGATTATC+AGG | 0.308178 | 8.1:+73596148 | MS.gene59616:CDS |
| CCTCCCTTTCCCTTGTTCTT+CGG | 0.331257 | 8.1:-73595918 | None:intergenic |
| GCTGGGGATATTATTCTTGT+TGG | 0.331915 | 8.1:+73596131 | MS.gene59616:CDS |
| TCATTAAGCCTCACACCTTC+CGG | 0.357600 | 8.1:-73596242 | None:intergenic |
| GGAATTGGTGGTGGGATTGA+TGG | 0.360212 | 8.1:+73596266 | MS.gene59616:CDS |
| CTGGGGATATTATTCTTGTT+GGG | 0.363705 | 8.1:+73596132 | MS.gene59616:CDS |
| GAAAGATGCACAAGAAGGTT+TGG | 0.408452 | 8.1:+73596102 | MS.gene59616:CDS |
| AGGATATTGATAAGATTTAA+GGG | 0.414173 | 8.1:+73596336 | MS.gene59616:CDS |
| CTTTCCCTTGTTCTTCGGCA+TGG | 0.425552 | 8.1:-73595913 | None:intergenic |
| GAATTGGTGGTGGGATTGAT+GGG | 0.434528 | 8.1:+73596267 | MS.gene59616:CDS |
| GAAGGCGTATAGCGAGCTTC+CGG | 0.446342 | 8.1:+73596223 | MS.gene59616:CDS |
| AAGAAGGTTTGGATTGCTGC+TGG | 0.450047 | 8.1:+73596113 | MS.gene59616:CDS |
| TTCAACAACCTCGCCTCATC+CGG | 0.452149 | 8.1:-73596203 | None:intergenic |
| TTATATTGAGTTTGAGGATG+AGG | 0.463979 | 8.1:+73596316 | MS.gene59616:CDS |
| GCACAGGTTCTTCGTATGCT+TGG | 0.465282 | 8.1:+73596020 | MS.gene59616:CDS |
| GGGGATGATGATGAGGGTGA+TGG | 0.471229 | 8.1:+73596287 | MS.gene59616:CDS |
| GGGATGATGATGAGGGTGAT+GGG | 0.477444 | 8.1:+73596288 | MS.gene59616:CDS |
| GAATGATTATATTGAGTTTG+AGG | 0.491210 | 8.1:+73596310 | MS.gene59616:CDS |
| GTGAGGCTTAATGAAGGAAT+TGG | 0.513375 | 8.1:+73596251 | MS.gene59616:CDS |
| CTTAATGAAGGAATTGGTGG+TGG | 0.513624 | 8.1:+73596257 | MS.gene59616:CDS |
| GAAGGTTTGGATTGCTGCTG+GGG | 0.517248 | 8.1:+73596115 | MS.gene59616:CDS |
| GCGTGATTATCAGGATGATA+AGG | 0.518535 | 8.1:+73596157 | MS.gene59616:CDS |
| GGATGAGGCGAGGTTGTTGA+AGG | 0.519284 | 8.1:+73596205 | MS.gene59616:CDS |
| AGAAGGTTTGGATTGCTGCT+GGG | 0.519846 | 8.1:+73596114 | MS.gene59616:CDS |
| CCTTCTTGTGCATCTTTCCA+CGG | 0.526928 | 8.1:-73596097 | None:intergenic |
| ATGCCGAAGAACAAGGGAAA+GGG | 0.538255 | 8.1:+73595915 | MS.gene59616:CDS |
| GATTGATGGGGATGATGATG+AGG | 0.545936 | 8.1:+73596280 | MS.gene59616:CDS |
| TTCAACCATGCCGAAGAACA+AGG | 0.546102 | 8.1:+73595908 | None:intergenic |
| GTTCTTCGTATGCTTGGAAA+CGG | 0.546331 | 8.1:+73596026 | MS.gene59616:CDS |
| CTTGAAGTATATGCCGGATG+AGG | 0.557673 | 8.1:+73596190 | MS.gene59616:CDS |
| ATTGATGGGGATGATGATGA+GGG | 0.568262 | 8.1:+73596281 | MS.gene59616:CDS |
| CTTTGTTCCATCGATACACA+TGG | 0.573074 | 8.1:-73596060 | None:intergenic |
| GGAGGAAAGAATCGCAAGAG+AGG | 0.578624 | 8.1:+73595936 | MS.gene59616:CDS |
| CCGTGGAAAGATGCACAAGA+AGG | 0.600822 | 8.1:+73596097 | MS.gene59616:CDS |
| CATGCCGAAGAACAAGGGAA+AGG | 0.602323 | 8.1:+73595914 | None:intergenic |
| TTAATGAAGGAATTGGTGGT+GGG | 0.613970 | 8.1:+73596258 | MS.gene59616:CDS |
| AAGCGTCTCTGTCATATCCG+TGG | 0.616715 | 8.1:+73596080 | MS.gene59616:CDS |
