Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85654.t1 | XP_003603523.2 | 96.7 | 549 | 18 | 0 | 1 | 549 | 47 | 595 | 0.00E+00 | 1114.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85654.t1 | Q38JU2 | 69.3 | 534 | 163 | 1 | 13 | 545 | 40 | 573 | 1.8e-229 | 796.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85654.t1 | G7JCC1 | 96.7 | 549 | 18 | 0 | 1 | 549 | 47 | 595 | 0.0e+00 | 1114.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene85654 | 0.806824 | 6.82E-50 | -1.69E-46 |
| MS.gene049171 | MS.gene85654 | 0.808975 | 2.38E-50 | -1.69E-46 |
| MS.gene049217 | MS.gene85654 | 0.821275 | 4.40E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene85654 | 0.817456 | 3.27E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene85654 | 0.808743 | 2.67E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene85654 | 0.801028 | 1.09E-48 | -1.69E-46 |
| MS.gene049369 | MS.gene85654 | 0.841077 | 5.91E-58 | -1.69E-46 |
| MS.gene049427 | MS.gene85654 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene85654 | 0.834776 | 2.47E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene85654 | 0.850284 | 1.88E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene85654 | 0.802428 | 5.64E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene85654 | 0.813391 | 2.62E-51 | -1.69E-46 |
| MS.gene050538 | MS.gene85654 | 0.822328 | 2.51E-53 | -1.69E-46 |
| MS.gene050593 | MS.gene85654 | 0.830654 | 2.60E-55 | -1.69E-46 |
| MS.gene050647 | MS.gene85654 | -0.80374 | 3.02E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene85654 | 0.811258 | 7.66E-51 | -1.69E-46 |
| MS.gene050747 | MS.gene85654 | 0.832413 | 9.59E-56 | -1.69E-46 |
| MS.gene050772 | MS.gene85654 | 0.847717 | 9.69E-60 | -1.69E-46 |
| MS.gene050809 | MS.gene85654 | -0.814573 | 1.44E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene85654 | 0.834198 | 3.44E-56 | -1.69E-46 |
| MS.gene050812 | MS.gene85654 | 0.838671 | 2.50E-57 | -1.69E-46 |
| MS.gene05081 | MS.gene85654 | 0.869163 | 3.81E-66 | -1.69E-46 |
| MS.gene050868 | MS.gene85654 | 0.808419 | 3.13E-50 | -1.69E-46 |
| MS.gene050871 | MS.gene85654 | 0.80848 | 3.03E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene85654 | 0.841679 | 4.11E-58 | -1.69E-46 |
| MS.gene05105 | MS.gene85654 | 0.840462 | 8.57E-58 | -1.69E-46 |
| MS.gene051255 | MS.gene85654 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene051360 | MS.gene85654 | 0.806761 | 7.03E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene85654 | 0.82673 | 2.31E-54 | -1.69E-46 |
| MS.gene051455 | MS.gene85654 | 0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene051525 | MS.gene85654 | 0.809779 | 1.60E-50 | -1.69E-46 |
| MS.gene051617 | MS.gene85654 | 0.80621 | 9.19E-50 | -1.69E-46 |
| MS.gene051734 | MS.gene85654 | 0.877815 | 4.64E-69 | -1.69E-46 |
| MS.gene051838 | MS.gene85654 | 0.853804 | 1.88E-61 | -1.69E-46 |
| MS.gene051858 | MS.gene85654 | 0.841247 | 5.33E-58 | -1.69E-46 |
| MS.gene051941 | MS.gene85654 | 0.830814 | 2.38E-55 | -1.69E-46 |
| MS.gene052136 | MS.gene85654 | 0.802905 | 4.49E-49 | -1.69E-46 |
| MS.gene052188 | MS.gene85654 | 0.816101 | 6.58E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene85654 | 0.812025 | 5.22E-51 | -1.69E-46 |
| MS.gene052346 | MS.gene85654 | 0.810379 | 1.19E-50 | -1.69E-46 |
| MS.gene052379 | MS.gene85654 | 0.807151 | 5.81E-50 | -1.69E-46 |
| MS.gene052414 | MS.gene85654 | 0.830804 | 2.39E-55 | -1.69E-46 |
| MS.gene052421 | MS.gene85654 | 0.819231 | 1.29E-52 | -1.69E-46 |
| MS.gene052469 | MS.gene85654 | 0.814139 | 1.79E-51 | -1.69E-46 |
| MS.gene052481 | MS.gene85654 | 0.80293 | 4.44E-49 | -1.69E-46 |
| MS.gene052484 | MS.gene85654 | 0.828848 | 7.15E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene85654 | 0.806747 | 7.08E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene85654 | 0.817862 | 2.65E-52 | -1.69E-46 |
| MS.gene052870 | MS.gene85654 | 0.896134 | 4.93E-76 | -1.69E-46 |
| MS.gene052872 | MS.gene85654 | 0.895668 | 7.70E-76 | -1.69E-46 |
| MS.gene052966 | MS.gene85654 | 0.826803 | 2.22E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene85654 | 0.802511 | 5.42E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene85654 | 0.81413 | 1.80E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene85654 | 0.80418 | 2.44E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene85654 | 0.833071 | 6.58E-56 | -1.69E-46 |
| MS.gene053479 | MS.gene85654 | 0.825421 | 4.73E-54 | -1.69E-46 |
| MS.gene053574 | MS.gene85654 | 0.825386 | 4.82E-54 | -1.69E-46 |
| MS.gene053758 | MS.gene85654 | 0.80361 | 3.21E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene85654 | 0.886556 | 3.09E-72 | -1.69E-46 |
| MS.gene053912 | MS.gene85654 | 0.810996 | 8.73E-51 | -1.69E-46 |
| MS.gene053916 | MS.gene85654 | 0.801255 | 9.82E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene85654 | 0.814822 | 1.27E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene85654 | 0.800425 | 1.45E-48 | -1.69E-46 |
| MS.gene054884 | MS.gene85654 | -0.800658 | 1.30E-48 | -1.69E-46 |
| MS.gene054927 | MS.gene85654 | 0.803273 | 3.77E-49 | -1.69E-46 |
| MS.gene05494 | MS.gene85654 | 0.870135 | 1.83E-66 | -1.69E-46 |
| MS.gene05505 | MS.gene85654 | 0.834853 | 2.36E-56 | -1.69E-46 |
| MS.gene055206 | MS.gene85654 | 0.857677 | 1.39E-62 | -1.69E-46 |
| MS.gene055224 | MS.gene85654 | 0.867345 | 1.47E-65 | -1.69E-46 |
| MS.gene055289 | MS.gene85654 | 0.824679 | 7.08E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene85654 | 0.802629 | 5.12E-49 | -1.69E-46 |
| MS.gene055539 | MS.gene85654 | 0.81026 | 1.26E-50 | -1.69E-46 |
| MS.gene055577 | MS.gene85654 | 0.815974 | 7.02E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene85654 | 0.831677 | 1.46E-55 | -1.69E-46 |
| MS.gene055741 | MS.gene85654 | 0.832712 | 8.08E-56 | -1.69E-46 |
| MS.gene055744 | MS.gene85654 | 0.827985 | 1.16E-54 | -1.69E-46 |
| MS.gene05589 | MS.gene85654 | 0.819186 | 1.33E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene85654 | 0.813088 | 3.06E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene85654 | 0.814083 | 1.85E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene85654 | 0.801828 | 7.49E-49 | -1.69E-46 |
| MS.gene055941 | MS.gene85654 | 0.834561 | 2.79E-56 | -1.69E-46 |
| MS.gene056095 | MS.gene85654 | -0.800793 | 1.22E-48 | -1.69E-46 |
| MS.gene056166 | MS.gene85654 | 0.823861 | 1.10E-53 | -1.69E-46 |
| MS.gene056387 | MS.gene85654 | 0.813869 | 2.06E-51 | -1.69E-46 |
| MS.gene056410 | MS.gene85654 | 0.807245 | 5.55E-50 | -1.69E-46 |
| MS.gene056449 | MS.gene85654 | 0.8099 | 1.51E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene85654 | 0.803391 | 3.56E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene85654 | 0.832157 | 1.11E-55 | -1.69E-46 |
