AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480023495.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023495.01.T01 MTR_8g094200 88.427 337 19 3 1 322 1 332 0.0 543
MsG0480023495.01.T01 MTR_8g094200 83.165 297 30 3 1 282 1 292 3.21e-165 461
MsG0480023495.01.T01 MTR_3g096860 61.353 207 66 2 122 315 101 306 2.12e-91 275
MsG0480023495.01.T01 MTR_3g096860 55.676 185 68 2 122 293 101 284 1.36e-71 224
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480023495.01.T01 AT4G33480 64.455 211 60 2 122 317 124 334 2.10e-89 271

Find 74 sgRNAs with CRISPR-Local

Find 346 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAGGACCTGTAAAATTAT+AGG 0.218189 4:+86003105 MsG0480023495.01.T01:three_prime_UTR
GTTGTTACTGGTGTTGCTTC+TGG 0.256857 4:+85997852 MsG0480023495.01.T01:CDS
TGTTAGTAATTGTTGTAATC+TGG 0.263737 4:+86003040 MsG0480023495.01.T01:three_prime_UTR
AAGAATTGGAATGAGAATTA+AGG 0.278335 4:-85997641 None:intergenic
AGTTAGTATTTGTTGTTATC+TGG 0.290200 4:+86002991 MsG0480023495.01.T01:three_prime_UTR
TAAGGACCTGTAAAATTATA+GGG 0.308395 4:+86003106 MsG0480023495.01.T01:three_prime_UTR
ACAGAAAATTGTAGAAGAAT+TGG 0.315728 4:-85997655 None:intergenic
GCAAACCCGGTGGGAGGTTC+CGG 0.321014 4:-85997909 None:intergenic
TCCTGATGATATGCCGTTGC+CGG 0.337706 4:+85997890 MsG0480023495.01.T01:CDS
GATGTTCAAAATGTTGTTAC+TGG 0.344264 4:+85997840 MsG0480023495.01.T01:CDS
AAATTCAGTCTCCTCGTCTA+TGG 0.365085 4:-86002587 None:intergenic
TTAATTACTTACGTGTCAAC+CGG 0.369775 4:-85998159 None:intergenic
GCTCAGGTCAATGAGCAAAT+TGG 0.397251 4:-86003163 None:intergenic
AAATAGATTGACTGTGCTCT+TGG 0.399674 4:+86003129 MsG0480023495.01.T01:three_prime_UTR
CATTTGTGAACAGGACTTGC+TGG 0.414686 4:+86002543 MsG0480023495.01.T01:intron
TTCTGCTTACTTCAACAAAT+CGG 0.416331 4:+85997952 MsG0480023495.01.T01:CDS
CAATAATTCAAAATCAGTAT+TGG 0.434374 4:-85997796 None:intergenic
TTCCGTTGGAGTGTGTGGTT+CGG 0.440368 4:+85998091 MsG0480023495.01.T01:CDS
TTATTTGTGCAGGGTGAGAA+TGG 0.443645 4:+86002162 MsG0480023495.01.T01:intron
CTTCAGTTGAAACTGAGGAT+TGG 0.448739 4:+85997760 MsG0480023495.01.T01:CDS
TCCGGCAACGGCATATCATC+AGG 0.470462 4:-85997891 None:intergenic
GGAGACTGAATTTAATGCCT+TGG 0.472300 4:+86002597 MsG0480023495.01.T01:CDS
TCCAACGGAAGGTTATTCAT+AGG 0.482809 4:-85998078 None:intergenic
GGGTTTGCCATTGACGAAAA+CGG 0.491547 4:+85997924 MsG0480023495.01.T01:CDS
CCGTTGCCGGAACCTCCCAC+CGG 0.491708 4:+85997903 MsG0480023495.01.T01:CDS
CGGTAAAATCAACCGTGCTC+AGG 0.495598 4:-86003179 None:intergenic
AACAAGATGCATGTGTATCT+TGG 0.502259 4:-85999251 None:intergenic
GACTGAATTTAATGCCTTGG+TGG 0.506705 4:+86002600 MsG0480023495.01.T01:CDS
TGAATGTATGTTGCTTTGCC+CGG 0.514398 4:+85998140 MsG0480023495.01.T01:CDS
GCGAGCGCATACGCTGCAGC+AGG 0.519080 4:-85999229 None:intergenic
TCCTATGAATAACCTTCCGT+TGG 0.519345 4:+85998077 MsG0480023495.01.T01:CDS
GTGCTCTTCAATATTTGCAC+AGG 0.520741 4:-85998270 None:intergenic
AAAATTGATCATATACATAG+AGG 0.521725 4:-86003082 None:intergenic
AAATTGATCATATACATAGA+GGG 0.530400 4:-86003081 None:intergenic
ACTTCAGTTTGTTGTTGTGA+AGG 0.541807 4:+86001252 MsG0480023495.01.T01:CDS
ACATGCATCTTGTTTACAGC+GGG 0.542894 4:+85999260 MsG0480023495.01.T01:CDS
CCGGTGGGAGGTTCCGGCAA+CGG 0.543817 4:-85997903 None:intergenic
TGCACTTATTGAAGCAATGA+TGG 0.547958 4:+86002881 MsG0480023495.01.T01:CDS
AATTGCAACTGCTGCTGCTG+AGG 0.548569 4:-85997559 None:intergenic
CGTTGCCGGAACCTCCCACC+GGG 0.548585 4:+85997904 MsG0480023495.01.T01:CDS
ATCATCAGGATAAAATAAAG+AGG 0.555773 4:-85997877 None:intergenic
TATTTGTGCAGGGTGAGAAT+GGG 0.556129 4:+86002163 MsG0480023495.01.T01:intron
CTTACAGCTGACCATCCATC+AGG 0.563519 4:-85998294 None:intergenic
TATAATTGTTGTCACAAGAG+GGG 0.574697 4:+85997474 None:intergenic
TAATTACTTACGTGTCAACC+GGG 0.577475 4:-85998158 None:intergenic
ATAATTGTTGTCACAAGAGG+GGG 0.577737 4:+85997475 None:intergenic
TCTATGGCGTCAATGACAGC+AGG 0.580809 4:-86002571 None:intergenic
TAACCTTCCGTTGGAGTGTG+TGG 0.581027 4:+85998086 MsG0480023495.01.T01:CDS
TTCACAACAACAAACTGAAG+TGG 0.585546 4:-86001250 None:intergenic
TTCGTCAATGGCAAACCCGG+TGG 0.591270 4:-85997919 None:intergenic
AAAACAAAGATAGATGAGAT+CGG 0.591300 4:-86003199 None:intergenic
ATATTGAAGAGCACACCTGA+TGG 0.594346 4:+85998279 MsG0480023495.01.T01:CDS
TGCAGATGATGGTAATGAAG+TGG 0.597707 4:+86000428 MsG0480023495.01.T01:intron
TGAAGAGCACACCTGATGGA+TGG 0.603729 4:+85998283 MsG0480023495.01.T01:CDS
TGAGAATGGGATGTTTCAAA+TGG 0.603878 4:+86002176 MsG0480023495.01.T01:CDS
TTTGCTCATTGACCTGAGCA+CGG 0.605141 4:+86003167 MsG0480023495.01.T01:three_prime_UTR
GTAATTTCTACACCATCACT+TGG 0.605477 4:-86000459 None:intergenic
GTGGATGGCTTGCCAAGTGA+TGG 0.606609 4:+86000447 MsG0480023495.01.T01:CDS
