AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780039611.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039611.01.T01 MTR_7g076080 89.541 392 4 1 1 355 109 500 0.0 713
MsG0780039611.01.T01 MTR_8g432540 75.377 398 52 5 1 355 133 527 0.0 600
MsG0780039611.01.T01 MTR_1g101280 57.750 400 122 5 1 355 74 471 2.91e-157 460
MsG0780039611.01.T01 MTR_0198s0030 50.860 407 146 9 1 358 73 474 1.64e-136 407
MsG0780039611.01.T01 MTR_4g047800 51.444 381 151 8 1 354 78 451 3.98e-126 380
MsG0780039611.01.T01 MTR_2g088470 50.646 387 154 8 1 358 85 463 4.94e-124 374
MsG0780039611.01.T01 MTR_6g477820 46.465 396 172 8 1 358 47 440 9.88e-113 345
MsG0780039611.01.T01 MTR_5g029320 44.584 397 177 9 1 358 107 499 9.43e-109 337
MsG0780039611.01.T01 MTR_2g101720 43.288 365 198 4 1 358 157 519 1.90e-99 312
MsG0780039611.01.T01 MTR_7g427710 44.474 371 167 8 1 358 34 378 2.31e-94 295
MsG0780039611.01.T01 MTR_5g005600 39.744 390 198 8 1 358 63 447 2.39e-82 265
MsG0780039611.01.T01 MTR_2g030570 34.646 381 215 7 1 352 42 417 4.14e-70 233
MsG0780039611.01.T01 MTR_2g030600 32.376 383 219 6 1 352 42 415 4.80e-66 222
MsG0780039611.01.T01 MTR_2g030660 33.425 362 214 11 1 352 33 377 2.23e-59 203
MsG0780039611.01.T01 MTR_7g427700 41.636 269 122 5 1 257 34 279 2.02e-57 193
MsG0780039611.01.T01 MTR_7g427690 45.133 226 114 4 140 358 57 279 1.37e-56 191
MsG0780039611.01.T01 MTR_2g083350 31.048 248 131 5 145 358 22 263 1.73e-32 128
MsG0780039611.01.T01 MTR_7g027265 52.941 102 48 0 1 102 35 136 9.25e-32 117
MsG0780039611.01.T01 MTR_2g083330 29.675 246 132 4 145 358 19 255 3.93e-30 121
MsG0780039611.01.T01 MTR_5g046040 53.398 103 48 0 1 103 52 154 4.24e-30 119
MsG0780039611.01.T01 MTR_1g105420 33.854 192 95 6 38 199 1 190 1.01e-23 98.2
MsG0780039611.01.T01 MTR_2g451350 36.029 136 77 2 152 282 1 131 5.02e-22 91.3
MsG0780039611.01.T01 MTR_7g027605 49.462 93 44 2 228 320 2 91 5.87e-22 89.4
MsG0780039611.01.T01 MTR_8g013980 23.913 368 226 11 1 359 30 352 6.60e-16 79.7
MsG0780039611.01.T01 MTR_2g030130 23.238 383 221 11 1 361 28 359 2.10e-14 75.1
MsG0780039611.01.T01 MTR_2g101190 23.037 382 215 12 1 359 29 354 4.13e-14 74.3
MsG0780039611.01.T01 MTR_3g109800 23.514 370 224 12 1 359 35 356 1.05e-12 69.7
MsG0780039611.01.T01 MTR_3g109800 23.370 368 227 11 1 359 35 356 1.20e-12 69.7
MsG0780039611.01.T01 MTR_3g109800 23.370 368 227 11 1 359 35 356 1.29e-12 69.7
MsG0780039611.01.T01 MTR_6g027290 31.683 101 68 1 7 106 49 149 1.47e-12 65.9
MsG0780039611.01.T01 MTR_4g058970 23.684 380 218 14 1 363 43 367 1.57e-11 66.2
MsG0780039611.01.T01 MTR_2g094520 23.098 368 229 11 1 359 38 360 2.60e-11 65.5
MsG0780039611.01.T01 MTR_2g451350 33.333 75 50 0 208 282 18 92 3.13e-11 60.1
MsG0780039611.01.T01 MTR_7g427670 45.714 70 27 1 37 106 32 90 7.57e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780039611.01.T01 AT4G00730 65.969 382 96 4 1 355 152 526 9.64e-179 509
MsG0780039611.01.T01 AT4G00730 65.969 382 96 4 1 355 152 526 5.22e-176 510
MsG0780039611.01.T01 AT3G61150 61.916 407 96 7 1 358 128 524 9.73e-172 499
MsG0780039611.01.T01 AT4G04890 50.000 386 159 5 1 358 80 459 1.75e-127 384
MsG0780039611.01.T01 AT4G04890 50.000 386 159 5 1 358 80 459 1.75e-127 384
MsG0780039611.01.T01 AT5G52170 51.944 360 137 7 1 352 75 406 1.26e-124 374
MsG0780039611.01.T01 AT5G52170 51.944 360 137 7 1 352 75 406 1.26e-124 374
MsG0780039611.01.T01 AT5G52170 51.944 360 137 7 1 352 75 406 1.77e-124 374
MsG0780039611.01.T01 AT4G21750 49.367 395 156 7 1 358 80 467 1.08e-123 374
MsG0780039611.01.T01 AT4G21750 49.367 395 156 7 1 358 80 467 1.08e-123 374
MsG0780039611.01.T01 AT4G21750 49.367 395 156 7 1 358 80 467 1.08e-123 374
MsG0780039611.01.T01 AT4G21750 49.367 395 156 7 1 358 80 467 1.08e-123 374
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 1.55e-111 338
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 1.87e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G05230 45.288 382 173 6 1 358 82 451 2.05e-110 339
MsG0780039611.01.T01 AT1G73360 43.284 402 174 8 2 358 51 443 9.98e-104 322
MsG0780039611.01.T01 AT1G17920 41.397 401 174 8 2 358 40 423 7.08e-98 305
MsG0780039611.01.T01 AT1G17920 41.397 401 174 8 2 358 40 423 7.08e-98 305
MsG0780039611.01.T01 AT2G32370 42.147 382 192 5 1 360 86 460 1.56e-97 305
MsG0780039611.01.T01 AT1G79840 42.308 364 194 5 1 358 119 472 3.43e-95 293
MsG0780039611.01.T01 AT1G79840 42.308 364 194 5 1 358 119 472 4.59e-94 294
MsG0780039611.01.T01 AT1G79840 42.308 364 194 5 1 358 61 414 1.33e-93 294
MsG0780039611.01.T01 AT1G79840 42.308 364 194 5 1 358 61 414 1.33e-93 294
MsG0780039611.01.T01 AT1G79840 42.308 364 194 5 1 358 119 472 4.90e-93 294
MsG0780039611.01.T01 AT1G79840 42.308 364 194 5 1 358 148 501 1.60e-92 293
MsG0780039611.01.T01 AT4G17710 43.288 365 179 10 1 358 106 449 6.69e-84 269
MsG0780039611.01.T01 AT5G46880 39.952 418 190 11 1 360 129 543 2.21e-81 265
MsG0780039611.01.T01 AT5G46880 39.952 418 190 11 1 360 129 543 2.21e-81 265
MsG0780039611.01.T01 AT5G46880 39.952 418 190 11 1 360 129 543 2.21e-81 265
MsG0780039611.01.T01 AT4G25530 39.200 375 201 10 1 358 58 422 2.23e-78 254
MsG0780039611.01.T01 AT3G03260 34.726 383 213 9 2 354 42 417 1.44e-67 223
MsG0780039611.01.T01 AT3G03260 34.726 383 213 9 2 354 42 417 3.64e-66 222
MsG0780039611.01.T01 AT5G17320 31.296 409 217 9 2 355 45 444 5.98e-57 197
MsG0780039611.01.T01 AT1G34650 30.882 408 224 10 1 355 34 436 1.27e-50 180
MsG0780039611.01.T01 AT5G07260 29.097 299 172 10 49 342 10 273 1.76e-24 105
MsG0780039611.01.T01 AT5G07260 29.097 299 172 10 49 342 10 273 1.79e-24 105
MsG0780039611.01.T01 AT1G30490 23.560 382 222 12 1 361 36 368 1.54e-14 75.9
MsG0780039611.01.T01 AT4G32880 22.581 372 230 13 1 359 30 356 4.48e-14 74.3
MsG0780039611.01.T01 AT2G34710 23.607 377 228 14 1 361 40 372 3.70e-13 71.6
MsG0780039611.01.T01 AT5G60690 23.797 374 222 13 1 363 40 361 6.44e-12 67.8
MsG0780039611.01.T01 AT1G52150 22.973 370 230 14 1 359 32 357 5.95e-11 64.7
MsG0780039611.01.T01 AT1G52150 22.727 374 234 14 1 363 32 361 6.06e-11 64.7
MsG0780039611.01.T01 AT1G52150 22.727 374 234 14 1 363 32 361 7.04e-11 64.3

Find 175 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTTGTGTTCTTCTATTT+TGG 0.092193 7:+66690636 None:intergenic
GGCTCTTGTTGAAACTTTAA+TGG 0.179447 7:-66689734 MsG0780039611.01.T01:CDS
CAGTTGTAGAGCACCATTTC+TGG 0.218972 7:+66689167 None:intergenic
ATGCCTTTAGGTCAAGATTT+TGG 0.233318 7:-66690066 MsG0780039611.01.T01:intron
GTGATATCTAGTGGAATAAA+TGG 0.274598 7:-66689192 MsG0780039611.01.T01:CDS
CACAAACTAATGAGCCTCTT+TGG 0.274681 7:-66689900 MsG0780039611.01.T01:CDS
AGCTTCTCTGATGGTATCTA+TGG 0.310496 7:+66688897 None:intergenic
ATCCAAGACTTGGTTGGGTT+TGG 0.318370 7:-66684109 MsG0780039611.01.T01:three_prime_UTR
AAACAAGACAAGTCAAGTTT+TGG 0.322654 7:-66690661 MsG0780039611.01.T01:CDS
GCTAAGCTTAGGCATGGTTT+TGG 0.335900 7:-66686690 MsG0780039611.01.T01:CDS
ACTTAGCAAAAGGCTTTGTT+TGG 0.341498 7:-66690684 MsG0780039611.01.T01:CDS
