AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580028418.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028418.01.T01 MTR_5g070850 91.071 112 10 0 61 172 401 512 2.10e-71 224
MsG0580028418.01.T01 MTR_5g070920 80.374 107 20 1 66 172 405 510 2.15e-57 187
MsG0580028418.01.T01 MTR_5g070710 81.308 107 19 1 66 172 403 508 2.72e-57 187
MsG0580028418.01.T01 MTR_5g070830 77.570 107 24 0 66 172 516 622 3.80e-56 186
MsG0580028418.01.T01 MTR_5g070690 77.570 107 24 0 66 172 404 510 1.01e-55 183
MsG0580028418.01.T01 MTR_5g070800 77.570 107 24 0 66 172 404 510 1.01e-55 183
MsG0580028418.01.T01 MTR_5g070973 79.000 100 21 0 66 165 77 176 1.03e-55 174
MsG0580028418.01.T01 MTR_5g070700 64.706 136 46 2 37 172 378 511 5.91e-54 178
MsG0580028418.01.T01 MTR_8g104100 51.880 133 63 1 37 169 135 266 6.81e-47 154
MsG0580028418.01.T01 MTR_8g104030 51.880 133 63 1 37 169 154 285 1.55e-46 154
MsG0580028418.01.T01 MTR_5g070840 75.610 82 20 0 66 147 77 158 2.76e-42 139
MsG0580028418.01.T01 MTR_6g084900 49.219 128 64 1 37 164 141 267 4.75e-42 142
MsG0580028418.01.T01 MTR_6g084770 48.837 129 65 1 39 167 381 508 1.64e-37 135
MsG0580028418.01.T01 MTR_8g091680 48.092 131 66 2 38 168 327 455 6.56e-37 132
MsG0580028418.01.T01 MTR_8g091690 54.717 106 47 1 62 167 373 477 1.45e-36 132
MsG0580028418.01.T01 MTR_0451s0010 47.656 128 65 2 38 165 198 323 3.62e-35 125
MsG0580028418.01.T01 MTR_0638s0020 46.457 127 66 2 38 164 305 429 7.97e-33 121
MsG0580028418.01.T01 MTR_2g065360 45.312 128 68 2 38 165 348 473 1.82e-32 120
MsG0580028418.01.T01 MTR_5g070860 90.000 60 6 0 1 60 277 336 2.42e-29 110
MsG0580028418.01.T01 MTR_5g094500 50.000 96 47 1 66 161 40 134 2.88e-28 102
MsG0580028418.01.T01 MTR_4g057645 47.525 101 51 2 66 165 36 135 3.28e-28 102
MsG0580028418.01.T01 MTR_3g058220 50.515 97 47 1 66 162 404 499 3.76e-28 109
MsG0580028418.01.T01 MTR_4g089025 38.806 134 80 2 29 162 385 516 4.03e-28 109
MsG0580028418.01.T01 MTR_3g058380 48.958 96 48 1 66 161 324 418 3.13e-27 106
MsG0580028418.01.T01 MTR_4g071710 40.625 128 73 3 39 165 389 514 3.88e-27 106
MsG0580028418.01.T01 MTR_3g058390 48.958 96 48 1 66 161 404 498 6.05e-27 105
MsG0580028418.01.T01 MTR_3g058210 48.958 96 48 1 66 161 406 500 6.29e-27 105
MsG0580028418.01.T01 MTR_7g075610 41.221 131 73 3 29 159 372 498 1.18e-26 105
MsG0580028418.01.T01 MTR_0554s0020 48.454 97 49 1 66 162 405 500 1.54e-26 104
MsG0580028418.01.T01 MTR_5g094510 48.039 102 52 1 66 167 143 243 1.80e-26 101
MsG0580028418.01.T01 MTR_3g058240 45.714 105 53 2 56 157 357 460 2.37e-26 103
MsG0580028418.01.T01 MTR_6g462640 44.954 109 56 2 56 161 391 498 2.79e-26 104
MsG0580028418.01.T01 MTR_1g442730 46.392 97 51 1 66 162 403 498 2.98e-26 103
MsG0580028418.01.T01 MTR_2g010530 50.515 97 47 1 66 162 397 492 3.97e-26 103
MsG0580028418.01.T01 MTR_0059s0170 46.875 96 50 1 66 161 405 499 3.98e-26 103
MsG0580028418.01.T01 MTR_1g035190 45.000 100 54 1 66 165 389 487 4.18e-26 103
MsG0580028418.01.T01 MTR_4g089020 38.806 134 80 2 29 162 360 491 4.73e-26 103
MsG0580028418.01.T01 MTR_3g058250 44.762 105 54 2 56 157 391 494 4.89e-26 103
MsG0580028418.01.T01 MTR_4g026080 43.299 97 54 1 66 162 103 198 5.08e-26 98.6
MsG0580028418.01.T01 MTR_7g075600 48.936 94 47 1 66 159 405 497 5.27e-26 103
MsG0580028418.01.T01 MTR_7g075580 46.739 92 48 1 66 157 405 495 5.87e-26 103
MsG0580028418.01.T01 MTR_4g089030 38.060 134 81 2 29 162 384 515 6.26e-26 103
MsG0580028418.01.T01 MTR_4g089055 38.060 134 81 2 29 162 382 513 7.48e-26 103
MsG0580028418.01.T01 MTR_1g035140 45.000 100 54 1 66 165 403 501 9.44e-26 102
MsG0580028418.01.T01 MTR_3g058400 44.954 109 56 2 56 161 392 499 9.65e-26 102
MsG0580028418.01.T01 MTR_8g020950 39.130 138 80 3 28 165 374 507 1.22e-25 102
MsG0580028418.01.T01 MTR_5g094570 46.465 99 52 1 66 164 403 500 1.41e-25 102
MsG0580028418.01.T01 MTR_1g103680 43.750 96 53 1 66 161 401 495 4.77e-25 100
MsG0580028418.01.T01 MTR_5g095220 46.875 96 50 1 66 161 373 467 4.80e-25 100
MsG0580028418.01.T01 MTR_3g057980 45.833 96 51 1 66 161 399 493 5.12e-25 100
MsG0580028418.01.T01 MTR_8g020940 39.535 129 76 2 37 165 379 505 6.15e-25 100
MsG0580028418.01.T01 MTR_7g103450 39.286 140 79 4 30 167 383 518 6.30e-25 100
MsG0580028418.01.T01 MTR_5g094520 47.917 96 49 1 66 161 329 423 6.66e-25 99.8
MsG0580028418.01.T01 MTR_3g058060 43.299 97 54 1 66 162 407 502 7.11e-25 100
MsG0580028418.01.T01 MTR_3g057860 35.075 134 85 2 29 162 369 500 8.25e-25 100
MsG0580028418.01.T01 MTR_5g073250 47.475 99 51 1 66 164 403 500 8.37e-25 100
MsG0580028418.01.T01 MTR_5g095260 39.200 125 74 2 37 161 376 498 8.74e-25 100
MsG0580028418.01.T01 MTR_1g107300 40.580 138 68 5 37 165 76 208 9.07e-25 95.9
MsG0580028418.01.T01 MTR_3g058000 44.330 97 53 1 66 162 408 503 1.02e-24 99.8
MsG0580028418.01.T01 MTR_3g057870 37.313 134 82 2 29 162 105 236 1.05e-24 96.3
MsG0580028418.01.T01 MTR_3g057900 47.423 97 49 2 66 161 399 494 1.06e-24 99.8
MsG0580028418.01.T01 MTR_5g094550 46.465 99 52 1 66 164 403 500 1.09e-24 99.8
MsG0580028418.01.T01 MTR_5g073320 47.475 99 51 1 66 164 404 501 1.10e-24 99.8