GATTACAACAATTACTAACA+AGG 0.607104 4:-86003037 None:intergenic
ACAAACTGAAGTGGTTCAGA+TGG 0.608941 4:-86001241 None:intergenic
CTCCGAACCACACACTCCAA+CGG 0.614714 4:-85998093 None:intergenic
GAATTCTTCAGTTGAAACTG+AGG 0.615714 4:+85997755 MsG0480023495.01.T01:CDS
TCGTCAATGGCAAACCCGGT+GGG 0.620091 4:-85997918 None:intergenic
ATTACAACAATTACTAACAA+GGG 0.630057 4:-86003036 None:intergenic
GAACCACACACTCCAACGGA+AGG 0.636707 4:-85998089 None:intergenic
CACATGCATCTTGTTTACAG+CGG 0.646015 4:+85999259 MsG0480023495.01.T01:CDS
TCAATGGCAAACCCGGTGGG+AGG 0.656601 4:-85997915 None:intergenic
TGTCATTGACGCCATAGACG+AGG 0.663191 4:+86002576 MsG0480023495.01.T01:CDS
TACTGTTACACAGCACGTGG+CGG 0.668638 4:+85999371 MsG0480023495.01.T01:CDS
AATTGATCATATACATAGAG+GGG 0.671889 4:-86003080 None:intergenic
TAATTGTTGTCACAAGAGGG+GGG 0.697643 4:+85997476 None:intergenic
GATGATGGTAATGAAGTGGA+TGG 0.699911 4:+86000432 MsG0480023495.01.T01:intron
AGGTACTGTTACACAGCACG+TGG 0.735751 4:+85999368 MsG0480023495.01.T01:intron
AATGAAGTCACATACCACCA+AGG 0.747149 4:-86002614 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAGAAAAAAAAAAAAAAAA+AGG - Chr4:85999130-85999149 None:intergenic 10.0%
!! AAAAAAAAAAAAAAAGGGAA+AGG - Chr4:85999124-85999143 None:intergenic 15.0%
!! AAAATGAAAAGTTAATCTTT+AGG + Chr4:86000274-86000293 MsG0480023495.01.T01:intron 15.0%
!! AAAATTAAATAACACGATTT+AGG - Chr4:85998573-85998592 None:intergenic 15.0%
!! AATTAAAATCTATGTTTGTA+TGG + Chr4:85999019-85999038 MsG0480023495.01.T01:intron 15.0%
!! AGATATTATGATAATTAACT+TGG + Chr4:86002136-86002155 MsG0480023495.01.T01:intron 15.0%
!! ATGAAAATATGTTAATAAGT+CGG + Chr4:86001544-86001563 MsG0480023495.01.T01:intron 15.0%
!!! ATTTTAAATAAGTTGTTAAC+AGG + Chr4:85998050-85998069 MsG0480023495.01.T01:intron 15.0%
!!! GCTTCTAAATTTAAAATTAA+TGG - Chr4:86000937-86000956 None:intergenic 15.0%
!!! GGTAATTTTATTAACTTAAT+TGG + Chr4:86000494-86000513 MsG0480023495.01.T01:intron 15.0%
!!! TCTTATAATCCAATTTTATA+AGG + Chr4:86001578-86001597 MsG0480023495.01.T01:intron 15.0%
!!! TTATTTTAGTTTTTGTGATA+TGG + Chr4:85998981-85999000 MsG0480023495.01.T01:intron 15.0%
!!! TTTATTATTATTGATGACTA+TGG + Chr4:85998224-85998243 MsG0480023495.01.T01:intron 15.0%
!!! TTTTGTAGTTAATTAATGAT+TGG - Chr4:86002226-86002245 None:intergenic 15.0%
!! AAAATGTTCATACAAAAATG+GGG + Chr4:85998716-85998735 MsG0480023495.01.T01:intron 20.0%
!! AAAATTGATCATATACATAG+AGG - Chr4:86003085-86003104 None:intergenic 20.0%
!! AAATTGATCATATACATAGA+GGG - Chr4:86003084-86003103 None:intergenic 20.0%
!! AAGAAAATATATAGGAGAAT+TGG - Chr4:86001883-86001902 None:intergenic 20.0%
!! AGGAAGTTATTATCAATATA+TGG + Chr4:86000294-86000313 MsG0480023495.01.T01:intron 20.0%
!! ATAACAAACAACGAAATATT+GGG - Chr4:85998919-85998938 None:intergenic 20.0%
!! ATAAGTTCATTTCAATGAAT+TGG - Chr4:86000673-86000692 None:intergenic 20.0%
!! ATACAAATACTTCATAGTTT+AGG - Chr4:85998891-85998910 None:intergenic 20.0%
!! ATCTTAAACAAGTCTATAAA+AGG - Chr4:86001987-86002006 None:intergenic 20.0%
!! ATGCTTTAATAAGAGTTTAA+TGG + Chr4:85998613-85998632 MsG0480023495.01.T01:intron 20.0%
!! ATTACAACAATTACTAACAA+GGG - Chr4:86003039-86003058 None:intergenic 20.0%
!! ATTAGATTACAGAGAAAAAA+GGG + Chr4:85997508-85997527 MsG0480023495.01.T01:five_prime_UTR 20.0%
!! ATTCTTAATGTTATCTTGAA+TGG + Chr4:85998393-85998412 MsG0480023495.01.T01:intron 20.0%
!! ATTTAACTAATATTCAGAAG+AGG + Chr4:86001365-86001384 MsG0480023495.01.T01:intron 20.0%
!! CAAAATGTTCATACAAAAAT+GGG + Chr4:85998715-85998734 MsG0480023495.01.T01:intron 20.0%
!! CAATAATTCAAAATCAGTAT+TGG - Chr4:85997799-85997818 None:intergenic 20.0%
!! CATGGAATAAATAGTTAAAA+AGG - Chr4:86002798-86002817 None:intergenic 20.0%
!! CTTATTCTTGTGATATTATA+AGG + Chr4:85999769-85999788 MsG0480023495.01.T01:intron 20.0%
!! GAAGTTGCTAAATTATAATA+CGG - Chr4:85999923-85999942 None:intergenic 20.0%
!! GTGAAGTGAAAAATAAAAAA+CGG - Chr4:86000630-86000649 None:intergenic 20.0%
!! TCAAAATGTTCATACAAAAA+TGG + Chr4:85998714-85998733 MsG0480023495.01.T01:intron 20.0%
!! TGAAAATATGTTAATAAGTC+GGG + Chr4:86001545-86001564 MsG0480023495.01.T01:intron 20.0%
!! TGAAGTGAAAAATAAAAAAC+GGG - Chr4:86000629-86000648 None:intergenic 20.0%
!! TTTAGTAAATTATGATACGA+TGG + Chr4:86002640-86002659 MsG0480023495.01.T01:intron 20.0%
!!! AAATTGAGATTTAAAATGCA+GGG - Chr4:85998326-85998345 None:intergenic 20.0%
!!! AAATTTAAAATTAATGGACG+AGG - Chr4:86000931-86000950 None:intergenic 20.0%
!!! AATATTTCGTTGTTTGTTAT+GGG + Chr4:85998919-85998938 MsG0480023495.01.T01:intron 20.0%
!!! AGAAATTACATATTTTGATC+TGG + Chr4:86000473-86000492 MsG0480023495.01.T01:CDS 20.0%
!!! ATATGGAATTTTATTAATGC+AGG + Chr4:85998247-85998266 MsG0480023495.01.T01:intron 20.0%