| GCGAGCTTCCGGAAGGTGTG+AGG | 0.621721 | 8.1:+73596234 | MS.gene59616:CDS |
| GAAGGTGTGAGGCTTAATGA+AGG | 0.623962 | 8.1:+73596245 | MS.gene59616:CDS |
| TGTGAAGCCATGTGTATCGA+TGG | 0.627821 | 8.1:+73596053 | MS.gene59616:CDS |
| CCGAAGAACAAGGGAAAGGG+AGG | 0.634335 | 8.1:+73595918 | MS.gene59616:CDS |
| AATTGGTGGTGGGATTGATG+GGG | 0.634571 | 8.1:+73596268 | MS.gene59616:CDS |
| AGGCTTAATGAAGGAATTGG+TGG | 0.634691 | 8.1:+73596254 | MS.gene59616:CDS |
| TCAACCATGCCGAAGAACAA+GGG | 0.635918 | 8.1:+73595909 | None:intergenic |
| GCGTATAGCGAGCTTCCGGA+AGG | 0.641188 | 8.1:+73596227 | MS.gene59616:CDS |
| AGATGGTCAAGAATACGCAC+AGG | 0.647023 | 8.1:+73596004 | MS.gene59616:CDS |
| TGTGATCTTGAAGTATATGC+CGG | 0.651550 | 8.1:+73596184 | MS.gene59616:CDS |
| AGTATATGCCGGATGAGGCG+AGG | 0.665508 | 8.1:+73596195 | MS.gene59616:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | GAATGATTATATTGAGTTTG+AGG | + | chr8.1:73596310-73596329 | MS.gene59616:CDS | 25.0% |
| TTATATTGAGTTTGAGGATG+AGG | + | chr8.1:73596316-73596335 | MS.gene59616:CDS | 30.0% | |
| CTGGGGATATTATTCTTGTT+GGG | + | chr8.1:73596132-73596151 | MS.gene59616:CDS | 35.0% | |
| TGTGATCTTGAAGTATATGC+CGG | + | chr8.1:73596184-73596203 | MS.gene59616:CDS | 35.0% | |
| ! | TTAATGAAGGAATTGGTGGT+GGG | + | chr8.1:73596258-73596277 | MS.gene59616:CDS | 35.0% |
| AGGCTTAATGAAGGAATTGG+TGG | + | chr8.1:73596254-73596273 | MS.gene59616:CDS | 40.0% | |
| CTTAATGAAGGAATTGGTGG+TGG | + | chr8.1:73596257-73596276 | MS.gene59616:CDS | 40.0% | |
| CTTTGTTCCATCGATACACA+TGG | - | chr8.1:73596063-73596082 | None:intergenic | 40.0% | |
| GAAAGATGCACAAGAAGGTT+TGG | + | chr8.1:73596102-73596121 | MS.gene59616:CDS | 40.0% | |
| GCGTGATTATCAGGATGATA+AGG | + | chr8.1:73596157-73596176 | MS.gene59616:CDS | 40.0% | |
| GCTGGGGATATTATTCTTGT+TGG | + | chr8.1:73596131-73596150 | MS.gene59616:CDS | 40.0% | |
| GTGAGGCTTAATGAAGGAAT+TGG | + | chr8.1:73596251-73596270 | MS.gene59616:CDS | 40.0% | |
| GTTCTTCGTATGCTTGGAAA+CGG | + | chr8.1:73596026-73596045 | MS.gene59616:CDS | 40.0% | |
| ! | ATTGATGGGGATGATGATGA+GGG | + | chr8.1:73596281-73596300 | MS.gene59616:CDS | 40.0% |
| !! | AAAGCGTGAGCTTGTTTTCA+AGG | + | chr8.1:73595980-73595999 | MS.gene59616:CDS | 40.0% |
| !! | GAGCTTGTTTTCAAGGAAGA+TGG | + | chr8.1:73595987-73596006 | MS.gene59616:CDS | 40.0% |
| AAGAAGGTTTGGATTGCTGC+TGG | + | chr8.1:73596113-73596132 | MS.gene59616:CDS | 45.0% | |
| AGAAGGTTTGGATTGCTGCT+GGG | + | chr8.1:73596114-73596133 | MS.gene59616:CDS | 45.0% | |
| AGATGGTCAAGAATACGCAC+AGG | + | chr8.1:73596004-73596023 | MS.gene59616:CDS | 45.0% | |
| ATGCCGAAGAACAAGGGAAA+GGG | + | chr8.1:73595915-73595934 | MS.gene59616:CDS | 45.0% | |