| MS.gene056549 | MS.gene85654 | 0.817815 | 2.71E-52 | -1.69E-46 |
| MS.gene056692 | MS.gene85654 | 0.802735 | 4.87E-49 | -1.69E-46 |
| MS.gene056796 | MS.gene85654 | 0.827201 | 1.78E-54 | -1.69E-46 |
| MS.gene056877 | MS.gene85654 | 0.81172 | 6.08E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene85654 | 0.8322 | 1.08E-55 | -1.69E-46 |
| MS.gene056947 | MS.gene85654 | 0.801474 | 8.85E-49 | -1.69E-46 |
| MS.gene057019 | MS.gene85654 | 0.825994 | 3.46E-54 | -1.69E-46 |
| MS.gene057076 | MS.gene85654 | 0.842718 | 2.18E-58 | -1.69E-46 |
| MS.gene057331 | MS.gene85654 | 0.827063 | 1.92E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene85654 | 0.816385 | 5.68E-52 | -1.69E-46 |
| MS.gene057658 | MS.gene85654 | 0.823191 | 1.58E-53 | -1.69E-46 |
| MS.gene057856 | MS.gene85654 | 0.801143 | 1.03E-48 | -1.69E-46 |
| MS.gene058007 | MS.gene85654 | 0.814562 | 1.45E-51 | -1.69E-46 |
| MS.gene05806 | MS.gene85654 | 0.808014 | 3.81E-50 | -1.69E-46 |
| MS.gene058120 | MS.gene85654 | 0.840773 | 7.10E-58 | -1.69E-46 |
| MS.gene058130 | MS.gene85654 | 0.816442 | 5.52E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene85654 | 0.858261 | 9.30E-63 | -1.69E-46 |
| MS.gene058376 | MS.gene85654 | 0.825283 | 5.10E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene85654 | 0.845039 | 5.21E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene85654 | 0.801918 | 7.18E-49 | -1.69E-46 |
| MS.gene058444 | MS.gene85654 | 0.836376 | 9.70E-57 | -1.69E-46 |
| MS.gene058700 | MS.gene85654 | 0.830376 | 3.04E-55 | -1.69E-46 |
| MS.gene058773 | MS.gene85654 | 0.804111 | 2.53E-49 | -1.69E-46 |
| MS.gene058838 | MS.gene85654 | 0.828654 | 7.97E-55 | -1.69E-46 |
| MS.gene05883 | MS.gene85654 | 0.807104 | 5.95E-50 | -1.69E-46 |
| MS.gene058948 | MS.gene85654 | 0.811277 | 7.59E-51 | -1.69E-46 |
| MS.gene059023 | MS.gene85654 | 0.852154 | 5.56E-61 | -1.69E-46 |
| MS.gene05913 | MS.gene85654 | 0.813003 | 3.19E-51 | -1.69E-46 |
| MS.gene059305 | MS.gene85654 | 0.827964 | 1.17E-54 | -1.69E-46 |
| MS.gene05934 | MS.gene85654 | 0.861628 | 8.97E-64 | -1.69E-46 |
| MS.gene059536 | MS.gene85654 | 0.81838 | 2.02E-52 | -1.69E-46 |
| MS.gene059674 | MS.gene85654 | 0.819278 | 1.26E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene85654 | 0.805102 | 1.57E-49 | -1.69E-46 |
| MS.gene059688 | MS.gene85654 | 0.812096 | 5.03E-51 | -1.69E-46 |
| MS.gene059711 | MS.gene85654 | 0.812541 | 4.02E-51 | -1.69E-46 |
| MS.gene059801 | MS.gene85654 | 0.801517 | 8.67E-49 | -1.69E-46 |
| MS.gene059902 | MS.gene85654 | 0.83348 | 5.20E-56 | -1.69E-46 |
| MS.gene059960 | MS.gene85654 | 0.801032 | 1.09E-48 | -1.69E-46 |
| MS.gene060762 | MS.gene85654 | 0.823673 | 1.22E-53 | -1.69E-46 |
| MS.gene060804 | MS.gene85654 | 0.808897 | 2.47E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene85654 | 0.825864 | 3.71E-54 | -1.69E-46 |
| MS.gene060832 | MS.gene85654 | 0.800841 | 1.19E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene85654 | 0.840702 | 7.42E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene85654 | 0.849805 | 2.55E-60 | -1.69E-46 |
| MS.gene06092 | MS.gene85654 | 0.831936 | 1.26E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene85654 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene85654 | 0.814746 | 1.32E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene85654 | 0.83983 | 1.25E-57 | -1.69E-46 |
| MS.gene061231 | MS.gene85654 | 0.826638 | 2.43E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85654.t1 | MTR_3g108700 | 96.721 | 549 | 18 | 0 | 1 | 549 | 47 | 595 | 0.0 | 1117 |
| MS.gene85654.t1 | MTR_1g088420 | 34.367 | 387 | 208 | 10 | 5 | 366 | 74 | 439 | 3.52e-60 | 206 |
| MS.gene85654.t1 | MTR_4g011370 | 28.392 | 479 | 303 | 13 | 37 | 500 | 1 | 454 | 5.65e-40 | 152 |
| MS.gene85654.t1 | MTR_4g011370 | 28.452 | 478 | 302 | 13 | 38 | 500 | 2 | 454 | 5.73e-40 | 152 |
| MS.gene85654.t1 | MTR_4g011370 | 26.625 | 477 | 288 | 13 | 38 | 500 | 2 | 430 | 5.98e-32 | 129 |
| MS.gene85654.t1 | MTR_1g043190 | 27.254 | 477 | 291 | 15 | 52 | 508 | 4 | 444 | 7.55e-28 | 118 |
| MS.gene85654.t1 | MTR_1g076190 | 28.631 | 482 | 276 | 19 | 53 | 508 | 7 | 446 | 3.56e-25 | 110 |
| MS.gene85654.t1 | MTR_1g076190 | 28.631 | 482 | 276 | 19 | 53 | 508 | 7 | 446 | 4.34e-25 | 110 |
| MS.gene85654.t1 | MTR_5g063920 | 41.538 | 130 | 75 | 1 | 380 | 508 | 155 | 284 | 1.14e-17 | 86.7 |
| MS.gene85654.t1 | MTR_5g063920 | 41.538 | 130 | 75 | 1 | 380 | 508 | 319 | 448 | 1.29e-17 | 86.7 |
| MS.gene85654.t1 | MTR_5g063920 | 41.538 | 130 | 75 | 1 | 380 | 508 | 319 | 448 | 1.29e-17 | 86.7 |
| MS.gene85654.t1 | MTR_4g036495 | 24.513 | 359 | 171 | 11 | 47 | 339 | 34 | 358 | 3.88e-15 | 79.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85654.t1 | AT5G24850 | 69.720 | 535 | 143 | 4 | 17 | 547 | 48 | 567 | 0.0 | 777 |
| MS.gene85654.t1 | AT2G47590 | 37.758 | 339 | 171 | 10 | 55 | 373 | 120 | 438 | 3.70e-59 | 203 |
| MS.gene85654.t1 | AT3G15620 | 30.185 | 487 | 302 | 14 | 31 | 501 | 6 | 470 | 4.11e-45 | 167 |
| MS.gene85654.t1 | AT3G15620 | 30.493 | 446 | 272 | 14 | 31 | 460 | 6 | 429 | 6.05e-39 | 148 |
| MS.gene85654.t1 | AT1G04400 | 27.869 | 488 | 271 | 21 | 53 | 506 | 8 | 448 | 2.66e-25 | 110 |
| MS.gene85654.t1 | AT1G04400 | 27.869 | 488 | 271 | 21 | 53 | 506 | 8 | 448 | 2.66e-25 | 110 |
| MS.gene85654.t1 | AT4G08920 | 40.769 | 130 | 76 | 1 | 380 | 508 | 324 | 453 | 6.08e-19 | 90.9 |
| MS.gene85654.t1 | AT4G25290 | 30.374 | 214 | 106 | 10 | 51 | 257 | 36 | 213 | 2.02e-13 | 73.6 |
Find 142 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCTCTAGTTAAAGCTTA+TGG | 0.210011 | 3.3:-88850520 | MS.gene85654:CDS |
| TATGATCCATGTTCTAATTA+TGG | 0.211165 | 3.3:-88847614 | MS.gene85654:CDS |
| GCCCCAAACAAACTGTAATT+TGG | 0.214415 | 3.3:+88850230 | None:intergenic |
| ACCACTCCTCTTGGTGTTAT+TGG | 0.215639 | 3.3:+88851535 | None:intergenic |
| AGGCCCTAACATCCCATTTC+GGG | 0.262358 | 3.3:+88848965 | None:intergenic |
| TTCCTTCCTAGTTCGTGATA+TGG | 0.276629 | 3.3:-88847687 | MS.gene85654:CDS |
| TGCTATGGAGGGATTACTTT+AGG | 0.277607 | 3.3:-88848383 | MS.gene85654:CDS |
| TCATAGACACTTACTTGTTT+TGG | 0.288360 | 3.3:+88847223 | None:intergenic |
| AATTATGGAAACTGGACTTA+TGG | 0.288686 | 3.3:-88847599 | MS.gene85654:CDS |
| ACAATTTCTCCTTGAATGTT+TGG | 0.290513 | 3.3:-88850617 | MS.gene85654:CDS |
| CAAATTGTGCCTCTCAAGTT+TGG | 0.291317 | 3.3:-88846991 | MS.gene85654:CDS |
| ACCCCAAATTACAGTTTGTT+TGG | 0.297200 | 3.3:-88850233 | MS.gene85654:CDS |
| TAGAAACGATCTCAGAGTTT+TGG | 0.300537 | 3.3:-88851489 | MS.gene85654:CDS |
| GCAGAATATATGAATACTTT+TGG | 0.304882 | 3.3:-88849452 | MS.gene85654:CDS |