!!! ATTGAATTTGAAACTAAGAA+AGG - Chr4:86002263-86002282 None:intergenic 20.0%
!!! CTGTAGATCATAATTTTTAA+AGG - Chr4:85998797-85998816 None:intergenic 20.0%
!!! TAGATCTGAATTTTTACAAT+TGG + Chr4:86002102-86002121 MsG0480023495.01.T01:intron 20.0%
!!! TGTATATGATCAATTTTGTA+AGG + Chr4:86003088-86003107 MsG0480023495.01.T01:three_prime_UTR 20.0%
!!! TTGTATGAACATTTTGAAAT+TGG - Chr4:85998711-85998730 None:intergenic 20.0%
!!! TTTTGAAATGAAACTGAAAT+TGG - Chr4:85997621-85997640 None:intergenic 20.0%
!!! TTTTGATTGTTTTTCAGTTT+TGG + Chr4:86003226-86003245 MsG0480023495.01.T01:three_prime_UTR 20.0%
! AAAAAGAATGTCATTGTATG+TGG - Chr4:85999077-85999096 None:intergenic 25.0%
! AAAACAAAGATAGATGAGAT+CGG - Chr4:86003202-86003221 None:intergenic 25.0%
! AAAAGGAAAACGTTTGATAT+TGG + Chr4:86001341-86001360 MsG0480023495.01.T01:intron 25.0%
! AAAGACTTGATAAAAACAGA+TGG - Chr4:86000771-86000790 None:intergenic 25.0%
! AAGAATTGGAATGAGAATTA+AGG - Chr4:85997644-85997663 None:intergenic 25.0%
! AAGACTTGATAAAAACAGAT+GGG - Chr4:86000770-86000789 None:intergenic 25.0%
! AAGCATTATTCAAAGAGATT+TGG - Chr4:85998599-85998618 None:intergenic 25.0%
! AATAAAAATGAGTGATATGC+AGG - Chr4:85998966-85998985 None:intergenic 25.0%
! AATCAAGCATGAAAAAACTT+GGG - Chr4:86000200-86000219 None:intergenic 25.0%
! AATCAATCGCCTTATAAAAT+TGG - Chr4:86001590-86001609 None:intergenic 25.0%
! AATTGATCATATACATAGAG+GGG - Chr4:86003083-86003102 None:intergenic 25.0%
! ACAAGAATAATGTATAGATC+AGG - Chr4:86000808-86000827 None:intergenic 25.0%
! ACAGAAAATTGTAGAAGAAT+TGG - Chr4:85997658-85997677 None:intergenic 25.0%
! ACTACTATAAACTAAAAGAG+AGG - Chr4:85999693-85999712 None:intergenic 25.0%
! ACTTCATGATATAAACACTA+TGG - Chr4:86000875-86000894 None:intergenic 25.0%
! ATAAAAATGAGTGATATGCA+GGG - Chr4:85998965-85998984 None:intergenic 25.0%
! ATCATCAGGATAAAATAAAG+AGG - Chr4:85997880-85997899 None:intergenic 25.0%
! CAGTTGGAAAAATGAAAATT+AGG - Chr4:86000223-86000242 None:intergenic 25.0%
! CATAACAAACAACGAAATAT+TGG - Chr4:85998920-85998939 None:intergenic 25.0%
! CGAGTAACAATGAATATATA+TGG - Chr4:86000139-86000158 None:intergenic 25.0%
! GAAAATATGTTAATAAGTCG+GGG + Chr4:86001546-86001565 MsG0480023495.01.T01:intron 25.0%
! GAATTTATGTTTACAACTAC+TGG + Chr4:85999855-85999874 MsG0480023495.01.T01:intron 25.0%
! GATATTATAAGGAGATGTTT+GGG + Chr4:85999780-85999799 MsG0480023495.01.T01:intron 25.0%
! GATTACAACAATTACTAACA+AGG - Chr4:86003040-86003059 None:intergenic 25.0%
! GATTAGATTACAGAGAAAAA+AGG + Chr4:85997507-85997526 MsG0480023495.01.T01:five_prime_UTR 25.0%
! TAAACAAGTCTATAAAAGGA+GGG - Chr4:86001983-86002002 None:intergenic 25.0%
! TAAGGACCTGTAAAATTATA+GGG + Chr4:86003106-86003125 MsG0480023495.01.T01:three_prime_UTR 25.0%
! TATAATTTCATGTGCAAGTT+AGG + Chr4:86000040-86000059 MsG0480023495.01.T01:intron 25.0%
! TATCTTCCTGCAAAAAAAAA+AGG - Chr4:86001201-86001220 None:intergenic 25.0%
! TCTAATGTGAGTTTACTTTA+AGG + Chr4:85998426-85998445 MsG0480023495.01.T01:intron 25.0%
! TCTAATTATGCAACAATTCA+TGG - Chr4:86000070-86000089 None:intergenic 25.0%
! TCTCAATAATTGATGAGAAA+AGG - Chr4:85998535-85998554 None:intergenic 25.0%
! TCTCGTATGCATTTATAATA+TGG + Chr4:86002425-86002444 MsG0480023495.01.T01:intron 25.0%
! TGATATTATAAGGAGATGTT+TGG + Chr4:85999779-85999798 MsG0480023495.01.T01:intron 25.0%
! TGTTAGTAATTGTTGTAATC+TGG + Chr4:86003040-86003059 MsG0480023495.01.T01:three_prime_UTR 25.0%
! TTAAACAAGTCTATAAAAGG+AGG - Chr4:86001984-86002003 None:intergenic 25.0%
! TTAAATAACACGATTTAGGT+TGG - Chr4:85998569-85998588 None:intergenic 25.0%
! TTAGATTACAGAGAAAAAAG+GGG + Chr4:85997509-85997528 MsG0480023495.01.T01:five_prime_UTR 25.0%
! TTAGCAAATACAACTCTAAA+CGG - Chr4:85999613-85999632 None:intergenic 25.0%
! TTATTATCAATATATGGCCA+GGG + Chr4:86000300-86000319 MsG0480023495.01.T01:intron 25.0%
! TTGACACGTAAGTAATTAAA+AGG + Chr4:85998163-85998182 MsG0480023495.01.T01:intron 25.0%
! TTTATACGAACACAGAATTT+GGG - Chr4:86001622-86001641 None:intergenic 25.0%
!! AGAAAGTACAATCAATACTA+CGG - Chr4:86000847-86000866 None:intergenic 25.0%
!! ATTAAAAGGTTTTACAACGT+CGG + Chr4:85998177-85998196 MsG0480023495.01.T01:intron 25.0%
!! ATTATTGATGACTATGGATA+TGG + Chr4:85998230-85998249 MsG0480023495.01.T01:intron 25.0%
!! CAAATTGAGATTTAAAATGC+AGG - Chr4:85998327-85998346 None:intergenic 25.0%
!! CAATATTTCGTTGTTTGTTA+TGG + Chr4:85998918-85998937 MsG0480023495.01.T01:intron 25.0%
!! CTAAAAACTTGTCAAGTTTT+TGG + Chr4:85999629-85999648 MsG0480023495.01.T01:intron 25.0%
!! CTACAGCTAAAAAAGTATAT+CGG - Chr4:86002938-86002957 None:intergenic 25.0%
!! CTATTTCCCTATAATTTTAC+AGG - Chr4:86003115-86003134 None:intergenic 25.0%