CAAAGGAAAGGGTGGTGGTT+CGG 0.348915 7:-66684077 MsG0780039611.01.T01:three_prime_UTR
TATGTTTCTTGAACTTGCTT+TGG 0.349553 7:-66689950 MsG0780039611.01.T01:CDS
AACTGTAGGAGGCTTCCTTC+TGG 0.355417 7:-66688850 MsG0780039611.01.T01:CDS
GGTGCACAAATGGAACAAAT+TGG 0.362490 7:-66686360 MsG0780039611.01.T01:three_prime_UTR
TTCATTACTACATGCATTGC+AGG 0.364670 7:+66684797 None:intergenic
GGAATGTGGGCGAGGACGTT+AGG 0.365992 7:-66686332 MsG0780039611.01.T01:three_prime_UTR
AAAGGAAAGGGTGGTGGTTC+GGG 0.368318 7:-66684076 MsG0780039611.01.T01:three_prime_UTR
CACAAAAGTTGTTTGTCATT+CGG 0.369193 7:+66686402 None:intergenic
TGAACTTGCTTTGGCTGCAA+TGG 0.370269 7:-66689941 MsG0780039611.01.T01:CDS
ATTATTAGTACTCCTTGTAT+TGG 0.382879 7:-66689823 MsG0780039611.01.T01:CDS
GCCTCAGAAACAAAACCATT+TGG 0.385246 7:+66689793 None:intergenic
GTCTATAGAGCTGGTGAACT+TGG 0.390142 7:+66686717 None:intergenic
GTGCATCGACGGTGCACAAA+TGG 0.392526 7:-66686370 MsG0780039611.01.T01:three_prime_UTR
TTTGTTCCTCTTGTAATTGA+AGG 0.396389 7:+66690024 None:intergenic
TATGCCAAATGGTTACTCTA+AGG 0.401101 7:-66688812 MsG0780039611.01.T01:intron
AGCAGCATGCAGAAGGGGTA+TGG 0.402136 7:-66688936 MsG0780039611.01.T01:CDS
ATTTCCTGCAGTCGTGATAA+TGG 0.402875 7:+66684379 None:intergenic
TTGATTATATCAGACTCAAT+TGG 0.408893 7:-66690383 MsG0780039611.01.T01:intron
GTTGCCATGGTCATGTCCTT+TGG 0.409163 7:+66686126 None:intergenic
AATTACAAGAGGAACAAATA+TGG 0.409950 7:-66690019 MsG0780039611.01.T01:CDS
GTAGACTGTTCACAAGTATC+TGG 0.411280 7:+66684639 None:intergenic
TGAGTATCCAAGACTTGGTT+GGG 0.412311 7:-66684114 MsG0780039611.01.T01:three_prime_UTR
GGAATAAATGGAACCAGAAA+TGG 0.422357 7:-66689180 MsG0780039611.01.T01:CDS
ATTACCTTAGAGTAACCATT+TGG 0.422663 7:+66688808 None:intergenic
CTCCCGTCGCTATGTCCATC+TGG 0.423743 7:+66684722 None:intergenic
AATTCAGTTTCGTAGTTATG+AGG 0.433481 7:-66684343 MsG0780039611.01.T01:three_prime_UTR
CACAATCCCCGTGGCTCACC+CGG 0.434775 7:+66686282 None:intergenic
AAGGAAGAGTGTGGATGATC+CGG 0.443006 7:-66686301 MsG0780039611.01.T01:three_prime_UTR
TGTATTGGTTTAAAACCAAA+TGG 0.443568 7:-66689808 MsG0780039611.01.T01:CDS
GGATGATCCGGGTGAGCCAC+GGG 0.449936 7:-66686289 MsG0780039611.01.T01:three_prime_UTR
GAAACAAACACAGACGCATC+GGG 0.454001 7:-66684849 MsG0780039611.01.T01:three_prime_UTR
CAGAAATGGTGCTCTACAAC+TGG 0.456843 7:-66689166 MsG0780039611.01.T01:intron
GACATTCACATTGGCGTTGG+AGG 0.461547 7:+66686646 None:intergenic
GTGAGTATCCAAGACTTGGT+TGG 0.466609 7:-66684115 MsG0780039611.01.T01:three_prime_UTR
ATCCAAACCCAACCAAGTCT+TGG 0.467801 7:+66684107 None:intergenic
AGAAAACTCACCTCACGAAC+AGG 0.469601 7:+66688970 None:intergenic
TTATCACGTTATAGTTATTG+AGG 0.473046 7:+66684263 None:intergenic
TGGATACTCACCACCATTCA+AGG 0.475798 7:+66684127 None:intergenic
TTATGTTGCGCTTCTTCCGT+CGG 0.480355 7:-66684759 MsG0780039611.01.T01:three_prime_UTR
AAAGACTTGAACTTAGCAAA+AGG 0.481146 7:-66690694 MsG0780039611.01.T01:CDS
TTAGTGCAGCAACCTCAGTT+TGG 0.483693 7:-66686258 MsG0780039611.01.T01:three_prime_UTR
GAATGTGGGCGAGGACGTTA+GGG 0.487936 7:-66686331 MsG0780039611.01.T01:three_prime_UTR
ACGAGAAGCTTAGAAGTGAA+TGG 0.489778 7:-66686195 MsG0780039611.01.T01:three_prime_UTR
TATGTTGCGCTTCTTCCGTC+GGG 0.492269 7:-66684758 MsG0780039611.01.T01:three_prime_UTR
TGGATTAGAAGTGTTGAAAG+TGG 0.496742 7:-66689880 MsG0780039611.01.T01:CDS
CGCGGTGGAATCAGTGGAAA+CGG 0.501703 7:-66684603 MsG0780039611.01.T01:three_prime_UTR
TCAATTTGAGAGATTGAAAG+TGG 0.502526 7:-66684204 MsG0780039611.01.T01:three_prime_UTR
ATACCTGAGTGTTCTCTAGC+GGG 0.506667 7:+66686597 None:intergenic
CTAGACATTCACATTGGCGT+TGG 0.506942 7:+66686643 None:intergenic
CCTCCTACAGTTAAGAAAAG+TGG 0.511269 7:+66688861 None:intergenic
TGCAGAAGGGGTATGGGCAG+TGG 0.512805 7:-66688929 MsG0780039611.01.T01:CDS
ACTTCAAGTACTTTCTCCAT+TGG 0.513136 7:-66688995 MsG0780039611.01.T01:CDS
ACGACTGCAGGAAATGTTGA+TGG 0.513579 7:-66684371 MsG0780039611.01.T01:three_prime_UTR
CGAGAAGCTTAGAAGTGAAT+GGG 0.514863 7:-66686194 MsG0780039611.01.T01:three_prime_UTR
GGATCTTTACACAAAGGAAA+GGG 0.515728 7:-66684088 MsG0780039611.01.T01:three_prime_UTR
GGTGGAGCATGCAGAATATG+AGG 0.519622 7:-66686744 MsG0780039611.01.T01:CDS
TGCAGGAAATGTTGATGGTA+GGG 0.519732 7:-66684366 MsG0780039611.01.T01:three_prime_UTR
CTCTTGCATTGGACCACCGT+TGG 0.519987 7:+66686162 None:intergenic
TGCATTGCAGGAATATCTAC+AGG 0.520921 7:+66684809 None:intergenic
AATCCAATGTGTTCAAATTG+TGG 0.530145 7:-66690280 MsG0780039611.01.T01:CDS
CCTCCACAATTTGAACACAT+TGG 0.531110 7:+66690277 None:intergenic
TGGATGATCCGGGTGAGCCA+CGG 0.531595 7:-66686290 MsG0780039611.01.T01:three_prime_UTR
ACCACCATTATCACGACTGC+AGG 0.532796 7:-66684383 MsG0780039611.01.T01:three_prime_UTR
ACTAGATATCACTTCAGTTG+TGG 0.533585 7:+66689203 None:intergenic
CTGCAGGAAATGTTGATGGT+AGG 0.533636 7:-66684367 MsG0780039611.01.T01:three_prime_UTR
GAGGCTTCCTTCTGGTTGTG+TGG 0.534040 7:-66688842 MsG0780039611.01.T01:CDS
TTCTAAGCTTCTCGTTGCGA+AGG 0.534552 7:+66686203 None:intergenic
CACCGTCGATGCACAAACTC+CGG 0.536497 7:+66686379 None:intergenic
ATTGAAAGTGGCGCGTGAGA+AGG 0.538156 7:-66684192 MsG0780039611.01.T01:three_prime_UTR
CTCCTACAGTTAAGAAAAGT+GGG 0.539174 7:+66688862 None:intergenic
TGGTGGTTCGGGTATTGACT+CGG 0.539964 7:-66684065 MsG0780039611.01.T01:three_prime_UTR
TGGATCTTTACACAAAGGAA+AGG 0.540501 7:-66684089 MsG0780039611.01.T01:three_prime_UTR
AGGAAGAGTGTGGATGATCC+GGG 0.542002 7:-66686300 MsG0780039611.01.T01:three_prime_UTR
TCTGAGGCTTCTAGAGAAAG+TGG 0.543217 7:-66689778 MsG0780039611.01.T01:CDS
AAATAGAAGAACACAAATGA+AGG 0.546022 7:-66690633 MsG0780039611.01.T01:intron
GCAGCATGCAGAAGGGGTAT+GGG 0.548640 7:-66688935 MsG0780039611.01.T01:CDS
TGCCGGAGTTTGTGCATCGA+CGG 0.549484 7:-66686381 MsG0780039611.01.T01:three_prime_UTR
TCCATTGGTTCCTGTTCGTG+AGG 0.554096 7:-66688980 MsG0780039611.01.T01:CDS
AAATGGAACAAATTGGATGC+AGG 0.554200 7:-66686353 MsG0780039611.01.T01:three_prime_UTR
GGTAATGACAAGGAAGAGTG+TGG 0.554273 7:-66686310 MsG0780039611.01.T01:three_prime_UTR
AGAAACAAACACAGACGCAT+CGG 0.554548 7:-66684850 MsG0780039611.01.T01:three_prime_UTR
ATGTGAGCCATCTCTTGCAT+TGG 0.555705 7:+66686151 None:intergenic
CAAATTGGATGCAGGAATGT+GGG 0.558318 7:-66686345 MsG0780039611.01.T01:three_prime_UTR
TGCATACACTAGCTCGTAGG+AGG 0.558654 7:+66686095 None:intergenic
ACATTCACATTGGCGTTGGA+GGG 0.559350 7:+66686647 None:intergenic
TCAACACTTCTAATCCAAAG+AGG 0.561610 7:+66689886 None:intergenic
GGGTCGCAGCGGAGAGCGAG+TGG 0.562161 7:-66684683 MsG0780039611.01.T01:three_prime_UTR
TACAAAATACAAACTCAAAG+TGG 0.564412 7:+66684487 None:intergenic
AACATATGATGCAGGTGACA+TGG 0.564953 7:-66686766 MsG0780039611.01.T01:intron
TTAGCAAGGGTCTATAGAGC+TGG 0.566123 7:+66686708 None:intergenic
TGTTGTTATCATAAACAGCT+TGG 0.566826 7:-66689755 MsG0780039611.01.T01:CDS
AACCATGCCTAAGCTTAGCA+AGG 0.568460 7:+66686694 None:intergenic
ACCCTTGCTAAGCTTAGGCA+TGG 0.569171 7:-66686696 MsG0780039611.01.T01:CDS
ACCTCACGAACAGGAACCAA+TGG 0.570995 7:+66688979 None:intergenic
ACCATCAGAGAAGCTTCAGC+TGG 0.571588 7:-66688889 MsG0780039611.01.T01:CDS