| CCCCAAATTACAGTTTGTTT+GGG | 0.309463 | 3.3:-88850232 | MS.gene85654:CDS |
| TCTTCCTTCATTGGAGCTGC+TGG | 0.313360 | 3.3:-88849653 | MS.gene85654:CDS |
| GAGACCCGAAATGGGATGTT+AGG | 0.314710 | 3.3:-88848969 | MS.gene85654:CDS |
| TATGCAACATATTCACCTTC+TGG | 0.320195 | 3.3:+88847081 | None:intergenic |
| AGGTTTCTATCAGTCAAATA+TGG | 0.320199 | 3.3:-88848363 | MS.gene85654:CDS |
| TTTGCAACCACTTACCATTT+CGG | 0.320810 | 3.3:-88851392 | MS.gene85654:CDS |
| ATGGTTTGAGACATGTCTTT+TGG | 0.325858 | 3.3:-88847639 | MS.gene85654:CDS |
| AGATGCTGAGGGTTCGGATT+TGG | 0.332286 | 3.3:+88851640 | None:intergenic |
| CCCCAAACAAACTGTAATTT+GGG | 0.334412 | 3.3:+88850231 | None:intergenic |
| TTGGGGATGTCTTCCTTCAT+TGG | 0.335648 | 3.3:-88849662 | MS.gene85654:CDS |
| TTGAACAACCCATACCTATA+TGG | 0.349032 | 3.3:+88848328 | None:intergenic |
| CGACTAGTAGACATAATAAT+GGG | 0.355841 | 3.3:-88846966 | MS.gene85654:CDS |
| GAGGCCCTAACATCCCATTT+CGG | 0.356933 | 3.3:+88848964 | None:intergenic |
| TCCTTCCTAGTTCGTGATAT+GGG | 0.370362 | 3.3:-88847686 | MS.gene85654:CDS |
| CATGTTCTAATTATGGAAAC+TGG | 0.376771 | 3.3:-88847607 | MS.gene85654:CDS |
| CGAAGAAGATGCTGAGGGTT+CGG | 0.386786 | 3.3:+88851634 | None:intergenic |
| AGACATCCCCAATCCTCAAT+TGG | 0.387677 | 3.3:+88849673 | None:intergenic |
| GACATCCCCAATCCTCAATT+GGG | 0.392767 | 3.3:+88849674 | None:intergenic |
| AAGTGTACCTTTGGAATGTT+TGG | 0.395594 | 3.3:+88851558 | None:intergenic |
| GAGGAAGAATCTAATGAAAC+GGG | 0.397025 | 3.3:-88850587 | MS.gene85654:CDS |
| CTTCTTCTGAATCAGGAGTC+GGG | 0.411886 | 3.3:-88847279 | MS.gene85654:intron |
| TCCTGGAGAGATGGTTGTAC+AGG | 0.423794 | 3.3:-88848079 | MS.gene85654:CDS |
| ACGACTAGTAGACATAATAA+TGG | 0.424104 | 3.3:-88846967 | MS.gene85654:CDS |
| CGAGGATCAATACAATAAAC+AGG | 0.433338 | 3.3:+88851419 | None:intergenic |
| CGAAATTGAGTATAAACATC+TGG | 0.434912 | 3.3:+88850159 | None:intergenic |
| CGTACCTTTACCACTCCTCT+TGG | 0.440611 | 3.3:+88851526 | None:intergenic |
| GTACCATCTGACGGATCCGC+TGG | 0.440891 | 3.3:-88850279 | MS.gene85654:CDS |
| CTTCCTTCATTGGAGCTGCT+GGG | 0.442472 | 3.3:-88849652 | MS.gene85654:CDS |
| GGCAAACAAGTGACATCAAA+AGG | 0.455437 | 3.3:+88850180 | None:intergenic |
| TTCTCGCCATGGCTTGCATC+CGG | 0.458764 | 3.3:-88848927 | MS.gene85654:CDS |
| TGTTATTGGAAGTGTACCTT+TGG | 0.459247 | 3.3:+88851549 | None:intergenic |
| ATGCAACATATTCACCTTCT+GGG | 0.459620 | 3.3:+88847082 | None:intergenic |
| CTGAAATATCGGTCTTCTCT+AGG | 0.465039 | 3.3:+88847250 | None:intergenic |
| CCTCTTGATGTAGGTTAACA+AGG | 0.467398 | 3.3:-88849511 | MS.gene85654:intron |
| AGAAACTTGTAGCGAAGAGC+TGG | 0.468024 | 3.3:-88850343 | MS.gene85654:CDS |
| AGAGCTAGACTCTAACGAAA+TGG | 0.468049 | 3.3:-88851594 | MS.gene85654:CDS |
| TTTGGTTCACCTGCCGTCCT+CGG | 0.476541 | 3.3:+88847833 | None:intergenic |
| TGAGGAAGAATCTAATGAAA+CGG | 0.480156 | 3.3:-88850588 | MS.gene85654:CDS |
| GGAGGTGGTCCAAGTGATGT+TGG | 0.482437 | 3.3:+88849697 | None:intergenic |
| TCAAGTCATCCAAACATTCA+AGG | 0.483691 | 3.3:+88850608 | None:intergenic |
| AGAGAAGGAAGAATATCTTC+AGG | 0.484237 | 3.3:+88850535 | None:intergenic |
| GAGACGAGGAGACAAGCTTC+CGG | 0.491196 | 3.3:+88848908 | None:intergenic |
| GTATATAAAGAGACCCGAAA+TGG | 0.496103 | 3.3:-88848978 | MS.gene85654:CDS |
| TATATAAAGAGACCCGAAAT+GGG | 0.502225 | 3.3:-88848977 | MS.gene85654:CDS |
| AGACCCGAAATGGGATGTTA+GGG | 0.502463 | 3.3:-88848968 | MS.gene85654:CDS |
| ATGAAACTCTCTACAAGGCT+TGG | 0.505319 | 3.3:-88851463 | MS.gene85654:CDS |
| CAGTTTGATGCATGAGCGCA+CGG | 0.505741 | 3.3:+88849720 | None:intergenic |
| CTATGCCCATATCACGAACT+AGG | 0.509979 | 3.3:+88847681 | None:intergenic |
| ATCAAACTGCCAACATCACT+TGG | 0.510630 | 3.3:-88849706 | MS.gene85654:CDS |
| CCCTGTACAACCATCTCTCC+AGG | 0.511372 | 3.3:+88848078 | None:intergenic |
| GGAAACTGGACTTATGGATC+AGG | 0.511438 | 3.3:-88847593 | MS.gene85654:intron |
| TGGAAATCCGAAATGGTAAG+TGG | 0.513053 | 3.3:+88851385 | None:intergenic |
| TGCTGAGGGTTCGGATTTGG+TGG | 0.513186 | 3.3:+88851643 | None:intergenic |
| ATAGACGAAATGAAAGAAGA+TGG | 0.513267 | 3.3:-88846912 | MS.gene85654:CDS |
| TAACAAGGGGATGAAATTTG+TGG | 0.514047 | 3.3:-88849496 | MS.gene85654:CDS |
| ATGAAAGAATTATCCACTAC+AGG | 0.515721 | 3.3:-88847868 | MS.gene85654:CDS |
| TTCGTGATATGGGCATAGAT+TGG | 0.517775 | 3.3:-88847676 | MS.gene85654:CDS |
| ATTTCGTTAGAGTCTAGCTC+TGG | 0.518530 | 3.3:+88851596 | None:intergenic |
| CTTAATTTGCTTATTCAACA+TGG | 0.522203 | 3.3:-88850562 | MS.gene85654:CDS |
| CCATAAGCTTTAACTAGAGA+AGG | 0.528104 | 3.3:+88850520 | None:intergenic |
| GGATAATGAAACTCTCTACA+AGG | 0.529318 | 3.3:-88851468 | MS.gene85654:CDS |
| TACCATCTGACGGATCCGCT+GGG | 0.531631 | 3.3:-88850278 | MS.gene85654:CDS |
| TATGTCAAACCGAGGACGGC+AGG | 0.534240 | 3.3:-88847842 | MS.gene85654:intron |
| TGTTTATACTCAATTTCGTA+AGG | 0.534752 | 3.3:-88850154 | MS.gene85654:intron |
| GAAATGAAAGAAGATGGAAC+AGG | 0.535065 | 3.3:-88846906 | MS.gene85654:CDS |
| AAGCAAATAGTTCTACCTAC+TGG | 0.538920 | 3.3:-88848760 | MS.gene85654:intron |
| TTATTTGAATCCTGGAGAGA+TGG | 0.539657 | 3.3:-88848088 | MS.gene85654:CDS |
| AACACCAAGAGGAGTGGTAA+AGG | 0.541108 | 3.3:-88851530 | MS.gene85654:CDS |
| AACAAGGGGATGAAATTTGT+GGG | 0.551545 | 3.3:-88849495 | MS.gene85654:CDS |
| ATGGGCATAGATTGGCGCAT+GGG | 0.552805 | 3.3:-88847668 | MS.gene85654:CDS |
| CAGTTTCCATAATTAGAACA+TGG | 0.556417 | 3.3:+88847608 | None:intergenic |
| AGTCCCAGCAGCTCCAATGA+AGG | 0.560441 | 3.3:+88849649 | None:intergenic |
| GCCCCAGCGGATCCGTCAGA+TGG | 0.561396 | 3.3:+88850276 | None:intergenic |
| TTTGTTCGAGTTGCTATGGA+GGG | 0.563442 | 3.3:-88848394 | MS.gene85654:CDS |
| CAACAAATGTCTTCAACAAG+TGG | 0.563963 | 3.3:-88850304 | MS.gene85654:CDS |
| ATTCTACTAAATTCTCGCCA+TGG | 0.564320 | 3.3:-88848938 | MS.gene85654:CDS |
| CTCTAACGAAATGGAAAGTG+TGG | 0.567651 | 3.3:-88851585 | MS.gene85654:CDS |
| AAGCTTCCGGATGCAAGCCA+TGG | 0.569250 | 3.3:+88848921 | None:intergenic |
| TGACGAATGTATAAATTACC+AGG | 0.571431 | 3.3:+88847012 | None:intergenic |
| TTGAATGTTTGGATGACTTG+AGG | 0.576608 | 3.3:-88850606 | MS.gene85654:CDS |
| TTCATGTTTGCATCTATCAG+AGG | 0.578477 | 3.3:+88847886 | None:intergenic |
| CTCTTGATGTAGGTTAACAA+GGG | 0.580869 | 3.3:-88849510 | MS.gene85654:intron |
| ATCTGACGGATCCGCTGGGG+CGG | 0.582363 | 3.3:-88850274 | MS.gene85654:CDS |
| TTTGAGATTGCTCTTAACTG+TGG | 0.587745 | 3.3:+88847051 | None:intergenic |
| AATAATGGGGACAAGTCACT+TGG | 0.587812 | 3.3:-88846952 | MS.gene85654:CDS |
| ACATGTGTAGGATTTACTAA+AGG | 0.591572 | 3.3:-88849000 | MS.gene85654:intron |
| GTTTGACATAAATCCTGTAG+TGG | 0.595088 | 3.3:+88847855 | None:intergenic |
| TCCAATAACACCAAGAGGAG+TGG | 0.596699 | 3.3:-88851536 | MS.gene85654:CDS |
