Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083070 | XP_013469244.1 | 97.166 | 741 | 21 | 0 | 1 | 741 | 1 | 741 | 0.0 | 1479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083070 | sp|Q9ZVT8|RF4_ARATH | 36.296 | 810 | 404 | 21 | 21 | 737 | 29 | 819 | 5.31e-127 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083070 | A0A072VN69 | 97.166 | 741 | 21 | 0 | 1 | 741 | 1 | 741 | 0.0 | 1479 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034420 | Msa0083070 | 0.921980 | 1.780240e-88 | -8.615850e-47 |
| Msa0046740 | Msa0083070 | 0.809643 | 1.709572e-50 | -8.615850e-47 |
| Msa0056470 | Msa0083070 | 0.817010 | 4.116240e-52 | -8.615850e-47 |
| Msa0064350 | Msa0083070 | 0.821171 | 4.652469e-53 | -8.615850e-47 |
| Msa0073480 | Msa0083070 | 0.802721 | 4.904783e-49 | -8.615850e-47 |
| Msa0078650 | Msa0083070 | 0.820171 | 7.896774e-53 | -8.615850e-47 |
| Msa0082280 | Msa0083070 | 0.811743 | 6.010451e-51 | -8.615850e-47 |
| Msa0083070 | Msa0094470 | 0.810140 | 1.336292e-50 | -8.615850e-47 |
| Msa0083070 | Msa0125450 | 0.800051 | 1.727623e-48 | -8.615850e-47 |
| Msa0083070 | Msa0125540 | 0.809879 | 1.521397e-50 | -8.615850e-47 |
| Msa0083070 | Msa0126370 | 0.810163 | 1.321116e-50 | -8.615850e-47 |
| Msa0083070 | Msa0127310 | 0.801503 | 8.730705e-49 | -8.615850e-47 |
| Msa0083070 | Msa0129060 | 0.818852 | 1.578539e-52 | -8.615850e-47 |
| Msa0083070 | Msa0151370 | 0.802290 | 6.019094e-49 | -8.615850e-47 |
| Msa0083070 | Msa0171290 | 0.800127 | 1.667575e-48 | -8.615850e-47 |
| Msa0083070 | Msa0186890 | 0.801657 | 8.118891e-49 | -8.615850e-47 |
| Msa0083070 | Msa0191050 | 0.804393 | 2.207837e-49 | -8.615850e-47 |
| Msa0083070 | Msa0195630 | 0.802823 | 4.672887e-49 | -8.615850e-47 |
| Msa0083070 | Msa0199880 | 0.823605 | 1.266208e-53 | -8.615850e-47 |
| Msa0083070 | Msa0229760 | 0.808855 | 2.522981e-50 | -8.615850e-47 |
| Msa0083070 | Msa0267970 | 0.830276 | 3.217449e-55 | -8.615850e-47 |
| Msa0083070 | Msa0314720 | 0.826816 | 2.204075e-54 | -8.615850e-47 |
| Msa0083070 | Msa0319850 | 0.805920 | 1.057483e-49 | -8.615850e-47 |
| Msa0083070 | Msa0366890 | 0.809413 | 1.915935e-50 | -8.615850e-47 |
| Msa0083070 | Msa0369450 | 0.806497 | 7.993109e-50 | -8.615850e-47 |
| Msa0083070 | Msa0372670 | 0.802089 | 6.619184e-49 | -8.615850e-47 |
| Msa0083070 | Msa0376300 | 0.813170 | 2.931498e-51 | -8.615850e-47 |
| Msa0083070 | Msa0387730 | 0.836561 | 8.709214e-57 | -8.615850e-47 |
| Msa0083070 | Msa0414800 | 0.812156 | 4.885521e-51 | -8.615850e-47 |
| Msa0083070 | Msa0474950 | 0.839689 | 1.363487e-57 | -8.615850e-47 |
| Msa0083070 | Msa0481480 | 0.805186 | 1.507444e-49 | -8.615850e-47 |
| Msa0083070 | Msa0497490 | 0.811846 | 5.707954e-51 | -8.615850e-47 |
| Msa0083070 | Msa0518390 | 0.808206 | 3.470413e-50 | -8.615850e-47 |
| Msa0083070 | Msa0518450 | 0.800430 | 1.446467e-48 | -8.615850e-47 |
| Msa0083070 | Msa0524500 | 0.811570 | 6.552865e-51 | -8.615850e-47 |
| Msa0083070 | Msa0552810 | 0.844398 | 7.750563e-59 | -8.615850e-47 |
| Msa0083070 | Msa0581070 | 0.808875 | 2.498526e-50 | -8.615850e-47 |
| Msa0083070 | Msa0610530 | 0.821113 | 4.797710e-53 | -8.615850e-47 |
| Msa0083070 | Msa0610560 | 0.829331 | 5.464454e-55 | -8.615850e-47 |
| Msa0083070 | Msa0615990 | 0.805531 | 1.276198e-49 | -8.615850e-47 |
| Msa0083070 | Msa0661300 | 0.813575 | 2.388165e-51 | -8.615850e-47 |
| Msa0083070 | Msa0687630 | 0.814132 | 1.800163e-51 | -8.615850e-47 |
| Msa0083070 | Msa0703230 | 0.805246 | 1.464370e-49 | -8.615850e-47 |
| Msa0083070 | Msa0746420 | 0.998422 | 1.311694e-264 | -8.615850e-47 |
| Msa0083070 | Msa0750880 | 0.803821 | 2.903515e-49 | -8.615850e-47 |
| Msa0083070 | Msa0818310 | 0.814226 | 1.715757e-51 | -8.615850e-47 |
| Msa0083070 | Msa0858770 | 0.808531 | 2.958552e-50 | -8.615850e-47 |
| Msa0083070 | Msa0968590 | 0.838144 | 3.424496e-57 | -8.615850e-47 |
| Msa0083070 | Msa1013400 | 0.805416 | 1.348824e-49 | -8.615850e-47 |
| Msa0083070 | Msa1019260 | 0.800908 | 1.155956e-48 | -8.615850e-47 |
| Msa0083070 | Msa1081150 | 0.818595 | 1.805643e-52 | -8.615850e-47 |
| Msa0083070 | Msa1101600 | 0.821873 | 3.203626e-53 | -8.615850e-47 |
| Msa0083070 | Msa1104140 | 0.803610 | 3.210575e-49 | -8.615850e-47 |
| Msa0083070 | Msa1119200 | 0.804783 | 1.830268e-49 | -8.615850e-47 |
| Msa0083070 | Msa1126510 | 0.848599 | 5.532564e-60 | -8.615850e-47 |
| Msa0083070 | Msa1126770 | 0.820803 | 5.655014e-53 | -8.615850e-47 |
| Msa0083070 | Msa1127890 | 0.839483 | 1.542329e-57 | -8.615850e-47 |
| Msa0083070 | Msa1130980 | 0.822545 | 2.237214e-53 | -8.615850e-47 |
| Msa0083070 | Msa1165870 | 0.823622 | 1.254296e-53 | -8.615850e-47 |
| Msa0083070 | Msa1165940 | 0.831118 | 2.000411e-55 | -8.615850e-47 |
| Msa0083070 | Msa1166330 | 0.810594 | 1.066541e-50 | -8.615850e-47 |
| Msa0083070 | Msa1166340 | 0.805772 | 1.136134e-49 | -8.615850e-47 |
| Msa0083070 | Msa1166860 | 0.846130 | 2.634844e-59 | -8.615850e-47 |
| Msa0083070 | Msa1184370 | 0.817546 | 3.117936e-52 | -8.615850e-47 |
| Msa0083070 | Msa1218600 | 0.815914 | 7.241178e-52 | -8.615850e-47 |
| Msa0083070 | Msa1257510 | 0.823240 | 1.540632e-53 | -8.615850e-47 |
| Msa0083070 | Msa1292830 | 0.835368 | 1.747745e-56 | -8.615850e-47 |
| Msa0083070 | Msa1304820 | 0.807559 | 4.764900e-50 | -8.615850e-47 |
| Msa0083070 | Msa1307950 | 0.827413 | 1.586183e-54 | -8.615850e-47 |
| Msa0083070 | Msa1321630 | 0.804121 | 2.515126e-49 | -8.615850e-47 |
| Msa0083070 | Msa1367590 | 0.801644 | 8.168276e-49 | -8.615850e-47 |
| Msa0083070 | Msa1370860 | 0.813501 | 2.479280e-51 | -8.615850e-47 |
| Msa0083070 | Msa1374120 | 0.801618 | 8.270945e-49 | -8.615850e-47 |
| Msa0083070 | Msa1394290 | 0.803838 | 2.879173e-49 | -8.615850e-47 |