AGCAAATATCTGCAGTCACA+CGG 0.572524 7:-66684433 MsG0780039611.01.T01:three_prime_UTR
GTAACAAATACTAATAGTAA+TGG 0.574242 7:-66689997 MsG0780039611.01.T01:CDS
CTGTTGTATAACAGAATCGA+TGG 0.574417 7:-66689260 MsG0780039611.01.T01:intron
GAGCTTCTTGCAATCACACA+AGG 0.574571 7:+66689225 None:intergenic
CGGTGGTCCAATGCAAGAGA+TGG 0.575553 7:-66686158 MsG0780039611.01.T01:three_prime_UTR
GGTTTCGCCGTGTTACCAGA+TGG 0.577544 7:-66684737 MsG0780039611.01.T01:three_prime_UTR
AATGGATGAGTTAGTGAAGA+TGG 0.583650 7:-66689923 MsG0780039611.01.T01:CDS
GGAGTGGTAATCACGATGAC+GGG 0.588681 7:-66684703 MsG0780039611.01.T01:three_prime_UTR
TTACACAAAGGAAAGGGTGG+TGG 0.588780 7:-66684082 MsG0780039611.01.T01:three_prime_UTR
TAGCAATAAGTGCAGGAGGA+AGG 0.588813 7:-66686448 MsG0780039611.01.T01:three_prime_UTR
GAGTGATGATGACATTAAGA+TGG 0.589154 7:+66686620 None:intergenic
TACCAGATGGACATAGCGAC+GGG 0.591264 7:-66684724 MsG0780039611.01.T01:three_prime_UTR
ACAAATTGGATGCAGGAATG+TGG 0.592302 7:-66686346 MsG0780039611.01.T01:three_prime_UTR
ACAACTGAAGTGATATCTAG+TGG 0.593868 7:-66689201 MsG0780039611.01.T01:CDS
CTATGTGTAGCAATAAGTGC+AGG 0.597052 7:-66686455 MsG0780039611.01.T01:intron
TTGCAAGCAGCATGCAGAAG+GGG 0.600217 7:-66688941 MsG0780039611.01.T01:CDS
ACCAGCTGAAGCTTCTCTGA+TGG 0.600752 7:+66688888 None:intergenic
AATCTAGTTTGTTGAATGTG+AGG 0.602795 7:-66683962 MsG0780039611.01.T01:three_prime_UTR
GTGGTTCAAGATATGCCAAA+TGG 0.603358 7:-66688823 MsG0780039611.01.T01:CDS
TTAATCATGAGGAATATACA+AGG 0.603991 7:-66689846 MsG0780039611.01.T01:CDS
GATGGACATAGCGACGGGAG+TGG 0.607388 7:-66684719 MsG0780039611.01.T01:three_prime_UTR
TGGATGCAGGAATGTGGGCG+AGG 0.607749 7:-66686340 MsG0780039611.01.T01:three_prime_UTR
GTTCCTCTTGTAATTGAAGG+TGG 0.608032 7:+66690027 None:intergenic
TCACCACCTTCAATTACAAG+AGG 0.610841 7:-66690030 MsG0780039611.01.T01:CDS
GGAGGGAGACACAGTTGCCA+TGG 0.612613 7:+66686113 None:intergenic
ACCATGCCTAAGCTTAGCAA+GGG 0.614533 7:+66686695 None:intergenic
GTCACGAGAATTCACTACTT+AGG 0.625972 7:-66690357 MsG0780039611.01.T01:CDS
GGGAGTGGTAATCACGATGA+CGG 0.631663 7:-66684704 MsG0780039611.01.T01:three_prime_UTR
TGCCGGCAAGTGTACAAACT+CGG 0.632620 7:+66690176 None:intergenic
TTTGCAAGCAGCATGCAGAA+GGG 0.633056 7:-66688942 MsG0780039611.01.T01:CDS
GGGTTTGGATCTTTACACAA+AGG 0.634936 7:-66684094 MsG0780039611.01.T01:three_prime_UTR
AAAGCTCGCGGTGGAATCAG+TGG 0.637664 7:-66684609 MsG0780039611.01.T01:three_prime_UTR
TCCACCGCGAGCTTTGCCGT+CGG 0.643177 7:+66684617 None:intergenic
TCTTGAACCACACAACCAGA+AGG 0.644378 7:+66688835 None:intergenic
GCAATGCATGTAGTAATGAA+CGG 0.644467 7:-66684794 MsG0780039611.01.T01:three_prime_UTR
CCAATGTGTTCAAATTGTGG+AGG 0.649005 7:-66690277 MsG0780039611.01.T01:CDS
TCTACCGACGGCAAAGCTCG+CGG 0.650364 7:-66684621 MsG0780039611.01.T01:three_prime_UTR
ATATGCATACACTAGCTCGT+AGG 0.653193 7:+66686092 None:intergenic
TATAGACCCTTGCTAAGCTT+AGG 0.654709 7:-66686701 MsG0780039611.01.T01:CDS
ACATATGATGCAGGTGACAT+GGG 0.655326 7:-66686765 MsG0780039611.01.T01:intron
GCATACACTAGCTCGTAGGA+GGG 0.655354 7:+66686096 None:intergenic
GAGATGGCTCACATTGCCAA+AGG 0.656074 7:-66686142 MsG0780039611.01.T01:three_prime_UTR
ATCACGATGACGGGTCGCAG+CGG 0.657275 7:-66684694 MsG0780039611.01.T01:three_prime_UTR
GGTAACACGGCGAAACCCGA+CGG 0.657528 7:+66684743 None:intergenic
AGATGGCTAGACATTCACAT+TGG 0.658957 7:+66686637 None:intergenic
TTACCAGATGGACATAGCGA+CGG 0.660884 7:-66684725 MsG0780039611.01.T01:three_prime_UTR
TGTGTAGCAATAAGTGCAGG+AGG 0.662801 7:-66686452 MsG0780039611.01.T01:intron
TATACCTGAGTGTTCTCTAG+CGG 0.665145 7:+66686596 None:intergenic
TGTCAATAAGAGAAGCAATG+AGG 0.665809 7:-66690303 MsG0780039611.01.T01:CDS
ACCGACGGCAAAGCTCGCGG+TGG 0.666727 7:-66684618 MsG0780039611.01.T01:three_prime_UTR
GCTATGTCCATCTGGTAACA+CGG 0.669438 7:+66684730 None:intergenic
GGTGGTGAGTATCCAAGACT+TGG 0.670971 7:-66684119 MsG0780039611.01.T01:three_prime_UTR
TCTTTACACAAAGGAAAGGG+TGG 0.672114 7:-66684085 MsG0780039611.01.T01:three_prime_UTR
TACCTGAGTGTTCTCTAGCG+GGG 0.673914 7:+66686598 None:intergenic
GAATGGGACATACTCTCCAA+CGG 0.674539 7:-66686178 MsG0780039611.01.T01:three_prime_UTR
AAACAAACACAGACGCATCG+GGG 0.676878 7:-66684848 MsG0780039611.01.T01:three_prime_UTR
TGGGACATACTCTCCAACGG+TGG 0.676947 7:-66686175 MsG0780039611.01.T01:three_prime_UTR
GATGATCCGGGTGAGCCACG+GGG 0.678504 7:-66686288 MsG0780039611.01.T01:three_prime_UTR
ACTTGTGAACAGTCTACCGA+CGG 0.682561 7:-66684633 MsG0780039611.01.T01:three_prime_UTR
TGGCGCGTGAGAAGGACATG+AGG 0.685802 7:-66684184 MsG0780039611.01.T01:three_prime_UTR
TATGATGCAGGTGACATGGG+TGG 0.686232 7:-66686762 MsG0780039611.01.T01:intron
TCCTGCAGTCGTGATAATGG+TGG 0.690550 7:+66684382 None:intergenic
TGCACTAAGCACAATCCCCG+TGG 0.694225 7:+66686273 None:intergenic
ATTGCCAAAGGACATGACCA+TGG 0.701545 7:-66686130 MsG0780039611.01.T01:three_prime_UTR
AGCTTCTTGCAATCACACAA+GGG 0.721070 7:+66689226 None:intergenic
AGGACGTTAGGGTAATGACA+AGG 0.727528 7:-66686320 MsG0780039611.01.T01:three_prime_UTR
TGAAGCGGGTAGCCAAACTG+AGG 0.731803 7:+66686246 None:intergenic
CTCCCCGCTAGAGAACACTC+AGG 0.744703 7:-66686600 MsG0780039611.01.T01:intron
ATGCATGTAGTAATGAACGG+CGG 0.775511 7:-66684791 MsG0780039611.01.T01:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAACAAATTAATTATTTAA+AGG + Chr7:66686861-66686880 None:intergenic 10.0%
!! ATAAATTTAGAAACAAAAAA+TGG - Chr7:66684114-66684133 MsG0780039611.01.T01:three_prime_UTR 10.0%
!! CAACAAATTAATTATTTAAA+GGG + Chr7:66686860-66686879 None:intergenic 10.0%
!! CATTATAAAATTAATAACAT+GGG + Chr7:66686481-66686500 None:intergenic 10.0%
!! GTAACTAAAAATATTATTAA+TGG + Chr7:66685507-66685526 None:intergenic 10.0%
!! TAATAAAAAACACTTAATTA+TGG + Chr7:66688645-66688664 None:intergenic 10.0%
!!! AATTTTTTATATACATCTAT+TGG + Chr7:66685879-66685898 None:intergenic 10.0%
!!! ATTATTTATTTATTTCAAGT+TGG - Chr7:66686268-66686287 MsG0780039611.01.T01:three_prime_UTR 10.0%
!!! ATTTATTTTTTCATTTTACT+TGG - Chr7:66684981-66685000 MsG0780039611.01.T01:intron 10.0%
!!! CATGTTATTAATTTTATAAT+GGG - Chr7:66686480-66686499 MsG0780039611.01.T01:intron 10.0%
!! AAATTGAAATTAGAAATGAA+TGG - Chr7:66689093-66689112 MsG0780039611.01.T01:intron 15.0%
!! AATTTGAGCTATTTATTTAT+GGG - Chr7:66688891-66688910 MsG0780039611.01.T01:CDS 15.0%
!! CCATTATAAAATTAATAACA+TGG + Chr7:66686482-66686501 None:intergenic 15.0%
!! GTTATATAATATATTCAATG+TGG - Chr7:66687026-66687045 MsG0780039611.01.T01:intron 15.0%
!! TAACTCTATAAAAACATAAA+AGG + Chr7:66686577-66686596 None:intergenic 15.0%
!!! AAAAGAAATTTTTAATCATG+AGG - Chr7:66684748-66684767 MsG0780039611.01.T01:three_prime_UTR 15.0%
!!! AATTTTTGTAATCTATGTAA+AGG - Chr7:66686192-66686211 MsG0780039611.01.T01:three_prime_UTR 15.0%
!!! CAATTTAGAAAGTTTTTTTT+TGG + Chr7:66689079-66689098 None:intergenic 15.0%
!!! CCATGTTATTAATTTTATAA+TGG - Chr7:66686479-66686498 MsG0780039611.01.T01:intron 15.0%
!!! TAATCAAGTGTTTTAAAAAA+TGG - Chr7:66688668-66688687 MsG0780039611.01.T01:intron 15.0%