| ATTGGCGCATGGGAGCAGAA+TGG | 0.597062 | 3.3:-88847658 | MS.gene85654:CDS |
| CAAGGGGATGAAATTTGTGG+GGG | 0.600118 | 3.3:-88849493 | MS.gene85654:CDS |
| GCGAAGAGCTGGATGTTGAA+AGG | 0.601181 | 3.3:-88850332 | MS.gene85654:CDS |
| GCCCATATCACGAACTAGGA+AGG | 0.603994 | 3.3:+88847685 | None:intergenic |
| CCCAAATTACAGTTTGTTTG+GGG | 0.604032 | 3.3:-88850231 | MS.gene85654:CDS |
| CAAGAGGAGTGGTAAAGGTA+CGG | 0.605224 | 3.3:-88851525 | MS.gene85654:CDS |
| AAGTCACTTGGTGCAAGAAG+AGG | 0.607529 | 3.3:-88846940 | MS.gene85654:CDS |
| TCCTCGTCTCATACACGAAG+AGG | 0.611751 | 3.3:-88848895 | MS.gene85654:intron |
| GATTTATGTCAAACCGAGGA+CGG | 0.614401 | 3.3:-88847846 | MS.gene85654:CDS |
| CTAGTCGTTCCAAACTTGAG+AGG | 0.615978 | 3.3:+88846982 | None:intergenic |
| CCTGGAGAGATGGTTGTACA+GGG | 0.618293 | 3.3:-88848078 | MS.gene85654:intron |
| CATTGACGAAGAAGATGCTG+AGG | 0.621299 | 3.3:+88851628 | None:intergenic |
| ACATCCCCAATCCTCAATTG+GGG | 0.626215 | 3.3:+88849675 | None:intergenic |
| TCTTGATGTAGGTTAACAAG+GGG | 0.628429 | 3.3:-88849509 | MS.gene85654:intron |
| GAGAATTTAGTAGAATAATG+AGG | 0.633562 | 3.3:+88848945 | None:intergenic |
| ACCTCTTCGTGTATGAGACG+AGG | 0.647738 | 3.3:+88848894 | None:intergenic |
| TATGGGCATAGATTGGCGCA+TGG | 0.647937 | 3.3:-88847669 | MS.gene85654:CDS |
| AGAAGCTGATGCCGCCCCAG+CGG | 0.648296 | 3.3:+88850263 | None:intergenic |
| AAGGTGAATATGTTGCATAC+TGG | 0.650078 | 3.3:-88847077 | MS.gene85654:CDS |
| AAACAAACTGTAATTTGGGG+TGG | 0.651990 | 3.3:+88850235 | None:intergenic |
| ATCGTCACGGTGGTACATAG+TGG | 0.665558 | 3.3:+88850206 | None:intergenic |
| ACAAGGGGATGAAATTTGTG+GGG | 0.671142 | 3.3:-88849494 | MS.gene85654:CDS |
| ACCATCTGACGGATCCGCTG+GGG | 0.671352 | 3.3:-88850277 | MS.gene85654:CDS |
| TGGCAAACCAAACATTCCAA+AGG | 0.672634 | 3.3:-88851565 | MS.gene85654:CDS |
| GGCAAAACCTACATTCTGTG+AGG | 0.676529 | 3.3:+88849624 | None:intergenic |
| TAAGTGGTTGCAAATAGTCG+AGG | 0.676581 | 3.3:+88851401 | None:intergenic |
| GCACAAACATATGACCCAGA+AGG | 0.677856 | 3.3:-88847096 | MS.gene85654:CDS |
| ACACTTCCAATAACACCAAG+AGG | 0.681084 | 3.3:-88851541 | MS.gene85654:CDS |
| CCCAAACAAACTGTAATTTG+GGG | 0.681742 | 3.3:+88850232 | None:intergenic |
| TTCATATATTCTGCTCAATG+CGG | 0.686672 | 3.3:+88849461 | None:intergenic |
| CATCAAAAGGAAGATCGTCA+CGG | 0.693138 | 3.3:+88850193 | None:intergenic |
| GTAAAGGTACGGCAATCGTG+TGG | 0.694715 | 3.3:-88851514 | MS.gene85654:CDS |
| ATTGACGAAGAAGATGCTGA+GGG | 0.697365 | 3.3:+88851629 | None:intergenic |
| AAGGGGATGAAATTTGTGGG+GGG | 0.704567 | 3.3:-88849492 | MS.gene85654:CDS |
| CAAGTGGTAGTACCATCTGA+CGG | 0.705025 | 3.3:-88850288 | MS.gene85654:CDS |
| CATCCCCAATCCTCAATTGG+GGG | 0.713592 | 3.3:+88849676 | None:intergenic |
| GACTAGTAGACATAATAATG+GGG | 0.715600 | 3.3:-88846965 | MS.gene85654:CDS |
| AGGAAGAATCTAATGAAACG+GGG | 0.715617 | 3.3:-88850586 | MS.gene85654:CDS |
| ACAGGATTTATGTCAAACCG+AGG | 0.734188 | 3.3:-88847850 | MS.gene85654:CDS |
| CAAAAGGAAGATCGTCACGG+TGG | 0.770417 | 3.3:+88850196 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCAGTAAATTTTTAAATT+TGG | - | chr3.3:88851403-88851422 | MS.gene85654:CDS | 10.0% |
| !!! | TTTTCCAATTAAAATAATTA+GGG | - | chr3.3:88847487-88847506 | MS.gene85654:intron | 10.0% |
| !!! | TTTTTCCAATTAAAATAATT+AGG | - | chr3.3:88847486-88847505 | MS.gene85654:intron | 10.0% |
| !! | AAATAAGATAAAATCAAGTA+TGG | + | chr3.3:88848560-88848579 | None:intergenic | 15.0% |
| !! | TAGATTTATATGGATTTATT+TGG | - | chr3.3:88848452-88848471 | MS.gene85654:intron | 15.0% |
| !! | TTCATTGTTTAAAGAATTTA+TGG | + | chr3.3:88851229-88851248 | None:intergenic | 15.0% |
| !! | TTTAACTATAAATGTTATGT+TGG | - | chr3.3:88849160-88849179 | MS.gene85654:intron | 15.0% |
| !!! | ATTAAATCTACATTTTCATT+TGG | + | chr3.3:88849238-88849257 | None:intergenic | 15.0% |
| !!! | ATTCAAATAATTTTTTGTCT+TGG | + | chr3.3:88850458-88850477 | None:intergenic | 15.0% |
| !!! | GAATTACTTTAAAGAATTTA+TGG | + | chr3.3:88851118-88851137 | None:intergenic | 15.0% |
| !!! | TTTACCCTAATTATTTTAAT+TGG | + | chr3.3:88847494-88847513 | None:intergenic | 15.0% |
| !! | AACATTTAAATTTACCTAAC+AGG | + | chr3.3:88847409-88847428 | None:intergenic | 20.0% |
| !! | AACTTATTTAAGCTTATCTA+CGG | - | chr3.3:88848478-88848497 | MS.gene85654:intron | 20.0% |
| !! | ACAAAAAATTATTTGAATCC+TGG | - | chr3.3:88850460-88850479 | MS.gene85654:intron | 20.0% |
| !! | ATTATAACAAAAAGGTTCTA+TGG | + | chr3.3:88850361-88850380 | None:intergenic | 20.0% |
| !! | GACATATTAAAAAATCTACA+AGG | + | chr3.3:88851074-88851093 | None:intergenic | 20.0% |
| !! | GCATCAATTATCATAAAATT+TGG | + | chr3.3:88848135-88848154 | None:intergenic | 20.0% |
| !! | TAGACAGTTAAATAATTACA+CGG | - | chr3.3:88850076-88850095 | MS.gene85654:intron | 20.0% |
| !! | TCCTAAATTAACTCATTATT+CGG | + | chr3.3:88849288-88849307 | None:intergenic | 20.0% |
| !! | TTTATTAACAGAAAGAAATG+TGG | + | chr3.3:88851048-88851067 | None:intergenic | 20.0% |
| !!! | TCACAATTTACTTTGAAATA+TGG | - | chr3.3:88851362-88851381 | MS.gene85654:intron | 20.0% |
| !!! | TCTATTTTTGAAATTATTCC+CGG | + | chr3.3:88847275-88847294 | None:intergenic | 20.0% |
| ! | AACAGACAATACTTTATCAA+AGG | + | chr3.3:88849743-88849762 | None:intergenic | 25.0% |
| ! | AATTGTGTGCAACATAAAAT+AGG | - | chr3.3:88849412-88849431 | MS.gene85654:intron | 25.0% |
| ! | AGAAACACATTAATGTACTT+TGG | + | chr3.3:88850744-88850763 | None:intergenic | 25.0% |
| ! | ATAATTAGGGTAAAAATGAG+AGG | - | chr3.3:88847500-88847519 | MS.gene85654:intron | 25.0% |
| ! | ATGATAATTGATGCATCTTT+AGG | - | chr3.3:88848141-88848160 | MS.gene85654:intron | 25.0% |
| ! | CAAGATCTAAAAATATAGTG+TGG | - | chr3.3:88849492-88849511 | MS.gene85654:CDS | 25.0% |
| ! | CATGTGTGTTTAGATTTATA+TGG | - | chr3.3:88848442-88848461 | MS.gene85654:intron | 25.0% |
| ! | CTAGAAATGTTCAGAAAAAT+TGG | - | chr3.3:88850430-88850449 | MS.gene85654:intron | 25.0% |
| ! | GAAATTTAGTGACAAAGAAA+GGG | - | chr3.3:88849973-88849992 | MS.gene85654:intron | 25.0% |
| ! | GAATTAAAGAATGAATAGCT+TGG | + | chr3.3:88850035-88850054 | None:intergenic | 25.0% |
| ! | GAATTAATGTTAGTCATGAT+GGG | - | chr3.3:88849182-88849201 | MS.gene85654:intron | 25.0% |
| ! | GAGAATTTAGTAGAATAATG+AGG | + | chr3.3:88849614-88849633 | None:intergenic | 25.0% |
| ! | GCAACATAAAATAGGAAAAA+GGG | - | chr3.3:88849420-88849439 | MS.gene85654:intron | 25.0% |
| ! | TATGATCCATGTTCTAATTA+TGG | - | chr3.3:88850942-88850961 | MS.gene85654:intron | 25.0% |
| ! | TATGGACAACATAATAATGT+TGG | + | chr3.3:88851100-88851119 | None:intergenic | 25.0% |
| ! | TCCGAATAATGAGTTAATTT+AGG | - | chr3.3:88849284-88849303 | MS.gene85654:intron | 25.0% |
| ! | TGAATATCTTAATTAAGTCC+CGG | + | chr3.3:88849474-88849493 | None:intergenic | 25.0% |
