Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032996.01.T01 | PNX98321.1 | 65.333 | 75 | 26 | 0 | 1 | 75 | 422 | 496 | 1.10E-19 | 94 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032996.01.T01 | A0A2K3N5J8 | 65.333 | 75 | 26 | 0 | 1 | 75 | 422 | 496 | 5.24e-20 | 94.0 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0680032996.01 | 0.829483 | 5.019910e-55 | 5.144324e-52 |
| MsG0080047957.01 | MsG0680032996.01 | 0.811521 | 6.714533e-51 | 4.165624e-48 |
| MsG0080047959.01 | MsG0680032996.01 | 0.823577 | 1.285307e-53 | 1.111054e-50 |
| MsG0080048683.01 | MsG0680032996.01 | 0.821068 | 4.913063e-53 | 3.956549e-50 |
| MsG0080048874.01 | MsG0680032996.01 | 0.807254 | 5.529313e-50 | 3.065059e-47 |
| MsG0180000240.01 | MsG0680032996.01 | -0.813977 | 1.947571e-51 | 1.290523e-48 |
| MsG0180000271.01 | MsG0680032996.01 | 0.803039 | 4.215537e-49 | 2.096795e-46 |
| MsG0180000470.01 | MsG0680032996.01 | 0.853023 | 3.141388e-61 | 6.692936e-58 |
| MsG0180000526.01 | MsG0680032996.01 | 0.806423 | 8.287187e-50 | 4.496205e-47 |
| MsG0180000550.01 | MsG0680032996.01 | 0.819616 | 1.057452e-52 | 8.177616e-50 |
| MsG0180000650.01 | MsG0680032996.01 | 0.831691 | 1.445871e-55 | 1.580935e-52 |
| MsG0180000828.01 | MsG0680032996.01 | 0.808055 | 3.737299e-50 | 2.115397e-47 |
| MsG0180001063.01 | MsG0680032996.01 | 0.818258 | 2.152892e-52 | 1.603466e-49 |
| MsG0180001663.01 | MsG0680032996.01 | 0.827257 | 1.728506e-54 | 1.660045e-51 |
| MsG0180001712.01 | MsG0680032996.01 | 0.803496 | 3.390696e-49 | 1.706487e-46 |
| MsG0180001971.01 | MsG0680032996.01 | 0.814528 | 1.471413e-51 | 9.897366e-49 |
| MsG0180002089.01 | MsG0680032996.01 | 0.803252 | 3.809728e-49 | 1.905325e-46 |
| MsG0180002195.01 | MsG0680032996.01 | 0.816257 | 6.070177e-52 | 4.280217e-49 |
| MsG0180002482.01 | MsG0680032996.01 | 0.823578 | 1.284762e-53 | 1.110602e-50 |
| MsG0180002750.01 | MsG0680032996.01 | -0.801102 | 1.054793e-48 | 4.995144e-46 |
| MsG0180003669.01 | MsG0680032996.01 | 0.803782 | 2.957981e-49 | 1.499658e-46 |
| MsG0180003952.01 | MsG0680032996.01 | 0.833900 | 4.089533e-56 | 4.775788e-53 |
| MsG0180004264.01 | MsG0680032996.01 | 0.843997 | 9.929457e-59 | 1.581052e-55 |
| MsG0180004765.01 | MsG0680032996.01 | 0.828888 | 6.997317e-55 | 7.046056e-52 |
| MsG0180005279.01 | MsG0680032996.01 | 0.818355 | 2.047269e-52 | 1.529035e-49 |
| MsG0180006064.01 | MsG0680032996.01 | -0.828747 | 7.570155e-55 | 7.591680e-52 |
| MsG0180006144.01 | MsG0680032996.01 | 0.819889 | 9.160021e-53 | 7.138409e-50 |
| MsG0280011032.01 | MsG0680032996.01 | 0.807258 | 5.519669e-50 | 3.059997e-47 |
| MsG0280011059.01 | MsG0680032996.01 | -0.815144 | 1.074707e-51 | 7.349646e-49 |