!! GAAATATGTATTTTCGCATA+AGG - Chr4:85999102-85999121 None:intergenic 25.0%
!! TACAGCTAAAAAAGTATATC+GGG - Chr4:86002937-86002956 None:intergenic 25.0%
!! TATTTTTCACTTCACTAGTA+TGG + Chr4:86000635-86000654 MsG0480023495.01.T01:intron 25.0%
!! TTTATAGTAGTGTTTTTCGT+GGG + Chr4:85999702-85999721 MsG0480023495.01.T01:intron 25.0%
!! TTTGAAACTAAGAAAGGAAT+TGG - Chr4:86002257-86002276 None:intergenic 25.0%
!! TTTTATACGAACACAGAATT+TGG - Chr4:86001623-86001642 None:intergenic 25.0%
!!! AACGTTTTCCTTTTAATTTC+TGG - Chr4:86001335-86001354 None:intergenic 25.0%
!!! AATAGTCCTTTTTTTTTTGC+AGG + Chr4:86001192-86001211 MsG0480023495.01.T01:intron 25.0%
!!! ACTTTTTCTTTCTAAATCGA+GGG + Chr4:86000986-86001005 MsG0480023495.01.T01:intron 25.0%
!!! AGTTAGTATTTGTTGTTATC+TGG + Chr4:86002991-86003010 MsG0480023495.01.T01:three_prime_UTR 25.0%
!!! GAAAATTGATGGATTTTCAT+TGG + Chr4:85998745-85998764 MsG0480023495.01.T01:intron 25.0%
!!! TATGAACATTTTGAAATTGG+TGG - Chr4:85998708-85998727 None:intergenic 25.0%
!!! TCTGTTTTTATCAAGTCTTT+TGG + Chr4:86000771-86000790 MsG0480023495.01.T01:intron 25.0%
!!! TCTTATTTTCTATTTCTGCA+AGG - Chr4:86001459-86001478 None:intergenic 25.0%
!!! TTGATTTTTTTTCTCAATCG+AGG + Chr4:86000538-86000557 MsG0480023495.01.T01:intron 25.0%
!!! TTTTATAAGGCGATTGATTT+AGG + Chr4:86001591-86001610 MsG0480023495.01.T01:intron 25.0%
AAAATATCTCTGTCCATATC+AGG + Chr4:85999348-85999367 MsG0480023495.01.T01:intron 30.0%
AAACAAGTCTATAAAAGGAG+GGG - Chr4:86001982-86002001 None:intergenic 30.0%
ACATTAGTACTTCAGAGAAT+GGG - Chr4:85999457-85999476 None:intergenic 30.0%
AGACGGAGAAGAAAATATAT+AGG - Chr4:86001891-86001910 None:intergenic 30.0%
AGTAAAAGGGGAGAAAAAAT+AGG - Chr4:86002310-86002329 None:intergenic 30.0%
ATATTAAGGCAACCAAAATC+TGG - Chr4:86002372-86002391 None:intergenic 30.0%
ATCAAGCATGAAAAAACTTG+GGG - Chr4:86000199-86000218 None:intergenic 30.0%
ATCTCAGAAAAAGGAGTAAA+AGG - Chr4:86002324-86002343 None:intergenic 30.0%
ATTCATTCTCCTTAGTAAGA+AGG - Chr4:85999738-85999757 None:intergenic 30.0%
CAACTACTGGACTTAAAATT+TGG + Chr4:85999868-85999887 MsG0480023495.01.T01:intron 30.0%
CTTAACATTATTCCCATAGT+GGG - Chr4:86001500-86001519 None:intergenic 30.0%
GAATCAAGCATGAAAAAACT+TGG - Chr4:86000201-86000220 None:intergenic 30.0%
GATAGTTGTAAAGTGACTAT+TGG - Chr4:86001042-86001061 None:intergenic 30.0%
GATGTTCAAAATGTTGTTAC+TGG + Chr4:85997840-85997859 MsG0480023495.01.T01:CDS 30.0%
GTAAAACTATTTCACAGTGA+CGG - Chr4:85998646-85998665 None:intergenic 30.0%
GTAAGGACCTGTAAAATTAT+AGG + Chr4:86003105-86003124 MsG0480023495.01.T01:three_prime_UTR 30.0%
GTTATTATCAATATATGGCC+AGG + Chr4:86000299-86000318 MsG0480023495.01.T01:intron 30.0%
GTTGCATCTAATCTTCATTT+AGG + Chr4:85998363-85998382 MsG0480023495.01.T01:intron 30.0%
TAAAAAAATACTTGCCTGTG+TGG - Chr4:85999430-85999449 None:intergenic 30.0%
TAAGTGTTTCCAAGTTAGTA+AGG + Chr4:86000569-86000588 MsG0480023495.01.T01:intron 30.0%
TAGAGTGTAAACAAAGCAAA+GGG + Chr4:85999493-85999512 MsG0480023495.01.T01:intron 30.0%
TATCACAAGAATAAGTGACT+TGG - Chr4:85999764-85999783 None:intergenic 30.0%
TCGTCAAACTTAATGTAACA+TGG - Chr4:86002816-86002835 None:intergenic 30.0%
TCTCAGAAAAAGGAGTAAAA+GGG - Chr4:86002323-86002342 None:intergenic 30.0%
TCTTAACATTATTCCCATAG+TGG - Chr4:86001501-86001520 None:intergenic 30.0%
TTAATTACTTACGTGTCAAC+CGG - Chr4:85998162-85998181 None:intergenic 30.0%
TTAGAGTGTAAACAAAGCAA+AGG + Chr4:85999492-85999511 MsG0480023495.01.T01:intron 30.0%
TTCATTCTCCTTAGTAAGAA+GGG - Chr4:85999737-85999756 None:intergenic 30.0%
TTCTGCTTACTTCAACAAAT+CGG + Chr4:85997952-85997971 MsG0480023495.01.T01:CDS 30.0%
! AGGAGAATTTTTCTGTGATT+TGG - Chr4:85997688-85997707 None:intergenic 30.0%
! ATTATTGCGTGATTTTTCTG+CGG + Chr4:85997812-85997831 MsG0480023495.01.T01:CDS 30.0%
! GCTTTGTATAGATGCATTTT+TGG + Chr4:86000897-86000916 MsG0480023495.01.T01:intron 30.0%
! GTTTATAGTAGTGTTTTTCG+TGG + Chr4:85999701-85999720 MsG0480023495.01.T01:intron 30.0%
! TAAATTTAGAAGCGTGACAA+AGG + Chr4:86000944-86000963 MsG0480023495.01.T01:intron 30.0%
! TAATACCATTTTGCAGATGA+TGG + Chr4:86000417-86000436 MsG0480023495.01.T01:intron 30.0%
! TTGGTTGCCTTAATATTTTC+CGG + Chr4:86002376-86002395 MsG0480023495.01.T01:intron 30.0%
!! GACTTTTTCTTTCTAAATCG+AGG + Chr4:86000985-86001004 MsG0480023495.01.T01:intron 30.0%
!! TAGGTTTTGTAGTGGAATTT+GGG - Chr4:86001842-86001861 None:intergenic 30.0%
AAAGAAGCTCATTTGTCGAT+GGG + Chr4:85998454-85998473 MsG0480023495.01.T01:intron 35.0%
AAATAGATTGACTGTGCTCT+TGG + Chr4:86003129-86003148 MsG0480023495.01.T01:three_prime_UTR 35.0%
AACAAGATGCATGTGTATCT+TGG - Chr4:85999254-85999273 None:intergenic 35.0%
AACAAGTCTATAAAAGGAGG+GGG - Chr4:86001981-86002000 None:intergenic 35.0%