MsG0580028418.01.T01 MTR_3g057970 46.392 97 50 2 66 161 393 488 1.55e-24 99.4
MsG0580028418.01.T01 MTR_5g073230 46.465 99 52 1 66 164 392 489 1.57e-24 99.4
MsG0580028418.01.T01 MTR_5g094540 46.465 99 52 1 66 164 403 500 1.57e-24 99.4
MsG0580028418.01.T01 MTR_5g094560 48.485 99 50 1 66 164 403 500 1.59e-24 99.4
MsG0580028418.01.T01 MTR_5g095290 38.400 125 75 2 37 161 375 497 1.64e-24 99.4
MsG0580028418.01.T01 MTR_3g076530 38.710 124 74 2 37 160 378 499 2.00e-24 99.0
MsG0580028418.01.T01 MTR_1g031700 41.000 100 58 1 62 161 396 494 2.18e-24 99.0
MsG0580028418.01.T01 MTR_3g058230 44.037 109 52 2 56 161 318 420 2.31e-24 98.2
MsG0580028418.01.T01 MTR_5g094520 47.917 96 49 1 66 161 434 528 2.40e-24 99.0
MsG0580028418.01.T01 MTR_1g103670 41.584 101 58 1 61 161 395 494 2.57e-24 98.6
MsG0580028418.01.T01 MTR_4g048580 47.475 99 51 1 66 164 403 500 2.93e-24 98.6
MsG0580028418.01.T01 MTR_7g075540 46.739 92 48 1 66 157 403 493 3.34e-24 98.2
MsG0580028418.01.T01 MTR_4g104610 37.778 135 79 3 30 164 369 498 3.37e-24 98.2
MsG0580028418.01.T01 MTR_5g094660 46.465 99 52 1 66 164 402 499 3.52e-24 98.2
MsG0580028418.01.T01 MTR_1g097240 40.870 115 66 2 47 161 381 493 3.55e-24 98.2
MsG0580028418.01.T01 MTR_3g057800 35.821 134 84 2 29 162 366 497 3.59e-24 98.2
MsG0580028418.01.T01 MTR_1g037370 43.750 96 53 1 66 161 397 491 3.63e-24 98.2
MsG0580028418.01.T01 MTR_4g104640 44.898 98 51 2 66 161 420 516 4.14e-24 98.2
MsG0580028418.01.T01 MTR_5g018980 35.821 134 84 2 29 162 373 504 4.25e-24 98.2
MsG0580028418.01.T01 MTR_3g436540 41.667 132 70 4 37 165 381 508 6.14e-24 97.8
MsG0580028418.01.T01 MTR_5g021390 37.984 129 77 3 39 166 389 515 8.84e-24 97.1
MsG0580028418.01.T01 MTR_4g026200 47.727 88 45 1 66 153 399 485 9.19e-24 97.1
MsG0580028418.01.T01 MTR_4g104570 39.683 126 72 3 37 162 75 196 1.84e-23 92.0
MsG0580028418.01.T01 MTR_5g073020 43.000 100 56 1 66 165 405 503 2.53e-23 95.9
MsG0580028418.01.T01 MTR_5g023680 43.478 92 51 1 66 157 375 465 2.74e-23 95.5
MsG0580028418.01.T01 MTR_6g035115 40.458 131 75 3 37 166 372 500 2.74e-23 95.9
MsG0580028418.01.T01 MTR_4g025940 41.758 91 52 1 67 157 78 167 2.90e-23 90.9
MsG0580028418.01.T01 MTR_5g019010 36.508 126 78 2 37 162 378 501 3.49e-23 95.5
MsG0580028418.01.T01 MTR_4g026030 43.158 95 53 1 66 160 247 340 4.00e-23 94.0
MsG0580028418.01.T01 MTR_8g046240 41.667 96 55 1 66 161 409 503 5.12e-23 95.1
MsG0580028418.01.T01 MTR_5g056720 42.708 96 52 2 66 161 330 422 7.36e-23 94.0
MsG0580028418.01.T01 MTR_5g045770 43.956 91 50 1 67 157 400 489 7.54e-23 94.4
MsG0580028418.01.T01 MTR_3g057910 43.158 95 53 1 67 161 407 500 8.03e-23 94.4
MsG0580028418.01.T01 MTR_7g012330 38.182 110 62 2 53 157 384 492 1.15e-22 94.0
MsG0580028418.01.T01 MTR_7g075390 43.617 94 52 1 66 159 407 499 1.28e-22 94.0
MsG0580028418.01.T01 MTR_7g012860 38.182 110 62 2 53 157 385 493 1.41e-22 93.6
MsG0580028418.01.T01 MTR_0287s0060 38.182 110 62 2 53 157 385 493 1.41e-22 93.6
MsG0580028418.01.T01 MTR_3g058110 41.667 96 55 1 66 161 408 502 1.73e-22 93.6
MsG0580028418.01.T01 MTR_1g023720 38.983 118 65 3 53 164 396 512 1.76e-22 93.6
MsG0580028418.01.T01 MTR_5g018990 36.508 126 78 2 37 162 379 502 2.18e-22 93.2
MsG0580028418.01.T01 MTR_4g102280 40.800 125 69 3 41 165 390 509 2.23e-22 93.2
MsG0580028418.01.T01 MTR_8g046210 39.583 96 57 1 66 161 409 503 2.24e-22 93.2
MsG0580028418.01.T01 MTR_4g104660 45.361 97 51 2 66 161 416 511 2.28e-22 93.2
MsG0580028418.01.T01 MTR_4g109470 45.192 104 52 2 66 165 402 504 2.53e-22 93.2
MsG0580028418.01.T01 MTR_1g107295 40.580 138 68 5 37 165 388 520 2.73e-22 92.8
MsG0580028418.01.T01 MTR_3g436390 46.154 104 49 3 66 166 402 501 2.87e-22 92.8
MsG0580028418.01.T01 MTR_4g104540 39.683 126 72 3 37 162 306 427 3.06e-22 92.4
MsG0580028418.01.T01 MTR_3g076560 46.067 89 46 2 66 153 418 505 4.60e-22 92.4
MsG0580028418.01.T01 MTR_0022s0290 37.795 127 76 3 37 162 391 515 6.25e-22 92.0
MsG0580028418.01.T01 MTR_5g094460 44.565 92 50 1 66 157 286 376 6.57e-22 90.9
MsG0580028418.01.T01 MTR_5g072980 41.000 100 58 1 66 165 405 503 9.27e-22 91.3
MsG0580028418.01.T01 MTR_5g072930 41.000 100 58 1 66 165 405 503 9.27e-22 91.3
MsG0580028418.01.T01 MTR_4g026050 43.478 92 51 1 66 157 399 489 1.00e-21 91.3
MsG0580028418.01.T01 MTR_1g023700 38.136 118 66 3 53 164 397 513 1.54e-21 90.9
MsG0580028418.01.T01 MTR_5g007450 34.646 127 80 3 37 162 372 496 1.74e-21 90.5
MsG0580028418.01.T01 MTR_4g025980 41.304 92 53 1 66 157 399 489 1.82e-21 90.5
MsG0580028418.01.T01 MTR_5g007550 33.858 127 81 3 37 162 372 496 3.04e-21 90.1
MsG0580028418.01.T01 MTR_4g025970 41.758 91 52 1 67 157 401 490 3.30e-21 89.7
MsG0580028418.01.T01 MTR_3g025260 43.810 105 54 2 66 166 405 508 3.39e-21 89.7
MsG0580028418.01.T01 MTR_1g023730 38.983 118 65 3 53 164 396 512 4.48e-21 89.4
MsG0580028418.01.T01 MTR_3g024520 39.024 123 69 3 47 165 387 507 5.56e-21 89.4
MsG0580028418.01.T01 MTR_5g007460 33.858 127 81 3 37 162 351 475 8.70e-21 88.6
MsG0580028418.01.T01 MTR_3g025230 39.024 123 69 3 47 165 387 507 9.13e-21 88.6
MsG0580028418.01.T01 MTR_5g094840 50.000 76 37 1 66 141 409 483 4.92e-20 86.7