!!! TTGCAAATATAATTTTTTAG+TGG - Chr7:66685267-66685286 MsG0780039611.01.T01:intron 15.0%
!!! TTTAAAGTGATGAAAATAAA+AGG + Chr7:66685529-66685548 None:intergenic 15.0%
!!! TTTTCTAAACATCAAAATTT+AGG + Chr7:66689393-66689412 None:intergenic 15.0%
!! AACAAAAAATGGTAAAAAAC+CGG - Chr7:66684125-66684144 MsG0780039611.01.T01:three_prime_UTR 20.0%
!! AAGTAAAAACAATAAACCAA+TGG + Chr7:66690691-66690710 None:intergenic 20.0%
!! AATTGAATCATATTTCACTA+TGG + Chr7:66688875-66688894 None:intergenic 20.0%
!! ACTTAATTATGGTATTAGTT+TGG + Chr7:66688634-66688653 None:intergenic 20.0%
!! AGAAAAAGAAAACAAAAATG+TGG - Chr7:66689407-66689426 MsG0780039611.01.T01:intron 20.0%
!! ATTGAGAGACTAATTATAAA+AGG + Chr7:66686675-66686694 None:intergenic 20.0%
!! CAAATTCCAAAAAGTAATAA+AGG - Chr7:66686138-66686157 MsG0780039611.01.T01:three_prime_UTR 20.0%
!! CAAGTACATACATAAAATAA+TGG + Chr7:66687212-66687231 None:intergenic 20.0%
!! CAATTTGAGCTATTTATTTA+TGG - Chr7:66688890-66688909 MsG0780039611.01.T01:CDS 20.0%
!! CATAGATTACAAAAATTATC+AGG + Chr7:66686189-66686208 None:intergenic 20.0%
!! CATGAGATAATTGTAAATAT+TGG + Chr7:66685097-66685116 None:intergenic 20.0%
!! GTAACAAATACTAATAGTAA+TGG - Chr7:66684608-66684627 MsG0780039611.01.T01:three_prime_UTR 20.0%
!! TAAGAAAATGATATTGAAGA+TGG + Chr7:66688543-66688562 None:intergenic 20.0%
!! TAATAACTCGATTATTTAGA+AGG - Chr7:66687546-66687565 MsG0780039611.01.T01:intron 20.0%
!! TAATGGTATAACTAATAACA+TGG - Chr7:66687804-66687823 MsG0780039611.01.T01:intron 20.0%
!! TAGAGATGAAAAATACAAAA+TGG + Chr7:66686035-66686054 None:intergenic 20.0%
!! TGAATCCATTAATTTAATCA+TGG - Chr7:66686783-66686802 MsG0780039611.01.T01:intron 20.0%
!! TGCCAAATTATAGTATATAT+GGG - Chr7:66687443-66687462 MsG0780039611.01.T01:intron 20.0%
!! TTAGACTATGAAATTTGTAA+CGG - Chr7:66687592-66687611 MsG0780039611.01.T01:intron 20.0%
!! TTGAGAGACTAATTATAAAA+GGG + Chr7:66686674-66686693 None:intergenic 20.0%
!! TTGCCAAATTATAGTATATA+TGG - Chr7:66687442-66687461 MsG0780039611.01.T01:intron 20.0%
!!! AAATTTAGGTTAAAAGAATG+AGG + Chr7:66689379-66689398 None:intergenic 20.0%
!!! AACTTTTTTTTTCTTCTTCT+AGG + Chr7:66684083-66684102 None:intergenic 20.0%
!!! ACTTTTGGAAAGTTTTTTTT+TGG + Chr7:66684001-66684020 None:intergenic 20.0%
!!! AGTTTAGAAATTGGTTTTAA+TGG - Chr7:66684491-66684510 MsG0780039611.01.T01:three_prime_UTR 20.0%
!!! ATTGAGCAATATTTTAAAGT+TGG - Chr7:66686320-66686339 MsG0780039611.01.T01:three_prime_UTR 20.0%
!!! CAATGTAAATATACTACTTT+TGG + Chr7:66688956-66688975 None:intergenic 20.0%
!!! CTTTATTACTTTTTGGAATT+TGG + Chr7:66686140-66686159 None:intergenic 20.0%
!!! GAATTTATTTTTTTTGCCAT+TGG - Chr7:66690672-66690691 MsG0780039611.01.T01:CDS 20.0%
!!! GCATCATGTATTTTATAAAA+GGG + Chr7:66685852-66685871 None:intergenic 20.0%
!!! TGCATCATGTATTTTATAAA+AGG + Chr7:66685853-66685872 None:intergenic 20.0%
!!! TTGAGCAATATTTTAAAGTT+GGG - Chr7:66686321-66686340 MsG0780039611.01.T01:three_prime_UTR 20.0%
!!! TTTGATTTTCAAAGTTTTGT+TGG + Chr7:66689653-66689672 None:intergenic 20.0%
! AAATAGAAGAACACAAATGA+AGG - Chr7:66683972-66683991 MsG0780039611.01.T01:three_prime_UTR 25.0%
! AATAGCTAACAATTATGTTG+TGG - Chr7:66687693-66687712 MsG0780039611.01.T01:intron 25.0%
! AATTACAAGAGGAACAAATA+TGG - Chr7:66684586-66684605 MsG0780039611.01.T01:three_prime_UTR 25.0%
! AGACAATTTGTAACAGAAAT+AGG - Chr7:66689267-66689286 MsG0780039611.01.T01:intron 25.0%
! AGCCCATATATACTATAATT+TGG + Chr7:66687448-66687467 None:intergenic 25.0%
! AGTCTATTATCTTGATTCAA+AGG + Chr7:66687054-66687073 None:intergenic 25.0%
! ATAAACATTGCATTGGAAAA+TGG + Chr7:66689026-66689045 None:intergenic 25.0%
! ATCATGTATAAACATTGCAT+TGG + Chr7:66689033-66689052 None:intergenic 25.0%
! ATTATTAGTACTCCTTGTAT+TGG - Chr7:66684782-66684801 MsG0780039611.01.T01:three_prime_UTR 25.0%
! CAAACATAACTACTAATTTC+AGG - Chr7:66687517-66687536 MsG0780039611.01.T01:intron 25.0%
! CGAAAAAAAAAATTAGAGAC+CGG + Chr7:66684147-66684166 None:intergenic 25.0%
! GACAATTTGTAACAGAAATA+GGG - Chr7:66689268-66689287 MsG0780039611.01.T01:intron 25.0%
! GACTTCCATGATTAAATTAA+TGG + Chr7:66686791-66686810 None:intergenic 25.0%
! GATGAAAAGTAAAATTGAGA+AGG - Chr7:66689212-66689231 MsG0780039611.01.T01:CDS 25.0%
! GTCTATTATCTTGATTCAAA+GGG + Chr7:66687053-66687072 None:intergenic 25.0%
! TACAAAATACAAACTCAAAG+TGG + Chr7:66690121-66690140 None:intergenic 25.0%
! TATAAAAGGGTAATGTTAAC+CGG + Chr7:66686661-66686680 None:intergenic 25.0%
! TTAATCATGAGGAATATACA+AGG - Chr7:66684759-66684778 MsG0780039611.01.T01:three_prime_UTR 25.0%
! TTATCACGTTATAGTTATTG+AGG + Chr7:66690345-66690364 None:intergenic 25.0%
! TTGAACCCTATAAAACATAT+AGG - Chr7:66687000-66687019 MsG0780039611.01.T01:intron 25.0%
! TTGAATGAAGTAGTTGAAAA+AGG + Chr7:66684907-66684926 None:intergenic 25.0%
! TTGATTATATCAGACTCAAT+TGG - Chr7:66684222-66684241 MsG0780039611.01.T01:three_prime_UTR 25.0%
! TTGATTATGATCATGATTCA+TGG + Chr7:66687328-66687347 None:intergenic 25.0%
!! AACTGACCTATATGTTTTAT+AGG + Chr7:66687009-66687028 None:intergenic 25.0%
!! ACTGACCTATATGTTTTATA+GGG + Chr7:66687008-66687027 None:intergenic 25.0%
!! ATGTTTTCTGCTAGTATAAT+GGG + Chr7:66690570-66690589 None:intergenic 25.0%
!! CATAGTCTAAGCTTTAATAA+TGG + Chr7:66687582-66687601 None:intergenic 25.0%
!! GGAATAGTATCTTTTTCTTT+TGG - Chr7:66684035-66684054 MsG0780039611.01.T01:three_prime_UTR 25.0%
!! TATTTCACTATGGTAATGTT+CGG + Chr7:66688865-66688884 None:intergenic 25.0%
!! TCATTTGTGTTCTTCTATTT+TGG + Chr7:66683972-66683991 None:intergenic 25.0%
!! TGATTTTTAAACCAATGATC+CGG - Chr7:66686630-66686649 MsG0780039611.01.T01:exon 25.0%
!! TGGAGTTCAATATTTTCATA+CGG - Chr7:66684055-66684074 MsG0780039611.01.T01:three_prime_UTR 25.0%
!!! AGTTTCAGATTTTGACTTTT+TGG + Chr7:66689318-66689337 None:intergenic 25.0%
!!! ATTACTTTTTGGAATTTGGA+AGG + Chr7:66686136-66686155 None:intergenic 25.0%
!!! GTCTTTTTCGTTAAGTTTTA+GGG + Chr7:66689465-66689484 None:intergenic 25.0%
!!! GTGAATCCTTTATTACTTTT+TGG + Chr7:66686147-66686166 None:intergenic 25.0%
!!! GTTTAATTTGAACTATGTCA+TGG - Chr7:66685116-66685135 MsG0780039611.01.T01:intron 25.0%
!!! TAACATTGGTTTACATGTTA+GGG - Chr7:66685993-66686012 MsG0780039611.01.T01:intron 25.0%
!!! TAATGGTTTTGATAGATCAA+TGG - Chr7:66684625-66684644 MsG0780039611.01.T01:three_prime_UTR 25.0%
!!! TCTTTTTGCTATAAGTGTTT+GGG - Chr7:66687084-66687103 MsG0780039611.01.T01:intron 25.0%
!!! TGAGCAATATTTTAAAGTTG+GGG - Chr7:66686322-66686341 MsG0780039611.01.T01:three_prime_UTR 25.0%
!!! TGTATTGGTTTAAAACCAAA+TGG - Chr7:66684797-66684816 MsG0780039611.01.T01:three_prime_UTR 25.0%
!!! TGTCTTTTTCGTTAAGTTTT+AGG + Chr7:66689466-66689485 None:intergenic 25.0%
!!! TGTTTTTTTTTTCTTGTTGC+AGG - Chr7:66689695-66689714 MsG0780039611.01.T01:intron 25.0%
!!! TTTGGTTTTAAACCAATACA+AGG + Chr7:66684797-66684816 None:intergenic 25.0%
AAAACAAAAATGTGGTACCA+AGG - Chr7:66689415-66689434 MsG0780039611.01.T01:intron 30.0%
AAAGACTTGAACTTAGCAAA+AGG - Chr7:66683911-66683930 MsG0780039611.01.T01:three_prime_UTR 30.0%