| MsG0280011163.01 | MsG0680032996.01 | 0.828402 | 9.171287e-55 | 9.106660e-52 |
| MsG0280011376.01 | MsG0680032996.01 | 0.821047 | 4.969209e-53 | 3.999476e-50 |
| MsG0380011870.01 | MsG0680032996.01 | 0.830498 | 2.839781e-55 | 2.996973e-52 |
| MsG0380012005.01 | MsG0680032996.01 | 0.809962 | 1.459870e-50 | 8.691247e-48 |
| MsG0380012007.01 | MsG0680032996.01 | 0.811915 | 5.514621e-51 | 3.456741e-48 |
| MsG0380012394.01 | MsG0680032996.01 | 0.801715 | 7.900559e-49 | 3.799424e-46 |
| MsG0380013853.01 | MsG0680032996.01 | 0.835129 | 2.008650e-56 | 2.433381e-53 |
| MsG0380014573.01 | MsG0680032996.01 | 0.824049 | 9.964901e-54 | 8.728677e-51 |
| MsG0380014770.01 | MsG0680032996.01 | 0.814169 | 1.766907e-51 | 1.176930e-48 |
| MsG0380014866.01 | MsG0680032996.01 | 0.804098 | 2.542111e-49 | 1.299348e-46 |
| MsG0380014894.01 | MsG0680032996.01 | 0.825869 | 3.705140e-54 | 3.419130e-51 |
| MsG0380014902.01 | MsG0680032996.01 | 0.826067 | 3.325255e-54 | 3.085625e-51 |
| MsG0680030992.01 | MsG0680032996.01 | 0.829446 | 5.123444e-55 | 5.244835e-52 |
| MsG0680031355.01 | MsG0680032996.01 | 0.832957 | 7.026678e-56 | 7.976558e-53 |
| MsG0680031379.01 | MsG0680032996.01 | 0.800141 | 1.656519e-48 | 7.655334e-46 |
| MsG0680031459.01 | MsG0680032996.01 | 0.810571 | 1.078728e-50 | 6.525387e-48 |
| MsG0680031511.01 | MsG0680032996.01 | 0.804640 | 1.960197e-49 | 1.015954e-46 |
| MsG0680032058.01 | MsG0680032996.01 | 0.820057 | 8.384282e-53 | 6.564948e-50 |
| MsG0680032095.01 | MsG0680032996.01 | 0.816547 | 5.226706e-52 | 3.714474e-49 |
| MsG0680032204.01 | MsG0680032996.01 | 0.819641 | 1.043886e-52 | 8.078494e-50 |
| MsG0680032460.01 | MsG0680032996.01 | -0.817534 | 3.137915e-52 | 2.291179e-49 |
| MsG0680032641.01 | MsG0680032996.01 | 0.804056 | 2.593762e-49 | 1.324381e-46 |
| MsG0680032801.01 | MsG0680032996.01 | 0.809698 | 1.663865e-50 | 9.836964e-48 |
| MsG0680032996.01 | MsG0680032997.01 | 0.896722 | 2.808201e-76 | 3.075510e-72 |
| MsG0680032996.01 | MsG0680033228.01 | 0.819345 | 1.219204e-52 | 9.356848e-50 |
| MsG0680032996.01 | MsG0680033412.01 | 0.810002 | 1.430943e-50 | 8.528024e-48 |
| MsG0680032996.01 | MsG0680033792.01 | 0.802979 | 4.338238e-49 | 2.154472e-46 |
| MsG0680032996.01 | MsG0680034036.01 | 0.805229 | 1.476720e-49 | 7.770549e-47 |
| MsG0680032996.01 | MsG0680034782.01 | 0.807823 | 4.187096e-50 | 2.355593e-47 |
| MsG0680032996.01 | MsG0680035005.01 | 0.800131 | 1.664402e-48 | 7.689765e-46 |
| MsG0680032996.01 | MsG0680035444.01 | 0.818086 | 2.354713e-52 | 1.745460e-49 |
| MsG0680032996.01 | MsG0680035467.01 | 0.812097 | 5.031855e-51 | 3.170043e-48 |