| Msa0083070 | Msa1404190 | 0.821268 | 4.419011e-53 | -8.615850e-47 |
| Msa0083070 | Msa1418340 | 0.825602 | 4.286604e-54 | -8.615850e-47 |
| Msa0083070 | Msa1422580 | 0.804546 | 2.050849e-49 | -8.615850e-47 |
| Msa0083070 | Msa1442850 | 0.807739 | 4.362650e-50 | -8.615850e-47 |
| Msa0083070 | Msa1443780 | 0.825380 | 4.837430e-54 | -8.615850e-47 |
| Msa0083070 | Msa1465080 | 0.819383 | 1.195628e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083070 | MtrunA17_Chr1g0196471 | 97.131 | 732 | 21 | 0 | 10 | 741 | 1 | 732 | 0.0 | 1458 |
| Msa0083070 | MtrunA17_Chr2g0286891 | 33.844 | 783 | 395 | 20 | 71 | 737 | 102 | 877 | 1.70e-112 | 361 |
| Msa0083070 | MtrunA17_Chr1g0149201 | 85.526 | 76 | 11 | 0 | 125 | 200 | 1 | 76 | 1.20e-36 | 132 |
| Msa0083070 | MtrunA17_Chr4g0054731 | 27.136 | 398 | 268 | 6 | 357 | 733 | 334 | 730 | 5.18e-31 | 130 |
| Msa0083070 | MtrunA17_Chr4g0054731 | 32.418 | 182 | 80 | 6 | 52 | 211 | 64 | 224 | 7.98e-15 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0083070 | AT1G03365.1 | 36.296 | 810 | 404 | 21 | 21 | 737 | 29 | 819 | 5.40e-128 | 400 |
| Msa0083070 | AT1G03365.2 | 36.296 | 810 | 404 | 21 | 21 | 737 | 29 | 819 | 5.40e-128 | 400 |
| Msa0083070 | AT4G03000.1 | 35.075 | 804 | 413 | 22 | 21 | 737 | 30 | 811 | 1.49e-120 | 381 |
| Msa0083070 | AT4G03000.2 | 35.075 | 804 | 413 | 22 | 21 | 737 | 30 | 811 | 1.49e-120 | 381 |
| Msa0083070 | AT4G03000.4 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 1.60e-72 | 249 |
| Msa0083070 | AT4G03000.6 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 1.60e-72 | 249 |
| Msa0083070 | AT4G03000.5 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 2.51e-72 | 250 |
| Msa0083070 | AT4G03000.3 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 5.06e-72 | 248 |
| Msa0083070 | AT2G35330.1 | 29.480 | 346 | 222 | 4 | 406 | 733 | 390 | 731 | 2.11e-34 | 140 |
| Msa0083070 | AT2G35330.1 | 35.632 | 174 | 85 | 6 | 56 | 220 | 86 | 241 | 2.04e-17 | 87.4 |
| Msa0083070 | AT2G35330.2 | 29.480 | 346 | 222 | 4 | 406 | 733 | 363 | 704 | 2.85e-34 | 140 |
| Msa0083070 | AT2G35330.2 | 35.632 | 174 | 85 | 6 | 56 | 220 | 59 | 214 | 1.56e-17 | 87.8 |
| Msa0083070 | AT1G32530.1 | 27.326 | 344 | 228 | 6 | 408 | 733 | 365 | 704 | 1.00e-24 | 110 |
| Msa0083070 | AT1G32530.1 | 32.075 | 159 | 93 | 4 | 57 | 206 | 46 | 198 | 1.42e-12 | 71.6 |
Find 222 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTGATGTAAACTCTTTA+TGG | 0.161953 | 1_2:+62064021 | None:intergenic |
| CACAGATGGAGTACTTATTT+TGG | 0.170025 | 1_2:+62061263 | None:intergenic |
| TAGATATAGACTTTCCTTAA+TGG | 0.209132 | 1_2:-62060985 | Msa0083070:three_prime_UTR |
| TCGTCTTTCGCTGTGGGTTT+TGG | 0.209418 | 1_2:+62066012 | None:intergenic |
| ATCAAGAAGGTTGTTGATTT+AGG | 0.243477 | 1_2:-62064506 | Msa0083070:CDS |
| GAAGGTCATTTACACCATTA+TGG | 0.248027 | 1_2:-62060905 | Msa0083070:three_prime_UTR |
| AGCTTCGATTCAGCGGAATT+AGG | 0.251314 | 1_2:-62064653 | Msa0083070:CDS |
| CTACTGCTGCCCAAGAAATT+TGG | 0.257158 | 1_2:+62061005 | None:intergenic |
| GGACTTACTGATGAGTAATT+TGG | 0.257637 | 1_2:-62064549 | Msa0083070:CDS |
| GTAGGACCACCATCGAATTT+AGG | 0.260424 | 1_2:-62061035 | Msa0083070:CDS |
| CACTTCTTCCATACTCATTC+TGG | 0.283048 | 1_2:-62063346 | Msa0083070:CDS |
| TTCACGATTCCTATCCATTA+AGG | 0.283232 | 1_2:+62060971 | None:intergenic |
| CACTTCAAGGTGAAGTAATA+TGG | 0.284165 | 1_2:+62060485 | None:intergenic |
| AGGATTCATGCCAAATTTCT+TGG | 0.286335 | 1_2:-62061015 | Msa0083070:CDS |
| TACCTGCATAACCTTCTTAT+TGG | 0.286548 | 1_2:+62063527 | None:intergenic |
| CTTGCCCAAAGCCTCATTAA+AGG | 0.287064 | 1_2:+62063644 | None:intergenic |
| TATTCCCTTTAATGAGGCTT+TGG | 0.297007 | 1_2:-62063649 | Msa0083070:CDS |
| GACTGAACATTTAACTTTGA+TGG | 0.306629 | 1_2:+62064140 | None:intergenic |
| GGTGCGGCTGATGGTGGTAT+TGG | 0.311045 | 1_2:+62066052 | None:intergenic |
| CCTTCATCCCTTGCTTCTCA+TGG | 0.314057 | 1_2:+62061070 | None:intergenic |
| ATTACAGGGTAGAGTGAAAA+AGG | 0.314098 | 1_2:-62061475 | Msa0083070:intron |
| GGCAAAGCGGGTGTTAAATT+AGG | 0.314606 | 1_2:-62063957 | Msa0083070:CDS |
| CTTTGCCTCCAGAATGAGTA+TGG | 0.314804 | 1_2:+62063338 | None:intergenic |
| TTGCGGATTTGTAAATTCAT+AGG | 0.322883 | 1_2:+62064676 | None:intergenic |
| GCTTCGATTCAGCGGAATTA+GGG | 0.329207 | 1_2:-62064652 | Msa0083070:CDS |
| CCCACCCTTCACCCCAAAAT+AGG | 0.330255 | 1_2:-62060819 | Msa0083070:three_prime_UTR |
| CCCGCTTTGCCACAAGCTTT+AGG | 0.332600 | 1_2:+62063969 | None:intergenic |
| CCACCACTCAGTTGACCTTC+TGG | 0.338744 | 1_2:+62064203 | None:intergenic |
| TTCCACCAGCTGGTTTGTCT+TGG | 0.343705 | 1_2:+62061196 | None:intergenic |
| TTTGTTCCTGCAGGCTTGTC+AGG | 0.343757 | 1_2:-62060539 | Msa0083070:three_prime_UTR |
| GTGCGGCTGATGGTGGTATT+GGG | 0.343901 | 1_2:+62066053 | None:intergenic |
| TAGATTCTGATTTACTTTCC+TGG | 0.344878 | 1_2:+62064072 | None:intergenic |
| TCCACCAGCTGGTTTGTCTT+GGG | 0.350976 | 1_2:+62061197 | None:intergenic |
| GCAGTTACTGCATTATAGTT+TGG | 0.354061 | 1_2:-62064330 | Msa0083070:CDS |
| CGCTTCAATCTTCCACCAGC+TGG | 0.354227 | 1_2:+62061186 | None:intergenic |
| ATCTCGAGCACAAGAATTGC+AGG | 0.366277 | 1_2:-62063577 | Msa0083070:CDS |
| TTTGGGTATTACAAGGGTTA+GGG | 0.369047 | 1_2:+62066030 | None:intergenic |
| TCCGCTGAATCGAAGCTTTG+CGG | 0.370291 | 1_2:+62064659 | None:intergenic |
| AATAGCACAGAGAAACTTGA+TGG | 0.375550 | 1_2:-62060710 | Msa0083070:three_prime_UTR |
| TTTACACATAACTGTCTCTA+AGG | 0.376038 | 1_2:+62060752 | None:intergenic |
| TATTATAATGGCTGAAGAAA+TGG | 0.381498 | 1_2:-62064810 | Msa0083070:CDS |
| CAAGCCTGCAGGAACAAAAC+AGG | 0.383571 | 1_2:+62060544 | None:intergenic |
| ATTCCCTTTAATGAGGCTTT+GGG | 0.387334 | 1_2:-62063648 | Msa0083070:CDS |