AAAGTAAAATTGAGAAGGAC+AGG - Chr7:66689217-66689236 MsG0780039611.01.T01:CDS 30.0%
AAGTAAAATTGAGAAGGACA+GGG - Chr7:66689218-66689237 MsG0780039611.01.T01:CDS 30.0%
AAGTTGGGATTTCATGAATA+TGG - Chr7:66687764-66687783 MsG0780039611.01.T01:intron 30.0%
AATCCAATGTGTTCAAATTG+TGG - Chr7:66684325-66684344 MsG0780039611.01.T01:three_prime_UTR 30.0%
AATTCAGTTTCGTAGTTATG+AGG - Chr7:66690262-66690281 MsG0780039611.01.T01:CDS 30.0%
ACAATAAACTTCGCAAAGTT+GGG - Chr7:66687749-66687768 MsG0780039611.01.T01:intron 30.0%
AGCTACCAAAATTTAAGTGA+TGG + Chr7:66686815-66686834 None:intergenic 30.0%
ATTACCTTAGAGTAACCATT+TGG + Chr7:66685800-66685819 None:intergenic 30.0%
CAAAAGTCTTTGTATTCACA+TGG - Chr7:66684014-66684033 MsG0780039611.01.T01:three_prime_UTR 30.0%
CAAGTATGAACAGAAAATCT+TGG + Chr7:66687294-66687313 None:intergenic 30.0%
CACAAAAGTTGTTTGTCATT+CGG + Chr7:66688206-66688225 None:intergenic 30.0%
GCTACGTGCAATATAAAATT+AGG + Chr7:66687151-66687170 None:intergenic 30.0%
GTGATATCTAGTGGAATAAA+TGG - Chr7:66685413-66685432 MsG0780039611.01.T01:intron 30.0%
GTGTACAAGTAATTGAAACA+TGG - Chr7:66686290-66686309 MsG0780039611.01.T01:three_prime_UTR 30.0%
TAATTTGAACTATGTCATGG+AGG - Chr7:66685119-66685138 MsG0780039611.01.T01:intron 30.0%
TACAATAAACTTCGCAAAGT+TGG - Chr7:66687748-66687767 MsG0780039611.01.T01:intron 30.0%
TACTAGATAAAGTCATCATC+CGG + Chr7:66687186-66687205 None:intergenic 30.0%
TCAATTTGAGAGATTGAAAG+TGG - Chr7:66690401-66690420 MsG0780039611.01.T01:intron 30.0%
TGTTGTTATCATAAACAGCT+TGG - Chr7:66684850-66684869 MsG0780039611.01.T01:three_prime_UTR 30.0%
TTTACATGAACATATGATGC+AGG - Chr7:66687831-66687850 MsG0780039611.01.T01:intron 30.0%
TTTGTTCCTCTTGTAATTGA+AGG + Chr7:66684584-66684603 None:intergenic 30.0%
! AAACAAGACAAGTCAAGTTT+TGG - Chr7:66683944-66683963 MsG0780039611.01.T01:three_prime_UTR 30.0%
! AGGAAATCAAAGACTTTTTG+TGG + Chr7:66688385-66688404 None:intergenic 30.0%
! AGTCTCCATCACTTAAATTT+TGG - Chr7:66686807-66686826 MsG0780039611.01.T01:intron 30.0%
! CATGTGAATACAAAGACTTT+TGG + Chr7:66684016-66684035 None:intergenic 30.0%
! CATGTTTTCTGCTAGTATAA+TGG + Chr7:66690571-66690590 None:intergenic 30.0%
! GATTTTTAAACCAATGATCC+GGG - Chr7:66686631-66686650 MsG0780039611.01.T01:exon 30.0%
! GCAAAATTAGCTTCTAACAT+TGG - Chr7:66685979-66685998 MsG0780039611.01.T01:intron 30.0%
! TATGTTTCTTGAACTTGCTT+TGG - Chr7:66684655-66684674 MsG0780039611.01.T01:three_prime_UTR 30.0%
! TTTTGTTAAATGTGTGTGTC+TGG + Chr7:66688095-66688114 None:intergenic 30.0%
!! AATCTAGTTTGTTGAATGTG+AGG - Chr7:66690643-66690662 MsG0780039611.01.T01:CDS 30.0%
!! CTAACATTGGTTTACATGTT+AGG - Chr7:66685992-66686011 MsG0780039611.01.T01:intron 30.0%
!! GTCTTTTTGCTATAAGTGTT+TGG - Chr7:66687083-66687102 MsG0780039611.01.T01:intron 30.0%
!! TATGAAATTTGTAACGGACT+TGG - Chr7:66687598-66687617 MsG0780039611.01.T01:intron 30.0%
!!! AATATTTTAAAGTTGGGGAG+GGG - Chr7:66686327-66686346 MsG0780039611.01.T01:three_prime_UTR 30.0%
!!! ATTTGCTATATTTTGCAGTG+TGG + Chr7:66687119-66687138 None:intergenic 30.0%
!!! CAATATTTTAAAGTTGGGGA+GGG - Chr7:66686326-66686345 MsG0780039611.01.T01:three_prime_UTR 30.0%
!!! TCAAGTCTTTGTTTTTCATC+AGG + Chr7:66683901-66683920 None:intergenic 30.0%
!!! TTTTCGTTAAGTTTTAGGGT+TGG + Chr7:66689461-66689480 None:intergenic 30.0%
!!! TTTTTGGAATTTGGAAGGTA+AGG + Chr7:66686131-66686150 None:intergenic 30.0%
AAACAGTCGAGATAGTAGTA+CGG + Chr7:66686234-66686253 None:intergenic 35.0%
AAATGGAACAAATTGGATGC+AGG - Chr7:66688252-66688271 MsG0780039611.01.T01:intron 35.0%
AACACAAAGCTAAGGAATCA+TGG - Chr7:66686353-66686372 MsG0780039611.01.T01:three_prime_UTR 35.0%
AATGGATGAGTTAGTGAAGA+TGG - Chr7:66684682-66684701 MsG0780039611.01.T01:three_prime_UTR 35.0%
ACAACTGAAGTGATATCTAG+TGG - Chr7:66685404-66685423 MsG0780039611.01.T01:intron 35.0%
ACTAGATAAAGTCATCATCC+GGG + Chr7:66687185-66687204 None:intergenic 35.0%
ACTAGATATCACTTCAGTTG+TGG + Chr7:66685405-66685424 None:intergenic 35.0%
ACTTCAAGTACTTTCTCCAT+TGG - Chr7:66685610-66685629 MsG0780039611.01.T01:intron 35.0%
AGGACAGGGTTGAAAATATT+TGG - Chr7:66689232-66689251 MsG0780039611.01.T01:CDS 35.0%
AGTGATGAACACATCAATGT+AGG - Chr7:66686749-66686768 MsG0780039611.01.T01:CDS 35.0%
ATATGGTAGGAAAATGAGCA+TGG - Chr7:66687781-66687800 MsG0780039611.01.T01:intron 35.0%
ATCATTCACACATGTTGAAC+AGG + Chr7:66687369-66687388 None:intergenic 35.0%
ATGAGCTTTCTAAGTTGCTT+GGG + Chr7:66686391-66686410 None:intergenic 35.0%
ATGCCAAAATCTTGACCTAA+AGG + Chr7:66684545-66684564 None:intergenic 35.0%
CATCAATGTAGGTGAAATCT+AGG - Chr7:66686760-66686779 MsG0780039611.01.T01:intron 35.0%
CATTGGAAAATGGTGAAAAG+TGG + Chr7:66689016-66689035 None:intergenic 35.0%
CCAAACTCGAGTTTAGAAAT+TGG - Chr7:66684482-66684501 MsG0780039611.01.T01:three_prime_UTR 35.0%
CCAATTTCTAAACTCGAGTT+TGG + Chr7:66684485-66684504 None:intergenic 35.0%
CGATGTGTTTCACAAGATTA+CGG + Chr7:66687491-66687510 None:intergenic 35.0%
CTAAGCCAAGAATGATTGAA+AGG + Chr7:66684953-66684972 None:intergenic 35.0%
CTCCTACAGTTAAGAAAAGT+GGG + Chr7:66685746-66685765 None:intergenic 35.0%
CTGTTCATACTTGTACATCA+TGG - Chr7:66687301-66687320 MsG0780039611.01.T01:intron 35.0%
CTGTTGTATAACAGAATCGA+TGG - Chr7:66685345-66685364 MsG0780039611.01.T01:intron 35.0%
CTTTCAATCATTCTTGGCTT+AGG - Chr7:66684951-66684970 MsG0780039611.01.T01:intron 35.0%
GATTATTTAGAAGGATGCGT+CGG - Chr7:66687555-66687574 MsG0780039611.01.T01:intron 35.0%
GCAATGCATGTAGTAATGAA+CGG - Chr7:66689811-66689830 MsG0780039611.01.T01:CDS 35.0%
GGAATAAATGGAACCAGAAA+TGG - Chr7:66685425-66685444 MsG0780039611.01.T01:intron 35.0%
GGATCTTTACACAAAGGAAA+GGG - Chr7:66690517-66690536 MsG0780039611.01.T01:intron 35.0%
GGCTCTTGTTGAAACTTTAA+TGG - Chr7:66684871-66684890 MsG0780039611.01.T01:three_prime_UTR 35.0%
GGTAATGTTCGGCAATAATA+TGG + Chr7:66688854-66688873 None:intergenic 35.0%
GTAGTCAATAAGTCAAACCT+TGG + Chr7:66689435-66689454 None:intergenic 35.0%
TAGGAAAATGAGCATGGTAA+TGG - Chr7:66687787-66687806 MsG0780039611.01.T01:intron 35.0%
TATGCCAAATGGTTACTCTA+AGG - Chr7:66685793-66685812 MsG0780039611.01.T01:intron 35.0%
TATTTGTCCACAATAACCCA+CGG - Chr7:66688117-66688136 MsG0780039611.01.T01:intron 35.0%
TCAACACTTCTAATCCAAAG+AGG + Chr7:66684722-66684741 None:intergenic 35.0%
TGGATCTTTACACAAAGGAA+AGG - Chr7:66690516-66690535 MsG0780039611.01.T01:intron 35.0%
TGGGATTTCATGAATATGGT+AGG - Chr7:66687768-66687787 MsG0780039611.01.T01:intron 35.0%
TGTCAATAAGAGAAGCAATG+AGG - Chr7:66684302-66684321 MsG0780039611.01.T01:three_prime_UTR 35.0%
TTCATTACTACATGCATTGC+AGG + Chr7:66689811-66689830 None:intergenic 35.0%
! AAAGACTTTTTGTGGTGAAG+CGG + Chr7:66688377-66688396 None:intergenic 35.0%
! ATGACAAACAACTTTTGTGC+CGG - Chr7:66688207-66688226 MsG0780039611.01.T01:intron 35.0%
! ATGCCTTTAGGTCAAGATTT+TGG - Chr7:66684539-66684558 MsG0780039611.01.T01:three_prime_UTR 35.0%
! CTTAGCCTTTCAATCATTCT+TGG - Chr7:66684945-66684964 MsG0780039611.01.T01:intron 35.0%
! GAGTGATGATGACATTAAGA+TGG + Chr7:66687988-66688007 None:intergenic 35.0%