| ! | TGATAATTGATGCATCTTTA+GGG | - | chr3.3:88848142-88848161 | MS.gene85654:intron | 25.0% |
| ! | TGCAACATAAAATAGGAAAA+AGG | - | chr3.3:88849419-88849438 | MS.gene85654:intron | 25.0% |
| ! | TGTTTATACTCAATTTCGTA+AGG | - | chr3.3:88848402-88848421 | MS.gene85654:intron | 25.0% |
| ! | TTAAGGAAAGAAAAACTAAC+AGG | - | chr3.3:88850002-88850021 | MS.gene85654:intron | 25.0% |
| ! | TTATGGATCAGGTAAATATT+TGG | - | chr3.3:88850974-88850993 | MS.gene85654:intron | 25.0% |
| !! | AATAAGCTAGTTTAGATTGA+TGG | - | chr3.3:88848104-88848123 | MS.gene85654:CDS | 25.0% |
| !! | CAATTTTTCTGAACATTTCT+AGG | + | chr3.3:88850432-88850451 | None:intergenic | 25.0% |
| !! | GCAGAATATATGAATACTTT+TGG | - | chr3.3:88849104-88849123 | MS.gene85654:intron | 25.0% |
| !! | TACATTTTCATTTGGAGATA+AGG | + | chr3.3:88849230-88849249 | None:intergenic | 25.0% |
| !! | TAGATTGAAGGTGTATTATT+TGG | + | chr3.3:88847784-88847803 | None:intergenic | 25.0% |
| !! | TGTAGTCTTTATTTCTTTGT+AGG | - | chr3.3:88850402-88850421 | MS.gene85654:intron | 25.0% |
| !! | TTTTTCATTGTTGAGTTCAA+AGG | + | chr3.3:88848997-88849016 | None:intergenic | 25.0% |
| !!! | AACTTCTTTGTTTGTTTTGT+TGG | - | chr3.3:88847831-88847850 | MS.gene85654:intron | 25.0% |
| !!! | ATATGAATACTTTTGGAAGA+AGG | - | chr3.3:88849111-88849130 | MS.gene85654:intron | 25.0% |
| !!! | CTTAATTTGCTTATTCAACA+TGG | - | chr3.3:88847994-88848013 | MS.gene85654:intron | 25.0% |
| !!! | TTTTAAATTTGGTTCTGATG+TGG | - | chr3.3:88851414-88851433 | MS.gene85654:CDS | 25.0% |
| AAACCCTGTGAAAATAAAGA+CGG | + | chr3.3:88850144-88850163 | None:intergenic | 30.0% | |
| AAAGAAAAAAGGAACTTTCC+TGG | - | chr3.3:88851526-88851545 | MS.gene85654:CDS | 30.0% | |
| AACACACAATCTGTCAAAAA+AGG | + | chr3.3:88850851-88850870 | None:intergenic | 30.0% | |
| AATTATGGAAACTGGACTTA+TGG | - | chr3.3:88850957-88850976 | MS.gene85654:intron | 30.0% | |
| ACAATTTCTCCTTGAATGTT+TGG | - | chr3.3:88847939-88847958 | MS.gene85654:intron | 30.0% | |
| ACACACAATCTGTCAAAAAA+GGG | + | chr3.3:88850850-88850869 | None:intergenic | 30.0% | |
| ACACTAACACATTAGATTGA+AGG | + | chr3.3:88847796-88847815 | None:intergenic | 30.0% | |
| ACATGTGTAGGATTTACTAA+AGG | - | chr3.3:88849556-88849575 | MS.gene85654:intron | 30.0% | |
| ACCTTCATGTTTACTCAAAA+AGG | + | chr3.3:88849325-88849344 | None:intergenic | 30.0% | |
| ACGACTAGTAGACATAATAA+TGG | - | chr3.3:88851589-88851608 | MS.gene85654:CDS | 30.0% | |
| AGGTTTCTATCAGTCAAATA+TGG | - | chr3.3:88850193-88850212 | MS.gene85654:CDS | 30.0% | |
| AGTGAAGAAAAAGTCAATAC+AGG | + | chr3.3:88850629-88850648 | None:intergenic | 30.0% | |
| ATAGACGAAATGAAAGAAGA+TGG | - | chr3.3:88851644-88851663 | MS.gene85654:CDS | 30.0% | |
| ATGAAACAAGAATATACCTC+CGG | + | chr3.3:88847201-88847220 | None:intergenic | 30.0% | |
| ATGAAAGAATTATCCACTAC+AGG | - | chr3.3:88850688-88850707 | MS.gene85654:intron | 30.0% | |
| CAGTTTCCATAATTAGAACA+TGG | + | chr3.3:88850951-88850970 | None:intergenic | 30.0% | |
| CATGTTCTAATTATGGAAAC+TGG | - | chr3.3:88850949-88850968 | MS.gene85654:intron | 30.0% | |
| CCTTCATGTTTACTCAAAAA+GGG | + | chr3.3:88849324-88849343 | None:intergenic | 30.0% | |
| CGAAATTGAGTATAAACATC+TGG | + | chr3.3:88848400-88848419 | None:intergenic | 30.0% | |
| CGAAATTTAGTGACAAAGAA+AGG | - | chr3.3:88849972-88849991 | MS.gene85654:intron | 30.0% | |
| CGACTAGTAGACATAATAAT+GGG | - | chr3.3:88851590-88851609 | MS.gene85654:CDS | 30.0% | |
| CTTCATGTTTACTCAAAAAG+GGG | + | chr3.3:88849323-88849342 | None:intergenic | 30.0% | |
| GAAGAAAAAGTAAGAGAGTA+TGG | + | chr3.3:88851261-88851280 | None:intergenic | 30.0% | |
| GAAGTGACTGAAACTTTATT+CGG | - | chr3.3:88847293-88847312 | MS.gene85654:intron | 30.0% | |
| GACTAGTAGACATAATAATG+GGG | - | chr3.3:88851591-88851610 | MS.gene85654:CDS | 30.0% | |
| GAGCAATCTCAAAAGAAAAA+AGG | - | chr3.3:88851515-88851534 | MS.gene85654:CDS | 30.0% | |
| GATAGACTTATATCAGATAG+CGG | - | chr3.3:88847353-88847372 | MS.gene85654:intron | 30.0% | |
| GATATAAGTCTATCCAGTAT+CGG | + | chr3.3:88847347-88847366 | None:intergenic | 30.0% | |
| GATATCCACAAGTATACTTA+TGG | + | chr3.3:88848956-88848975 | None:intergenic | 30.0% | |
| GGAATTAATGTTAGTCATGA+TGG | - | chr3.3:88849181-88849200 | MS.gene85654:intron | 30.0% | |
| TATATAAAGAGACCCGAAAT+GGG | - | chr3.3:88849579-88849598 | MS.gene85654:intron | 30.0% | |
| TCAAACGAAAATATGTTCAC+TGG | - | chr3.3:88849443-88849462 | MS.gene85654:intron | 30.0% | |
| TCGCTAAAAGAAAAAACTAC+AGG | + | chr3.3:88850599-88850618 | None:intergenic | 30.0% | |
| TCTACAGTATAGTAATTGCT+AGG | - | chr3.3:88850761-88850780 | MS.gene85654:intron | 30.0% | |
| TGACGAATGTATAAATTACC+AGG | + | chr3.3:88851547-88851566 | None:intergenic | 30.0% | |
| TGAGGAAGAATCTAATGAAA+CGG | - | chr3.3:88847968-88847987 | MS.gene85654:intron | 30.0% | |
| TTCAAGAGTTATCACTGATA+GGG | - | chr3.3:88849344-88849363 | MS.gene85654:intron | 30.0% | |
| TTCATATATTCTGCTCAATG+CGG | + | chr3.3:88849098-88849117 | None:intergenic | 30.0% | |
| ! | AACTGTTTTCACATAAGCTA+TGG | + | chr3.3:88848617-88848636 | None:intergenic | 30.0% |
| ! | AAGTATTGTCTGTTCATCAT+AGG | - | chr3.3:88849749-88849768 | MS.gene85654:intron | 30.0% |
| ! | AGTCTTTATTTCTTTGTAGG+TGG | - | chr3.3:88850405-88850424 | MS.gene85654:intron | 30.0% |
| ! | TCATAGACACTTACTTGTTT+TGG | + | chr3.3:88851336-88851355 | None:intergenic | 30.0% |
| ! | TTTTGCCATAAGTATACTTG+TGG | - | chr3.3:88848948-88848967 | MS.gene85654:CDS | 30.0% |
| !! | AAACTTCTGCTGGTTTAATA+TGG | - | chr3.3:88850291-88850310 | MS.gene85654:CDS | 30.0% |
| !! | ACCATTATATACTTGTTGTC+AGG | - | chr3.3:88851438-88851457 | MS.gene85654:CDS | 30.0% |
| !! | ACTTTTTCTTCTTCTGAATC+AGG | - | chr3.3:88851270-88851289 | MS.gene85654:intron | 30.0% |
| !! | GGAAATTCACTTTTCCATAT+AGG | - | chr3.3:88850214-88850233 | MS.gene85654:CDS | 30.0% |
| !! | GTTTTGGTATGCTGAAATAT+CGG | + | chr3.3:88851320-88851339 | None:intergenic | 30.0% |
| !! | TCACTTTTCCATATAGGTAT+GGG | - | chr3.3:88850220-88850239 | MS.gene85654:CDS | 30.0% |
| !! | TTCACTTTTCCATATAGGTA+TGG | - | chr3.3:88850219-88850238 | MS.gene85654:CDS | 30.0% |
| !!! | AATCCGTCTTTATTTTCACA+GGG | - | chr3.3:88850138-88850157 | MS.gene85654:intron | 30.0% |
| AAACAAACTGTAATTTGGGG+TGG | + | chr3.3:88848324-88848343 | None:intergenic | 35.0% | |
| AAACTTGTACACTAAGCTAG+CGG | - | chr3.3:88847658-88847677 | MS.gene85654:CDS | 35.0% | |
| AACAAGGGGATGAAATTTGT+GGG | - | chr3.3:88849061-88849080 | MS.gene85654:intron | 35.0% | |
| AACGAAAATATGTTCACTGG+TGG | - | chr3.3:88849446-88849465 | MS.gene85654:CDS | 35.0% | |
| AAGGGTAATCTTTCATGTTC+CGG | + | chr3.3:88850832-88850851 | None:intergenic | 35.0% | |