| MsG0680032996.01 | MsG0680035844.01 | 0.816914 | 4.324853e-52 | 3.104716e-49 |
| MsG0680032996.01 | MsG0780035948.01 | 0.829643 | 4.588497e-55 | 4.724597e-52 |
| MsG0680032996.01 | MsG0780036128.01 | 0.815621 | 8.414742e-52 | 5.831387e-49 |
| MsG0680032996.01 | MsG0780036190.01 | 0.800650 | 1.304955e-48 | 6.109056e-46 |
| MsG0680032996.01 | MsG0780037082.01 | 0.803090 | 4.114627e-49 | 2.049175e-46 |
| MsG0680032996.01 | MsG0780037512.01 | 0.810613 | 1.056412e-50 | 6.397803e-48 |
| MsG0680032996.01 | MsG0780037859.01 | 0.814430 | 1.546786e-51 | 1.037684e-48 |
| MsG0680032996.01 | MsG0780038391.01 | 0.803119 | 4.057850e-49 | 2.022474e-46 |
| MsG0680032996.01 | MsG0780038401.01 | 0.800471 | 1.419125e-48 | 6.613180e-46 |
| MsG0680032996.01 | MsG0780038439.01 | 0.800583 | 1.346112e-48 | 6.291079e-46 |
| MsG0680032996.01 | MsG0780038827.01 | 0.804453 | 2.144759e-49 | 1.106238e-46 |
| MsG0680032996.01 | MsG0780038833.01 | 0.813751 | 2.184072e-51 | 1.438419e-48 |
| MsG0680032996.01 | MsG0780038906.01 | 0.812461 | 4.190684e-51 | 2.666291e-48 |
| MsG0680032996.01 | MsG0780039178.01 | 0.830097 | 3.556827e-55 | 3.710432e-52 |
| MsG0680032996.01 | MsG0780039867.01 | -0.812783 | 3.563850e-51 | 2.286485e-48 |
| MsG0680032996.01 | MsG0780040576.01 | -0.842391 | 2.661254e-58 | 4.029456e-55 |
| MsG0680032996.01 | MsG0780040596.01 | 0.854175 | 1.466125e-61 | 3.246736e-58 |
| MsG0680032996.01 | MsG0780040726.01 | 0.830075 | 3.601536e-55 | 3.754640e-52 |
| MsG0680032996.01 | MsG0780041441.01 | 0.838150 | 3.410784e-57 | 4.527879e-54 |
| MsG0680032996.01 | MsG0780041456.01 | 0.825562 | 4.381553e-54 | 4.007728e-51 |
| MsG0680032996.01 | MsG0780041475.01 | 0.808904 | 2.462920e-50 | 1.425470e-47 |
| MsG0680032996.01 | MsG0780041507.01 | 0.808248 | 3.399389e-50 | 1.934126e-47 |
| MsG0680032996.01 | MsG0880042053.01 | 0.805223 | 1.480643e-49 | 7.790079e-47 |
| MsG0680032996.01 | MsG0880042118.01 | 0.849050 | 4.146000e-60 | 7.762182e-57 |
| MsG0680032996.01 | MsG0880042161.01 | 0.820264 | 7.520965e-53 | 5.922245e-50 |
| MsG0680032996.01 | MsG0880042294.01 | 0.804034 | 2.621570e-49 | 1.337777e-46 |
| MsG0680032996.01 | MsG0880042301.01 | 0.820025 | 8.528369e-53 | 6.671868e-50 |
| MsG0680032996.01 | MsG0880042434.01 | 0.809640 | 1.712225e-50 | 1.010783e-47 |
| MsG0680032996.01 | MsG0880042611.01 | 0.836539 | 8.822262e-57 | 1.115085e-53 |
| MsG0680032996.01 | MsG0880042612.01 | 0.802928 | 4.444443e-49 | 2.204445e-46 |
| MsG0680032996.01 | MsG0880042656.01 | 0.819402 | 1.183802e-52 | 9.100325e-50 |
| MsG0680032996.01 | MsG0880042966.01 | 0.815578 | 8.602353e-52 | 5.953802e-49 |
| MsG0680032996.01 | MsG0880043172.01 | 0.813956 | 1.968447e-51 | 1.303639e-48 |