! GTTTTATAGGGTTCAAAACC+AGG + Chr7:66686996-66687015 None:intergenic 35.0%
! TTTTGTGATAGACACAAGAG+AGG + Chr7:66686721-66686740 None:intergenic 35.0%
!! ACTTAGCAAAAGGCTTTGTT+TGG - Chr7:66683921-66683940 MsG0780039611.01.T01:three_prime_UTR 35.0%
!! GTTTTGATAGATCAATGGAG+AGG - Chr7:66684630-66684649 MsG0780039611.01.T01:three_prime_UTR 35.0%
!! TGGATTAGAAGTGTTGAAAG+TGG - Chr7:66684725-66684744 MsG0780039611.01.T01:three_prime_UTR 35.0%
!! TTGTTTTGTCGTGTAGTCAT+TGG - Chr7:66689190-66689209 MsG0780039611.01.T01:CDS 35.0%
!! TTTAGGTCAAGATTTTGGCA+TGG - Chr7:66684544-66684563 MsG0780039611.01.T01:three_prime_UTR 35.0%
!!! ACCAAATGGTTTTGTTTCTG+AGG - Chr7:66684811-66684830 MsG0780039611.01.T01:three_prime_UTR 35.0%
!!! ATATTTTAAAGTTGGGGAGG+GGG - Chr7:66686328-66686347 MsG0780039611.01.T01:three_prime_UTR 35.0%
!!! CTTTGTTTTTCATCAGGATG+AGG + Chr7:66683895-66683914 None:intergenic 35.0%
!!! GCAATATTTTAAAGTTGGGG+AGG - Chr7:66686325-66686344 MsG0780039611.01.T01:three_prime_UTR 35.0%
AACATATGATGCAGGTGACA+TGG - Chr7:66687839-66687858 MsG0780039611.01.T01:intron 40.0%
AATCCTCTAGCTGTAAGTTG+AGG + Chr7:66688066-66688085 None:intergenic 40.0%
ACAAATTGGATGCAGGAATG+TGG - Chr7:66688259-66688278 MsG0780039611.01.T01:intron 40.0%
ACATAGGAACATAACACCGT+GGG + Chr7:66688136-66688155 None:intergenic 40.0%
ACATATGATGCAGGTGACAT+GGG - Chr7:66687840-66687859 MsG0780039611.01.T01:intron 40.0%
ACGAGAAGCTTAGAAGTGAA+TGG - Chr7:66688410-66688429 MsG0780039611.01.T01:intron 40.0%
AGAAAATCTTGGAGAAAGCC+TGG + Chr7:66687283-66687302 None:intergenic 40.0%
AGAAACAAACACAGACGCAT+CGG - Chr7:66689755-66689774 MsG0780039611.01.T01:CDS 40.0%
AGATGGCTAGACATTCACAT+TGG + Chr7:66687971-66687990 None:intergenic 40.0%
AGCAAATATCTGCAGTCACA+CGG - Chr7:66690172-66690191 MsG0780039611.01.T01:intron 40.0%
AGCTTCTCTGATGGTATCTA+TGG + Chr7:66685711-66685730 None:intergenic 40.0%
AGCTTCTTGCAATCACACAA+GGG + Chr7:66685382-66685401 None:intergenic 40.0%
AGTCTCTCAATATGCAACCT+GGG - Chr7:66686684-66686703 MsG0780039611.01.T01:CDS 40.0%
ATATGCATACACTAGCTCGT+AGG + Chr7:66688516-66688535 None:intergenic 40.0%
ATGCATGTAGTAATGAACGG+CGG - Chr7:66689814-66689833 MsG0780039611.01.T01:CDS 40.0%
ATTTCCTGCAGTCGTGATAA+TGG + Chr7:66690229-66690248 None:intergenic 40.0%
CAAATTGGATGCAGGAATGT+GGG - Chr7:66688260-66688279 MsG0780039611.01.T01:intron 40.0%
CAAGCAACTTAGAAAGCTCA+TGG - Chr7:66686390-66686409 MsG0780039611.01.T01:three_prime_UTR 40.0%
CACAAACTAATGAGCCTCTT+TGG - Chr7:66684705-66684724 MsG0780039611.01.T01:three_prime_UTR 40.0%
CACATGTTGAACAGGAATGA+AGG + Chr7:66687361-66687380 None:intergenic 40.0%
CATGAGCTTTCTAAGTTGCT+TGG + Chr7:66686392-66686411 None:intergenic 40.0%
CCAATGTGTTCAAATTGTGG+AGG - Chr7:66684328-66684347 MsG0780039611.01.T01:three_prime_UTR 40.0%
CCTCCACAATTTGAACACAT+TGG + Chr7:66684331-66684350 None:intergenic 40.0%
CCTCCTACAGTTAAGAAAAG+TGG + Chr7:66685747-66685766 None:intergenic 40.0%
CGAGAAGCTTAGAAGTGAAT+GGG - Chr7:66688411-66688430 MsG0780039611.01.T01:intron 40.0%
CTATGTGTAGCAATAAGTGC+AGG - Chr7:66688150-66688169 MsG0780039611.01.T01:intron 40.0%
CTGCACTTATTGCTACACAT+AGG + Chr7:66688152-66688171 None:intergenic 40.0%
GAAAGGCTAAGAAGAGAAGT+TGG + Chr7:66684936-66684955 None:intergenic 40.0%
GCCTCAGAAACAAAACCATT+TGG + Chr7:66684815-66684834 None:intergenic 40.0%
GGAGTAGTCATTAGTGTTAC+AGG + Chr7:66685076-66685095 None:intergenic 40.0%
GGGTTTGGATCTTTACACAA+AGG - Chr7:66690511-66690530 MsG0780039611.01.T01:intron 40.0%
GGTGCACAAATGGAACAAAT+TGG - Chr7:66688245-66688264 MsG0780039611.01.T01:intron 40.0%
GTAGACTGTTCACAAGTATC+TGG + Chr7:66689969-66689988 None:intergenic 40.0%
GTCACGAGAATTCACTACTT+AGG - Chr7:66684248-66684267 MsG0780039611.01.T01:three_prime_UTR 40.0%
GTGAAAAACTCCTTGAATGG+TGG - Chr7:66690468-66690487 MsG0780039611.01.T01:intron 40.0%
GTGGTTCAAGATATGCCAAA+TGG - Chr7:66685782-66685801 MsG0780039611.01.T01:intron 40.0%
GTTCCTCTTGTAATTGAAGG+TGG + Chr7:66684581-66684600 None:intergenic 40.0%
TAGTCTCTCAATATGCAACC+TGG - Chr7:66686683-66686702 MsG0780039611.01.T01:CDS 40.0%
TAGTTTCCTTAACCAGTGTC+CGG + Chr7:66686525-66686544 None:intergenic 40.0%
TATACCTGAGTGTTCTCTAG+CGG + Chr7:66688012-66688031 None:intergenic 40.0%
TATAGACCCTTGCTAAGCTT+AGG - Chr7:66687904-66687923 MsG0780039611.01.T01:intron 40.0%
TCACCACCTTCAATTACAAG+AGG - Chr7:66684575-66684594 MsG0780039611.01.T01:three_prime_UTR 40.0%
TCATGAAATTGTGTGTGACC+TGG - Chr7:66686975-66686994 MsG0780039611.01.T01:intron 40.0%
TCATGTTAACCGATGTTCTC+CGG - Chr7:66686503-66686522 MsG0780039611.01.T01:intron 40.0%
TCTATTCCAATCTCTCATGC+AGG - Chr7:66686924-66686943 MsG0780039611.01.T01:intron 40.0%
TCTCCATAAGGTAGATACCT+TGG - Chr7:66687237-66687256 MsG0780039611.01.T01:intron 40.0%
TCTTTACACAAAGGAAAGGG+TGG - Chr7:66690520-66690539 MsG0780039611.01.T01:intron 40.0%
TGCATTGCAGGAATATCTAC+AGG + Chr7:66689799-66689818 None:intergenic 40.0%
TTCACAAGATTACGGTGACA+TGG + Chr7:66687483-66687502 None:intergenic 40.0%
TTGCCTTCAACAATGCCTTT+AGG - Chr7:66684527-66684546 MsG0780039611.01.T01:three_prime_UTR 40.0%
! AAGACTTTTTGTGGTGAAGC+GGG + Chr7:66688376-66688395 None:intergenic 40.0%
! AGACCAAGGTATCTACCTTA+TGG + Chr7:66687243-66687262 None:intergenic 40.0%
! TGAACTTGGCTTTCCTCATA+GGG + Chr7:66687877-66687896 None:intergenic 40.0%
! TGAGTATCCAAGACTTGGTT+GGG - Chr7:66690491-66690510 MsG0780039611.01.T01:intron 40.0%
! TGTAAGTTGAGGATCCACAT+TGG + Chr7:66688055-66688074 None:intergenic 40.0%
! TTCGTGAGGTGAGTTTTCTA+AGG - Chr7:66685639-66685658 MsG0780039611.01.T01:intron 40.0%
!! ACGTAGCTTCTCTAAAATCC+CGG - Chr7:66687164-66687183 MsG0780039611.01.T01:intron 40.0%
!! CACCCACTTTTCTTAACTGT+AGG - Chr7:66685741-66685760 MsG0780039611.01.T01:intron 40.0%
!! CCACTTTTCTTAACTGTAGG+AGG - Chr7:66685744-66685763 MsG0780039611.01.T01:intron 40.0%
!! GAGTTTGGTAACGACGTAAT+TGG + Chr7:66684470-66684489 None:intergenic 40.0%
!! TGACCTAAAGGCATTGTTGA+AGG + Chr7:66684533-66684552 None:intergenic 40.0%
!! TGCAGGAAATGTTGATGGTA+GGG - Chr7:66690239-66690258 MsG0780039611.01.T01:CDS 40.0%
!! TTGGTAACGACGTAATTGGA+CGG + Chr7:66684466-66684485 None:intergenic 40.0%
AAACAAACACAGACGCATCG+GGG - Chr7:66689757-66689776 MsG0780039611.01.T01:CDS 45.0%
AACCATGCCTAAGCTTAGCA+AGG + Chr7:66687914-66687933 None:intergenic 45.0%
ACCATGCCTAAGCTTAGCAA+GGG + Chr7:66687913-66687932 None:intergenic 45.0%
ACGACTGCAGGAAATGTTGA+TGG - Chr7:66690234-66690253 MsG0780039611.01.T01:CDS 45.0%
ACTTGTGAACAGTCTACCGA+CGG - Chr7:66689972-66689991 MsG0780039611.01.T01:CDS 45.0%
AGAAAACTCACCTCACGAAC+AGG + Chr7:66685638-66685657 None:intergenic 45.0%
AGGACGTTAGGGTAATGACA+AGG - Chr7:66688285-66688304 MsG0780039611.01.T01:intron 45.0%
AGGGGGAAAACACAAAGCTA+AGG - Chr7:66686345-66686364 MsG0780039611.01.T01:three_prime_UTR 45.0%
ATACCTGAGTGTTCTCTAGC+GGG + Chr7:66688011-66688030 None:intergenic 45.0%
ATCCAAACCCAACCAAGTCT+TGG + Chr7:66690501-66690520 None:intergenic 45.0%
ATGTGAGCCATCTCTTGCAT+TGG + Chr7:66688457-66688476 None:intergenic 45.0%