| AAGAGTTTACATCAGTGCTT+AGG | 0.388024 | 1_2:-62064016 | Msa0083070:CDS |
| TCTTCAATGGTTACCGAAGA+TGG | 0.388812 | 1_2:-62064728 | Msa0083070:CDS |
| TATTATTACTATGCACTTCA+AGG | 0.395160 | 1_2:+62060472 | None:intergenic |
| TTTGCAGCGCTACCTCCTTC+GGG | 0.396787 | 1_2:+62063780 | None:intergenic |
| AATAGCTATTGAAAATTAAG+AGG | 0.403419 | 1_2:+62060571 | None:intergenic |
| TGAAGCAATGTGGGAGTTGC+TGG | 0.403989 | 1_2:-62064258 | Msa0083070:CDS |
| CAGTCAAGAAATGGCTGAAA+TGG | 0.412394 | 1_2:-62064477 | Msa0083070:CDS |
| AATGTTCAGTCTGATATGAT+TGG | 0.413548 | 1_2:-62064128 | Msa0083070:CDS |
| CATTGCTTCAGTTACTGTTA+AGG | 0.415267 | 1_2:+62064271 | None:intergenic |
| GATAGACAAGGGTATTATAA+TGG | 0.415815 | 1_2:-62064822 | Msa0083070:CDS |
| ACTGAACATTTAACTTTGAT+GGG | 0.418576 | 1_2:+62064141 | None:intergenic |
| TTGCATCAGGAGATAGAAAA+GGG | 0.421960 | 1_2:-62063138 | Msa0083070:CDS |
| ATAAAATGTAGCAGCCATAA+TGG | 0.423399 | 1_2:+62060891 | None:intergenic |
| TTGTACAGAAGAACAACATT+TGG | 0.424492 | 1_2:-62064621 | Msa0083070:CDS |
| CACACTTAAGGAACCATCTT+CGG | 0.424685 | 1_2:+62064715 | None:intergenic |
| CAACACACTGAATACTTTGA+AGG | 0.424983 | 1_2:-62064399 | Msa0083070:CDS |
| AGGTGCAAAGCTGGAATGAC+TGG | 0.426147 | 1_2:-62063551 | Msa0083070:CDS |
| GATTCAGCGGAATTAGGGTT+AGG | 0.429023 | 1_2:-62064647 | Msa0083070:CDS |
| TCATGGAGCTCATTGCAATT+CGG | 0.431116 | 1_2:+62061087 | None:intergenic |
| CAACCGACCTCTCCTCTGAT+AGG | 0.432294 | 1_2:+62061142 | None:intergenic |
| TGCAGGATGAGGTGCAAAGC+TGG | 0.432702 | 1_2:-62063560 | Msa0083070:CDS |
| CCCAAATAGTAGAGTAGAAA+CGG | 0.434007 | 1_2:-62066138 | None:intergenic |
| AGATTCTGATTTACTTTCCT+GGG | 0.435378 | 1_2:+62064073 | None:intergenic |
| GAAATCATCCTCCACACTTA+AGG | 0.438705 | 1_2:+62064703 | None:intergenic |
| AGATAAGCTTCGCAAGCTTC+AGG | 0.443538 | 1_2:-62063502 | Msa0083070:CDS |
| ATTCTCCTCTTCCGCTCAAA+AGG | 0.445328 | 1_2:-62063691 | Msa0083070:CDS |
| TTGCCCAAAGCCTCATTAAA+GGG | 0.446677 | 1_2:+62063645 | None:intergenic |
| TGTACAGAAGAACAACATTT+GGG | 0.449983 | 1_2:-62064620 | Msa0083070:CDS |
| CTTGCATCAGGAGATAGAAA+AGG | 0.452299 | 1_2:-62063139 | Msa0083070:CDS |
| AGATGATGAGTCTTCTTCAA+TGG | 0.452751 | 1_2:-62064741 | Msa0083070:CDS |
| ACAAAAGGAGTTAGTATAGC+AGG | 0.455522 | 1_2:-62063840 | Msa0083070:CDS |
| TGGCTGAAATGGCCGTTTCA+AGG | 0.456420 | 1_2:-62064466 | Msa0083070:CDS |
| GGATTCATGCCAAATTTCTT+GGG | 0.458310 | 1_2:-62061014 | Msa0083070:CDS |
| CCAAATAGTAGAGTAGAAAC+GGG | 0.459460 | 1_2:-62066137 | None:intergenic |
| CCTAAAGCTTGTGGCAAAGC+GGG | 0.460953 | 1_2:-62063969 | Msa0083070:CDS |
| GCGGAAGAGGAGAATGGCTT+AGG | 0.464954 | 1_2:+62063699 | None:intergenic |
| ACCTTCAAAATGAACCTCCT+TGG | 0.467142 | 1_2:+62060922 | None:intergenic |
| TGCTGGTATTCCCTTTAATG+AGG | 0.474949 | 1_2:-62063655 | Msa0083070:CDS |
| AGGGTTAGGGGTGCGGCTGA+TGG | 0.477914 | 1_2:+62066043 | None:intergenic |
| TATTACAAGGGTTAGGGGTG+CGG | 0.478734 | 1_2:+62066036 | None:intergenic |
| GTAGATGTTGCATCCTTTGT+GGG | 0.480943 | 1_2:+62063753 | None:intergenic |
| TTCTGATTTGGAACTTCAGA+TGG | 0.484458 | 1_2:+62063885 | None:intergenic |
| AAGGTTCAAAATTACTGTGC+TGG | 0.484913 | 1_2:-62063672 | Msa0083070:CDS |
| AATCATCATTGGTTGAAATA+CGG | 0.485214 | 1_2:+62063811 | None:intergenic |
| AATTCCACATACCTCAGTAT+TGG | 0.485452 | 1_2:+62063101 | None:intergenic |
| AGAGATGCTCGGTGTACTCC+GGG | 0.487036 | 1_2:-62064306 | Msa0083070:CDS |
| AGGGTCTCCTTCTGCGTACA+AGG | 0.490354 | 1_2:+62064439 | None:intergenic |
| AAAGTTAGCTAACTTGCATC+AGG | 0.490897 | 1_2:-62063151 | Msa0083070:CDS |
| ATAGACTTTCCTTAATGGAT+AGG | 0.492112 | 1_2:-62060980 | Msa0083070:three_prime_UTR |
| TGCGGATTTGTAAATTCATA+GGG | 0.493953 | 1_2:+62064677 | None:intergenic |
| GGAAAGCTTACAAGCGTAAG+TGG | 0.494729 | 1_2:-62063936 | Msa0083070:CDS |
| AGAGTTTACATCAGTGCTTA+GGG | 0.496266 | 1_2:-62064015 | Msa0083070:CDS |
| TGTTCGTCCTTCTCATCCCG+TGG | 0.502489 | 1_2:+62063615 | None:intergenic |
| ACAAGCCCAGTCGTGGAAAA+CGG | 0.503942 | 1_2:-62063214 | Msa0083070:CDS |
| AGGAGGCTACAGTCAAGAAA+TGG | 0.504693 | 1_2:-62064486 | Msa0083070:CDS |
| AAATCTGAGACGGTGACGAC+GGG | 0.504966 | 1_2:-62061225 | Msa0083070:CDS |
| GGGTAAAGCTGAATCATCAT+TGG | 0.505790 | 1_2:+62063800 | None:intergenic |
| CCATGAGAAGCAAGGGATGA+AGG | 0.505923 | 1_2:-62061070 | Msa0083070:CDS |
| AAAACTGTTGGTTCTGAACA+AGG | 0.506590 | 1_2:-62064785 | Msa0083070:CDS |
| AGTAGATGTTGCATCCTTTG+TGG | 0.507886 | 1_2:+62063752 | None:intergenic |
| AACACACTGAATACTTTGAA+GGG | 0.509898 | 1_2:-62064398 | Msa0083070:CDS |
| CGTGGCTCCTCAAATACAAA+AGG | 0.515636 | 1_2:-62063855 | Msa0083070:CDS |
| TGATTTGGAACTTCAGATGG+TGG | 0.515862 | 1_2:+62063888 | None:intergenic |
| GCTGTGCTAAGACTAAAATC+TGG | 0.520602 | 1_2:-62061288 | Msa0083070:CDS |
| AAGAAGGTTGTTGATTTAGG+AGG | 0.522918 | 1_2:-62064503 | Msa0083070:CDS |
| TCCGCAAAGCTTCGATTCAG+CGG | 0.523570 | 1_2:-62064660 | Msa0083070:CDS |
| CACAAAACCTGATGCGCACA+TGG | 0.524231 | 1_2:+62061111 | None:intergenic |
| GGCAAGTTATCAACAAGCAC+TGG | 0.524731 | 1_2:-62063259 | Msa0083070:CDS |
| AAGGTACCTGGTTGTGATGA+TGG | 0.526218 | 1_2:+62065927 | None:intergenic |
| GTTAGGGGTGCGGCTGATGG+TGG | 0.527350 | 1_2:+62066046 | None:intergenic |
| GGCCAATAAGAAGGTTATGC+AGG | 0.527394 | 1_2:-62063529 | Msa0083070:CDS |
| TGCTTCAGTTACTGTTAAGG+AGG | 0.527494 | 1_2:+62064274 | None:intergenic |
| TAGAGATGCTCGGTGTACTC+CGG | 0.530161 | 1_2:-62064307 | Msa0083070:CDS |
| GAAGAAATGGATAAAACTGT+TGG | 0.535165 | 1_2:-62064797 | Msa0083070:CDS |
| AGGTGAAGTAATATGGATTG+TGG | 0.535399 | 1_2:+62060492 | None:intergenic |
| TTGGGTATTACAAGGGTTAG+GGG | 0.536017 | 1_2:+62066031 | None:intergenic |
| TTCACTTTGATCTTTGCTCA+AGG | 0.538653 | 1_2:-62065716 | Msa0083070:intron |