MsG0580028418.01.T01 MTR_8g020960 35.200 125 78 3 37 160 380 502 6.22e-20 86.3
MsG0580028418.01.T01 MTR_4g078110 40.000 95 56 1 66 160 380 473 1.45e-19 85.1
MsG0580028418.01.T01 MTR_4g102310 37.600 125 73 3 41 165 384 503 1.52e-19 85.1
MsG0580028418.01.T01 MTR_4g133750 42.718 103 51 3 66 162 401 501 1.54e-19 85.1
MsG0580028418.01.T01 MTR_4g062510 35.461 141 74 5 37 165 387 522 4.31e-19 84.0
MsG0580028418.01.T01 MTR_6g034965 40.777 103 52 3 66 162 398 497 4.50e-19 84.0
MsG0580028418.01.T01 MTR_1g116890 41.237 97 55 2 66 161 409 504 9.45e-19 82.8
MsG0580028418.01.T01 MTR_8g076290 37.984 129 77 3 39 166 381 507 1.11e-18 82.8
MsG0580028418.01.T01 MTR_6g035100 41.748 103 51 3 66 162 398 497 1.49e-18 82.4
MsG0580028418.01.T01 MTR_0171s0020 43.137 102 52 3 66 165 409 506 1.97e-18 82.0
MsG0580028418.01.T01 MTR_3g077460 49.275 69 34 1 66 134 324 391 2.19e-18 81.3
MsG0580028418.01.T01 MTR_4g062500 35.211 142 75 5 36 165 382 518 2.47e-18 81.6
MsG0580028418.01.T01 MTR_7g092620 38.806 134 70 5 37 165 379 505 2.58e-18 81.6
MsG0580028418.01.T01 MTR_8g466180 42.708 96 54 1 66 161 404 498 3.33e-18 81.3
MsG0580028418.01.T01 MTR_1g090987 39.241 79 47 1 69 147 89 166 3.34e-18 77.8
MsG0580028418.01.T01 MTR_1g055325 46.269 67 35 1 66 132 421 486 9.64e-18 80.1
MsG0580028418.01.T01 MTR_8g016550 42.169 83 47 1 66 148 75 156 1.46e-17 75.5
MsG0580028418.01.T01 MTR_3g057170 42.169 83 47 1 66 148 86 167 1.66e-17 75.9
MsG0580028418.01.T01 MTR_8g468780 40.777 103 54 3 66 165 338 436 1.67e-17 79.3
MsG0580028418.01.T01 MTR_4g133760 43.956 91 45 1 78 162 296 386 1.88e-17 79.0
MsG0580028418.01.T01 MTR_6g008500 36.441 118 68 4 30 145 401 513 3.00e-17 78.6
MsG0580028418.01.T01 MTR_2g073480 46.269 67 35 1 66 132 316 381 3.68e-17 78.2
MsG0580028418.01.T01 MTR_2g073440 46.269 67 35 1 66 132 383 448 3.85e-17 78.2
MsG0580028418.01.T01 MTR_4g104550 38.235 102 61 2 62 162 391 491 4.21e-17 78.2
MsG0580028418.01.T01 MTR_1g091023 39.241 79 47 1 69 147 401 478 4.70e-17 77.8
MsG0580028418.01.T01 MTR_3g025250 38.462 104 59 2 66 165 175 277 7.88e-17 76.3
MsG0580028418.01.T01 MTR_1g091010 39.241 79 47 1 69 147 400 477 9.79e-17 77.0
MsG0580028418.01.T01 MTR_5g093960 39.241 79 47 1 69 147 115 192 1.27e-16 75.5
MsG0580028418.01.T01 MTR_4g088420 34.286 140 83 6 28 165 98 230 1.49e-16 74.7
MsG0580028418.01.T01 MTR_2g073420 43.284 67 37 1 66 132 411 476 1.76e-16 76.3
MsG0580028418.01.T01 MTR_0181s0030 38.614 101 56 3 66 164 403 499 1.82e-16 76.3
MsG0580028418.01.T01 MTR_0171s0010 40.816 98 52 3 66 161 411 504 1.87e-16 76.3
MsG0580028418.01.T01 MTR_1g091003 39.474 76 45 1 69 144 401 475 2.46e-16 75.9
MsG0580028418.01.T01 MTR_3g014880 34.783 138 83 4 30 165 392 524 3.15e-16 75.5
MsG0580028418.01.T01 MTR_8g469300 40.196 102 54 3 66 164 407 504 3.43e-16 75.5
MsG0580028418.01.T01 MTR_2g450040 34.091 132 80 4 36 165 388 514 4.31e-16 75.1
MsG0580028418.01.T01 MTR_1750s0010 38.372 86 51 2 29 114 68 151 4.54e-16 71.6
MsG0580028418.01.T01 MTR_6g008600 34.711 121 72 4 47 165 410 525 7.01e-16 74.7
MsG0580028418.01.T01 MTR_8g012590 34.483 116 69 4 52 165 389 499 7.16e-16 74.7
MsG0580028418.01.T01 MTR_6g022450 32.558 129 80 4 39 165 387 510 9.08e-16 74.3
MsG0580028418.01.T01 MTR_0171s0030 39.796 98 53 3 66 161 321 414 1.38e-15 73.6
MsG0580028418.01.T01 MTR_3g020780 40.385 104 56 3 66 165 410 511 1.47e-15 73.6
MsG0580028418.01.T01 MTR_6g008430 34.074 135 76 5 37 163 391 520 2.34e-15 73.2
MsG0580028418.01.T01 MTR_6g008650 34.328 134 75 5 37 165 398 523 3.39e-15 72.8
MsG0580028418.01.T01 MTR_6g008620 33.333 126 77 4 37 160 398 518 3.59e-15 72.4
MsG0580028418.01.T01 MTR_8g036185 35.455 110 60 3 62 161 407 515 3.79e-15 72.4
MsG0580028418.01.T01 MTR_6g008640 40.594 101 54 3 67 165 425 521 4.87e-15 72.0
MsG0580028418.01.T01 MTR_6g008530 34.400 125 74 5 36 157 400 519 5.18e-15 72.0
MsG0580028418.01.T01 MTR_2g097840 45.588 68 37 0 95 162 63 130 1.17e-14 67.4
MsG0580028418.01.T01 MTR_7g092600 36.522 115 56 4 30 132 371 480 1.36e-14 70.9
MsG0580028418.01.T01 MTR_4g018800 33.083 133 81 5 36 165 396 523 1.59e-14 70.9
MsG0580028418.01.T01 MTR_1g031710 32.353 102 62 3 62 161 206 302 3.72e-14 68.9
MsG0580028418.01.T01 MTR_4g094775 41.584 101 50 3 66 166 401 492 5.23e-14 69.3
MsG0580028418.01.T01 MTR_6g042540 39.362 94 53 3 37 128 391 482 7.07e-14 68.9
MsG0580028418.01.T01 MTR_4g088400 35.606 132 72 5 39 165 395 518 8.26e-14 68.6
MsG0580028418.01.T01 MTR_4g088425 34.884 129 77 5 39 165 379 502 8.68e-14 68.6
MsG0580028418.01.T01 MTR_5g018500 40.741 81 40 3 66 144 95 169 9.36e-14 66.6
MsG0580028418.01.T01 MTR_4g088195 31.250 144 78 5 37 164 374 512 1.05e-13 68.2
MsG0580028418.01.T01 MTR_4g088405 39.785 93 52 3 39 129 309 399 1.25e-13 68.2
MsG0580028418.01.T01 MTR_5g045250 46.875 64 33 1 67 130 424 486 1.33e-13 68.2
MsG0580028418.01.T01 MTR_6g008630 34.127 126 76 5 37 160 308 428 2.32e-13 67.4
MsG0580028418.01.T01 MTR_5g094670 38.636 88 51 1 77 164 182 266 3.26e-13 65.9
MsG0580028418.01.T01 MTR_8g027040 44.444 72 36 3 66 135 448 517 3.55e-13 67.0