| MsG0680032996.01 | MsG0880043253.01 | 0.804150 | 2.480533e-49 | 1.269547e-46 |
| MsG0680032996.01 | MsG0880043292.01 | 0.814156 | 1.778502e-51 | 1.184245e-48 |
| MsG0680032996.01 | MsG0880043303.01 | 0.807842 | 4.147537e-50 | 2.334528e-47 |
| MsG0680032996.01 | MsG0880043509.01 | 0.802578 | 5.248522e-49 | 2.580132e-46 |
| MsG0680032996.01 | MsG0880043812.01 | 0.802502 | 5.442162e-49 | 2.670145e-46 |
| MsG0680032996.01 | MsG0880044079.01 | 0.801705 | 7.937595e-49 | 3.816268e-46 |
| MsG0680032996.01 | MsG0880044389.01 | -0.815637 | 8.347046e-52 | 5.786768e-49 |
| MsG0680032996.01 | MsG0880044573.01 | 0.818361 | 2.040975e-52 | 1.524600e-49 |
| MsG0680032996.01 | MsG0880044574.01 | 0.806096 | 9.709253e-50 | 5.224132e-47 |
| MsG0680032996.01 | MsG0880045765.01 | 0.820496 | 6.651402e-53 | 5.271332e-50 |
| MsG0680032996.01 | MsG0880045926.01 | 0.813276 | 2.777543e-51 | 1.805861e-48 |
| MsG0680032996.01 | MsG0880047608.01 | 0.814397 | 1.572904e-51 | 1.054292e-48 |
| MsG0480018603.01 | MsG0680032996.01 | 0.826963 | 2.032395e-54 | 1.935158e-51 |
| MsG0480018964.01 | MsG0680032996.01 | 0.821407 | 4.103697e-53 | 3.335696e-50 |
| MsG0480019337.01 | MsG0680032996.01 | 0.806373 | 8.490895e-50 | 4.600907e-47 |
| MsG0480019435.01 | MsG0680032996.01 | 0.820932 | 5.282166e-53 | 4.237443e-50 |
| MsG0480019730.01 | MsG0680032996.01 | 0.805651 | 1.204298e-49 | 6.406449e-47 |
| MsG0480019780.01 | MsG0680032996.01 | 0.801890 | 7.273052e-49 | 3.513517e-46 |
| MsG0480019795.01 | MsG0680032996.01 | 0.813549 | 2.419481e-51 | 1.584865e-48 |
| MsG0480020136.01 | MsG0680032996.01 | 0.811688 | 6.177206e-51 | 3.848850e-48 |
| MsG0480020839.01 | MsG0680032996.01 | 0.806058 | 9.889968e-50 | 5.316402e-47 |
| MsG0480020887.01 | MsG0680032996.01 | 0.820758 | 5.790347e-53 | 4.622526e-50 |
| MsG0480021536.01 | MsG0680032996.01 | 0.826407 | 2.758957e-54 | 2.585250e-51 |
| MsG0480021853.01 | MsG0680032996.01 | 0.822673 | 2.088659e-53 | 1.760020e-50 |
| MsG0480021927.01 | MsG0680032996.01 | 0.831770 | 1.382803e-55 | 1.515664e-52 |
| MsG0480022222.01 | MsG0680032996.01 | 0.829253 | 5.707687e-55 | 5.810782e-52 |
| MsG0480022259.01 | MsG0680032996.01 | 0.811222 | 7.797986e-51 | 4.799576e-48 |
| MsG0480022533.01 | MsG0680032996.01 | 0.807405 | 5.137255e-50 | 2.858968e-47 |
| MsG0480022575.01 | MsG0680032996.01 | 0.807931 | 3.972506e-50 | 2.241113e-47 |
| MsG0480022707.01 | MsG0680032996.01 | 0.820804 | 5.653361e-53 | 4.519021e-50 |
| MsG0480022984.01 | MsG0680032996.01 | 0.809823 | 1.564276e-50 | 9.278535e-48 |
| MsG0480022985.01 | MsG0680032996.01 | 0.811944 | 5.433833e-51 | 3.408986e-48 |
| MsG0480023248.01 | MsG0680032996.01 | 0.833180 | 6.182722e-56 | 7.065529e-53 |