| ACTAGCTGCCTTCTTTCTGA+CGG | 0.543071 | 1_2:+62061359 | None:intergenic |
| TGAAGATTGGAAGGATCCTA+TGG | 0.544100 | 1_2:-62064585 | Msa0083070:CDS |
| TCGATGGTGGTCCTACATGA+AGG | 0.545025 | 1_2:+62061042 | None:intergenic |
| GGAGGATGCCGTCAGAAAGA+AGG | 0.545930 | 1_2:-62061367 | Msa0083070:CDS |
| GTCGTTGGCTGAAAAGTCAA+TGG | 0.547386 | 1_2:-62063280 | Msa0083070:CDS |
| GAATGACTGGGCCAATAAGA+AGG | 0.549315 | 1_2:-62063538 | Msa0083070:CDS |
| AGCTGGTGGAAGATTGAAGC+GGG | 0.553151 | 1_2:-62061184 | Msa0083070:CDS |
| GAAGGCAGCTAGTCAACTGC+AGG | 0.553567 | 1_2:-62061349 | Msa0083070:CDS |
| GGCTCCCAAGACAAACCAGC+TGG | 0.554984 | 1_2:-62061201 | Msa0083070:CDS |
| CGAAGATGGTTCCTTAAGTG+TGG | 0.556725 | 1_2:-62064714 | Msa0083070:CDS |
| GTACAAGGACTTCCTTGAAA+CGG | 0.566329 | 1_2:+62064454 | None:intergenic |
| GCTTCAGTTACTGTTAAGGA+GGG | 0.567510 | 1_2:+62064275 | None:intergenic |
| GTTTATCCCACGGGATGAGA+AGG | 0.567819 | 1_2:-62063622 | Msa0083070:CDS |
| AGGAAGTCCTTGTACGCAGA+AGG | 0.568133 | 1_2:-62064446 | Msa0083070:CDS |
| GGCATGAATCCTAAATTCGA+TGG | 0.569361 | 1_2:+62061026 | None:intergenic |
| GTGTGCTCGAGGTTGAAGAT+TGG | 0.571035 | 1_2:-62064598 | Msa0083070:CDS |
| AGCACAAGAATTGCAGGATG+AGG | 0.572239 | 1_2:-62063571 | Msa0083070:CDS |
| CAGAATGAGTATGGAAGAAG+TGG | 0.572958 | 1_2:+62063347 | None:intergenic |
| GCTTGTCAGGTTGTTATGTG+AGG | 0.573085 | 1_2:-62060526 | Msa0083070:three_prime_UTR |
| TAGTCAACTGCAGGAATATG+TGG | 0.573830 | 1_2:-62061340 | Msa0083070:CDS |
| TAGAAGAGAATGCTGAGAAG+AGG | 0.574213 | 1_2:-62063422 | Msa0083070:CDS |
| TTTGGGCAAGTTTATCCCAC+GGG | 0.575708 | 1_2:-62063631 | Msa0083070:CDS |
| AACAGTAACTGAAGCAATGT+GGG | 0.577399 | 1_2:-62064267 | Msa0083070:CDS |
| ATAGCTATTGAAAATTAAGA+GGG | 0.578070 | 1_2:+62060572 | None:intergenic |
| CTGAATACTTTGAAGGGGAA+AGG | 0.578346 | 1_2:-62064392 | Msa0083070:CDS |
| CTTTGGGCAAGTTTATCCCA+CGG | 0.580478 | 1_2:-62063632 | Msa0083070:CDS |
| GTTCGTCCTTCTCATCCCGT+GGG | 0.582182 | 1_2:+62063616 | None:intergenic |
| CACCAACTCTTTCTCTAGCA+AGG | 0.583844 | 1_2:+62063311 | None:intergenic |
| ATGAAAGAACCTAAAGCTTG+TGG | 0.584438 | 1_2:-62063978 | Msa0083070:CDS |
| TATAGTTTGGTAGAGATGCT+CGG | 0.585826 | 1_2:-62064317 | Msa0083070:CDS |
| TCCTATGGCAACTCAGCTTG+AGG | 0.585966 | 1_2:-62064570 | Msa0083070:CDS |
| ACAACATTTGGGTGTGCTCG+AGG | 0.585997 | 1_2:-62064609 | Msa0083070:CDS |
| TGAAGGAATGCCCTTCATGT+AGG | 0.589860 | 1_2:-62061053 | Msa0083070:CDS |
| CTGAACATTTAACTTTGATG+GGG | 0.589971 | 1_2:+62064142 | None:intergenic |
| CAAAATAAGTACTCCATCTG+TGG | 0.591010 | 1_2:-62061262 | Msa0083070:CDS |
| CCAGTCGTGGAAAACGGAGT+TGG | 0.591376 | 1_2:-62063208 | Msa0083070:CDS |
| CAGCATGGTAAAGCTAGAGA+AGG | 0.592676 | 1_2:-62061316 | Msa0083070:CDS |
| GAAATCTGAGACGGTGACGA+CGG | 0.593570 | 1_2:-62061226 | Msa0083070:CDS |
| ATGAGCTCCATGAGAAGCAA+GGG | 0.594437 | 1_2:-62061077 | Msa0083070:CDS |
| CTCACTCACTCAAACACACA+TGG | 0.595985 | 1_2:+62065967 | None:intergenic |
| TAACAACCTGACAAGCCTGC+AGG | 0.597310 | 1_2:+62060533 | None:intergenic |
| TCTGAGACGGTGACGACGGG+GGG | 0.600103 | 1_2:-62061222 | Msa0083070:CDS |
| AACTTTCACAAATATCTCCC+AGG | 0.600719 | 1_2:-62064090 | Msa0083070:CDS |
| ACACGAGTCATTTCACCAGA+AGG | 0.600907 | 1_2:-62064218 | Msa0083070:CDS |
| TAAAGTATGCAGCCTGTGCG+AGG | 0.601463 | 1_2:+62061430 | None:intergenic |
| GTTGGTGTCTGCTAAGTCGT+TGG | 0.602233 | 1_2:-62063295 | Msa0083070:CDS |
| AAGTGGTGCAGTTAGTTCAG+AGG | 0.606670 | 1_2:-62060950 | Msa0083070:three_prime_UTR |
| CTATTCAACAAGCCCAGTCG+TGG | 0.607936 | 1_2:-62063221 | Msa0083070:CDS |
| AAGAAACAAGTGAAATAGAA+CGG | 0.608270 | 1_2:+62060628 | None:intergenic |
| TGTAGACAATATTTGTGAGA+GGG | 0.609208 | 1_2:+62064420 | None:intergenic |
| CGCTGCAAAATTACCCACAA+AGG | 0.609619 | 1_2:-62063766 | Msa0083070:CDS |
| GATTCAGCTTTACCCGAAGG+AGG | 0.610637 | 1_2:-62063792 | Msa0083070:CDS |
| GGATTTGTAAATTCATAGGG+AGG | 0.614022 | 1_2:+62064680 | None:intergenic |
| GTCCTTGCTAGAGAAAGAGT+TGG | 0.614761 | 1_2:-62063313 | Msa0083070:CDS |
| AATGAGCTCCATGAGAAGCA+AGG | 0.618473 | 1_2:-62061078 | Msa0083070:CDS |
| GCTCGAGGTTGAAGATTGGA+AGG | 0.618729 | 1_2:-62064594 | Msa0083070:CDS |
| CTCTGAAGTGGAGAATGCCA+TGG | 0.618759 | 1_2:-62063397 | Msa0083070:CDS |
| GTTAAGAGTGAAGGAAGCAA+CGG | 0.622711 | 1_2:-62066113 | Msa0083070:five_prime_UTR |
| GCAGGAATATGTGGACAGCA+TGG | 0.623496 | 1_2:-62061331 | Msa0083070:CDS |
| TGAGAAGAGGATCTCTGAAG+TGG | 0.625673 | 1_2:-62063409 | Msa0083070:CDS |
| CGATGGTGGTCCTACATGAA+GGG | 0.627258 | 1_2:+62061043 | None:intergenic |
| AGCACTCATGAAAGCTGAGG+AGG | 0.628540 | 1_2:-62061385 | Msa0083070:CDS |
| TCCTCAAGCTGAGTTGCCAT+AGG | 0.629481 | 1_2:+62064569 | None:intergenic |
| TCCCAAGACAAACCAGCTGG+TGG | 0.630501 | 1_2:-62061198 | Msa0083070:CDS |
| GATGATTCAGCTTTACCCGA+AGG | 0.631923 | 1_2:-62063795 | Msa0083070:CDS |
| ATCTGAGACGGTGACGACGG+GGG | 0.633833 | 1_2:-62061223 | Msa0083070:CDS |
| TTCTTCCATACTCATTCTGG+AGG | 0.633921 | 1_2:-62063343 | Msa0083070:CDS |
| ACACACTGAATACTTTGAAG+GGG | 0.634678 | 1_2:-62064397 | Msa0083070:CDS |
| AGAAAACAAGAAATCTGAGA+CGG | 0.635352 | 1_2:-62061235 | Msa0083070:CDS |
| CCTTCACCATCATCACAACC+AGG | 0.635961 | 1_2:-62065933 | Msa0083070:intron |
| ACCTAAAGCTTGTGGCAAAG+CGG | 0.636840 | 1_2:-62063970 | Msa0083070:CDS |
| GTGCCTATCAGAGGAGAGGT+CGG | 0.640007 | 1_2:-62061145 | Msa0083070:CDS |
| TAACAGTAACTGAAGCAATG+TGG | 0.641192 | 1_2:-62064268 | Msa0083070:CDS |
| TGAACATTTAACTTTGATGG+GGG | 0.642090 | 1_2:+62064143 | None:intergenic |
| AGATGGTTCCTTAAGTGTGG+AGG | 0.645854 | 1_2:-62064711 | Msa0083070:CDS |
| TAGATGGAGGTGATAGACAA+GGG | 0.649015 | 1_2:-62064833 | Msa0083070:CDS |