AAGCCTATCCAAGATTCATA+AGG + Chr4:86001641-86001660 MsG0480023495.01.T01:intron 35.0%
AATTTCATGTGCAAGTTAGG+TGG + Chr4:86000043-86000062 MsG0480023495.01.T01:intron 35.0%
ACAGAAGGAAGACATGAATT+TGG - Chr4:85999172-85999191 None:intergenic 35.0%
ACAGAGAAAAAAGGGGAAAA+AGG + Chr4:85997516-85997535 MsG0480023495.01.T01:five_prime_UTR 35.0%
ACTACTAGTATTCACAGAGT+AGG - Chr4:86002066-86002085 None:intergenic 35.0%
AGATTGAAAGTAACCATTGC+AGG + Chr4:86001303-86001322 MsG0480023495.01.T01:intron 35.0%
AGCAAAGGGTTTATTCAGTT+TGG + Chr4:85999507-85999526 MsG0480023495.01.T01:intron 35.0%
ATTTAGACCCCTTCTTACTA+AGG + Chr4:85999726-85999745 MsG0480023495.01.T01:intron 35.0%
CAACTACTGGACTTAAAGTT+TGG + Chr4:85999991-86000010 MsG0480023495.01.T01:intron 35.0%
CAGAAGGAAGACATGAATTT+GGG - Chr4:85999171-85999190 None:intergenic 35.0%
CAGAGAAAAAAGGGGAAAAA+GGG + Chr4:85997517-85997536 MsG0480023495.01.T01:five_prime_UTR 35.0%
CAGAGAATGGTGAATAAAGA+CGG - Chr4:86001908-86001927 None:intergenic 35.0%
CATTACCATCATCTGCAAAA+TGG - Chr4:86000425-86000444 None:intergenic 35.0%
CCAAAAAGAAGACGAAGAAA+AGG + Chr4:85997730-85997749 MsG0480023495.01.T01:CDS 35.0%
CTACTAGTATTCACAGAGTA+GGG - Chr4:86002065-86002084 None:intergenic 35.0%
CTCAGAAAAAGGAGTAAAAG+GGG - Chr4:86002322-86002341 None:intergenic 35.0%
GAATCGTACTACACTTTAAC+AGG - Chr4:85999555-85999574 None:intergenic 35.0%
GAATTCTTCAGTTGAAACTG+AGG + Chr4:85997755-85997774 MsG0480023495.01.T01:CDS 35.0%
GACATTAGTACTTCAGAGAA+TGG - Chr4:85999458-85999477 None:intergenic 35.0%
GCTTGTGATTTAATCTGCTA+AGG + Chr4:86002517-86002536 MsG0480023495.01.T01:intron 35.0%
GGAAAAGGGAAAGAAATAGA+GGG - Chr4:86001960-86001979 None:intergenic 35.0%
GGAATTGAAAACATACTTCC+AGG - Chr4:86001782-86001801 None:intergenic 35.0%
GGATCACACCAGAAATTAAA+AGG + Chr4:86001324-86001343 MsG0480023495.01.T01:intron 35.0%
GTAATTTCTACACCATCACT+TGG - Chr4:86000462-86000481 None:intergenic 35.0%
GTCTCACATTGAATATGATC+TGG + Chr4:86001756-86001775 MsG0480023495.01.T01:intron 35.0%
TAAAGAAGCTCATTTGTCGA+TGG + Chr4:85998453-85998472 MsG0480023495.01.T01:intron 35.0%
TAATTACTTACGTGTCAACC+GGG - Chr4:85998161-85998180 None:intergenic 35.0%
TACAAACTTGGGTAGAACTT+TGG + Chr4:86001143-86001162 MsG0480023495.01.T01:intron 35.0%
TAGGAAACACAACACAAACA+TGG - Chr4:86002847-86002866 None:intergenic 35.0%
TCATTCTCCTTAGTAAGAAG+GGG - Chr4:85999736-85999755 None:intergenic 35.0%
TCGACAAATGAGCTTCTTTA+CGG - Chr4:85998453-85998472 None:intergenic 35.0%
TGACCTTATGAATCTTGGAT+AGG - Chr4:86001647-86001666 None:intergenic 35.0%
TGAGAATGGGATGTTTCAAA+TGG + Chr4:86002176-86002195 MsG0480023495.01.T01:CDS 35.0%
TGCACTTATTGAAGCAATGA+TGG + Chr4:86002881-86002900 MsG0480023495.01.T01:CDS 35.0%
TGCATACGAGAAACAAAAGT+TGG - Chr4:86002416-86002435 None:intergenic 35.0%
TTCACAACAACAAACTGAAG+TGG - Chr4:86001253-86001272 None:intergenic 35.0%
TTGTGATATGGACAGATAAC+AGG + Chr4:85998993-85999012 MsG0480023495.01.T01:intron 35.0%
TTTCTTTCTAAATCGAGGGA+GGG + Chr4:86000990-86001009 MsG0480023495.01.T01:intron 35.0%
! AAATGGCTGATGATGTAAGT+AGG + Chr4:86002193-86002212 MsG0480023495.01.T01:intron 35.0%
! AATTTCACCGTTTTCGTCAA+TGG - Chr4:85997934-85997953 None:intergenic 35.0%
! ACAAAAGGTTGTCCAGATTT+TGG + Chr4:86002357-86002376 MsG0480023495.01.T01:intron 35.0%
! AGTGTGTTATTGTTCTTCCT+TGG + Chr4:86000712-86000731 MsG0480023495.01.T01:intron 35.0%
! AGTTTGCTTCCTTACTAACT+TGG - Chr4:86000581-86000600 None:intergenic 35.0%
! CCTTTTCTTCGTCTTCTTTT+TGG - Chr4:85997733-85997752 None:intergenic 35.0%
! TGACTTTTGCAACACACTTA+TGG - Chr4:86002712-86002731 None:intergenic 35.0%
! TTGAAATTGGTGGTATGACA+TGG - Chr4:85998698-85998717 None:intergenic 35.0%
! TTTCTTCGTCTTCTTTTTGG+AGG - Chr4:85997730-85997749 None:intergenic 35.0%
! TTTTCTTTCTAAATCGAGGG+AGG + Chr4:86000989-86001008 MsG0480023495.01.T01:intron 35.0%
!! ACTTCAGTTTGTTGTTGTGA+AGG + Chr4:86001252-86001271 MsG0480023495.01.T01:CDS 35.0%
!! AGTTTGACCTTGTCACTTTA+AGG - Chr4:86001088-86001107 None:intergenic 35.0%
!! GATGGATTTTCATTGGATGT+CGG + Chr4:85998752-85998771 MsG0480023495.01.T01:intron 35.0%
!! GTAGGTTTTGTAGTGGAATT+TGG - Chr4:86001843-86001862 None:intergenic 35.0%
!! GTTTGACCTTGTCACTTTAA+GGG - Chr4:86001087-86001106 None:intergenic 35.0%
!! TTTCGTTGTTTGTTATGGGA+TGG + Chr4:85998923-85998942 MsG0480023495.01.T01:intron 35.0%
AAAAGGGGAAAAAGGGAGTA+TGG + Chr4:85997524-85997543 MsG0480023495.01.T01:exon 40.0%
AAACAAAAGCAACACTGGTG+CGG - Chr4:86000747-86000766 None:intergenic 40.0%
AAATTCAGTCTCCTCGTCTA+TGG - Chr4:86002590-86002609 None:intergenic 40.0%
AAGAGGTTCTTCTCTCTTCT+AGG + Chr4:86001382-86001401 MsG0480023495.01.T01:intron 40.0%