ATTGCCAAAGGACATGACCA+TGG - Chr7:66688475-66688494 MsG0780039611.01.T01:intron 45.0%
CACATAGGAACATAACACCG+TGG + Chr7:66688137-66688156 None:intergenic 45.0%
CAGAAATGGTGCTCTACAAC+TGG - Chr7:66685439-66685458 MsG0780039611.01.T01:intron 45.0%
CGCGTGAAAAACTCCTTGAA+TGG - Chr7:66690465-66690484 MsG0780039611.01.T01:intron 45.0%
CTAGACATTCACATTGGCGT+TGG + Chr7:66687965-66687984 None:intergenic 45.0%
CTTGCTAACTAGTGCTCTCA+GGG - Chr7:66688915-66688934 MsG0780039611.01.T01:CDS 45.0%
GAAACAAACACAGACGCATC+GGG - Chr7:66689756-66689775 MsG0780039611.01.T01:CDS 45.0%
GAACAACCTGCATGAGAGAT+TGG + Chr7:66686933-66686952 None:intergenic 45.0%
GAATGGGACATACTCTCCAA+CGG - Chr7:66688427-66688446 MsG0780039611.01.T01:intron 45.0%
GAGCTTCTTGCAATCACACA+AGG + Chr7:66685383-66685402 None:intergenic 45.0%
GATCCTCAACTTACAGCTAG+AGG - Chr7:66688060-66688079 MsG0780039611.01.T01:intron 45.0%
GCTATGTCCATCTGGTAACA+CGG + Chr7:66689878-66689897 None:intergenic 45.0%
GGCAAAATCACGAGTATTCG+CGG + Chr7:66687427-66687446 None:intergenic 45.0%
GGTAATGACAAGGAAGAGTG+TGG - Chr7:66688295-66688314 MsG0780039611.01.T01:intron 45.0%
GTACTTGCTCGATCTCCATA+AGG - Chr7:66687225-66687244 MsG0780039611.01.T01:intron 45.0%
GTCTATAGAGCTGGTGAACT+TGG + Chr7:66687891-66687910 None:intergenic 45.0%
TAGAACCACTCTCTCAGTGA+TGG - Chr7:66686453-66686472 MsG0780039611.01.T01:intron 45.0%
TAGCAATAAGTGCAGGAGGA+AGG - Chr7:66688157-66688176 MsG0780039611.01.T01:intron 45.0%
TCAATCCACACGTACCAATG+TGG - Chr7:66688038-66688057 MsG0780039611.01.T01:intron 45.0%
TCTTGAACCACACAACCAGA+AGG + Chr7:66685773-66685792 None:intergenic 45.0%
TCTTGCTAACTAGTGCTCTC+AGG - Chr7:66688914-66688933 MsG0780039611.01.T01:CDS 45.0%
TGCTCTCAGGGCAATGATTA+AGG - Chr7:66688927-66688946 MsG0780039611.01.T01:CDS 45.0%
TGGATACTCACCACCATTCA+AGG + Chr7:66690481-66690500 None:intergenic 45.0%
TGTGTAGCAATAAGTGCAGG+AGG - Chr7:66688153-66688172 MsG0780039611.01.T01:intron 45.0%
TTACACAAAGGAAAGGGTGG+TGG - Chr7:66690523-66690542 MsG0780039611.01.T01:intron 45.0%
TTACCAGATGGACATAGCGA+CGG - Chr7:66689880-66689899 MsG0780039611.01.T01:CDS 45.0%
TTAGCAAGGGTCTATAGAGC+TGG + Chr7:66687900-66687919 None:intergenic 45.0%
TTAGTGCAGCAACCTCAGTT+TGG - Chr7:66688347-66688366 MsG0780039611.01.T01:intron 45.0%
TTATGTTGCGCTTCTTCCGT+CGG - Chr7:66689846-66689865 MsG0780039611.01.T01:CDS 45.0%
TTCTAAGCTTCTCGTTGCGA+AGG + Chr7:66688405-66688424 None:intergenic 45.0%
TTTGCAAGCAGCATGCAGAA+GGG - Chr7:66685663-66685682 MsG0780039611.01.T01:intron 45.0%
! AAGGAAGAGTGTGGATGATC+CGG - Chr7:66688304-66688323 MsG0780039611.01.T01:intron 45.0%
! ACATTCACATTGGCGTTGGA+GGG + Chr7:66687961-66687980 None:intergenic 45.0%
! ATCCAAGACTTGGTTGGGTT+TGG - Chr7:66690496-66690515 MsG0780039611.01.T01:intron 45.0%
! CAGTTGTAGAGCACCATTTC+TGG + Chr7:66685441-66685460 None:intergenic 45.0%
! CATAACACCGTGGGTTATTG+TGG + Chr7:66688127-66688146 None:intergenic 45.0%
! CATTGGTACGTGTGGATTGA+TGG + Chr7:66688038-66688057 None:intergenic 45.0%
! GCTAAGCTTAGGCATGGTTT+TGG - Chr7:66687915-66687934 MsG0780039611.01.T01:intron 45.0%
! GTGAACTTGGCTTTCCTCAT+AGG + Chr7:66687878-66687897 None:intergenic 45.0%
! GTGAGTATCCAAGACTTGGT+TGG - Chr7:66690490-66690509 MsG0780039611.01.T01:intron 45.0%
! TCTGAGGCTTCTAGAGAAAG+TGG - Chr7:66684827-66684846 MsG0780039611.01.T01:three_prime_UTR 45.0%
! TGAACTTGCTTTGGCTGCAA+TGG - Chr7:66684664-66684683 MsG0780039611.01.T01:three_prime_UTR 45.0%
! TTCAAGGAGTTTTTCACGCG+CGG + Chr7:66690465-66690484 None:intergenic 45.0%
! TTTTGCAAGCAGCATGCAGA+AGG - Chr7:66685662-66685681 MsG0780039611.01.T01:intron 45.0%
!! AGCGAGTGGATCACTTTTGA+CGG - Chr7:66689936-66689955 MsG0780039611.01.T01:CDS 45.0%
!! CTGCAGGAAATGTTGATGGT+AGG - Chr7:66690238-66690257 MsG0780039611.01.T01:CDS 45.0%
!! AATTAAAATAATATTCTTAT+AGG + Chr7:66686956-66686975 None:intergenic 5.0%
!! ATTAAAATAATATTCTTATA+GGG + Chr7:66686955-66686974 None:intergenic 5.0%
AACCAGTGTCCGGAGAACAT+CGG + Chr7:66686515-66686534 None:intergenic 50.0%
AACTGTAGGAGGCTTCCTTC+TGG - Chr7:66685755-66685774 MsG0780039611.01.T01:intron 50.0%
ACACTTGCCGGCAAGTTTCT+AGG - Chr7:66684439-66684458 MsG0780039611.01.T01:three_prime_UTR 50.0%
ACCACCATTATCACGACTGC+AGG - Chr7:66690222-66690241 MsG0780039611.01.T01:CDS 50.0%
ACCAGCTGAAGCTTCTCTGA+TGG + Chr7:66685720-66685739 None:intergenic 50.0%
ACCATCAGAGAAGCTTCAGC+TGG - Chr7:66685716-66685735 MsG0780039611.01.T01:intron 50.0%
ACCCTTGCTAAGCTTAGGCA+TGG - Chr7:66687909-66687928 MsG0780039611.01.T01:intron 50.0%
ACCTCACGAACAGGAACCAA+TGG + Chr7:66685629-66685648 None:intergenic 50.0%
AGGATCCACATTGGTACGTG+TGG + Chr7:66688046-66688065 None:intergenic 50.0%
ATTGAAAGTGGCGCGTGAGA+AGG - Chr7:66690413-66690432 MsG0780039611.01.T01:intron 50.0%
CACTTGCCGGCAAGTTTCTA+GGG - Chr7:66684440-66684459 MsG0780039611.01.T01:three_prime_UTR 50.0%
CTCAATATGCAACCTGGGCT+AGG - Chr7:66686689-66686708 MsG0780039611.01.T01:CDS 50.0%
GACCGAGTTTGTACACTTGC+CGG - Chr7:66684427-66684446 MsG0780039611.01.T01:three_prime_UTR 50.0%
GAGATGGCTCACATTGCCAA+AGG - Chr7:66688463-66688482 MsG0780039611.01.T01:intron 50.0%
GCATACACTAGCTCGTAGGA+GGG + Chr7:66688512-66688531 None:intergenic 50.0%
GGAGTGGTAATCACGATGAC+GGG - Chr7:66689902-66689921 MsG0780039611.01.T01:CDS 50.0%
GGGAGTGGTAATCACGATGA+CGG - Chr7:66689901-66689920 MsG0780039611.01.T01:CDS 50.0%
GGTGGTGAGTATCCAAGACT+TGG - Chr7:66690486-66690505 MsG0780039611.01.T01:intron 50.0%
GTAATGTTAACCGGTGCTCC+CGG + Chr7:66686652-66686671 None:intergenic 50.0%
GTTGCCATGGTCATGTCCTT+TGG + Chr7:66688482-66688501 None:intergenic 50.0%
TACCAGATGGACATAGCGAC+GGG - Chr7:66689881-66689900 MsG0780039611.01.T01:CDS 50.0%
TACCTGAGTGTTCTCTAGCG+GGG + Chr7:66688010-66688029 None:intergenic 50.0%
TATGATGCAGGTGACATGGG+TGG - Chr7:66687843-66687862 MsG0780039611.01.T01:intron 50.0%
TATGTTGCGCTTCTTCCGTC+GGG - Chr7:66689847-66689866 MsG0780039611.01.T01:CDS 50.0%
TGCATACACTAGCTCGTAGG+AGG + Chr7:66688513-66688532 None:intergenic 50.0%
TGCCGGCAAGTGTACAAACT+CGG + Chr7:66684432-66684451 None:intergenic 50.0%
TGTCGTTGAGTCAACTTGCC+AGG - Chr7:66687262-66687281 MsG0780039611.01.T01:intron 50.0%
TTGCAAGCAGCATGCAGAAG+GGG - Chr7:66685664-66685683 MsG0780039611.01.T01:intron 50.0%
! AAAGGAAAGGGTGGTGGTTC+GGG - Chr7:66690529-66690548 MsG0780039611.01.T01:intron 50.0%
! AGGAAGAGTGTGGATGATCC+GGG - Chr7:66688305-66688324 MsG0780039611.01.T01:intron 50.0%
! CAAAGGAAAGGGTGGTGGTT+CGG - Chr7:66690528-66690547 MsG0780039611.01.T01:intron 50.0%
! GACATTCACATTGGCGTTGG+AGG + Chr7:66687962-66687981 None:intergenic 50.0%
! GTTGACTCAACGACAGACCA+AGG + Chr7:66687257-66687276 None:intergenic 50.0%
! TGTTCTCCGGACACTGGTTA+AGG - Chr7:66686516-66686535 MsG0780039611.01.T01:intron 50.0%
!! TCCATTGGTTCCTGTTCGTG+AGG - Chr7:66685625-66685644 MsG0780039611.01.T01:intron 50.0%
!! TCCTGCAGTCGTGATAATGG+TGG + Chr7:66690226-66690245 None:intergenic 50.0%
!! TGGTGGTTCGGGTATTGACT+CGG - Chr7:66690540-66690559 MsG0780039611.01.T01:intron 50.0%