| TTAGTTCAGAGGATTCTCCA+AGG | 0.649177 | 1_2:-62060939 | Msa0083070:three_prime_UTR |
| TGAAGCACTCATGAAAGCTG+AGG | 0.649898 | 1_2:-62061388 | Msa0083070:CDS |
| GATTTGTAAATTCATAGGGA+GGG | 0.650733 | 1_2:+62064681 | None:intergenic |
| AATCTGAGACGGTGACGACG+GGG | 0.653084 | 1_2:-62061224 | Msa0083070:CDS |
| GTAGATGGAGGTGATAGACA+AGG | 0.654637 | 1_2:-62064834 | Msa0083070:intron |
| AATGGATAGGAATCGTGAAG+TGG | 0.657455 | 1_2:-62060967 | Msa0083070:three_prime_UTR |
| GAGTGAAGGAAGCAACGGCA+CGG | 0.658201 | 1_2:-62066108 | Msa0083070:five_prime_UTR |
| ATGAATCCTAAATTCGATGG+TGG | 0.659018 | 1_2:+62061029 | None:intergenic |
| TCATGTGCCTATCAGAGGAG+AGG | 0.661659 | 1_2:-62061149 | Msa0083070:CDS |
| TTGTAGACAATATTTGTGAG+AGG | 0.662345 | 1_2:+62064419 | None:intergenic |
| GGTGCAAAGCTGGAATGACT+GGG | 0.663688 | 1_2:-62063550 | Msa0083070:CDS |
| CAAATAGTAGAGTAGAAACG+GGG | 0.664355 | 1_2:-62066136 | None:intergenic |
| AGGTTGTTATGTGAGGCTCA+AGG | 0.674557 | 1_2:-62060519 | Msa0083070:three_prime_UTR |
| TAAGCTTCGCAAGCTTCAGG+CGG | 0.676302 | 1_2:-62063499 | Msa0083070:CDS |
| AAGCCTGCAGGAACAAAACA+GGG | 0.679743 | 1_2:+62060545 | None:intergenic |
| CCAGAAGGTCAACTGAGTGG+TGG | 0.679750 | 1_2:-62064203 | Msa0083070:CDS |
| TGCATCAGGAGATAGAAAAG+GGG | 0.681951 | 1_2:-62063137 | Msa0083070:CDS |
| ATGTGTAAATTTCATCACAG+CGG | 0.682193 | 1_2:-62060738 | Msa0083070:three_prime_UTR |
| CCTGGTTGTGATGATGGTGA+AGG | 0.689027 | 1_2:+62065933 | None:intergenic |
| TCACCAGAAGGTCAACTGAG+TGG | 0.694120 | 1_2:-62064206 | Msa0083070:CDS |
| GTGTGTCATGTGCCTATCAG+AGG | 0.697894 | 1_2:-62061154 | Msa0083070:CDS |
| CAGCTGGTGGAAGATTGAAG+CGG | 0.698320 | 1_2:-62061185 | Msa0083070:CDS |
| CCAAATCAGAAAATGAAACG+TGG | 0.702226 | 1_2:-62063873 | Msa0083070:CDS |
| GTTCAGAGGATTCTCCAAGG+AGG | 0.719220 | 1_2:-62060936 | Msa0083070:three_prime_UTR |
| AAATCTTCTAGCCAATACTG+AGG | 0.732844 | 1_2:-62063112 | Msa0083070:intron |
| AAATAGTAGAGTAGAAACGG+GGG | 0.747951 | 1_2:-62066135 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAGAAAATAATATAATAAA+TGG | - | chr1_2:62061300-62061319 | Msa0083070:CDS | 10.0% |
| !! | AAATATGAATACAAAAAATT+GGG | + | chr1_2:62061672-62061691 | None:intergenic | 10.0% |
| !! | AAAATATGAATACAAAAAAT+TGG | + | chr1_2:62061673-62061692 | None:intergenic | 10.0% |
| !! | AAAATAAAAATTTGACTATT+CGG | + | chr1_2:62063707-62063726 | None:intergenic | 10.0% |
| !!! | TAAACTTTTTTTTTTTGAAA+CGG | + | chr1_2:62064570-62064589 | None:intergenic | 10.0% |
| !! | TTTCAAAAAAAAAAAGTTTA+TGG | - | chr1_2:62064570-62064589 | Msa0083070:CDS | 10.0% |
| !!! | AAATTTTTTGATTAGTTTAT+TGG | - | chr1_2:62064874-62064893 | Msa0083070:intron | 10.0% |
| !! | AACCTTTAACAAAAAAAATT+GGG | + | chr1_2:62061187-62061206 | None:intergenic | 15.0% |
| !!! | TTTTTAGATTTACATATACA+TGG | - | chr1_2:62063723-62063742 | Msa0083070:CDS | 15.0% |
| !!! | TTTATTAGTTTACATATACA+TGG | - | chr1_2:62063978-62063997 | Msa0083070:CDS | 15.0% |
| !! | AGAAAATGAAAAAGGTAAAA+AGG | + | chr1_2:62060736-62060755 | None:intergenic | 20.0% |
| !! | CAAAAAATGAGAAAAAGTAA+AGG | + | chr1_2:62060943-62060962 | None:intergenic | 20.0% |
| !!! | TTCCCAATTTTTTTTGTTAA+AGG | - | chr1_2:62061182-62061201 | Msa0083070:CDS | 20.0% |
| !! | CAACCTTTAACAAAAAAAAT+TGG | + | chr1_2:62061188-62061207 | None:intergenic | 20.0% |
| !!! | TTATTTTCTCAAATAAGTGT+CGG | + | chr1_2:62061291-62061310 | None:intergenic | 20.0% |
| !! | ACAACCTTTCATAAAAAATT+GGG | + | chr1_2:62061392-62061411 | None:intergenic | 20.0% |
| !! | TACAACCTTTCATAAAAAAT+TGG | + | chr1_2:62061393-62061412 | None:intergenic | 20.0% |
| !! | CAAAAAAAATAACGAACAAA+GGG | + | chr1_2:62061707-62061726 | None:intergenic | 20.0% |
| !! | ACAAAAAAAATAACGAACAA+AGG | + | chr1_2:62061708-62061727 | None:intergenic | 20.0% |
| !!! | ACTTCACAGTTTAATTTTTT+TGG | - | chr1_2:62063959-62063978 | Msa0083070:CDS | 20.0% |
| !!! | CTTCACAGTTTAATTTTTTT+GGG | - | chr1_2:62063960-62063979 | Msa0083070:CDS | 20.0% |
| !!! | TTCACAGTTTAATTTTTTTG+GGG | - | chr1_2:62064216-62064235 | Msa0083070:CDS | 20.0% |
| !! | AAAAAATTACAAGGAGAAAT+CGG | + | chr1_2:62064489-62064508 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTATGGTTTTATG+TGG | - | chr1_2:62064580-62064599 | Msa0083070:CDS | 20.0% |
| !!! | TGATTAGTTTATTGGTTTAT+AGG | - | chr1_2:62064882-62064901 | Msa0083070:intron | 20.0% |
| !!! | TATGATTTCTGTTTTTATGA+TGG | - | chr1_2:62065038-62065057 | Msa0083070:intron | 20.0% |
| !!! | TCTGTTTTATTTCCTATTTT+GGG | + | chr1_2:62065798-62065817 | None:intergenic | 20.0% |
| !!! | TTCTGTTTTATTTCCTATTT+TGG | + | chr1_2:62065799-62065818 | None:intergenic | 20.0% |
| !! | ATAGCTATTGAAAATTAAGA+GGG | + | chr1_2:62066033-62066052 | None:intergenic | 20.0% |
| !! | AATAGCTATTGAAAATTAAG+AGG | + | chr1_2:62066034-62066053 | None:intergenic | 20.0% |
| ! | GAAAAAGGTAAAAAGGAATT+AGG | + | chr1_2:62060729-62060748 | None:intergenic | 25.0% |
| ! | TCTACAAATAAACCACAAAA+GGG | + | chr1_2:62061753-62061772 | None:intergenic | 25.0% |
| ! | ATCTACAAATAAACCACAAA+AGG | + | chr1_2:62061754-62061773 | None:intergenic | 25.0% |
| !! | TTTTGTGGTTTATTTGTAGA+TGG | - | chr1_2:62061753-62061772 | Msa0083070:intron | 25.0% |
| ! | TATTATAATGGCTGAAGAAA+TGG | - | chr1_2:62061792-62061811 | Msa0083070:intron | 25.0% |
| !! | TTTTAGTAATGCTATCAAGA+AGG | - | chr1_2:62062083-62062102 | Msa0083070:intron | 25.0% |
| !! | ACTGAACATTTAACTTTGAT+GGG | + | chr1_2:62062464-62062483 | None:intergenic | 25.0% |
| !! | AATCATCATTGGTTGAAATA+CGG | + | chr1_2:62062794-62062813 | None:intergenic | 25.0% |
| !!! | TTGCTTTTGATTATTTTCCA+TGG | + | chr1_2:62063225-62063244 | None:intergenic | 25.0% |
| ! | TAAAAATTTGACTATTCGGA+AGG | + | chr1_2:62063703-62063722 | None:intergenic | 25.0% |