MsG0580028418.01.T01 MTR_4g095050 38.384 99 52 3 66 164 405 494 5.63e-13 66.2
MsG0580028418.01.T01 MTR_4g088170 30.137 146 79 5 37 164 374 514 6.87e-13 65.9
MsG0580028418.01.T01 MTR_5g016440 40.426 94 49 3 66 159 396 482 7.37e-13 65.9
MsG0580028418.01.T01 MTR_6g042610 38.298 94 54 3 37 128 392 483 7.49e-13 65.9
MsG0580028418.01.T01 MTR_1g111240 34.074 135 77 4 29 156 399 528 7.98e-13 65.9
MsG0580028418.01.T01 MTR_7g075570 32.979 94 48 2 66 159 139 217 8.88e-13 64.7
MsG0580028418.01.T01 MTR_7g087520 29.808 104 68 2 66 165 413 515 1.05e-12 65.5
MsG0580028418.01.T01 MTR_1g097220 47.059 68 31 2 67 130 431 497 1.20e-12 65.5
MsG0580028418.01.T01 MTR_4g088160 29.167 144 81 5 37 164 374 512 1.48e-12 65.1
MsG0580028418.01.T01 MTR_7g056103 36.275 102 57 3 66 161 405 504 2.20e-12 64.7
MsG0580028418.01.T01 MTR_8g098565 37.755 98 58 3 66 161 409 505 2.21e-12 64.7
MsG0580028418.01.T01 MTR_8g012585 34.375 96 58 3 37 129 324 417 2.78e-12 64.3
MsG0580028418.01.T01 MTR_8g080520 40.789 76 41 2 67 139 433 507 2.79e-12 64.3
MsG0580028418.01.T01 MTR_4g094772 40.000 100 50 4 66 164 392 482 3.94e-12 63.9
MsG0580028418.01.T01 MTR_2g010320 37.624 101 57 4 67 165 408 504 4.20e-12 63.5
MsG0580028418.01.T01 MTR_2g010300 47.826 69 33 3 67 133 394 461 5.29e-12 63.5
MsG0580028418.01.T01 MTR_5g016410 37.374 99 53 3 66 164 401 490 7.72e-12 62.8
MsG0580028418.01.T01 MTR_4g062530 31.481 108 63 3 67 164 328 434 1.02e-11 62.4
MsG0580028418.01.T01 MTR_2g010250 46.377 69 34 3 67 133 410 477 1.11e-11 62.4
MsG0580028418.01.T01 MTR_2g010380 46.377 69 34 3 67 133 414 481 1.45e-11 62.0
MsG0580028418.01.T01 MTR_2g437840 35.802 81 43 2 66 146 401 472 1.61e-11 62.0
MsG0580028418.01.T01 MTR_2g010330 46.377 69 34 3 67 133 412 479 1.82e-11 62.0
MsG0580028418.01.T01 MTR_4g035330 37.864 103 57 3 29 131 353 448 2.59e-11 61.2
MsG0580028418.01.T01 MTR_4g077210 34.109 129 75 5 42 166 379 501 5.67e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580028418.01.T01 AT2G45570 48.958 96 48 1 66 161 411 505 3.60e-30 115
MsG0580028418.01.T01 AT2G45560 47.917 96 49 1 66 161 410 504 4.82e-30 114
MsG0580028418.01.T01 AT2G45550 48.958 96 48 1 66 161 410 504 1.50e-29 113
MsG0580028418.01.T01 AT2G45580 47.917 96 49 1 66 161 257 351 5.29e-29 110
MsG0580028418.01.T01 AT2G45580 47.917 96 49 1 66 161 411 505 2.15e-28 110
MsG0580028418.01.T01 AT1G33720 45.833 96 51 1 66 161 278 372 2.18e-27 105
MsG0580028418.01.T01 AT1G33720 45.833 96 51 1 66 161 278 372 2.18e-27 105
MsG0580028418.01.T01 AT1G33720 45.833 96 51 1 66 161 278 372 2.18e-27 105
MsG0580028418.01.T01 AT1G33720 45.833 96 51 1 66 161 303 397 3.76e-27 105
MsG0580028418.01.T01 AT1G33730 47.872 94 48 1 66 159 274 366 7.58e-27 104
MsG0580028418.01.T01 AT1G33730 47.872 94 48 1 66 159 274 366 7.58e-27 104
MsG0580028418.01.T01 AT1G33720 45.833 96 51 1 66 161 410 504 9.05e-27 105
MsG0580028418.01.T01 AT4G36220 39.370 127 74 3 41 166 393 517 4.77e-26 103
MsG0580028418.01.T01 AT3G61040 45.833 96 51 1 66 161 399 493 1.01e-25 102
MsG0580028418.01.T01 AT4G13770 35.200 125 80 1 37 161 373 496 1.35e-24 99.4
MsG0580028418.01.T01 AT5G35715 35.714 126 79 2 37 162 311 434 1.57e-23 96.3
MsG0580028418.01.T01 AT4G31500 40.404 99 57 1 66 162 398 496 1.59e-23 96.3
MsG0580028418.01.T01 AT3G53300 34.127 126 81 2 37 162 373 496 2.32e-23 95.9
MsG0580028418.01.T01 AT5G57260 38.614 101 61 1 66 166 403 502 7.12e-23 94.7
MsG0580028418.01.T01 AT3G26190 33.600 125 81 2 37 161 373 495 8.85e-23 94.4
MsG0580028418.01.T01 AT5G04330 37.209 129 78 3 39 166 380 506 1.41e-22 94.0
MsG0580028418.01.T01 AT5G07990 38.760 129 73 3 41 165 377 503 1.17e-21 91.3
MsG0580028418.01.T01 AT3G26210 38.384 99 60 1 66 164 403 500 1.86e-21 90.5
MsG0580028418.01.T01 AT1G11610 35.246 122 78 1 41 162 374 494 2.76e-21 90.1
MsG0580028418.01.T01 AT3G53290 34.677 124 79 2 39 162 282 403 3.60e-21 89.4
MsG0580028418.01.T01 AT3G48310 42.268 97 56 0 66 162 391 487 6.92e-21 89.0
MsG0580028418.01.T01 AT3G48320 40.206 97 58 0 66 162 391 487 1.24e-20 88.2
MsG0580028418.01.T01 AT5G25130 38.542 96 58 1 66 161 396 490 1.37e-20 88.2
MsG0580028418.01.T01 AT2G30750 35.246 122 78 1 41 162 374 494 1.67e-20 87.8
MsG0580028418.01.T01 AT5G25120 38.542 96 58 1 66 161 396 490 1.69e-20 87.8
MsG0580028418.01.T01 AT5G25140 39.583 96 57 1 66 161 396 490 1.81e-20 87.8
MsG0580028418.01.T01 AT3G48280 41.237 97 57 0 66 162 390 486 1.82e-20 87.8
MsG0580028418.01.T01 AT3G26270 43.750 96 51 2 66 161 405 497 2.01e-20 87.8
MsG0580028418.01.T01 AT1G13080 38.384 99 60 1 66 164 286 383 2.03e-20 87.0
MsG0580028418.01.T01 AT1G11610 33.065 124 82 1 41 164 374 496 2.08e-20 87.8
MsG0580028418.01.T01 AT3G26180 37.500 96 59 1 66 161 270 364 2.09e-20 87.0
MsG0580028418.01.T01 AT3G48270 42.268 97 56 0 66 162 390 486 2.14e-20 87.4
MsG0580028418.01.T01 AT5G25180 38.542 96 58 1 66 161 396 490 2.15e-20 87.4
MsG0580028418.01.T01 AT3G26160 40.625 96 56 1 66 161 404 498 3.03e-20 87.0
MsG0580028418.01.T01 AT1G13110 34.862 109 67 2 56 161 393 500 3.25e-20 87.0
MsG0580028418.01.T01 AT1G13080 38.384 99 60 1 66 164 404 501 3.34e-20 87.0
MsG0580028418.01.T01 AT3G53280 30.645 124 84 2 39 162 373 494 4.44e-20 86.7