| MsG0480023251.01 | MsG0680032996.01 | 0.815681 | 8.163646e-52 | 5.666209e-49 |
| MsG0480023503.01 | MsG0680032996.01 | 0.803243 | 3.826196e-49 | 1.913106e-46 |
| MsG0480023654.01 | MsG0680032996.01 | 0.822836 | 1.913648e-53 | 1.620034e-50 |
| MsG0480023814.01 | MsG0680032996.01 | 0.803881 | 2.820633e-49 | 1.433741e-46 |
| MsG0580024114.01 | MsG0680032996.01 | 0.805004 | 1.645561e-49 | 8.609294e-47 |
| MsG0580024363.01 | MsG0680032996.01 | -0.822358 | 2.472169e-53 | 2.064633e-50 |
| MsG0580024495.01 | MsG0680032996.01 | 0.812364 | 4.400153e-51 | 2.792218e-48 |
| MsG0580024621.01 | MsG0680032996.01 | 0.804780 | 1.833096e-49 | 9.535589e-47 |
| MsG0380015166.01 | MsG0680032996.01 | 0.820738 | 5.852506e-53 | 4.669341e-50 |
| MsG0380016004.01 | MsG0680032996.01 | 0.848115 | 7.529586e-60 | 1.367221e-56 |
| MsG0380016064.01 | MsG0680032996.01 | 0.801114 | 1.049097e-48 | 4.969416e-46 |
| MsG0380016191.01 | MsG0680032996.01 | -0.816041 | 6.782342e-52 | 4.754278e-49 |
| MsG0380016475.01 | MsG0680032996.01 | 0.845203 | 4.702098e-59 | 7.776897e-56 |
| MsG0380016828.01 | MsG0680032996.01 | -0.813991 | 1.933346e-51 | 1.281605e-48 |
| MsG0380016910.01 | MsG0680032996.01 | 0.837059 | 6.500077e-57 | 8.345841e-54 |
| MsG0380017178.01 | MsG0680032996.01 | -0.823333 | 1.465408e-53 | 1.257982e-50 |
| MsG0380017266.01 | MsG0680032996.01 | -0.809008 | 2.339307e-50 | 1.357748e-47 |
| MsG0380017286.01 | MsG0680032996.01 | 0.827356 | 1.637294e-54 | 1.577066e-51 |
| MsG0380017461.01 | MsG0680032996.01 | 0.829849 | 4.088975e-55 | 4.236211e-52 |
| MsG0380017680.01 | MsG0680032996.01 | 0.822607 | 2.163374e-53 | 1.819729e-50 |
| MsG0380017746.01 | MsG0680032996.01 | 0.822279 | 2.579120e-53 | 2.149008e-50 |
| MsG0380017941.01 | MsG0680032996.01 | 0.824060 | 9.901496e-54 | 8.676335e-51 |
| MsG0480018251.01 | MsG0680032996.01 | 0.805221 | 1.482518e-49 | 7.799413e-47 |
| MsG0580026165.01 | MsG0680032996.01 | 0.802605 | 5.181869e-49 | 2.549133e-46 |
| MsG0580027401.01 | MsG0680032996.01 | 0.841887 | 3.617958e-58 | 5.391030e-55 |
| MsG0580027833.01 | MsG0680032996.01 | 0.830198 | 3.361287e-55 | 3.517117e-52 |
| MsG0580027922.01 | MsG0680032996.01 | 0.830999 | 2.140017e-55 | 2.292286e-52 |
| MsG0580027937.01 | MsG0680032996.01 | 0.821879 | 3.193103e-53 | 2.630432e-50 |
| MsG0580028527.01 | MsG0680032996.01 | 0.851657 | 7.693489e-61 | 1.568116e-57 |
| MsG0580029554.01 | MsG0680032996.01 | 0.835079 | 2.067916e-56 | 2.501382e-53 |
| MsG0580029999.01 | MsG0680032996.01 | -0.814320 | 1.636352e-51 | 1.094510e-48 |
| MsG0680030316.01 | MsG0680032996.01 | 0.822214 | 2.670452e-53 | 2.220844e-50 |