!!! ATGGTTTTGGCGCACAACGT+TGG - Chr7:66687928-66687947 MsG0780039611.01.T01:intron 50.0%
!!! TGGTTTTGGCGCACAACGTT+GGG - Chr7:66687929-66687948 MsG0780039611.01.T01:intron 50.0%
AAAGCTCGCGGTGGAATCAG+TGG - Chr7:66689996-66690015 MsG0780039611.01.T01:CDS 55.0%
AACCGATGTTCTCCGGACAC+TGG - Chr7:66686510-66686529 MsG0780039611.01.T01:intron 55.0%
AGCAGCATGCAGAAGGGGTA+TGG - Chr7:66685669-66685688 MsG0780039611.01.T01:intron 55.0%
CACCGTCGATGCACAAACTC+CGG + Chr7:66688229-66688248 None:intergenic 55.0%
CGCGGTGGAATCAGTGGAAA+CGG - Chr7:66690002-66690021 MsG0780039611.01.T01:CDS 55.0%
CGGTGGTCCAATGCAAGAGA+TGG - Chr7:66688447-66688466 MsG0780039611.01.T01:intron 55.0%
CTCTTGCATTGGACCACCGT+TGG + Chr7:66688446-66688465 None:intergenic 55.0%
GAATGTGGGCGAGGACGTTA+GGG - Chr7:66688274-66688293 MsG0780039611.01.T01:intron 55.0%
GGGAACCATCACTGAGAGAG+TGG + Chr7:66686461-66686480 None:intergenic 55.0%
GGTTTCGCCGTGTTACCAGA+TGG - Chr7:66689868-66689887 MsG0780039611.01.T01:CDS 55.0%
TGAAGCGGGTAGCCAAACTG+AGG + Chr7:66688362-66688381 None:intergenic 55.0%
TGCACTAAGCACAATCCCCG+TGG + Chr7:66688335-66688354 None:intergenic 55.0%
TGCCGGAGTTTGTGCATCGA+CGG - Chr7:66688224-66688243 MsG0780039611.01.T01:intron 55.0%
TGGGACATACTCTCCAACGG+TGG - Chr7:66688430-66688449 MsG0780039611.01.T01:intron 55.0%
! AACCAATGATCCGGGAGCAC+CGG - Chr7:66686639-66686658 MsG0780039611.01.T01:exon 55.0%
! GAGGCTTCCTTCTGGTTGTG+TGG - Chr7:66685763-66685782 MsG0780039611.01.T01:intron 55.0%
! GCAGCATGCAGAAGGGGTAT+GGG - Chr7:66685670-66685689 MsG0780039611.01.T01:intron 55.0%
! GTGCATCGACGGTGCACAAA+TGG - Chr7:66688235-66688254 MsG0780039611.01.T01:intron 55.0%
AACCGGTGCTCCCGGATCAT+TGG + Chr7:66686644-66686663 None:intergenic 60.0%
CTCCCCGCTAGAGAACACTC+AGG - Chr7:66688005-66688024 MsG0780039611.01.T01:intron 60.0%
CTCCCGTCGCTATGTCCATC+TGG + Chr7:66689886-66689905 None:intergenic 60.0%
GATGGACATAGCGACGGGAG+TGG - Chr7:66689886-66689905 MsG0780039611.01.T01:CDS 60.0%
GGAATGTGGGCGAGGACGTT+AGG - Chr7:66688273-66688292 MsG0780039611.01.T01:intron 60.0%
GGACGGCCCTAGAAACTTGC+CGG + Chr7:66684449-66684468 None:intergenic 60.0%
GGAGGGAGACACAGTTGCCA+TGG + Chr7:66688495-66688514 None:intergenic 60.0%
GGTAACACGGCGAAACCCGA+CGG + Chr7:66689865-66689884 None:intergenic 60.0%
TCTACCGACGGCAAAGCTCG+CGG - Chr7:66689984-66690003 MsG0780039611.01.T01:CDS 60.0%
TGGATGATCCGGGTGAGCCA+CGG - Chr7:66688315-66688334 MsG0780039611.01.T01:intron 60.0%
TGGATGCAGGAATGTGGGCG+AGG - Chr7:66688265-66688284 MsG0780039611.01.T01:intron 60.0%
TGGCGCGTGAGAAGGACATG+AGG - Chr7:66690421-66690440 MsG0780039611.01.T01:intron 60.0%
! TGCAGAAGGGGTATGGGCAG+TGG - Chr7:66685676-66685695 MsG0780039611.01.T01:intron 60.0%
!! ATCACGATGACGGGTCGCAG+CGG - Chr7:66689911-66689930 MsG0780039611.01.T01:CDS 60.0%
!! GAGAGGAAGCATCCTAGCCC+AGG + Chr7:66686704-66686723 None:intergenic 60.0%
CACAATCCCCGTGGCTCACC+CGG + Chr7:66688326-66688345 None:intergenic 65.0%
GATGATCCGGGTGAGCCACG+GGG - Chr7:66688317-66688336 MsG0780039611.01.T01:intron 65.0%
GGATGATCCGGGTGAGCCAC+GGG - Chr7:66688316-66688335 MsG0780039611.01.T01:intron 65.0%
TCCACCGCGAGCTTTGCCGT+CGG + Chr7:66689991-66690010 None:intergenic 65.0%
ACCGACGGCAAAGCTCGCGG+TGG - Chr7:66689987-66690006 MsG0780039611.01.T01:CDS 70.0%
GGGTCGCAGCGGAGAGCGAG+TGG - Chr7:66689922-66689941 MsG0780039611.01.T01:CDS 75.0%
Chromosome Type Strat End Strand Name
Chr7 gene 66683877 66690750 66683877 ID=MsG0780039611.01;Name=MsG0780039611.01
Chr7 mRNA 66683877 66690750 66683877 ID=MsG0780039611.01.T01;Parent=MsG0780039611.01;Name=MsG0780039611.01.T01;_AED=0.33;_eAED=0.33;_QI=0|0.71|0.62|1|0.71|0.5|8|1442|372
Chr7 exon 66683877 66684910 66683877 ID=MsG0780039611.01.T01:exon:13176;Parent=MsG0780039611.01.T01
Chr7 exon 66686102 66686467 66686102 ID=MsG0780039611.01.T01:exon:13175;Parent=MsG0780039611.01.T01
Chr7 exon 66686601 66686774 66686601 ID=MsG0780039611.01.T01:exon:13174;Parent=MsG0780039611.01.T01
Chr7 exon 66688813 66689028 66688813 ID=MsG0780039611.01.T01:exon:13173;Parent=MsG0780039611.01.T01
Chr7 exon 66689167 66689268 66689167 ID=MsG0780039611.01.T01:exon:13172;Parent=MsG0780039611.01.T01
Chr7 exon 66689729 66690078 66689729 ID=MsG0780039611.01.T01:exon:13171;Parent=MsG0780039611.01.T01
Chr7 exon 66690191 66690392 66690191 ID=MsG0780039611.01.T01:exon:13170;Parent=MsG0780039611.01.T01
Chr7 exon 66690634 66690750 66690634 ID=MsG0780039611.01.T01:exon:13169;Parent=MsG0780039611.01.T01
Chr7 CDS 66690634 66690750 66690634 ID=MsG0780039611.01.T01:cds;Parent=MsG0780039611.01.T01
Chr7 CDS 66690191 66690392 66690191 ID=MsG0780039611.01.T01:cds;Parent=MsG0780039611.01.T01
Chr7 CDS 66689729 66690078 66689729 ID=MsG0780039611.01.T01:cds;Parent=MsG0780039611.01.T01
Chr7 CDS 66689167 66689268 66689167 ID=MsG0780039611.01.T01:cds;Parent=MsG0780039611.01.T01
Chr7 CDS 66688813 66689028 66688813 ID=MsG0780039611.01.T01:cds;Parent=MsG0780039611.01.T01
Chr7 CDS 66686643 66686774 66686643 ID=MsG0780039611.01.T01:cds;Parent=MsG0780039611.01.T01
Chr7 three_prime_UTR 66686601 66686642 66686601 ID=MsG0780039611.01.T01:three_prime_utr;Parent=MsG0780039611.01.T01
Chr7 three_prime_UTR 66686102 66686467 66686102 ID=MsG0780039611.01.T01:three_prime_utr;Parent=MsG0780039611.01.T01
Chr7 three_prime_UTR 66683877 66684910 66683877 ID=MsG0780039611.01.T01:three_prime_utr;Parent=MsG0780039611.01.T01
Gene Sequence

>MsG0780039611.01.T01

ATGTTTAAAGAGTGTCCTCATCCTGATGAAAAACAAAGACTTGAACTTAGCAAAAGGCTTTGTTTGGAAACAAGACAAGTCAAGTTTTGGTTCCAAAATAGAAGAACACAAATGAAGACTCAATTGGAACGTCACGAGAATTCACTACTTAGGCAAGCAAATGATAAATTAAGAGCTGAGAACATGTCAATAAGAGAAGCAATGAGGAATCCAATGTGTTCAAATTGTGGAGGACTAGCAATTATTAGTGAAATTTCACTTGAAGAACAACATCTAAGAATTGAGAATGCAAGATTAAAAGATGAATTAGACCGAGTTTGTCAAGATTTTGGCATGGTGTCAATGTCACCACCTTCAATTACAAGAGGAACAAATATGGTAACAAATACTAATAGTAATGGTTTTGATAGATCAATGGAGAGGTCTATGTTTCTTGAACTTGCTTTGGCTGCAATGGATGAGTTAGTGAAGATGGCACAAACTAATGAGCCTCTTTGGATTAGAAGTGTTGAAAGTGGAAAAGAAATTTTTAATCATGAGGAATATACAAGGATTATTAGTACTCCTTGTATTGGTTTAAAACCAAATGGTTTTGTTTCTGAGGCTTCTAGAGAAAGTGGTGTTGTTATCATAAACAGCTTGGCTCTTGTTGAAACTTTAATGGATTCAAATCGATGGTCAGAGATGTTCCCTTGTGTGATTGCAAGAAGCTCCACAACTGAAGTGATATCTAGTGGAATAAATGGAACCAGAAATGGTGCTCTACAACTGATGCAAGCTGAACTTCAAGTACTTTCTCCATTGGTTCCTGTTCGTGAGGTGAGTTTTCTAAGGTTTTGCAAGCAGCATGCAGAAGGGGTATGGGCAGTGGTTGATGTGTCCATAGATACCATCAGAGAAGCTTCAGCTGGTGCACCCACTTTTCTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTTCAAGATATGCCAAATGGTTACTCTAAGGTGACATGGGTGGAGCATGCAGAATATGAGGAAAGCCAAGTTCACCAGCTCTATAGACCCTTGCTAAGCTTAGGCATGGTTTTGGCGCACAACGTTGGGTTGCAACCCTCCAACGCCAATGTGAATGTCTAG

Protein sequence

>MsG0780039611.01.T01

MFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKTQLERHENSLLRQANDKLRAENMSIREAMRNPMCSNCGGLAIISEISLEEQHLRIENARLKDELDRVCQDFGMVSMSPPSITRGTNMVTNTNSNGFDRSMERSMFLELALAAMDELVKMAQTNEPLWIRSVESGKEIFNHEEYTRIISTPCIGLKPNGFVSEASRESGVVIINSLALVETLMDSNRWSEMFPCVIARSSTTEVISSGINGTRNGALQLMQAELQVLSPLVPVREVSFLRFCKQHAEGVWAVVDVSIDTIREASAGAPTFLNCRRLPSGCVVQDMPNGYSKVTWVEHAEYEESQVHQLYRPLLSLGMVLAHNVGLQPSNANVNV*