MsG0580028418.01.T01 AT3G26280 40.000 100 57 2 66 165 423 519 4.92e-20 86.7
MsG0580028418.01.T01 AT3G48290 40.206 97 58 0 66 162 392 488 4.94e-20 86.7
MsG0580028418.01.T01 AT3G26280 40.000 100 57 2 66 165 406 502 5.14e-20 86.7
MsG0580028418.01.T01 AT3G48290 40.206 97 58 0 66 162 418 514 5.64e-20 86.3
MsG0580028418.01.T01 AT3G26200 31.746 126 84 2 37 162 373 496 6.08e-20 86.3
MsG0580028418.01.T01 AT3G26180 37.500 96 59 1 66 161 404 498 6.72e-20 86.3
MsG0580028418.01.T01 AT3G26330 37.500 96 59 1 66 161 400 494 7.17e-20 86.3
MsG0580028418.01.T01 AT4G12320 40.310 129 71 4 38 165 388 511 8.19e-20 85.9
MsG0580028418.01.T01 AT3G26300 35.052 97 62 1 66 162 400 495 1.57e-19 85.1
MsG0580028418.01.T01 AT3G26230 42.708 96 52 2 66 161 402 494 1.70e-19 85.1
MsG0580028418.01.T01 AT3G26310 35.354 99 63 1 66 164 399 496 1.75e-19 85.1
MsG0580028418.01.T01 AT2G40890 33.588 131 85 2 38 168 371 499 1.97e-19 84.7
MsG0580028418.01.T01 AT3G26320 34.375 96 62 1 66 161 400 494 2.99e-19 84.3
MsG0580028418.01.T01 AT4G12310 39.535 129 72 4 38 165 390 513 3.12e-19 84.3
MsG0580028418.01.T01 AT3G26150 38.542 96 58 1 66 161 404 498 3.30e-19 84.3
MsG0580028418.01.T01 AT3G26220 40.625 96 54 2 66 161 405 497 5.67e-19 83.6
MsG0580028418.01.T01 AT3G26170 36.458 96 60 1 66 161 404 498 5.73e-19 83.6
MsG0580028418.01.T01 AT5G24950 34.188 117 76 1 46 162 379 494 7.68e-19 83.2
MsG0580028418.01.T01 AT2G02580 32.456 114 71 2 53 161 382 494 7.87e-19 83.2
MsG0580028418.01.T01 AT3G44250 37.113 97 60 1 66 162 400 495 8.66e-19 83.2
MsG0580028418.01.T01 AT2G24180 32.331 133 83 3 29 161 370 495 1.06e-18 82.8
MsG0580028418.01.T01 AT4G22690 38.806 134 76 4 38 171 427 554 1.57e-18 82.4
MsG0580028418.01.T01 AT4G22710 38.806 134 76 4 38 171 396 523 1.59e-18 82.4
MsG0580028418.01.T01 AT4G12300 38.281 128 73 4 38 164 386 508 1.63e-18 82.4
MsG0580028418.01.T01 AT5G24960 33.607 122 80 1 41 162 375 495 2.68e-18 81.6
MsG0580028418.01.T01 AT4G13310 38.144 97 60 0 66 162 399 495 5.13e-18 80.9
MsG0580028418.01.T01 AT2G30770 33.607 122 80 1 41 162 374 494 6.16e-18 80.5
MsG0580028418.01.T01 AT3G26290 34.375 96 62 1 66 161 400 494 1.00e-17 80.1
MsG0580028418.01.T01 AT3G26290 34.375 96 62 1 66 161 413 507 1.21e-17 79.7
MsG0580028418.01.T01 AT3G48300 41.237 97 53 2 66 162 388 480 1.31e-17 79.7
MsG0580028418.01.T01 AT3G48300 41.237 97 53 2 66 162 390 482 1.32e-17 79.7
MsG0580028418.01.T01 AT1G74550 40.000 100 57 2 66 165 385 481 1.60e-17 79.3
MsG0580028418.01.T01 AT4G13290 39.394 99 56 2 66 162 392 488 2.09e-17 79.0
MsG0580028418.01.T01 AT3G52970 38.776 98 57 2 66 161 414 510 2.16e-17 79.0
MsG0580028418.01.T01 AT3G52970 38.776 98 57 2 66 161 428 524 2.43e-17 79.0
MsG0580028418.01.T01 AT2G25160 40.426 94 50 3 66 157 416 505 2.72e-17 78.6
MsG0580028418.01.T01 AT5G44620 34.109 129 80 3 37 165 389 512 4.25e-17 78.2
MsG0580028418.01.T01 AT3G53305 30.275 109 69 2 37 145 211 312 1.05e-16 76.3
MsG0580028418.01.T01 AT1G13100 32.990 97 63 2 37 133 372 466 1.12e-16 77.0
MsG0580028418.01.T01 AT1G13090 34.021 97 62 2 37 133 372 466 2.77e-16 75.9
MsG0580028418.01.T01 AT4G12330 37.000 100 59 2 66 165 416 511 4.91e-16 75.1
MsG0580028418.01.T01 AT4G31940 34.091 132 79 4 37 165 392 518 7.74e-16 74.7
MsG0580028418.01.T01 AT3G26830 41.791 67 38 1 66 132 400 465 1.04e-15 74.3
MsG0580028418.01.T01 AT4G31970 34.091 132 79 4 37 165 391 517 1.70e-15 73.6
MsG0580028418.01.T01 AT3G32047 36.283 113 63 4 36 145 379 485 3.17e-15 72.8
MsG0580028418.01.T01 AT4G20235 35.294 102 59 1 38 132 229 330 7.84e-15 71.2
MsG0580028418.01.T01 AT3G25180 31.618 136 88 3 30 165 377 507 1.02e-14 71.2
MsG0580028418.01.T01 AT4G31950 34.091 132 79 4 37 165 380 506 1.19e-14 71.2
MsG0580028418.01.T01 AT2G18410 66.667 51 17 0 1 51 284 334 1.84e-14 70.5
MsG0580028418.01.T01 AT2G14100 31.343 134 82 5 36 165 381 508 3.37e-14 69.7
MsG0580028418.01.T01 AT1G74540 39.759 83 47 2 66 148 391 470 4.74e-14 69.3
MsG0580028418.01.T01 AT5G42590 33.696 92 60 1 41 132 374 464 1.07e-13 68.6
MsG0580028418.01.T01 AT1G01190 34.234 111 67 3 36 142 403 511 1.42e-13 68.2
MsG0580028418.01.T01 AT1G01190 34.234 111 67 3 36 142 408 516 1.51e-13 67.8
MsG0580028418.01.T01 AT2G42250 28.369 141 85 5 29 161 375 507 1.91e-13 67.8
MsG0580028418.01.T01 AT3G20140 37.736 106 59 4 61 164 404 504 3.13e-13 67.0
MsG0580028418.01.T01 AT3G61880 40.206 97 51 3 67 159 431 524 3.42e-13 67.0
MsG0580028418.01.T01 AT3G61880 40.206 97 51 3 67 159 431 524 5.58e-13 66.2
MsG0580028418.01.T01 AT3G20935 36.697 109 58 4 62 164 231 334 5.80e-13 65.9
MsG0580028418.01.T01 AT4G15350 35.294 102 52 4 62 156 399 493 7.93e-13 65.9
MsG0580028418.01.T01 AT5G47990 36.111 108 59 4 62 164 405 507 9.08e-13 65.9
MsG0580028418.01.T01 AT3G20130 37.500 112 55 5 61 164 376 480 1.47e-12 65.1
MsG0580028418.01.T01 AT3G20940 36.364 110 59 4 61 164 405 509 1.67e-12 65.1
MsG0580028418.01.T01 AT3G20130 37.500 112 55 5 61 164 404 508 2.02e-12 64.7
MsG0580028418.01.T01 AT3G28740 38.000 100 52 4 66 164 407 497 4.32e-12 63.5
MsG0580028418.01.T01 AT2G23190 45.455 66 30 2 66 131 443 502 4.79e-12 63.5