| AAGGTGAATATGTTGCATAC+TGG | - | chr3.3:88851479-88851498 | MS.gene85654:CDS | 35.0% | |
| AATGCGTTACAAGAAGATGT+AGG | + | chr3.3:88850109-88850128 | None:intergenic | 35.0% | |
| AATGCTTTATGCTCGTAGAA+AGG | - | chr3.3:88847604-88847623 | MS.gene85654:CDS | 35.0% | |
| ACAAATGTTACATTCAGGCT+CGG | + | chr3.3:88847699-88847718 | None:intergenic | 35.0% | |
| AGAGAAGGAAGAATATCTTC+AGG | + | chr3.3:88848024-88848043 | None:intergenic | 35.0% | |
| AGGAAGAATCTAATGAAACG+GGG | - | chr3.3:88847970-88847989 | MS.gene85654:intron | 35.0% | |
| ATACTCAATTTCGTAAGGCA+TGG | - | chr3.3:88848407-88848426 | MS.gene85654:intron | 35.0% | |
| ATGCAACATATTCACCTTCT+GGG | + | chr3.3:88851477-88851496 | None:intergenic | 35.0% | |
| ATTCTACTAAATTCTCGCCA+TGG | - | chr3.3:88849618-88849637 | MS.gene85654:intron | 35.0% | |
| CAAAGAAAGGGTAATGCTTA+AGG | - | chr3.3:88849985-88850004 | MS.gene85654:intron | 35.0% | |
| CAACAAATGTCTTCAACAAG+TGG | - | chr3.3:88848252-88848271 | MS.gene85654:intron | 35.0% | |
| CATTTCGGATTTCCAAAAAC+CGG | - | chr3.3:88847179-88847198 | MS.gene85654:intron | 35.0% | |
| CCCAAACAAACTGTAATTTG+GGG | + | chr3.3:88848327-88848346 | None:intergenic | 35.0% | |
| CCCCAAACAAACTGTAATTT+GGG | + | chr3.3:88848328-88848347 | None:intergenic | 35.0% | |
| CCTTCTCTAGTTAAAGCTTA+TGG | - | chr3.3:88848036-88848055 | MS.gene85654:intron | 35.0% | |
| CGAGGATCAATACAATAAAC+AGG | + | chr3.3:88847140-88847159 | None:intergenic | 35.0% | |
| CTATACAACTGCATACAGAA+TGG | - | chr3.3:88849376-88849395 | MS.gene85654:intron | 35.0% | |
| CTCTTGATGTAGGTTAACAA+GGG | - | chr3.3:88849046-88849065 | MS.gene85654:intron | 35.0% | |
| GAAATGAAAGAAGATGGAAC+AGG | - | chr3.3:88851650-88851669 | MS.gene85654:CDS | 35.0% | |
| GAGGAAGAATCTAATGAAAC+GGG | - | chr3.3:88847969-88847988 | MS.gene85654:intron | 35.0% | |
| GCAAAAGCCATTTCCTATTT+CGG | + | chr3.3:88848768-88848787 | None:intergenic | 35.0% | |
| GCCTGACAACAAGTATATAA+TGG | + | chr3.3:88851442-88851461 | None:intergenic | 35.0% | |
| GCGATCAAAGTAAAGCTATT+TGG | + | chr3.3:88847636-88847655 | None:intergenic | 35.0% | |
| GCTTTAACTCCATCTAGAAA+AGG | - | chr3.3:88849943-88849962 | MS.gene85654:intron | 35.0% | |
| GGATAATGAAACTCTCTACA+AGG | - | chr3.3:88847088-88847107 | MS.gene85654:CDS | 35.0% | |
| GTATATAAAGAGACCCGAAA+TGG | - | chr3.3:88849578-88849597 | MS.gene85654:intron | 35.0% | |
| GTTCAAGAGTTATCACTGAT+AGG | - | chr3.3:88849343-88849362 | MS.gene85654:intron | 35.0% | |
| GTTTGACATAAATCCTGTAG+TGG | + | chr3.3:88850704-88850723 | None:intergenic | 35.0% | |
| TAACAAGGGGATGAAATTTG+TGG | - | chr3.3:88849060-88849079 | MS.gene85654:intron | 35.0% | |
| TATGCAACATATTCACCTTC+TGG | + | chr3.3:88851478-88851497 | None:intergenic | 35.0% | |
| TCAAGTCATCCAAACATTCA+AGG | + | chr3.3:88847951-88847970 | None:intergenic | 35.0% | |
| TCACTATGTAATACACCTTC+AGG | - | chr3.3:88850644-88850663 | MS.gene85654:intron | 35.0% | |
| TCTTAAGCTTGTACATGTGT+AGG | - | chr3.3:88849544-88849563 | MS.gene85654:intron | 35.0% | |
| TCTTGATGTAGGTTAACAAG+GGG | - | chr3.3:88849047-88849066 | MS.gene85654:intron | 35.0% | |
| TTATTTGAATCCTGGAGAGA+TGG | - | chr3.3:88850468-88850487 | MS.gene85654:intron | 35.0% | |
| TTCATGTTTGCATCTATCAG+AGG | + | chr3.3:88850673-88850692 | None:intergenic | 35.0% | |
| TTGAACAACCCATACCTATA+TGG | + | chr3.3:88850231-88850250 | None:intergenic | 35.0% | |
| TTGAATGTTTGGATGACTTG+AGG | - | chr3.3:88847950-88847969 | MS.gene85654:intron | 35.0% | |
| TTGGTGAATGTGAAATTGTC+AGG | - | chr3.3:88848177-88848196 | MS.gene85654:intron | 35.0% | |
| TTTCATGTTCCGGTTACAAA+AGG | + | chr3.3:88850822-88850841 | None:intergenic | 35.0% | |
| TTTGCAACCACTTACCATTT+CGG | - | chr3.3:88847164-88847183 | MS.gene85654:intron | 35.0% | |
| ! | AAGAATATACCTCCGGTTTT+TGG | + | chr3.3:88847194-88847213 | None:intergenic | 35.0% |
| ! | AAGCAAATAGTTCTACCTAC+TGG | - | chr3.3:88849796-88849815 | MS.gene85654:intron | 35.0% |
| ! | ACCCCAAATTACAGTTTGTT+TGG | - | chr3.3:88848323-88848342 | MS.gene85654:intron | 35.0% |
| ! | ATTTCAAGTGTTAGCCTGTT+AGG | - | chr3.3:88847392-88847411 | MS.gene85654:intron | 35.0% |
| ! | CCATAAGCTTTAACTAGAGA+AGG | + | chr3.3:88848039-88848058 | None:intergenic | 35.0% |
| ! | CCCAAATTACAGTTTGTTTG+GGG | - | chr3.3:88848325-88848344 | MS.gene85654:intron | 35.0% |
| ! | CCCCAAATTACAGTTTGTTT+GGG | - | chr3.3:88848324-88848343 | MS.gene85654:intron | 35.0% |
| ! | TAGAAACGATCTCAGAGTTT+TGG | - | chr3.3:88847067-88847086 | MS.gene85654:CDS | 35.0% |
| ! | TCATGGATTAAAACTTCTGC+TGG | - | chr3.3:88850281-88850300 | MS.gene85654:CDS | 35.0% |
| ! | TGTTATTGGAAGTGTACCTT+TGG | + | chr3.3:88847010-88847029 | None:intergenic | 35.0% |
| ! | TTTGAGATTGCTCTTAACTG+TGG | + | chr3.3:88851508-88851527 | None:intergenic | 35.0% |
| !! | AAGTGTACCTTTGGAATGTT+TGG | + | chr3.3:88847001-88847020 | None:intergenic | 35.0% |
| !! | AATTGATGCATCTTTAGGGT+TGG | - | chr3.3:88848146-88848165 | MS.gene85654:intron | 35.0% |
| !! | ATGGTTTGAGACATGTCTTT+TGG | - | chr3.3:88850917-88850936 | MS.gene85654:intron | 35.0% |
| !! | CTTGTTTTCATAAGCTATCC+TGG | + | chr3.3:88848594-88848613 | None:intergenic | 35.0% |
| !!! | CCCTTTTTGAGTAAACATGA+AGG | - | chr3.3:88849321-88849340 | MS.gene85654:intron | 35.0% |
| !!! | GAATCCGTCTTTATTTTCAC+AGG | - | chr3.3:88850137-88850156 | MS.gene85654:intron | 35.0% |
| !!! | TTTTGAAATTATTCCCGGTG+TGG | + | chr3.3:88847270-88847289 | None:intergenic | 35.0% |
| AAAGCCATTTCCTATTTCGG+TGG | + | chr3.3:88848765-88848784 | None:intergenic | 40.0% | |
| ACAACTGCATACAGAATGGA+AGG | - | chr3.3:88849380-88849399 | MS.gene85654:intron | 40.0% | |
| ACAAGGGGATGAAATTTGTG+GGG | - | chr3.3:88849062-88849081 | MS.gene85654:intron | 40.0% | |
| ACACTTCCAATAACACCAAG+AGG | - | chr3.3:88847015-88847034 | MS.gene85654:CDS | 40.0% | |
| ACAGGATTTATGTCAAACCG+AGG | - | chr3.3:88850706-88850725 | MS.gene85654:intron | 40.0% | |
| ACGCATAAGTTAACCGATAC+TGG | - | chr3.3:88847331-88847350 | MS.gene85654:intron | 40.0% | |
| AGAGCTAGACTCTAACGAAA+TGG | - | chr3.3:88846962-88846981 | MS.gene85654:CDS | 40.0% | |
| ATCAAACTGCCAACATCACT+TGG | - | chr3.3:88848850-88848869 | MS.gene85654:intron | 40.0% | |
| ATCTATCAGAGGATACCTGA+AGG | + | chr3.3:88850662-88850681 | None:intergenic | 40.0% | |
| ATGAAACTCTCTACAAGGCT+TGG | - | chr3.3:88847093-88847112 | MS.gene85654:CDS | 40.0% | |
| ATTGACGAAGAAGATGCTGA+GGG | + | chr3.3:88846930-88846949 | None:intergenic | 40.0% | |
| CAAATTGTGCCTCTCAAGTT+TGG | - | chr3.3:88851565-88851584 | MS.gene85654:CDS | 40.0% | |
| CAACTGCATACAGAATGGAA+GGG | - | chr3.3:88849381-88849400 | MS.gene85654:intron | 40.0% | |
| CATCAAAAGGAAGATCGTCA+CGG | + | chr3.3:88848366-88848385 | None:intergenic | 40.0% | |