AATGAAGTCACATACCACCA+AGG - Chr4:86002617-86002636 None:intergenic 40.0%
ACAAACTGAAGTGGTTCAGA+TGG - Chr4:86001244-86001263 None:intergenic 40.0%
ACATTGAATATGATCTGGCC+TGG + Chr4:86001761-86001780 MsG0480023495.01.T01:intron 40.0%
ACGATAGCAGTAACTGATAG+AGG - Chr4:86001670-86001689 None:intergenic 40.0%
ACTCATTCATCACAGTCACA+GGG + Chr4:85998850-85998869 MsG0480023495.01.T01:intron 40.0%
AGAGGTGACCTTATGAATCT+TGG - Chr4:86001652-86001671 None:intergenic 40.0%
ATAATGCCACTGTTCTCCAA+TGG - Chr4:86002021-86002040 None:intergenic 40.0%
ATATATAGGAGAATTGGCGC+AGG - Chr4:86001877-86001896 None:intergenic 40.0%
ATGGGAAACAAAAGCAACAC+TGG - Chr4:86000752-86000771 None:intergenic 40.0%
CTAAGGCAACATTTGTGAAC+AGG + Chr4:86002534-86002553 MsG0480023495.01.T01:intron 40.0%
CTATAAAAGGAGGGGGAAAA+GGG - Chr4:86001974-86001993 None:intergenic 40.0%
CTGTGTAACAGTACCTGATA+TGG - Chr4:85999364-85999383 None:intergenic 40.0%
CTTCAGTTGAAACTGAGGAT+TGG + Chr4:85997760-85997779 MsG0480023495.01.T01:CDS 40.0%
CTTTCAGAAGCTTGTACAAG+TGG - Chr4:86001285-86001304 None:intergenic 40.0%
GAACCAAGCAATACTCACTA+TGG - Chr4:85997985-85998004 None:intergenic 40.0%
GAAGAAGAAGAAGAAGAAGG+AGG - Chr4:85997708-85997727 None:intergenic 40.0%
GACTGAATTTAATGCCTTGG+TGG + Chr4:86002600-86002619 MsG0480023495.01.T01:CDS 40.0%
GAGGAAGAAGAAGAAGAAGA+AGG - Chr4:85997711-85997730 None:intergenic 40.0%
GATATACTTGACTTCCACAC+AGG + Chr4:85999413-85999432 MsG0480023495.01.T01:intron 40.0%
GGAGACTGAATTTAATGCCT+TGG + Chr4:86002597-86002616 MsG0480023495.01.T01:CDS 40.0%
GGGAAAAGGGAAAGAAATAG+AGG - Chr4:86001961-86001980 None:intergenic 40.0%
GTGCTCTTCAATATTTGCAC+AGG - Chr4:85998273-85998292 None:intergenic 40.0%
GTTCTACCCAAGTTTGTATC+AGG - Chr4:86001141-86001160 None:intergenic 40.0%
GTTTGTGTTGTGTTTCCTAC+AGG + Chr4:86002848-86002867 MsG0480023495.01.T01:intron 40.0%
TACGAACACAGAATTTGGGT+TGG - Chr4:86001618-86001637 None:intergenic 40.0%
TACTCATTCATCACAGTCAC+AGG + Chr4:85998849-85998868 MsG0480023495.01.T01:intron 40.0%
TATTTGTGCAGGGTGAGAAT+GGG + Chr4:86002163-86002182 MsG0480023495.01.T01:intron 40.0%
TCACAATCAGACATGACAGT+TGG - Chr4:86000239-86000258 None:intergenic 40.0%
TCCAACGGAAGGTTATTCAT+AGG - Chr4:85998081-85998100 None:intergenic 40.0%
TCCTATGAATAACCTTCCGT+TGG + Chr4:85998077-85998096 MsG0480023495.01.T01:CDS 40.0%
TCTATAAAAGGAGGGGGAAA+AGG - Chr4:86001975-86001994 None:intergenic 40.0%
TGAGAGTCGTTCTCATTTCT+AGG - Chr4:86001803-86001822 None:intergenic 40.0%
TTATTTGTGCAGGGTGAGAA+TGG + Chr4:86002162-86002181 MsG0480023495.01.T01:intron 40.0%
TTCTCACCCTGCACAAATAA+AGG - Chr4:86002162-86002181 None:intergenic 40.0%
TTCTTTCTAAATCGAGGGAG+GGG + Chr4:86000991-86001010 MsG0480023495.01.T01:intron 40.0%
! AACTTGGCCTTTATTTGTGC+AGG + Chr4:86002152-86002171 MsG0480023495.01.T01:intron 40.0%
! ACATGCATCTTGTTTACAGC+GGG + Chr4:85999260-85999279 MsG0480023495.01.T01:CDS 40.0%
! ACGAACACAGAATTTGGGTT+GGG - Chr4:86001617-86001636 None:intergenic 40.0%
! ACTTGGCCTTTATTTGTGCA+GGG + Chr4:86002153-86002172 MsG0480023495.01.T01:intron 40.0%
! ATAAGGAGATGTTTGGGACT+TGG + Chr4:85999786-85999805 MsG0480023495.01.T01:intron 40.0%
! ATATTGAAGAGCACACCTGA+TGG + Chr4:85998279-85998298 MsG0480023495.01.T01:CDS 40.0%
! CACATGCATCTTGTTTACAG+CGG + Chr4:85999259-85999278 MsG0480023495.01.T01:CDS 40.0%
! GATGATGGTAATGAAGTGGA+TGG + Chr4:86000432-86000451 MsG0480023495.01.T01:intron 40.0%
! TAAGGAGATGTTTGGGACTT+GGG + Chr4:85999787-85999806 MsG0480023495.01.T01:intron 40.0%
! TCACCATAGTGAGTATTGCT+TGG + Chr4:85997979-85997998 MsG0480023495.01.T01:intron 40.0%
! TCGCTGATCTAAAACACAGA+AGG - Chr4:85999187-85999206 None:intergenic 40.0%
! TCTGGACAACCTTTTGTAAG+TGG - Chr4:86002354-86002373 None:intergenic 40.0%
! TGCAGATGATGGTAATGAAG+TGG + Chr4:86000428-86000447 MsG0480023495.01.T01:intron 40.0%
!! AAAAGGCGCTAAACAACAGT+TGG - Chr4:85998518-85998537 None:intergenic 40.0%
!! ATCAGAGTGCCACTTACAAA+AGG + Chr4:86002342-86002361 MsG0480023495.01.T01:intron 40.0%
!! TCAAGTCTTTTGGAAGATCG+TGG + Chr4:86000781-86000800 MsG0480023495.01.T01:intron 40.0%
!! TGAATGTATGTTGCTTTGCC+CGG + Chr4:85998140-85998159 MsG0480023495.01.T01:CDS 40.0%
!! TTCTGTGTTTTAGATCAGCG+AGG + Chr4:85999186-85999205 MsG0480023495.01.T01:intron 40.0%
!!! AAGGTTGGTAGGTTTTGTAG+TGG - Chr4:86001850-86001869 None:intergenic 40.0%
AAGATGCCTGTCATTGCCAT+TGG + Chr4:86002002-86002021 MsG0480023495.01.T01:intron 45.0%
AAGGACTTCAAATCTCGTCG+GGG - Chr4:86001064-86001083 None:intergenic 45.0%
AATGTTCAGTCCTGGACATG+AGG + Chr4:86001710-86001729 MsG0480023495.01.T01:intron 45.0%
ACCTTCCAAATGTTCAGTCC+TGG + Chr4:86001702-86001721 MsG0480023495.01.T01:intron 45.0%