MsG0580028418.01.T01 AT5G36220 36.364 99 54 4 66 164 259 348 1.02e-11 62.4
MsG0580028418.01.T01 AT2G27010 34.000 100 56 3 62 156 381 475 1.22e-11 62.4
MsG0580028418.01.T01 AT1G64950 32.061 131 78 5 36 160 378 503 1.32e-11 62.4
MsG0580028418.01.T01 AT5G10610 35.417 96 56 3 66 161 398 487 1.40e-11 62.4
MsG0580028418.01.T01 AT1G01280 31.776 107 62 4 66 167 406 506 1.46e-11 62.4
MsG0580028418.01.T01 AT4G37320 34.653 101 57 3 66 166 399 490 1.55e-11 62.0
MsG0580028418.01.T01 AT4G37330 37.864 103 55 3 66 168 396 489 1.96e-11 62.0
MsG0580028418.01.T01 AT5G36220 36.364 99 54 4 66 164 405 494 2.34e-11 61.6
MsG0580028418.01.T01 AT2G23220 36.264 91 51 3 41 131 390 473 2.72e-11 61.2
MsG0580028418.01.T01 AT5G10600 35.789 95 55 3 66 160 414 502 3.36e-11 61.2
MsG0580028418.01.T01 AT2G30490 40.860 93 49 4 67 156 406 495 3.93e-11 60.8
MsG0580028418.01.T01 AT1G64940 31.298 131 79 5 36 160 379 504 3.98e-11 60.8
MsG0580028418.01.T01 AT2G12190 32.117 137 80 6 36 164 378 509 4.78e-11 60.8
MsG0580028418.01.T01 AT1G13710 37.681 69 42 1 62 130 415 482 5.12e-11 60.5
MsG0580028418.01.T01 AT1G64930 33.083 133 76 6 36 160 377 504 7.77e-11 60.1
MsG0580028418.01.T01 AT3G20090 36.170 94 47 4 61 148 268 354 9.30e-11 59.7
MsG0580028418.01.T01 AT4G37430 32.632 95 59 3 66 160 399 488 9.91e-11 59.7

Find 39 sgRNAs with CRISPR-Local

Find 118 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGAACATGGATGAGAAATT+TGG 0.155423 5:+80284113 MsG0580028418.01.T01:CDS
TTTCTCATCCATGTTCAAAT+TGG 0.241469 5:-80284108 None:intergenic
AATTGGCTTTGAGGACTATT+AGG 0.262143 5:+80284024 MsG0580028418.01.T01:CDS
CTGGGATTCAATTGGCTTTG+AGG 0.298894 5:+80284015 MsG0580028418.01.T01:CDS
CCTCACTGCTGCTCTCTTCA+AGG 0.319817 5:-80282587 None:intergenic
TTGGAAGGACTAATATTATA+TGG 0.326597 5:-80284089 None:intergenic
TAGGTTAGTTATAGCTCAAT+TGG 0.357176 5:+80284043 MsG0580028418.01.T01:CDS
TTTGGTCGTAGGCGTTGTCC+TGG 0.385696 5:+80283996 MsG0580028418.01.T01:CDS
CGCAATACCAAGTTATCGTT+TGG 0.396231 5:+80284166 MsG0580028418.01.T01:CDS
CGGAGAAGGAGCAAGTTGAT+AGG 0.401470 5:+80282409 MsG0580028417.01.T01:CDS
AGTTTGAAAGTATACCATTT+GGG 0.422225 5:+80283973 MsG0580028418.01.T01:CDS
GAGTTTGAAAGTATACCATT+TGG 0.426345 5:+80283972 MsG0580028418.01.T01:CDS
GAAAGTATACCATTTGGGTT+TGG 0.426894 5:+80283978 MsG0580028418.01.T01:CDS
TTCTTGTTAATAAACCTCTC+TGG 0.438822 5:-80283930 None:intergenic
ATCATACCTTGGTGTTCAAA+AGG 0.453627 5:-80282447 None:intergenic
CCTCTCTGGATAAAATTCTT+CGG 0.467634 5:-80283916 None:intergenic
CTACCATCATAAATTTGAAT+CGG 0.477609 5:-80282558 None:intergenic
CGCCTACGACCAAACCCAAA+TGG 0.478118 5:-80283987 None:intergenic
CTTGAAGAGAGCAGCAGTGA+GGG 0.479698 5:+80282588 MsG0580028417.01.T01:exon
CTTGCTCCTTCTCCGACAGC+TGG 0.481450 5:-80282401 None:intergenic
GCGTTGTCCTGGGATTCAAT+TGG 0.483242 5:+80284007 MsG0580028418.01.T01:CDS
CTCACTGCTGCTCTCTTCAA+GGG 0.486177 5:-80282586 None:intergenic
GCACCGATTCAAATTTATGA+TGG 0.500504 5:+80282555 MsG0580028417.01.T01:exon
TCATCCATGTTCAAATTGGA+AGG 0.505012 5:-80284104 None:intergenic
CTCAAAGCCAATTGAATCCC+AGG 0.506780 5:-80284014 None:intergenic
TCACCTACCAAACGATAACT+TGG 0.506849 5:-80284173 None:intergenic
TTGAAGAGAGCAGCAGTGAG+GGG 0.511953 5:+80282589 MsG0580028417.01.T01:exon
CAATCTCCAGCTGTCGGAGA+AGG 0.518414 5:+80282395 MsG0580028417.01.T01:CDS
TTGGTCGTAGGCGTTGTCCT+GGG 0.522110 5:+80283997 MsG0580028418.01.T01:CDS
TACCATTTGGGTTTGGTCGT+AGG 0.530720 5:+80283985 MsG0580028418.01.T01:CDS
AGTTATCGTTTGGTAGGTGA+TGG 0.538808 5:+80284176 MsG0580028418.01.T01:CDS
GGAGAAGGAGCAAGTTGATA+GGG 0.569101 5:+80282410 MsG0580028417.01.T01:CDS
TGAAGAGAGCAGCAGTGAGG+GGG 0.579393 5:+80282590 MsG0580028417.01.T01:exon
ATACCAAGTTATCGTTTGGT+AGG 0.579460 5:+80284170 MsG0580028418.01.T01:CDS
TAGTCCTTCCAATTTGAACA+TGG 0.584924 5:+80284100 MsG0580028418.01.T01:CDS
GGAGCAAGTTGATAGGGCAA+AGG 0.602173 5:+80282416 MsG0580028417.01.T01:CDS
ACAATTCAATCTCCAGCTGT+CGG 0.612927 5:+80282389 MsG0580028417.01.T01:CDS
AACAAGAAAATGAATTACGA+AGG 0.635674 5:+80283945 MsG0580028418.01.T01:CDS
CCTTGAAGAGAGCAGCAGTG+AGG 0.653081 5:+80282587 MsG0580028417.01.T01:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTAAAACATAATTG+AGG - Chr5:80283867-80283886 None:intergenic 10.0%
!! AAAATTAATTTCTTCAAAAT+TGG - Chr5:80283081-80283100 None:intergenic 10.0%
!! AAATTAATTTCTTCAAAATT+GGG - Chr5:80283080-80283099 None:intergenic 10.0%
!!! ATATAATTAAGTTGAAATTT+TGG + Chr5:80283266-80283285 MsG0580028417.01.T01:exon 10.0%
!!! TGAAGAAATTAATTTTTTTT+GGG + Chr5:80283085-80283104 MsG0580028417.01.T01:exon 10.0%
!!! TTGAAGAAATTAATTTTTTT+TGG + Chr5:80283084-80283103 MsG0580028417.01.T01:exon 10.0%
!!! AAATCATAGAAATCAATTTT+AGG - Chr5:80283509-80283528 None:intergenic 15.0%
!!! GAAGAAATTAATTTTTTTTG+GGG + Chr5:80283086-80283105 MsG0580028417.01.T01:exon 15.0%
!! AAAATATATAATCTCACCTA+GGG - Chr5:80282649-80282668 None:intergenic 20.0%
!! ATATATCTAAATCATCATCT+GGG - Chr5:80282710-80282729 None:intergenic 20.0%
!!! AATTGGTGCATTATTTTAAT+TGG + Chr5:80284060-80284079 MsG0580028418.01.T01:CDS 20.0%
! AACAAGAAAATGAATTACGA+AGG + Chr5:80283945-80283964 MsG0580028418.01.T01:CDS 25.0%