| MsG0680030415.01 | MsG0680032996.01 | 0.804637 | 1.963724e-49 | 1.017679e-46 |
| MsG0680030629.01 | MsG0680032996.01 | 0.832151 | 1.113038e-55 | 1.233460e-52 |
| MsG0680030667.01 | MsG0680032996.01 | 0.819815 | 9.526692e-53 | 7.408903e-50 |
| MsG0280006456.01 | MsG0680032996.01 | 0.810294 | 1.238255e-50 | 7.435417e-48 |
| MsG0280006491.01 | MsG0680032996.01 | 0.803761 | 2.987639e-49 | 1.513889e-46 |
| MsG0280007064.01 | MsG0680032996.01 | 0.804224 | 2.393520e-49 | 1.227286e-46 |
| MsG0280007164.01 | MsG0680032996.01 | 0.808224 | 3.440223e-50 | 1.956090e-47 |
| MsG0280007547.01 | MsG0680032996.01 | 0.842208 | 2.976163e-58 | 4.479577e-55 |
| MsG0280007826.01 | MsG0680032996.01 | 0.805965 | 1.034783e-49 | 5.549280e-47 |
| MsG0280008073.01 | MsG0680032996.01 | 0.808051 | 3.743973e-50 | 2.118995e-47 |
| MsG0280008112.01 | MsG0680032996.01 | 0.817644 | 2.963396e-52 | 2.170255e-49 |
| MsG0280008182.01 | MsG0680032996.01 | 0.804045 | 2.608361e-49 | 1.331381e-46 |
| MsG0280008615.01 | MsG0680032996.01 | 0.813112 | 3.018058e-51 | 1.953345e-48 |
| MsG0280008894.01 | MsG0680032996.01 | 0.811839 | 5.728047e-51 | 3.583399e-48 |
| MsG0280009646.01 | MsG0680032996.01 | 0.801834 | 7.467194e-49 | 3.601998e-46 |
| MsG0280010204.01 | MsG0680032996.01 | 0.810029 | 1.412122e-50 | 8.421816e-48 |
| MsG0280010378.01 | MsG0680032996.01 | 0.841524 | 4.510793e-58 | 6.645887e-55 |
| MsG0280010443.01 | MsG0680032996.01 | 0.845506 | 3.891271e-59 | 6.498938e-56 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680032996.01.T01 | MTR_8g037235 | 61.333 | 75 | 29 | 0 | 1 | 75 | 940 | 1014 | 2.22e-20 | 85.1 |
| MsG0680032996.01.T01 | MTR_8g037235 | 58.333 | 72 | 22 | 1 | 1 | 72 | 988 | 1051 | 6.11e-16 | 72.4 |
| MsG0680032996.01.T01 | MTR_8g037235 | 67.391 | 46 | 15 | 0 | 30 | 75 | 921 | 966 | 1.07e-12 | 63.2 |
| MsG0680032996.01.T01 | MTR_8g012005 | 54.286 | 70 | 32 | 0 | 1 | 70 | 150 | 219 | 4.95e-16 | 71.6 |
| MsG0680032996.01.T01 | MTR_8g011870 | 48.649 | 74 | 35 | 1 | 5 | 75 | 211 | 284 | 3.67e-12 | 61.6 |
| MsG0680032996.01.T01 | MTR_8g011870 | 48.000 | 75 | 23 | 1 | 1 | 75 | 258 | 316 | 5.88e-12 | 60.8 |
| MsG0680032996.01.T01 | MTR_3g072140 | 67.391 | 46 | 13 | 1 | 30 | 75 | 827 | 870 | 8.28e-11 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 30 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTACGGGTAAACGCAAAA+TGG | 0.192242 | 6:-54405826 | MsG0680032996.01.T01:CDS |
| CATGCAGGCGTCACCTAAAC+TGG | 0.324518 | 6:-54405880 | MsG0680032996.01.T01:CDS |
| GATGATTGCACATCCACTTT+AGG | 0.339367 | 6:+54406035 | None:intergenic |
| ACTACGGGTAAACGCAAAAT+GGG | 0.399612 | 6:-54405825 | MsG0680032996.01.T01:CDS |