| !!! | CTGGTTGAATTCATTTTAAT+TGG | + | chr1_2:62063888-62063907 | None:intergenic | 25.0% |
| !!! | CTGGTTGAATTCATTTTAAT+TGG | + | chr1_2:62063888-62063907 | None:intergenic | 25.0% |
| !!! | TTTTCTGTTTCTGTTTTTTG+TGG | - | chr1_2:62064245-62064264 | Msa0083070:CDS | 25.0% |
| ! | ATATATCATCATTTGTCCTA+TGG | + | chr1_2:62064837-62064856 | None:intergenic | 25.0% |
| ! | AGTGTCAATTGTAAACAATT+TGG | + | chr1_2:62065064-62065083 | None:intergenic | 25.0% |
| !! | ATGTTTTCACCATTTAAGTA+AGG | + | chr1_2:62065109-62065128 | None:intergenic | 25.0% |
| ! | TTAAATGGTGAAAACATTAC+AGG | - | chr1_2:62065112-62065131 | Msa0083070:intron | 25.0% |
| ! | TAAATGGTGAAAACATTACA+GGG | - | chr1_2:62065113-62065132 | Msa0083070:intron | 25.0% |
| ! | TAGATATAGACTTTCCTTAA+TGG | - | chr1_2:62065617-62065636 | Msa0083070:intron | 25.0% |
| !!! | CTGTTTTATTTCCTATTTTG+GGG | + | chr1_2:62065797-62065816 | None:intergenic | 25.0% |
| ! | AAGAAACAAGTGAAATAGAA+CGG | + | chr1_2:62065977-62065996 | None:intergenic | 25.0% |
| AAGGAATTAGGAATCGATAA+TGG | + | chr1_2:62060717-62060736 | None:intergenic | 30.0% | |
| GGGTAAAGAGAAAATGAAAA+AGG | + | chr1_2:62060744-62060763 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTTACCCATTTCT+AGG | - | chr1_2:62060750-62060769 | Msa0083070:three_prime_UTR | 30.0% |
| AAGACAAAGAACCTAGAAAT+GGG | + | chr1_2:62060764-62060783 | None:intergenic | 30.0% | |
| AAAGACAAAGAACCTAGAAA+TGG | + | chr1_2:62060765-62060784 | None:intergenic | 30.0% | |
| ! | TTTTCTTTCTCTTTCAACAC+AGG | - | chr1_2:62060840-62060859 | Msa0083070:three_prime_UTR | 30.0% |
| AAAAAGTAAAGGAGCAAGTT+GGG | + | chr1_2:62060932-62060951 | None:intergenic | 30.0% | |
| !! | AGTATTGATGCACAAATCAA+CGG | + | chr1_2:62061223-62061242 | None:intergenic | 30.0% |
| !!! | GGATCCCAATTTTTTATGAA+AGG | - | chr1_2:62061385-62061404 | Msa0083070:CDS | 30.0% |
| ATGAATGAAATCACATGTGT+CGG | - | chr1_2:62061602-62061621 | Msa0083070:intron | 30.0% | |
| !! | GATAGACAAGGGTATTATAA+TGG | - | chr1_2:62061780-62061799 | Msa0083070:intron | 30.0% |
| GAAGAAATGGATAAAACTGT+TGG | - | chr1_2:62061805-62061824 | Msa0083070:intron | 30.0% | |
| GATTTGTAAATTCATAGGGA+GGG | + | chr1_2:62061924-62061943 | None:intergenic | 30.0% | |
| TGCGGATTTGTAAATTCATA+GGG | + | chr1_2:62061928-62061947 | None:intergenic | 30.0% | |
| TTGCGGATTTGTAAATTCAT+AGG | + | chr1_2:62061929-62061948 | None:intergenic | 30.0% | |
| TTGTACAGAAGAACAACATT+TGG | - | chr1_2:62061981-62062000 | Msa0083070:intron | 30.0% | |
| TGTACAGAAGAACAACATTT+GGG | - | chr1_2:62061982-62062001 | Msa0083070:intron | 30.0% | |
| !! | ATCAAGAAGGTTGTTGATTT+AGG | - | chr1_2:62062096-62062115 | Msa0083070:intron | 30.0% |
| TGTAGACAATATTTGTGAGA+GGG | + | chr1_2:62062185-62062204 | None:intergenic | 30.0% | |
| TTGTAGACAATATTTGTGAG+AGG | + | chr1_2:62062186-62062205 | None:intergenic | 30.0% | |
| AACACACTGAATACTTTGAA+GGG | - | chr1_2:62062204-62062223 | Msa0083070:intron | 30.0% | |
| !!! | TTTTGAAATACAAAGTCTGC+AGG | + | chr1_2:62062246-62062265 | None:intergenic | 30.0% |
| ! | TGAACATTTAACTTTGATGG+GGG | + | chr1_2:62062462-62062481 | None:intergenic | 30.0% |
| ! | CTGAACATTTAACTTTGATG+GGG | + | chr1_2:62062463-62062482 | None:intergenic | 30.0% |
| ! | GACTGAACATTTAACTTTGA+TGG | + | chr1_2:62062465-62062484 | None:intergenic | 30.0% |
| AATGTTCAGTCTGATATGAT+TGG | - | chr1_2:62062474-62062493 | Msa0083070:intron | 30.0% | |
| AGATTCTGATTTACTTTCCT+GGG | + | chr1_2:62062532-62062551 | None:intergenic | 30.0% | |
| TAGATTCTGATTTACTTTCC+TGG | + | chr1_2:62062533-62062552 | None:intergenic | 30.0% | |
| ! | ACTAACTCCTTTTGTATTTG+AGG | + | chr1_2:62062757-62062776 | None:intergenic | 30.0% |
| ! | GTAATTTTGAACCTTTTGAG+CGG | + | chr1_2:62062925-62062944 | None:intergenic | 30.0% |
| TACCTACTCTATTATTCTGA+CGG | - | chr1_2:62063616-62063635 | Msa0083070:CDS | 30.0% | |
| !!! | TTTTTTAACAGTGAGACTGA+AGG | + | chr1_2:62063820-62063839 | None:intergenic | 30.0% |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr1_2:62063915-62063934 | Msa0083070:CDS | 30.0% |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr1_2:62063922-62063941 | None:intergenic | 30.0% | |
| ! | ATTTTCCATAGGACAAATGA+TGG | - | chr1_2:62063926-62063945 | Msa0083070:CDS | 30.0% |
| ATATACCATCATTTGTCCTA+TGG | + | chr1_2:62063934-62063953 | None:intergenic | 30.0% | |
| !!! | TTTTTTAACAGTGAGACTGA+AGG | + | chr1_2:62063820-62063839 | None:intergenic | 30.0% |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr1_2:62063915-62063934 | Msa0083070:CDS | 30.0% |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr1_2:62063922-62063941 | None:intergenic | 30.0% | |
| ! | ATTTTCCATAGGACAAATGA+TGG | - | chr1_2:62063926-62063945 | Msa0083070:CDS | 30.0% |
| ATATACCATCATTTGTCCTA+TGG | + | chr1_2:62063934-62063953 | None:intergenic | 30.0% | |
| GGTGGAGAAAAAAAATTACA+AGG | + | chr1_2:62064498-62064517 | None:intergenic | 30.0% | |
| ! | GCTTGTTGGTTAATAATACT+TGG | - | chr1_2:62064544-62064563 | Msa0083070:CDS | 30.0% |
| ATCTGATTGAGCTAAAGTAT+AGG | - | chr1_2:62064614-62064633 | Msa0083070:CDS | 30.0% | |
| CAGTTAGTAATTTATCACTC+AGG | - | chr1_2:62064646-62064665 | Msa0083070:CDS | 30.0% | |
| AAAGTAAAAACAGTATGCAC+AGG | + | chr1_2:62064676-62064695 | None:intergenic | 30.0% | |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr1_2:62063915-62063934 | Msa0083070:CDS | 30.0% |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr1_2:62063922-62063941 | None:intergenic | 30.0% | |
| ATCTGATTGAGCTAAAGTAT+AGG | - | chr1_2:62064614-62064633 | Msa0083070:CDS | 30.0% | |
| TGAGTCAATAATTATCACTC+AGG | - | chr1_2:62064952-62064971 | Msa0083070:intron | 30.0% | |