! ACAAACGATTATACCAAAAT+TGG + Chr5:80283823-80283842 MsG0580028418.01.T01:intron 25.0%
! CATATATCTAAATCATCATC+TGG - Chr5:80282711-80282730 None:intergenic 25.0%
! CTACCATCATAAATTTGAAT+CGG - Chr5:80282561-80282580 None:intergenic 25.0%
! GAAAATATATAATCTCACCT+AGG - Chr5:80282650-80282669 None:intergenic 25.0%
! TACAAATCTATATCATACCT+TGG - Chr5:80282461-80282480 None:intergenic 25.0%
! TTGGAAGGACTAATATTATA+TGG - Chr5:80284092-80284111 None:intergenic 25.0%
!! AGTTTGAAAGTATACCATTT+GGG + Chr5:80283973-80283992 MsG0580028418.01.T01:CDS 25.0%
!! CTTATTAAACTCTTCTCTTT+TGG + Chr5:80283136-80283155 MsG0580028417.01.T01:exon 25.0%
!!! TCAATTTTAGGTTTCTATGT+AGG - Chr5:80283497-80283516 None:intergenic 25.0%
CAGTTACATAGAGATAATAG+TGG - Chr5:80283561-80283580 None:intergenic 30.0%
GATGGAATAGAAATGACAAT+TGG - Chr5:80283630-80283649 None:intergenic 30.0%
GATTTAAACACCGTAAGAAA+TGG - Chr5:80282490-80282509 None:intergenic 30.0%
TCACTCAAATTGCTCAAAAT+CGG - Chr5:80282917-80282936 None:intergenic 30.0%
TGTATTTGAGCCATTTCTTA+CGG + Chr5:80282477-80282496 MsG0580028417.01.T01:intron 30.0%
TTAGTGTCTTCTGTATTTCT+AGG + Chr5:80282743-80282762 MsG0580028417.01.T01:exon 30.0%
TTCTTGTTAATAAACCTCTC+TGG - Chr5:80283933-80283952 None:intergenic 30.0%
TTGAACATGGATGAGAAATT+TGG + Chr5:80284113-80284132 MsG0580028418.01.T01:CDS 30.0%
TTTCTCATCCATGTTCAAAT+TGG - Chr5:80284111-80284130 None:intergenic 30.0%
! AACATTGGCTAATCAATATC+GGG - Chr5:80282820-80282839 None:intergenic 30.0%
! ATTTCTAGGTGACTTAGATT+AGG + Chr5:80282757-80282776 MsG0580028417.01.T01:intron 30.0%
! CAACATTGGCTAATCAATAT+CGG - Chr5:80282821-80282840 None:intergenic 30.0%
! GAGTTTGAAAGTATACCATT+TGG + Chr5:80283972-80283991 MsG0580028418.01.T01:CDS 30.0%
! TAGGTTAGTTATAGCTCAAT+TGG + Chr5:80284043-80284062 MsG0580028418.01.T01:CDS 30.0%
!! TTTTGGTAGTTTTTGTGTGT+GGG + Chr5:80283153-80283172 MsG0580028417.01.T01:exon 30.0%
ACCTCTTTCAAAGGGTAAAA+AGG + Chr5:80282614-80282633 MsG0580028417.01.T01:exon 35.0%
ACGAGCATGACAATTCATTA+TGG + Chr5:80283223-80283242 MsG0580028417.01.T01:exon 35.0%
ATACCAAGTTATCGTTTGGT+AGG + Chr5:80284170-80284189 MsG0580028418.01.T01:CDS 35.0%
ATGTAGGCTGTACAATATGA+TGG - Chr5:80283481-80283500 None:intergenic 35.0%
CCTCTCTGGATAAAATTCTT+CGG - Chr5:80283919-80283938 None:intergenic 35.0%
CGATTATACCAAAATTGGAC+AGG + Chr5:80283828-80283847 MsG0580028418.01.T01:intron 35.0%
CGCAATGACATAAACTTCTA+CGG - Chr5:80283668-80283687 None:intergenic 35.0%
GAACACAAGATTGTCAAACT+TGG - Chr5:80283430-80283449 None:intergenic 35.0%
GACAATTCATTATGGCGATT+TGG + Chr5:80283231-80283250 MsG0580028417.01.T01:exon 35.0%
GAGTCAAATCGCTCAAAATA+GGG - Chr5:80282873-80282892 None:intergenic 35.0%
GGTGAAATTGGGTAAAATTG+AGG + Chr5:80283012-80283031 MsG0580028417.01.T01:intron 35.0%
TAGAAGTTTATGTCATTGCG+TGG + Chr5:80283668-80283687 MsG0580028418.01.T01:intron 35.0%
TAGTCCTTCCAATTTGAACA+TGG + Chr5:80284100-80284119 MsG0580028418.01.T01:CDS 35.0%
TCACTCAAATCGCTCAAAAT+CGG - Chr5:80282954-80282973 None:intergenic 35.0%
TCATCCATGTTCAAATTGGA+AGG - Chr5:80284107-80284126 None:intergenic 35.0%
TCTTTCAAAGGGTAAAAAGG+AGG + Chr5:80282617-80282636 MsG0580028417.01.T01:exon 35.0%
TTGAGCGATTTGAGTGAAAT+CGG + Chr5:80282957-80282976 MsG0580028417.01.T01:intron 35.0%
! ATAAACTCGTTTTGCCTAGA+TGG - Chr5:80283399-80283418 None:intergenic 35.0%
! GAAAGTATACCATTTGGGTT+TGG + Chr5:80283978-80283997 MsG0580028418.01.T01:CDS 35.0%
! GCATTTTCTGACCAAACATT+CGG - Chr5:80283897-80283916 None:intergenic 35.0%
! TAAGTTTTCAGTTATCTGCC+TGG - Chr5:80283752-80283771 None:intergenic 35.0%
! TGCTTAAGCTCTTCTCTTTT+AGG + Chr5:80282525-80282544 MsG0580028417.01.T01:intron 35.0%
! TTTACAAGTCGATTCCATCT+AGG + Chr5:80283382-80283401 MsG0580028418.01.T01:intron 35.0%
! TTTTGCTACCTGTCCAATTT+TGG - Chr5:80283839-80283858 None:intergenic 35.0%
!! AATTGGCTTTGAGGACTATT+AGG + Chr5:80284024-80284043 MsG0580028418.01.T01:CDS 35.0%
!! ACATGCGATTTTGACAACAT+TGG - Chr5:80282835-80282854 None:intergenic 35.0%
!! AGCTCTTCTCTTTTAGGAAA+TGG + Chr5:80282531-80282550 MsG0580028417.01.T01:intron 35.0%
!! ATCATACCTTGGTGTTCAAA+AGG - Chr5:80282450-80282469 None:intergenic 35.0%
!! ATTTTGAGTGATTTGACTCG+CGG + Chr5:80282991-80283010 MsG0580028417.01.T01:intron 35.0%
!! CTTTTGGTAGTTTTTGTGTG+TGG + Chr5:80283152-80283171 MsG0580028417.01.T01:exon 35.0%
!! GCACCGATTCAAATTTATGA+TGG + Chr5:80282555-80282574 MsG0580028417.01.T01:exon 35.0%
!! GTGTGGGTGTTTTTATGATT+CGG + Chr5:80283169-80283188 MsG0580028417.01.T01:exon 35.0%
!! TCCTTTTTACCCTTTGAAAG+AGG - Chr5:80282618-80282637 None:intergenic 35.0%
!! TTTTGAGAGATCCGAATGTT+TGG + Chr5:80283883-80283902 MsG0580028418.01.T01:CDS 35.0%
AACCAAACCTACTCATAACC+AGG + Chr5:80283702-80283721 MsG0580028418.01.T01:intron 40.0%
ACAATTCAATCTCCAGCTGT+CGG + Chr5:80282389-80282408 MsG0580028417.01.T01:CDS 40.0%
AGTTATCGTTTGGTAGGTGA+TGG + Chr5:80284176-80284195 MsG0580028418.01.T01:CDS 40.0%
CGAGTCAAATCGCTCAAAAT+AGG - Chr5:80282874-80282893 None:intergenic 40.0%
CGCAATACCAAGTTATCGTT+TGG + Chr5:80284166-80284185 MsG0580028418.01.T01:CDS 40.0%