| CCTCTTGATGTAGGTTAACA+AGG | - | chr3.3:88849045-88849064 | MS.gene85654:intron | 40.0% | |
| CCTTGTTAACCTACATCAAG+AGG | + | chr3.3:88849048-88849067 | None:intergenic | 40.0% | |
| CGCTGACAAATGTTACATTC+AGG | + | chr3.3:88847704-88847723 | None:intergenic | 40.0% | |
| CTCTAACGAAATGGAAAGTG+TGG | - | chr3.3:88846971-88846990 | MS.gene85654:CDS | 40.0% | |
| CTGAAATATCGGTCTTCTCT+AGG | + | chr3.3:88851309-88851328 | None:intergenic | 40.0% | |
| CTTATTTCCATAAGCTCTCC+AGG | - | chr3.3:88848573-88848592 | MS.gene85654:intron | 40.0% | |
| GAAGATGGAACAGGAGATAA+TGG | - | chr3.3:88851659-88851678 | MS.gene85654:CDS | 40.0% | |
| GATTTATGTCAAACCGAGGA+CGG | - | chr3.3:88850710-88850729 | MS.gene85654:intron | 40.0% | |
| GCACAAGGTCATGTTCATAA+AGG | + | chr3.3:88847907-88847926 | None:intergenic | 40.0% | |
| GCCCCAAACAAACTGTAATT+TGG | + | chr3.3:88848329-88848348 | None:intergenic | 40.0% | |
| GGCAAACAAGTGACATCAAA+AGG | + | chr3.3:88848379-88848398 | None:intergenic | 40.0% | |
| TAAGTGGTTGCAAATAGTCG+AGG | + | chr3.3:88847158-88847177 | None:intergenic | 40.0% | |
| TCAAGTATGGACGTCTTACA+AGG | + | chr3.3:88848547-88848566 | None:intergenic | 40.0% | |
| TCCTTCCTAGTTCGTGATAT+GGG | - | chr3.3:88850870-88850889 | MS.gene85654:intron | 40.0% | |
| TCTTCTTCTGAATCAGGAGT+CGG | - | chr3.3:88851276-88851295 | MS.gene85654:intron | 40.0% | |
| TGCTATGGAGGGATTACTTT+AGG | - | chr3.3:88850173-88850192 | MS.gene85654:CDS | 40.0% | |
| TGGAAATCCGAAATGGTAAG+TGG | + | chr3.3:88847174-88847193 | None:intergenic | 40.0% | |
| TGGCAAACCAAACATTCCAA+AGG | - | chr3.3:88846991-88847010 | MS.gene85654:CDS | 40.0% | |
| TGTTTGCTTCCTCTTGATGT+AGG | - | chr3.3:88849036-88849055 | MS.gene85654:intron | 40.0% | |
| TTCAAAGTCTTTGATGCCTC+TGG | - | chr3.3:88850246-88850265 | MS.gene85654:CDS | 40.0% | |
| TTCCTTCCTAGTTCGTGATA+TGG | - | chr3.3:88850869-88850888 | MS.gene85654:intron | 40.0% | |
| TTGTCCACCGAAATAGGAAA+TGG | - | chr3.3:88848758-88848777 | MS.gene85654:intron | 40.0% | |
| ! | AATAATGGGGACAAGTCACT+TGG | - | chr3.3:88851604-88851623 | MS.gene85654:CDS | 40.0% |
| ! | ATGTTAGTCATGATGGGAGT+AGG | - | chr3.3:88849188-88849207 | MS.gene85654:intron | 40.0% |
| ! | ATTTCGTTAGAGTCTAGCTC+TGG | + | chr3.3:88846963-88846982 | None:intergenic | 40.0% |
| ! | GAAAACGAAGTGTTACCAGT+AGG | + | chr3.3:88849814-88849833 | None:intergenic | 40.0% |
| ! | GTTAAGTTGTCCACCGAAAT+AGG | - | chr3.3:88848752-88848771 | MS.gene85654:intron | 40.0% |
| ! | TGTTAGTCATGATGGGAGTA+GGG | - | chr3.3:88849189-88849208 | MS.gene85654:intron | 40.0% |
| ! | TTGCACACACCTTTTGTAAC+CGG | - | chr3.3:88850810-88850829 | MS.gene85654:intron | 40.0% |
| !! | CGGTTTTTGGAAATCCGAAA+TGG | + | chr3.3:88847181-88847200 | None:intergenic | 40.0% |
| !! | CTTCTGCTGGTTTAATATGG+CGG | - | chr3.3:88850294-88850313 | MS.gene85654:CDS | 40.0% |
| !! | TACTTTTGGAAGAAGGTCAG+AGG | - | chr3.3:88849118-88849137 | MS.gene85654:intron | 40.0% |
| !! | TTTAGGGTTGGTTGGTTCAT+TGG | - | chr3.3:88848158-88848177 | MS.gene85654:intron | 40.0% |
| !! | TTTGTTCGAGTTGCTATGGA+GGG | - | chr3.3:88850162-88850181 | MS.gene85654:CDS | 40.0% |
| !!! | TTTTGTTCGAGTTGCTATGG+AGG | - | chr3.3:88850161-88850180 | MS.gene85654:CDS | 40.0% |
| AACACCAAGAGGAGTGGTAA+AGG | - | chr3.3:88847026-88847045 | MS.gene85654:CDS | 45.0% | |
| AAGCTATCCTGGAGAGCTTA+TGG | + | chr3.3:88848583-88848602 | None:intergenic | 45.0% | |
| AAGGACTAGAGTCTCTTGCA+TGG | + | chr3.3:88848978-88848997 | None:intergenic | 45.0% | |
| AAGGGGATGAAATTTGTGGG+GGG | - | chr3.3:88849064-88849083 | MS.gene85654:intron | 45.0% | |
| AATATGTTCACTGGTGGCTC+CGG | - | chr3.3:88849452-88849471 | MS.gene85654:CDS | 45.0% | |
| ACATCCCCAATCCTCAATTG+GGG | + | chr3.3:88848884-88848903 | None:intergenic | 45.0% | |
| AGAAACTTGTAGCGAAGAGC+TGG | - | chr3.3:88848213-88848232 | MS.gene85654:intron | 45.0% | |
| AGACATCCCCAATCCTCAAT+TGG | + | chr3.3:88848886-88848905 | None:intergenic | 45.0% | |
| AGACCCGAAATGGGATGTTA+GGG | - | chr3.3:88849588-88849607 | MS.gene85654:intron | 45.0% | |
| CAAGAGGAGTGGTAAAGGTA+CGG | - | chr3.3:88847031-88847050 | MS.gene85654:CDS | 45.0% | |
| CAAGGGGATGAAATTTGTGG+GGG | - | chr3.3:88849063-88849082 | MS.gene85654:intron | 45.0% | |
| CAAGTGGTAGTACCATCTGA+CGG | - | chr3.3:88848268-88848287 | MS.gene85654:intron | 45.0% | |
| CATTGACGAAGAAGATGCTG+AGG | + | chr3.3:88846931-88846950 | None:intergenic | 45.0% | |
| CTAGTCGTTCCAAACTTGAG+AGG | + | chr3.3:88851577-88851596 | None:intergenic | 45.0% | |
| CTATGCCCATATCACGAACT+AGG | + | chr3.3:88850878-88850897 | None:intergenic | 45.0% | |
| CTTCTTCTGAATCAGGAGTC+GGG | - | chr3.3:88851277-88851296 | MS.gene85654:intron | 45.0% | |
| GACATCCCCAATCCTCAATT+GGG | + | chr3.3:88848885-88848904 | None:intergenic | 45.0% | |
| GCACAAACATATGACCCAGA+AGG | - | chr3.3:88851460-88851479 | MS.gene85654:CDS | 45.0% | |
| GGAAACTGGACTTATGGATC+AGG | - | chr3.3:88850963-88850982 | MS.gene85654:intron | 45.0% | |
| GGACTTTCCTCACAGAATGT+AGG | - | chr3.3:88848925-88848944 | MS.gene85654:CDS | 45.0% | |
| GGCAAAACCTACATTCTGTG+AGG | + | chr3.3:88848935-88848954 | None:intergenic | 45.0% | |
| TCCAATAACACCAAGAGGAG+TGG | - | chr3.3:88847020-88847039 | MS.gene85654:CDS | 45.0% | |
| TGAAACTGAGATGTCCACAC+CGG | - | chr3.3:88847253-88847272 | MS.gene85654:CDS | 45.0% | |
| TGATGCCTCTGGCGATTTAT+CGG | - | chr3.3:88850257-88850276 | MS.gene85654:CDS | 45.0% | |
| TGTGTTCTCAATGCTGCACA+AGG | + | chr3.3:88847922-88847941 | None:intergenic | 45.0% | |
| TTCGGATTTCCAAAAACCGG+AGG | - | chr3.3:88847182-88847201 | MS.gene85654:intron | 45.0% | |
| TTGGGGATGTCTTCCTTCAT+TGG | - | chr3.3:88848894-88848913 | MS.gene85654:intron | 45.0% | |
| !! | AAGTCACTTGGTGCAAGAAG+AGG | - | chr3.3:88851616-88851635 | MS.gene85654:CDS | 45.0% |
| !! | ACCACTCCTCTTGGTGTTAT+TGG | + | chr3.3:88847024-88847043 | None:intergenic | 45.0% |
| !! | GATGCATCTTTAGGGTTGGT+TGG | - | chr3.3:88848150-88848169 | MS.gene85654:intron | 45.0% |
| !! | GGCGGTGTTATTCATAGTTG+TGG | - | chr3.3:88850312-88850331 | MS.gene85654:CDS | 45.0% |
| !!! | GGGTTTTGTTCGAGTTGCTA+TGG | - | chr3.3:88850158-88850177 | MS.gene85654:CDS | 45.0% |
| !!! | TCGCACTAGCCTTTTCTAGA+TGG | + | chr3.3:88849955-88849974 | None:intergenic | 45.0% |
| !! | ATAAATTAATTATAACAAAA+AGG | + | chr3.3:88850369-88850388 | None:intergenic | 5.0% |
| ACCTCCCCCAATTGAGGATT+GGG | - | chr3.3:88848876-88848895 | MS.gene85654:intron | 50.0% | |
| ACCTCTTCGTGTATGAGACG+AGG | + | chr3.3:88849665-88849684 | None:intergenic | 50.0% | |
| AGATGCTGAGGGTTCGGATT+TGG | + | chr3.3:88846919-88846938 | None:intergenic | 50.0% | |
| AGGCCCTAACATCCCATTTC+GGG | + | chr3.3:88849594-88849613 | None:intergenic | 50.0% | |