| TTCTCATAAATGTCCAGTTT+AGG | 0.408958 | 6:+54405867 | None:intergenic |
| GACGCCTGCATGTCTACTTT+GGG | 0.436436 | 6:+54405891 | None:intergenic |
| TGACGCCTGCATGTCTACTT+TGG | 0.441500 | 6:+54405890 | None:intergenic |
| ATCATCGCATAACGTGGAAA+TGG | 0.450559 | 6:-54406018 | MsG0680032996.01.T01:CDS |
| GATTGAACGATCAATTACTA+TGG | 0.453291 | 6:-54405976 | MsG0680032996.01.T01:CDS |
| TGCATGTTCACTTCGGATGA+TGG | 0.473045 | 6:+54405921 | None:intergenic |
| GTCATCGACTAACATGGAAA+TGG | 0.499024 | 6:-54405946 | MsG0680032996.01.T01:CDS |
| GTCAGAGGACGTGAAAGTGC+AGG | 0.529090 | 6:-54406063 | MsG0680032996.01.T01:CDS |
| CTGATCAACTAACATGGAAA+CGG | 0.552113 | 6:-54406090 | None:intergenic |
| ATTAATGAGAACGGTACTAC+GGG | 0.555380 | 6:-54405840 | MsG0680032996.01.T01:CDS |
| AGTGCAGGCTGCACCTAAAG+TGG | 0.563132 | 6:-54406048 | MsG0680032996.01.T01:CDS |
| AATTAATGAGAACGGTACTA+CGG | 0.564720 | 6:-54405841 | MsG0680032996.01.T01:CDS |
| GACCAAGCTGATTGGTGAGG+TGG | 0.565992 | 6:-54405775 | MsG0680032996.01.T01:CDS |
| GTCACCCAAAGTAGACATGC+AGG | 0.578396 | 6:-54405895 | MsG0680032996.01.T01:CDS |
| AGTTGAGTCATCGACTAACA+TGG | 0.580553 | 6:-54405952 | MsG0680032996.01.T01:CDS |
| AGCCACCTCACCAATCAGCT+TGG | 0.584705 | 6:+54405773 | None:intergenic |
| CATGGAAACGGAGCCGTCAG+AGG | 0.585593 | 6:-54406078 | MsG0680032996.01.T01:CDS |
| AAATGGGGATTGTTGATGAA+AGG | 0.595868 | 6:-54405809 | MsG0680032996.01.T01:CDS |
| TGCACTTTCACGTCCTCTGA+CGG | 0.602575 | 6:+54406065 | None:intergenic |
| ATCGCATAACGTGGAAATGG+AGG | 0.611040 | 6:-54406015 | MsG0680032996.01.T01:CDS |
| GAGAATGCAATTAATGAGAA+CGG | 0.633127 | 6:-54405849 | MsG0680032996.01.T01:CDS |
| TGTGCAATCATCGCATAACG+TGG | 0.653184 | 6:-54406024 | MsG0680032996.01.T01:CDS |
| TGACAACTGCATGTTCACTT+CGG | 0.664406 | 6:+54405914 | None:intergenic |
| AAAGACCAAGCTGATTGGTG+AGG | 0.672077 | 6:-54405778 | MsG0680032996.01.T01:CDS |
| CTACGGGTAAACGCAAAATG+GGG | 0.679439 | 6:-54405824 | MsG0680032996.01.T01:CDS |
| AATGGAGGCATCAATTACTG+CGG | 0.717083 | 6:-54406000 | MsG0680032996.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AATTAATGAGAACGGTACTA+CGG | - | Chr6:54406006-54406025 | MsG0680032996.01.T01:CDS | 30.0% | |
| GAGAATGCAATTAATGAGAA+CGG | - | Chr6:54405998-54406017 | MsG0680032996.01.T01:CDS | 30.0% | |
| GATTGAACGATCAATTACTA+TGG | - | Chr6:54405871-54405890 | MsG0680032996.01.T01:CDS | 30.0% | |
| TTCTCATAAATGTCCAGTTT+AGG | + | Chr6:54405983-54406002 | None:intergenic | 30.0% | |
| ATTAATGAGAACGGTACTAC+GGG | - | Chr6:54406007-54406026 | MsG0680032996.01.T01:CDS | 35.0% | |
| CATAAAAAGACCAAGCTGAT+TGG | - | Chr6:54406064-54406083 | MsG0680032996.01.T01:CDS | 35.0% | |