| CCTTCTTGTGCATCTTTCCA+CGG | - | chr8.1:73596100-73596119 | None:intergenic | 45.0% | |
| CTTGAAGTATATGCCGGATG+AGG | + | chr8.1:73596190-73596209 | MS.gene59616:CDS | 45.0% | |
| TCATTAAGCCTCACACCTTC+CGG | - | chr8.1:73596245-73596264 | None:intergenic | 45.0% | |
| TGTGAAGCCATGTGTATCGA+TGG | + | chr8.1:73596053-73596072 | MS.gene59616:CDS | 45.0% | |
| ! | AAGCTCACGCTTTTCGTCAT+CGG | - | chr8.1:73595973-73595992 | None:intergenic | 45.0% |
| ! | GAAGGTGTGAGGCTTAATGA+AGG | + | chr8.1:73596245-73596264 | MS.gene59616:CDS | 45.0% |
| ! | GATTGATGGGGATGATGATG+AGG | + | chr8.1:73596280-73596299 | MS.gene59616:CDS | 45.0% |
| ! | TGTTGGGTTGCGTGATTATC+AGG | + | chr8.1:73596148-73596167 | MS.gene59616:CDS | 45.0% |
| !! | AATTGGTGGTGGGATTGATG+GGG | + | chr8.1:73596268-73596287 | MS.gene59616:CDS | 45.0% |
| !! | GAATTGGTGGTGGGATTGAT+GGG | + | chr8.1:73596267-73596286 | MS.gene59616:CDS | 45.0% |
| AAGCGTCTCTGTCATATCCG+TGG | + | chr8.1:73596080-73596099 | MS.gene59616:CDS | 50.0% | |
| CCGTGGAAAGATGCACAAGA+AGG | + | chr8.1:73596097-73596116 | MS.gene59616:CDS | 50.0% | |
| CCTCCCTTTCCCTTGTTCTT+CGG | - | chr8.1:73595921-73595940 | None:intergenic | 50.0% | |
| GAAGGTTTGGATTGCTGCTG+GGG | + | chr8.1:73596115-73596134 | MS.gene59616:CDS | 50.0% | |
| GCACAGGTTCTTCGTATGCT+TGG | + | chr8.1:73596020-73596039 | MS.gene59616:CDS | 50.0% | |
| GGAGGAAAGAATCGCAAGAG+AGG | + | chr8.1:73595936-73595955 | MS.gene59616:CDS | 50.0% | |
| TTCAACAACCTCGCCTCATC+CGG | - | chr8.1:73596206-73596225 | None:intergenic | 50.0% | |
| ! | GGGATGATGATGAGGGTGAT+GGG | + | chr8.1:73596288-73596307 | MS.gene59616:CDS | 50.0% |
| !! | GGAATTGGTGGTGGGATTGA+TGG | + | chr8.1:73596266-73596285 | MS.gene59616:CDS | 50.0% |
| AGTATATGCCGGATGAGGCG+AGG | + | chr8.1:73596195-73596214 | MS.gene59616:CDS | 55.0% | |
| CCGAAGAACAAGGGAAAGGG+AGG | + | chr8.1:73595918-73595937 | MS.gene59616:CDS | 55.0% | |
| GGATGAGGCGAGGTTGTTGA+AGG | + | chr8.1:73596205-73596224 | MS.gene59616:CDS | 55.0% | |
| ! | GAAGGCGTATAGCGAGCTTC+CGG | + | chr8.1:73596223-73596242 | MS.gene59616:CDS | 55.0% |
| ! | GGGGATGATGATGAGGGTGA+TGG | + | chr8.1:73596287-73596306 | MS.gene59616:CDS | 55.0% |
| GCGTATAGCGAGCTTCCGGA+AGG | + | chr8.1:73596227-73596246 | MS.gene59616:CDS | 60.0% | |
| ! | GCGAGCTTCCGGAAGGTGTG+AGG | + | chr8.1:73596234-73596253 | MS.gene59616:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73595915 | 73596355 | 73595915 | ID=MS.gene59616 |
| chr8.1 | mRNA | 73595915 | 73596355 | 73595915 | ID=MS.gene59616.t1;Parent=MS.gene59616 |
| chr8.1 | exon | 73595915 | 73596355 | 73595915 | ID=MS.gene59616.t1.exon1;Parent=MS.gene59616.t1 |
| chr8.1 | CDS | 73595915 | 73596355 | 73595915 | ID=cds.MS.gene59616.t1;Parent=MS.gene59616.t1 |
| Gene Sequence |
| Protein sequence |