AGACGGCCTGATACAAACTT+GGG + Chr4:86001132-86001151 MsG0480023495.01.T01:intron 45.0%
ATGTTCAGTCCTGGACATGA+GGG + Chr4:86001711-86001730 MsG0480023495.01.T01:intron 45.0%
CATGTCCAGGACTGAACATT+TGG - Chr4:86001710-86001729 None:intergenic 45.0%
CATTTGGAAGGTGACTTGAG+TGG - Chr4:86001694-86001713 None:intergenic 45.0%
CATTTGTGAACAGGACTTGC+TGG + Chr4:86002543-86002562 MsG0480023495.01.T01:intron 45.0%
GAAAGAAATAGAGGGAGTCG+GGG - Chr4:86001952-86001971 None:intergenic 45.0%
GAAGGACTTCAAATCTCGTC+GGG - Chr4:86001065-86001084 None:intergenic 45.0%
GAATGCGTTTATCATCACCC+TGG - Chr4:86000320-86000339 None:intergenic 45.0%
GCCACAGCCGGAAAATATTA+AGG - Chr4:86002386-86002405 None:intergenic 45.0%
GCTCAGGTCAATGAGCAAAT+TGG - Chr4:86003166-86003185 None:intergenic 45.0%
GGAAAGAAATAGAGGGAGTC+GGG - Chr4:86001953-86001972 None:intergenic 45.0%
GGAAGGACTTCAAATCTCGT+CGG - Chr4:86001066-86001085 None:intergenic 45.0%
GGCACTCTGATCTCAGAAAA+AGG - Chr4:86002333-86002352 None:intergenic 45.0%
GGGAAAGAAATAGAGGGAGT+CGG - Chr4:86001954-86001973 None:intergenic 45.0%
GGGTTTGCCATTGACGAAAA+CGG + Chr4:85997924-85997943 MsG0480023495.01.T01:CDS 45.0%
GTCCTTCCCTTAAAGTGACA+AGG + Chr4:86001078-86001097 MsG0480023495.01.T01:intron 45.0%
TCATTGCCATTGGAGAACAG+TGG + Chr4:86002012-86002031 MsG0480023495.01.T01:intron 45.0%
TCCAGGACTGAACATTTGGA+AGG - Chr4:86001706-86001725 None:intergenic 45.0%
TCTTTCTAAATCGAGGGAGG+GGG + Chr4:86000992-86001011 MsG0480023495.01.T01:intron 45.0%
TGGGGTGATGCGAAAATTGA+TGG + Chr4:85998734-85998753 MsG0480023495.01.T01:intron 45.0%
TGTTCTCCAATGGCAATGAC+AGG - Chr4:86002011-86002030 None:intergenic 45.0%
TTTGCTCATTGACCTGAGCA+CGG + Chr4:86003167-86003186 MsG0480023495.01.T01:three_prime_UTR 45.0%
! GCCTTAATATTTTCCGGCTG+TGG + Chr4:86002382-86002401 MsG0480023495.01.T01:intron 45.0%
! GTTTTCGTCAATGGCAAACC+CGG - Chr4:85997925-85997944 None:intergenic 45.0%
! TGTAGTGGAATTTGGGACTG+CGG - Chr4:86001835-86001854 None:intergenic 45.0%
! TTTCTGGTGTGATCCTGCAA+TGG - Chr4:86001319-86001338 None:intergenic 45.0%
!! GACCTTGTCACTTTAAGGGA+AGG - Chr4:86001083-86001102 None:intergenic 45.0%
!! GTTGTTACTGGTGTTGCTTC+TGG + Chr4:85997852-85997871 MsG0480023495.01.T01:CDS 45.0%
!! TGTGTTTTAGATCAGCGAGG+AGG + Chr4:85999189-85999208 MsG0480023495.01.T01:intron 45.0%
!! TAGAAAAAAAAAAAAAAAAA+GGG - Chr4:85999129-85999148 None:intergenic 5.0%
AAAAGTCTGCATCAAGCCCG+AGG - Chr4:86000972-86000991 None:intergenic 50.0%
AAGCGTGACAAAGGAACCTC+GGG + Chr4:86000953-86000972 MsG0480023495.01.T01:intron 50.0%
AATTGCAACTGCTGCTGCTG+AGG - Chr4:85997562-85997581 None:intergenic 50.0%
ACACAATCTCCCTCATGTCC+AGG - Chr4:86001723-86001742 None:intergenic 50.0%
CAGACGGCCTGATACAAACT+TGG + Chr4:86001131-86001150 MsG0480023495.01.T01:intron 50.0%
CGGTAAAATCAACCGTGCTC+AGG - Chr4:86003182-86003201 None:intergenic 50.0%
CTTACAGCTGACCATCCATC+AGG - Chr4:85998297-85998316 None:intergenic 50.0%
GAAGCGTGACAAAGGAACCT+CGG + Chr4:86000952-86000971 MsG0480023495.01.T01:intron 50.0%
GTGCAGCTTCTTCTTCCTGT+AGG - Chr4:86002866-86002885 None:intergenic 50.0%
TAACCTTCCGTTGGAGTGTG+TGG + Chr4:85998086-85998105 MsG0480023495.01.T01:CDS 50.0%
TACTGTTACACAGCACGTGG+CGG + Chr4:85999371-85999390 MsG0480023495.01.T01:CDS 50.0%
TATAGGAGAATTGGCGCAGG+AGG - Chr4:86001874-86001893 None:intergenic 50.0%
TCCTGATGATATGCCGTTGC+CGG + Chr4:85997890-85997909 MsG0480023495.01.T01:CDS 50.0%
TCTATGGCGTCAATGACAGC+AGG - Chr4:86002574-86002593 None:intergenic 50.0%
TGGTGCGGTAATACAGACCA+AGG - Chr4:86000732-86000751 None:intergenic 50.0%
TGTCATTGACGCCATAGACG+AGG + Chr4:86002576-86002595 MsG0480023495.01.T01:CDS 50.0%
TTCCGTTGGAGTGTGTGGTT+CGG + Chr4:85998091-85998110 MsG0480023495.01.T01:CDS 50.0%
! AGGTACTGTTACACAGCACG+TGG + Chr4:85999368-85999387 MsG0480023495.01.T01:intron 50.0%
! TGAAGAGCACACCTGATGGA+TGG + Chr4:85998283-85998302 MsG0480023495.01.T01:CDS 50.0%
ATTGGCGCAGGAGGAAAGGT+TGG - Chr4:86001865-86001884 None:intergenic 55.0%
CTCCGAACCACACACTCCAA+CGG - Chr4:85998096-85998115 None:intergenic 55.0%
GAACCACACACTCCAACGGA+AGG - Chr4:85998092-85998111 None:intergenic 55.0%
GAGAATTGGCGCAGGAGGAA+AGG - Chr4:86001869-86001888 None:intergenic 55.0%
GGACAGATGGGAGCAGAGAA+TGG - Chr4:86001921-86001940 None:intergenic 55.0%
GGGGTGCAATGAGGACAGAT+GGG - Chr4:86001933-86001952 None:intergenic 55.0%
TCCGGCAACGGCATATCATC+AGG - Chr4:85997894-85997913 None:intergenic 55.0%
TCGTCAATGGCAAACCCGGT+GGG - Chr4:85997921-85997940 None:intergenic 55.0%
TTCGTCAATGGCAAACCCGG+TGG - Chr4:85997922-85997941 None:intergenic 55.0%
TTTGTATCAGGCCGTCTGCG+AGG - Chr4:86001129-86001148 None:intergenic 55.0%
! CTGAGTTGACACCTCGCAGA+CGG + Chr4:86001115-86001134 MsG0480023495.01.T01:intron 55.0%