| AAAGTAAAAACAGTATGCAC+AGG | + | chr1_2:62064676-62064695 | None:intergenic | 30.0% | |
| ! | ATGCTACTTCCTTACTTAAA+TGG | - | chr1_2:62065097-62065116 | Msa0083070:intron | 30.0% |
| AGAAAACAAGAAATCTGAGA+CGG | - | chr1_2:62065367-62065386 | Msa0083070:intron | 30.0% | |
| ! | ATAGACTTTCCTTAATGGAT+AGG | - | chr1_2:62065622-62065641 | Msa0083070:intron | 30.0% |
| ATAAAATGTAGCAGCCATAA+TGG | + | chr1_2:62065714-62065733 | None:intergenic | 30.0% | |
| !! | ATGGCTGCTACATTTTATTT+TGG | - | chr1_2:62065716-62065735 | Msa0083070:intron | 30.0% |
| TTTACACATAACTGTCTCTA+AGG | + | chr1_2:62065853-62065872 | None:intergenic | 30.0% | |
| ATGTGTAAATTTCATCACAG+CGG | - | chr1_2:62065864-62065883 | Msa0083070:intron | 30.0% | |
| !! | GGTGGTATTGGGTTTTTATT+AGG | + | chr1_2:62060541-62060560 | None:intergenic | 35.0% |
| TTTGGGTATTACAAGGGTTA+GGG | + | chr1_2:62060575-62060594 | None:intergenic | 35.0% | |
| !! | TTTTGGGTATTACAAGGGTT+AGG | + | chr1_2:62060576-62060595 | None:intergenic | 35.0% |
| !! | TAGGAATCGATAATGGAGTA+AGG | + | chr1_2:62060710-62060729 | None:intergenic | 35.0% |
| TTCACTTTGATCTTTGCTCA+AGG | - | chr1_2:62060886-62060905 | Msa0083070:three_prime_UTR | 35.0% | |
| GAAAAAGTAAAGGAGCAAGT+TGG | + | chr1_2:62060933-62060952 | None:intergenic | 35.0% | |
| CATAGTTAGGTTTGAGCTAA+GGG | + | chr1_2:62061511-62061530 | None:intergenic | 35.0% | |
| ACATAGTTAGGTTTGAGCTA+AGG | + | chr1_2:62061512-62061531 | None:intergenic | 35.0% | |
| TATGTCAGTGCTACATAGTT+AGG | + | chr1_2:62061524-62061543 | None:intergenic | 35.0% | |
| !!! | TAACTGATTTGACCCTTTTG+TGG | - | chr1_2:62061738-62061757 | Msa0083070:intron | 35.0% |
| TGTGGTTTATTTGTAGATGG+AGG | - | chr1_2:62061756-62061775 | Msa0083070:intron | 35.0% | |
| !! | AAAACTGTTGGTTCTGAACA+AGG | - | chr1_2:62061817-62061836 | Msa0083070:intron | 35.0% |
| AGATGATGAGTCTTCTTCAA+TGG | - | chr1_2:62061861-62061880 | Msa0083070:intron | 35.0% | |
| GGATTTGTAAATTCATAGGG+AGG | + | chr1_2:62061925-62061944 | None:intergenic | 35.0% | |
| GGACTTACTGATGAGTAATT+TGG | - | chr1_2:62062053-62062072 | Msa0083070:intron | 35.0% | |
| !! | AAGAAGGTTGTTGATTTAGG+AGG | - | chr1_2:62062099-62062118 | Msa0083070:intron | 35.0% |
| CAACACACTGAATACTTTGA+AGG | - | chr1_2:62062203-62062222 | Msa0083070:intron | 35.0% | |
| ! | ACACACTGAATACTTTGAAG+GGG | - | chr1_2:62062205-62062224 | Msa0083070:intron | 35.0% |
| GCAGTTACTGCATTATAGTT+TGG | - | chr1_2:62062272-62062291 | Msa0083070:intron | 35.0% | |
| TATAGTTTGGTAGAGATGCT+CGG | - | chr1_2:62062285-62062304 | Msa0083070:intron | 35.0% | |
| CATTGCTTCAGTTACTGTTA+AGG | + | chr1_2:62062334-62062353 | None:intergenic | 35.0% | |
| TAACAGTAACTGAAGCAATG+TGG | - | chr1_2:62062334-62062353 | Msa0083070:intron | 35.0% | |
| AACAGTAACTGAAGCAATGT+GGG | - | chr1_2:62062335-62062354 | Msa0083070:intron | 35.0% | |
| AACTTTCACAAATATCTCCC+AGG | - | chr1_2:62062512-62062531 | Msa0083070:intron | 35.0% | |
| ! | GCACTGATGTAAACTCTTTA+TGG | + | chr1_2:62062584-62062603 | None:intergenic | 35.0% |
| AAGAGTTTACATCAGTGCTT+AGG | - | chr1_2:62062586-62062605 | Msa0083070:intron | 35.0% | |
| AGAGTTTACATCAGTGCTTA+GGG | - | chr1_2:62062587-62062606 | Msa0083070:intron | 35.0% | |
| ATGAAAGAACCTAAAGCTTG+TGG | - | chr1_2:62062624-62062643 | Msa0083070:intron | 35.0% | |
| !! | TTCTGATTTGGAACTTCAGA+TGG | + | chr1_2:62062720-62062739 | None:intergenic | 35.0% |
| ! | CCACGTTTCATTTTCTGATT+TGG | + | chr1_2:62062732-62062751 | None:intergenic | 35.0% |
| CCAAATCAGAAAATGAAACG+TGG | - | chr1_2:62062729-62062748 | Msa0083070:intron | 35.0% | |
| ACAAAAGGAGTTAGTATAGC+AGG | - | chr1_2:62062762-62062781 | Msa0083070:intron | 35.0% | |
| !!! | GAATGGCTTAGGTTTTGATT+TGG | + | chr1_2:62062895-62062914 | None:intergenic | 35.0% |
| AAGGTTCAAAATTACTGTGC+TGG | - | chr1_2:62062930-62062949 | Msa0083070:intron | 35.0% | |
| TATTCCCTTTAATGAGGCTT+TGG | - | chr1_2:62062953-62062972 | Msa0083070:intron | 35.0% | |
| ATTCCCTTTAATGAGGCTTT+GGG | - | chr1_2:62062954-62062973 | Msa0083070:intron | 35.0% | |
| TACCTGCATAACCTTCTTAT+TGG | + | chr1_2:62063078-62063097 | None:intergenic | 35.0% | |
| ! | AAAGTTAGCTAACTTGCATC+AGG | - | chr1_2:62063451-62063470 | Msa0083070:CDS | 35.0% |
| TTGCATCAGGAGATAGAAAA+GGG | - | chr1_2:62063464-62063483 | Msa0083070:CDS | 35.0% | |
| AAATCTTCTAGCCAATACTG+AGG | - | chr1_2:62063490-62063509 | Msa0083070:CDS | 35.0% | |
| AATTCCACATACCTCAGTAT+TGG | + | chr1_2:62063504-62063523 | None:intergenic | 35.0% | |
| GTCAGAATAATAGAGTAGGT+AGG | + | chr1_2:62063617-62063636 | None:intergenic | 35.0% | |
| ATAGGCACCTAAAAAAGACA+TGG | - | chr1_2:62063663-62063682 | Msa0083070:CDS | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr1_2:62063907-62063926 | None:intergenic | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr1_2:62063907-62063926 | None:intergenic | 35.0% | |
| !!! | GTTTAATTTTTTTGGGGTGC+TGG | - | chr1_2:62064222-62064241 | Msa0083070:CDS | 35.0% |
| !! | GGTTGCTAGTTCTTTTCTTA+GGG | - | chr1_2:62064417-62064436 | Msa0083070:CDS | 35.0% |
| !! | GTTGCTAGTTCTTTTCTTAG+GGG | - | chr1_2:62064418-62064437 | Msa0083070:CDS | 35.0% |
| !!! | TTCTTAGGGGTGGTTTTTTA+AGG | - | chr1_2:62064431-62064450 | Msa0083070:CDS | 35.0% |
| !!! | TCTTAGGGGTGGTTTTTTAA+GGG | - | chr1_2:62064432-62064451 | Msa0083070:CDS | 35.0% |
| TGAGCTAAAGTATAGGAACA+AGG | - | chr1_2:62064621-62064640 | Msa0083070:CDS | 35.0% | |
| ATGAGTTAAACACTCATGGT+TGG | + | chr1_2:62064753-62064772 | None:intergenic | 35.0% | |
| ACCATGAGTGTTTAACTCAT+AGG | - | chr1_2:62064753-62064772 | Msa0083070:CDS | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr1_2:62063907-62063926 | None:intergenic | 35.0% | |
| TTGAGCTAAAGTATAGGAAC+AGG | - | chr1_2:62064620-62064639 | Msa0083070:CDS | 35.0% | |