| ! | AAATGGGGATTGTTGATGAA+AGG | - | Chr6:54406038-54406057 | MsG0680032996.01.T01:CDS | 35.0% |
| ACTACGGGTAAACGCAAAAT+GGG | - | Chr6:54406022-54406041 | MsG0680032996.01.T01:CDS | 40.0% | |
| ATCATCGCATAACGTGGAAA+TGG | - | Chr6:54405829-54405848 | MsG0680032996.01.T01:CDS | 40.0% | |
| GATGATTGCACATCCACTTT+AGG | + | Chr6:54405815-54405834 | None:intergenic | 40.0% | |
| TACTACGGGTAAACGCAAAA+TGG | - | Chr6:54406021-54406040 | MsG0680032996.01.T01:CDS | 40.0% | |
| TGACAACTGCATGTTCACTT+CGG | + | Chr6:54405936-54405955 | None:intergenic | 40.0% | |
| ! | AGTTGAGTCATCGACTAACA+TGG | - | Chr6:54405895-54405914 | MsG0680032996.01.T01:CDS | 40.0% |
| ! | GTCATCGACTAACATGGAAA+TGG | - | Chr6:54405901-54405920 | MsG0680032996.01.T01:CDS | 40.0% |
| !! | AATGGAGGCATCAATTACTG+CGG | - | Chr6:54405847-54405866 | MsG0680032996.01.T01:CDS | 40.0% |
| AAAGACCAAGCTGATTGGTG+AGG | - | Chr6:54406069-54406088 | MsG0680032996.01.T01:CDS | 45.0% | |
| ATCGCATAACGTGGAAATGG+AGG | - | Chr6:54405832-54405851 | MsG0680032996.01.T01:CDS | 45.0% | |
| CTACGGGTAAACGCAAAATG+GGG | - | Chr6:54406023-54406042 | MsG0680032996.01.T01:CDS | 45.0% | |
| TGCATGTTCACTTCGGATGA+TGG | + | Chr6:54405929-54405948 | None:intergenic | 45.0% | |
| TGTGCAATCATCGCATAACG+TGG | - | Chr6:54405823-54405842 | MsG0680032996.01.T01:CDS | 45.0% | |
| GACGCCTGCATGTCTACTTT+GGG | + | Chr6:54405959-54405978 | None:intergenic | 50.0% | |
| GTCACCCAAAGTAGACATGC+AGG | - | Chr6:54405952-54405971 | MsG0680032996.01.T01:CDS | 50.0% | |
| TGACGCCTGCATGTCTACTT+TGG | + | Chr6:54405960-54405979 | None:intergenic | 50.0% | |
| TGCACTTTCACGTCCTCTGA+CGG | + | Chr6:54405785-54405804 | None:intergenic | 50.0% | |
| AGCCACCTCACCAATCAGCT+TGG | + | Chr6:54406077-54406096 | None:intergenic | 55.0% | |
| AGTGCAGGCTGCACCTAAAG+TGG | - | Chr6:54405799-54405818 | MsG0680032996.01.T01:CDS | 55.0% | |
| CATGCAGGCGTCACCTAAAC+TGG | - | Chr6:54405967-54405986 | MsG0680032996.01.T01:CDS | 55.0% | |
| GACCAAGCTGATTGGTGAGG+TGG | - | Chr6:54406072-54406091 | MsG0680032996.01.T01:CDS | 55.0% | |
| ! | GTCAGAGGACGTGAAAGTGC+AGG | - | Chr6:54405784-54405803 | MsG0680032996.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 54405770 | 54406099 | 54405770 | ID=MsG0680032996.01;Name=MsG0680032996.01 |
| Chr6 | mRNA | 54405770 | 54406099 | 54405770 | ID=MsG0680032996.01.T01;Parent=MsG0680032996.01;Name=MsG0680032996.01.T01;_AED=0.45;_eAED=0.45;_QI=0|-1|0|1|-1|1|1|0|109 |
| Chr6 | exon | 54405770 | 54406099 | 54405770 | ID=MsG0680032996.01.T01:exon:9251;Parent=MsG0680032996.01.T01 |
| Chr6 | CDS | 54405770 | 54406099 | 54405770 | ID=MsG0680032996.01.T01:cds;Parent=MsG0680032996.01.T01 |
| Gene Sequence |
| Protein sequence |