! GTGGATGGCTTGCCAAGTGA+TGG + Chr4:86000447-86000466 MsG0480023495.01.T01:CDS 55.0%
! TCTGCGAGGTGTCAACTCAG+TGG - Chr4:86001115-86001134 None:intergenic 55.0%
CGGGGTGCAATGAGGACAGA+TGG - Chr4:86001934-86001953 None:intergenic 60.0%
GTTGGAACGCATGCCACAGC+CGG - Chr4:86002398-86002417 None:intergenic 60.0%
TCAATGGCAAACCCGGTGGG+AGG - Chr4:85997918-85997937 None:intergenic 60.0%
! GCGCAGGAGGAAAGGTTGGT+AGG - Chr4:86001861-86001880 None:intergenic 60.0%
GAGGGAGTCGGGGTGCAATG+AGG - Chr4:86001942-86001961 None:intergenic 65.0%
GCAAACCCGGTGGGAGGTTC+CGG - Chr4:85997912-85997931 None:intergenic 65.0%
CCGGTGGGAGGTTCCGGCAA+CGG - Chr4:85997906-85997925 None:intergenic 70.0%
CCGTTGCCGGAACCTCCCAC+CGG + Chr4:85997903-85997922 MsG0480023495.01.T01:CDS 70.0%
CGTTGCCGGAACCTCCCACC+GGG + Chr4:85997904-85997923 MsG0480023495.01.T01:CDS 70.0%
GCGAGCGCATACGCTGCAGC+AGG - Chr4:85999232-85999251 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 85997489 86003265 85997489 ID=MsG0480023495.01;Name=MsG0480023495.01
Chr4 mRNA 85997489 86003265 85997489 ID=MsG0480023495.01.T01;Parent=MsG0480023495.01;Name=MsG0480023495.01.T01;_AED=0.40;_eAED=0.40;_QI=54|0.88|0.9|1|1|1|10|339|322
Chr4 exon 85997489 85997986 85997489 ID=MsG0480023495.01.T01:exon:2930;Parent=MsG0480023495.01.T01
Chr4 exon 85998072 85998169 85998072 ID=MsG0480023495.01.T01:exon:2931;Parent=MsG0480023495.01.T01
Chr4 exon 85998269 85998311 85998269 ID=MsG0480023495.01.T01:exon:2932;Parent=MsG0480023495.01.T01
Chr4 exon 85999199 85999281 85999199 ID=MsG0480023495.01.T01:exon:2933;Parent=MsG0480023495.01.T01
Chr4 exon 85999370 85999392 85999370 ID=MsG0480023495.01.T01:exon:2934;Parent=MsG0480023495.01.T01
Chr4 exon 86000433 86000494 86000433 ID=MsG0480023495.01.T01:exon:2935;Parent=MsG0480023495.01.T01
Chr4 exon 86001214 86001273 86001214 ID=MsG0480023495.01.T01:exon:2936;Parent=MsG0480023495.01.T01
Chr4 exon 86002174 86002206 86002174 ID=MsG0480023495.01.T01:exon:2937;Parent=MsG0480023495.01.T01
Chr4 exon 86002556 86002621 86002556 ID=MsG0480023495.01.T01:exon:2938;Parent=MsG0480023495.01.T01
Chr4 exon 86002870 86003265 86002870 ID=MsG0480023495.01.T01:exon:2939;Parent=MsG0480023495.01.T01
Chr4 five_prime_UTR 85997489 85997542 85997489 ID=MsG0480023495.01.T01:five_prime_utr;Parent=MsG0480023495.01.T01
Chr4 CDS 85997543 85997986 85997543 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 85998072 85998169 85998072 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 85998269 85998311 85998269 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 85999199 85999281 85999199 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 85999370 85999392 85999370 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 86000433 86000494 86000433 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 86001214 86001273 86001214 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 86002174 86002206 86002174 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 86002556 86002621 86002556 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 CDS 86002870 86002926 86002870 ID=MsG0480023495.01.T01:cds;Parent=MsG0480023495.01.T01
Chr4 three_prime_UTR 86002927 86003265 86002927 ID=MsG0480023495.01.T01:three_prime_utr;Parent=MsG0480023495.01.T01
Gene Sequence

>MsG0480023495.01.T01

ATGGCGCTACGTTGCTCCTCAGCAGCAGCAGTTGCAATTTTCAAATCTTGTGTCTCTCTAAAATCACACATATTTCCAATTTCAGTTTCATTTCAAAACCTTAATTCTCATTCCAATTCTTCTACAATTTTCTGTACTGCAACCAAATCACAGAAAAATTCTCCTCCTTCTTCTTCTTCTTCTTCCTCCAAAAAGAAGACGAAGAAAAGGAAGAATTCTTCAGTTGAAACTGAGGATTGGAAAAATTTGAATTCCAATACTGATTTTGAATTATTGCGTGATTTTTCTGCGGATAATGATGTTCAAAATGTTGTTACTGGTGTTGCTTCTGGTTCCTCTTTATTTTATCCTGATGATATGCCGTTGCCGGAACCTCCCACCGGGTTTGCCATTGACGAAAACGGTGAAATTCTGCTTACTTCAACAAATCGGCTTATCACCATAGTTGATCCTATGAATAACCTTCCGTTGGAGTGTGTGGTTCGGAGAATGTTCAAGAGTTCTGATAGAGATGAATGTATGTTGCTTTGCCCGGTTGACACGCCTGTGCAAATATTGAAGAGCACACCTGATGGATGGTCAGCTATCAGCGAGGAGGAAGTTGAATCTATTCTGCCTGCTGCAGCGTATGCGCTCGCCAAGATACACATGCATCTTGTTTACAGCGGGTACTGTTACACAGCACGTGGCGATGATGGTAATGAAGTGGATGGCTTGCCAAGTGATGGTGTAGAAATTACATATTTTGATCTGGAAGATACTCGCTACATGATTTATACACCATCTGAACCACTTCAGTTTGTTGTTGTGAAGGGTGAGAATGGGATGTTTCAAATGGCTGATGATGACTTGCTGGATGATCCTGCTGTCATTGACGCCATAGACGAGGAGACTGAATTTAATGCCTTGGTGGAAGAAGAAGCTGCACTTATTGAAGCAATGATGGATGAAAGCAATGATGATGAATGA

Protein sequence

>MsG0480023495.01.T01

MALRCSSAAAVAIFKSCVSLKSHIFPISVSFQNLNSHSNSSTIFCTATKSQKNSPPSSSSSSSKKKTKKRKNSSVETEDWKNLNSNTDFELLRDFSADNDVQNVVTGVASGSSLFYPDDMPLPEPPTGFAIDENGEILLTSTNRLITIVDPMNNLPLECVVRRMFKSSDRDECMLLCPVDTPVQILKSTPDGWSAISEEEVESILPAAAYALAKIHMHLVYSGYCYTARGDDGNEVDGLPSDGVEITYFDLEDTRYMIYTPSEPLQFVVVKGENGMFQMADDDLLDDPAVIDAIDEETEFNALVEEEAALIEAMMDESNDDE*