GTCTATAACCTATCTTAGCG+CGG + Chr5:80283597-80283616 MsG0580028418.01.T01:intron 40.0%
TCACCTACCAAACGATAACT+TGG - Chr5:80284176-80284195 None:intergenic 40.0%
! AGGTGATGGCAAACTTGAAT+AGG + Chr5:80284190-80284209 MsG0580028418.01.T01:CDS 40.0%
! ATTTGACTCGCGGTGAAATT+GGG + Chr5:80283001-80283020 MsG0580028417.01.T01:intron 40.0%
! CCGAAGAATTTTATCCAGAG+AGG + Chr5:80283916-80283935 MsG0580028418.01.T01:CDS 40.0%
! GATTTGACTCGCGGTAAAAT+GGG + Chr5:80282883-80282902 MsG0580028417.01.T01:intron 40.0%
! GGTTATGAGTAGGTTTGGTT+TGG - Chr5:80283702-80283721 None:intergenic 40.0%
!! ATTTTGAGCGATTTGACTCG+CGG + Chr5:80282874-80282893 MsG0580028417.01.T01:intron 40.0%
CGGCGACAAAAACAGATAGA+TGG - Chr5:80283648-80283667 None:intergenic 45.0%
CTCAAAGCCAATTGAATCCC+AGG - Chr5:80284017-80284036 None:intergenic 45.0%
TCTGGGTCTTCATCAGAATC+TGG - Chr5:80282693-80282712 None:intergenic 45.0%
TGCCTGGTTATGAGTAGGTT+TGG - Chr5:80283707-80283726 None:intergenic 45.0%
TTCTCTGCCTGGTTATGAGT+AGG - Chr5:80283712-80283731 None:intergenic 45.0%
TTTCAGTTATCTGCCTGGCT+GGG - Chr5:80283747-80283766 None:intergenic 45.0%
! CGATTTGACTCGCGGTAAAA+TGG + Chr5:80282882-80282901 MsG0580028417.01.T01:intron 45.0%
! GATTTGACTCGCGGTGAAAT+TGG + Chr5:80283000-80283019 MsG0580028417.01.T01:intron 45.0%
! GTGCTTCCTTTTGAACACCA+AGG + Chr5:80282441-80282460 MsG0580028417.01.T01:CDS 45.0%
! TACCATTTGGGTTTGGTCGT+AGG + Chr5:80283985-80284004 MsG0580028418.01.T01:CDS 45.0%
! TTTTCAGTTATCTGCCTGGC+TGG - Chr5:80283748-80283767 None:intergenic 45.0%
!! CTGGGATTCAATTGGCTTTG+AGG + Chr5:80284015-80284034 MsG0580028418.01.T01:CDS 45.0%
!! GGAGAAGGAGCAAGTTGATA+GGG + Chr5:80282410-80282429 MsG0580028417.01.T01:CDS 45.0%
AAAAAGGAGGACTCAGCCCT+AGG + Chr5:80282630-80282649 MsG0580028417.01.T01:exon 50.0%
CTCACTGCTGCTCTCTTCAA+GGG - Chr5:80282589-80282608 None:intergenic 50.0%
CTTGAAGAGAGCAGCAGTGA+GGG + Chr5:80282588-80282607 MsG0580028417.01.T01:exon 50.0%
GCGTTGTCCTGGGATTCAAT+TGG + Chr5:80284007-80284026 MsG0580028418.01.T01:CDS 50.0%
GTCGATAACCGCGCTAAGAT+AGG - Chr5:80283608-80283627 None:intergenic 50.0%
TTGAAGAGAGCAGCAGTGAG+GGG + Chr5:80282589-80282608 MsG0580028417.01.T01:exon 50.0%
! GTAGGTTTGGTTTCTCTGCC+TGG - Chr5:80283723-80283742 None:intergenic 50.0%
!! CGGAGAAGGAGCAAGTTGAT+AGG + Chr5:80282409-80282428 MsG0580028417.01.T01:CDS 50.0%
!! GGAGCAAGTTGATAGGGCAA+AGG + Chr5:80282416-80282435 MsG0580028417.01.T01:CDS 50.0%
AACCAAACCTACTCCCAGCC+AGG + Chr5:80283731-80283750 MsG0580028418.01.T01:intron 55.0%
CAATCTCCAGCTGTCGGAGA+AGG + Chr5:80282395-80282414 MsG0580028417.01.T01:CDS 55.0%
CCTCACTGCTGCTCTCTTCA+AGG - Chr5:80282590-80282609 None:intergenic 55.0%
CCTTGAAGAGAGCAGCAGTG+AGG + Chr5:80282587-80282606 MsG0580028417.01.T01:exon 55.0%
CGCCTACGACCAAACCCAAA+TGG - Chr5:80283990-80284009 None:intergenic 55.0%
TGAAGAGAGCAGCAGTGAGG+GGG + Chr5:80282590-80282609 MsG0580028417.01.T01:exon 55.0%
TTATCTGCCTGGCTGGGAGT+AGG - Chr5:80283741-80283760 None:intergenic 55.0%
! TTGGTCGTAGGCGTTGTCCT+GGG + Chr5:80283997-80284016 MsG0580028418.01.T01:CDS 55.0%
! TTTGGTCGTAGGCGTTGTCC+TGG + Chr5:80283996-80284015 MsG0580028418.01.T01:CDS 55.0%
!! GAGGGGGCACCTCTTTCAAA+GGG + Chr5:80282606-80282625 MsG0580028417.01.T01:exon 55.0%
!! TGAGGGGGCACCTCTTTCAA+AGG + Chr5:80282605-80282624 MsG0580028417.01.T01:exon 55.0%
CTTGCTCCTTCTCCGACAGC+TGG - Chr5:80282404-80282423 None:intergenic 60.0%
TGCCTGGCTGGGAGTAGGTT+TGG - Chr5:80283736-80283755 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 80282387 80284211 80282387 ID=MsG0580028418.01;Name=MsG0580028418.01
Chr5 mRNA 80282387 80284211 80282387 ID=MsG0580028418.01.T01;Parent=MsG0580028418.01;Name=MsG0580028418.01.T01;_AED=0.62;_eAED=0.62;_QI=0|0|0|0.33|0|0|3|0|172
Chr5 exon 80282387 80282462 80282387 ID=MsG0580028418.01.T01:exon:7734;Parent=MsG0580028418.01.T01
Chr5 exon 80282547 80282627 80282547 ID=MsG0580028418.01.T01:exon:7735;Parent=MsG0580028418.01.T01
Chr5 exon 80283850 80284211 80283850 ID=MsG0580028418.01.T01:exon:7736;Parent=MsG0580028418.01.T01
Chr5 CDS 80282387 80282462 80282387 ID=MsG0580028418.01.T01:cds;Parent=MsG0580028418.01.T01
Chr5 CDS 80282547 80282627 80282547 ID=MsG0580028418.01.T01:cds;Parent=MsG0580028418.01.T01
Chr5 CDS 80283850 80284211 80283850 ID=MsG0580028418.01.T01:cds;Parent=MsG0580028418.01.T01
Gene Sequence

>MsG0580028418.01.T01

GTACAATTCAATCTCCAGCTGTCGGAGAAGGAGCAAGTTGATAGGGCAAAGGTTGTGCTTCCTTTTGAACACCAAGGAAATGGTGCACCGATTCAAATTTATGATGGTAGAAGATCCCTTGAAGAGAGCAGCAGTGAGGGGGCACCTCTTTCAAAGGGTAGCAAAATAAAACCTCAATTATGTTTTAATTTTTTGAGAGATCCGAATGTTTGGTCAGAAAATGCCGAAGAATTTTATCCAGAGAGGTTTATTAACAAGAAAATGAATTACGAAGGACAAGAGTTTGAAAGTATACCATTTGGGTTTGGTCGTAGGCGTTGTCCTGGGATTCAATTGGCTTTGAGGACTATTAGGTTAGTTATAGCTCAATTGGTGCATTATTTTAATTGGAAACTTCCATATAATATTAGTCCTTCCAATTTGAACATGGATGAGAAATTTGGACAATCTATACATAGAGCTCAACACTTGCACGCAATACCAAGTTATCGTTTGGTAGGTGATGGCAAACTTGAATAG

Protein sequence

>MsG0580028418.01.T01

VQFNLQLSEKEQVDRAKVVLPFEHQGNGAPIQIYDGRRSLEESSSEGAPLSKGSKIKPQLCFNFLRDPNVWSENAEEFYPERFINKKMNYEGQEFESIPFGFGRRRCPGIQLALRTIRLVIAQLVHYFNWKLPYNISPSNLNMDEKFGQSIHRAQHLHAIPSYRLVGDGKLE*