| ATATGTTCACTGGTGGCTCC+GGG | - | chr3.3:88849453-88849472 | MS.gene85654:CDS | 50.0% | |
| ATCGTCACGGTGGTACATAG+TGG | + | chr3.3:88848353-88848372 | None:intergenic | 50.0% | |
| ATGACCCGATAAATCGCCAG+AGG | + | chr3.3:88850265-88850284 | None:intergenic | 50.0% | |
| CAAAAGGAAGATCGTCACGG+TGG | + | chr3.3:88848363-88848382 | None:intergenic | 50.0% | |
| CAGTTTGATGCATGAGCGCA+CGG | + | chr3.3:88848839-88848858 | None:intergenic | 50.0% | |
| CATCCCCAATCCTCAATTGG+GGG | + | chr3.3:88848883-88848902 | None:intergenic | 50.0% | |
| CCTGGAGAGATGGTTGTACA+GGG | - | chr3.3:88850478-88850497 | MS.gene85654:intron | 50.0% | |
| CGAAGAAGATGCTGAGGGTT+CGG | + | chr3.3:88846925-88846944 | None:intergenic | 50.0% | |
| CGTACCTTTACCACTCCTCT+TGG | + | chr3.3:88847033-88847052 | None:intergenic | 50.0% | |
| CTTCCTTCATTGGAGCTGCT+GGG | - | chr3.3:88848904-88848923 | MS.gene85654:CDS | 50.0% | |
| GAAACTGAGATGTCCACACC+GGG | - | chr3.3:88847254-88847273 | MS.gene85654:CDS | 50.0% | |
| GAGACCCGAAATGGGATGTT+AGG | - | chr3.3:88849587-88849606 | MS.gene85654:intron | 50.0% | |
| GAGGCCCTAACATCCCATTT+CGG | + | chr3.3:88849595-88849614 | None:intergenic | 50.0% | |
| GATGCCTCTGGCGATTTATC+GGG | - | chr3.3:88850258-88850277 | MS.gene85654:CDS | 50.0% | |
| GCCCATATCACGAACTAGGA+AGG | + | chr3.3:88850874-88850893 | None:intergenic | 50.0% | |
| GCGAAGAGCTGGATGTTGAA+AGG | - | chr3.3:88848224-88848243 | MS.gene85654:intron | 50.0% | |
| TCCTCGTCTCATACACGAAG+AGG | - | chr3.3:88849661-88849680 | MS.gene85654:CDS | 50.0% | |
| TCCTGGAGAGATGGTTGTAC+AGG | - | chr3.3:88850477-88850496 | MS.gene85654:intron | 50.0% | |
| TCTGGCGATTTATCGGGTCA+TGG | - | chr3.3:88850264-88850283 | MS.gene85654:CDS | 50.0% | |
| TCTTCCTTCATTGGAGCTGC+TGG | - | chr3.3:88848903-88848922 | MS.gene85654:CDS | 50.0% | |
| ! | AGTCATGATGGGAGTAGGGA+TGG | - | chr3.3:88849193-88849212 | MS.gene85654:intron | 50.0% |
| ! | CATTCAGGCTCGGTTTAGCA+AGG | + | chr3.3:88847689-88847708 | None:intergenic | 50.0% |
| ! | GTAAAGGTACGGCAATCGTG+TGG | - | chr3.3:88847042-88847061 | MS.gene85654:CDS | 50.0% |
| AAGCTTCCGGATGCAAGCCA+TGG | + | chr3.3:88849638-88849657 | None:intergenic | 55.0% | |
| AGTCCCAGCAGCTCCAATGA+AGG | + | chr3.3:88848910-88848929 | None:intergenic | 55.0% | |
| CAATCCTCAATTGGGGGAGG+TGG | + | chr3.3:88848877-88848896 | None:intergenic | 55.0% | |
| CACCTCCCCCAATTGAGGAT+TGG | - | chr3.3:88848875-88848894 | MS.gene85654:intron | 55.0% | |
| CCCTGTACAACCATCTCTCC+AGG | + | chr3.3:88850481-88850500 | None:intergenic | 55.0% | |
| CCTCCCCCAATTGAGGATTG+GGG | - | chr3.3:88848877-88848896 | MS.gene85654:intron | 55.0% | |
| GAGACGAGGAGACAAGCTTC+CGG | + | chr3.3:88849651-88849670 | None:intergenic | 55.0% | |
| GGAGGTGGTCCAAGTGATGT+TGG | + | chr3.3:88848862-88848881 | None:intergenic | 55.0% | |
| TATGTCAAACCGAGGACGGC+AGG | - | chr3.3:88850714-88850733 | MS.gene85654:intron | 55.0% | |
| TGCTGAGGGTTCGGATTTGG+TGG | + | chr3.3:88846916-88846935 | None:intergenic | 55.0% | |
| ! | TACCATCTGACGGATCCGCT+GGG | - | chr3.3:88848278-88848297 | MS.gene85654:intron | 55.0% |
| ! | TTCTCGCCATGGCTTGCATC+CGG | - | chr3.3:88849629-88849648 | MS.gene85654:intron | 55.0% |
| ! | TTTGGTTCACCTGCCGTCCT+CGG | + | chr3.3:88850726-88850745 | None:intergenic | 55.0% |
| CCCCAATCCTCAATTGGGGG+AGG | + | chr3.3:88848880-88848899 | None:intergenic | 60.0% | |
| TGGACCACCTCCCCCAATTG+AGG | - | chr3.3:88848870-88848889 | MS.gene85654:intron | 60.0% | |
| ! | ACCATCTGACGGATCCGCTG+GGG | - | chr3.3:88848279-88848298 | MS.gene85654:intron | 60.0% |
| ! | GTACCATCTGACGGATCCGC+TGG | - | chr3.3:88848277-88848296 | MS.gene85654:intron | 60.0% |
| AGAAGCTGATGCCGCCCCAG+CGG | + | chr3.3:88848296-88848315 | None:intergenic | 65.0% | |
| ! | ATCTGACGGATCCGCTGGGG+CGG | - | chr3.3:88848282-88848301 | MS.gene85654:intron | 65.0% |
| GCCCCAGCGGATCCGTCAGA+TGG | + | chr3.3:88848283-88848302 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 88846900 | 88851678 | 88846900 | ID=MS.gene85654 |
| chr3.3 | mRNA | 88846900 | 88851678 | 88846900 | ID=MS.gene85654.t1;Parent=MS.gene85654 |
| chr3.3 | exon | 88851375 | 88851678 | 88851375 | ID=MS.gene85654.t1.exon1;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88851375 | 88851678 | 88851375 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88850510 | 88850649 | 88850510 | ID=MS.gene85654.t1.exon2;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88850510 | 88850649 | 88850510 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88850155 | 88850379 | 88850155 | ID=MS.gene85654.t1.exon3;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88850155 | 88850379 | 88850155 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88849636 | 88849761 | 88849636 | ID=MS.gene85654.t1.exon4;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88849636 | 88849761 | 88849636 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88849446 | 88849520 | 88849446 | ID=MS.gene85654.t1.exon5;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88849446 | 88849520 | 88849446 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88848896 | 88849012 | 88848896 | ID=MS.gene85654.t1.exon6;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88848896 | 88849012 | 88848896 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88848761 | 88848807 | 88848761 | ID=MS.gene85654.t1.exon7;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88848761 | 88848807 | 88848761 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88848343 | 88848419 | 88848343 | ID=MS.gene85654.t1.exon8;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88848343 | 88848419 | 88848343 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88848079 | 88848154 | 88848079 | ID=MS.gene85654.t1.exon9;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88848079 | 88848154 | 88848079 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88847843 | 88847912 | 88847843 | ID=MS.gene85654.t1.exon10;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88847843 | 88847912 | 88847843 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88847594 | 88847717 | 88847594 | ID=MS.gene85654.t1.exon11;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88847594 | 88847717 | 88847594 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88847237 | 88847286 | 88847237 | ID=MS.gene85654.t1.exon12;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88847237 | 88847286 | 88847237 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| chr3.3 | exon | 88846900 | 88847118 | 88846900 | ID=MS.gene85654.t1.exon13;Parent=MS.gene85654.t1 |
| chr3.3 | CDS | 88846900 | 88847118 | 88846900 | ID=cds.MS.gene85654.t1;Parent=MS.gene85654.t1 |
| Gene Sequence |
| Protein sequence |