| TGAGCTAAAGTATAGGAACA+GGG | - | chr1_2:62064621-62064640 | Msa0083070:CDS | 35.0% | |
| ATTACAGGGTAGAGTGAAAA+AGG | - | chr1_2:62065127-62065146 | Msa0083070:intron | 35.0% | |
| !! | CACAGATGGAGTACTTATTT+TGG | + | chr1_2:62065342-62065361 | None:intergenic | 35.0% |
| CAAAATAAGTACTCCATCTG+TGG | - | chr1_2:62065340-62065359 | Msa0083070:intron | 35.0% | |
| ! | TTGTTTTCTTTCACCACAGA+TGG | + | chr1_2:62065356-62065375 | None:intergenic | 35.0% |
| ATGAATCCTAAATTCGATGG+TGG | + | chr1_2:62065576-62065595 | None:intergenic | 35.0% | |
| AGGATTCATGCCAAATTTCT+TGG | - | chr1_2:62065587-62065606 | Msa0083070:intron | 35.0% | |
| GGATTCATGCCAAATTTCTT+GGG | - | chr1_2:62065588-62065607 | Msa0083070:intron | 35.0% | |
| TTCACGATTCCTATCCATTA+AGG | + | chr1_2:62065634-62065653 | None:intergenic | 35.0% | |
| GAAGGTCATTTACACCATTA+TGG | - | chr1_2:62065697-62065716 | Msa0083070:intron | 35.0% | |
| !!! | ATTTCCTATTTTGGGGTGAA+GGG | + | chr1_2:62065790-62065809 | None:intergenic | 35.0% |
| !!! | TATTTCCTATTTTGGGGTGA+AGG | + | chr1_2:62065791-62065810 | None:intergenic | 35.0% |
| AATAGCACAGAGAAACTTGA+TGG | - | chr1_2:62065892-62065911 | Msa0083070:intron | 35.0% | |
| !! | ACTTGTTTCTTTTTACTCGC+TGG | - | chr1_2:62065986-62066005 | Msa0083070:five_prime_UTR | 35.0% |
| !! | CTTGTTTCTTTTTACTCGCT+GGG | - | chr1_2:62065987-62066006 | Msa0083070:five_prime_UTR | 35.0% |
| ! | AGGTGAAGTAATATGGATTG+TGG | + | chr1_2:62066113-62066132 | None:intergenic | 35.0% |
| CACTTCAAGGTGAAGTAATA+TGG | + | chr1_2:62066120-62066139 | None:intergenic | 35.0% | |
| GTTAAGAGTGAAGGAAGCAA+CGG | - | chr1_2:62060489-62060508 | Msa0083070:three_prime_UTR | 40.0% | |
| TTGGGTATTACAAGGGTTAG+GGG | + | chr1_2:62060574-62060593 | None:intergenic | 40.0% | |
| !!! | GTGGGTTTTGGGTATTACAA+GGG | + | chr1_2:62060581-62060600 | None:intergenic | 40.0% |
| !!! | TGTGGGTTTTGGGTATTACA+AGG | + | chr1_2:62060582-62060601 | None:intergenic | 40.0% |
| TGGAGTAAGGAACGAAATGA+AGG | + | chr1_2:62060697-62060716 | None:intergenic | 40.0% | |
| CTTCTGATCAAAGACGTTTC+AGG | + | chr1_2:62061147-62061166 | None:intergenic | 40.0% | |
| ! | ACGTCTTTGATCAGAAGTGT+CGG | - | chr1_2:62061150-62061169 | Msa0083070:CDS | 40.0% |
| TAGTCGATGTGTGAGTGTTA+TGG | + | chr1_2:62061561-62061580 | None:intergenic | 40.0% | |
| ! | ACGTATTCGATCAGAAGTGT+CGG | - | chr1_2:62061633-62061652 | Msa0083070:intron | 40.0% |
| TAGATGGAGGTGATAGACAA+GGG | - | chr1_2:62061769-62061788 | Msa0083070:intron | 40.0% | |
| TCTTCAATGGTTACCGAAGA+TGG | - | chr1_2:62061874-62061893 | Msa0083070:intron | 40.0% | |
| CACACTTAAGGAACCATCTT+CGG | + | chr1_2:62061890-62061909 | None:intergenic | 40.0% | |
| GAAATCATCCTCCACACTTA+AGG | + | chr1_2:62061902-62061921 | None:intergenic | 40.0% | |
| TGAAGATTGGAAGGATCCTA+TGG | - | chr1_2:62062017-62062036 | Msa0083070:intron | 40.0% | |
| CAGTCAAGAAATGGCTGAAA+TGG | - | chr1_2:62062125-62062144 | Msa0083070:intron | 40.0% | |
| GTACAAGGACTTCCTTGAAA+CGG | + | chr1_2:62062151-62062170 | None:intergenic | 40.0% | |
| ! | CTGAATACTTTGAAGGGGAA+AGG | - | chr1_2:62062210-62062229 | Msa0083070:intron | 40.0% |
| !!! | TTAAGGAGGGTTTTAGTTCC+CGG | + | chr1_2:62062317-62062336 | None:intergenic | 40.0% |
| GCTTCAGTTACTGTTAAGGA+GGG | + | chr1_2:62062330-62062349 | None:intergenic | 40.0% | |
| TGCTTCAGTTACTGTTAAGG+AGG | + | chr1_2:62062331-62062350 | None:intergenic | 40.0% | |
| ! | TGATTTGGAACTTCAGATGG+TGG | + | chr1_2:62062717-62062736 | None:intergenic | 40.0% |
| GGGTAAAGCTGAATCATCAT+TGG | + | chr1_2:62062805-62062824 | None:intergenic | 40.0% | |
| GTAGATGTTGCATCCTTTGT+GGG | + | chr1_2:62062852-62062871 | None:intergenic | 40.0% | |
| AGTAGATGTTGCATCCTTTG+TGG | + | chr1_2:62062853-62062872 | None:intergenic | 40.0% | |
| !! | GATTTGGCTGTTTTCACTGT+TGG | + | chr1_2:62062879-62062898 | None:intergenic | 40.0% |
| TGCTGGTATTCCCTTTAATG+AGG | - | chr1_2:62062947-62062966 | Msa0083070:intron | 40.0% | |
| TTGCCCAAAGCCTCATTAAA+GGG | + | chr1_2:62062960-62062979 | None:intergenic | 40.0% | |
| TAGAAGAGAATGCTGAGAAG+AGG | - | chr1_2:62063180-62063199 | Msa0083070:CDS | 40.0% | |
| CAGAATGAGTATGGAAGAAG+TGG | + | chr1_2:62063258-62063277 | None:intergenic | 40.0% | |
| CACTTCTTCCATACTCATTC+TGG | - | chr1_2:62063256-62063275 | Msa0083070:CDS | 40.0% | |
| TTCTTCCATACTCATTCTGG+AGG | - | chr1_2:62063259-62063278 | Msa0083070:CDS | 40.0% | |
| CTTGCATCAGGAGATAGAAA+AGG | - | chr1_2:62063463-62063482 | Msa0083070:CDS | 40.0% | |
| TGCATCAGGAGATAGAAAAG+GGG | - | chr1_2:62063465-62063484 | Msa0083070:CDS | 40.0% | |
| TAGGTAGGTACTCAAGATAC+GGG | + | chr1_2:62063602-62063621 | None:intergenic | 40.0% | |
| GTAGGTAGGTACTCAAGATA+CGG | + | chr1_2:62063603-62063622 | None:intergenic | 40.0% | |
| GACCGTCAGAATAATAGAGT+AGG | + | chr1_2:62063621-62063640 | None:intergenic | 40.0% | |
| !!! | GAAGTCGCCATGTCTTTTTT+AGG | + | chr1_2:62063673-62063692 | None:intergenic | 40.0% |
| TCACCTATGTTTGCAGTACA+CGG | + | chr1_2:62063762-62063781 | None:intergenic | 40.0% | |
| TCACCTATGTTTGCAGTACA+CGG | + | chr1_2:62063762-62063781 | None:intergenic | 40.0% | |
| !!! | TGGAGAGAGCAGTTTTGTTT+CGG | - | chr1_2:62064265-62064284 | Msa0083070:CDS | 40.0% |
| !!! | TCAGCAGTTTTGCTGTTTTC+TGG | - | chr1_2:62064310-62064329 | Msa0083070:CDS | 40.0% |
| ACAGAAGCAATCAGCAACTA+AGG | + | chr1_2:62064348-62064367 | None:intergenic | 40.0% | |
| ! | TTAGTTGCTGATTGCTTCTG+TGG | - | chr1_2:62064347-62064366 | Msa0083070:CDS | 40.0% |
| ! | GTTTTGTGTGTAGTGACTGT+TGG | - | chr1_2:62064369-62064388 | Msa0083070:CDS | 40.0% |
| !! | GGGTTGCTAGTTCTTTTCTT+AGG | - | chr1_2:62064416-62064435 | Msa0083070:CDS | 40.0% |
| !!! | CTTAGGGGTGGTTTTTTAAG+GGG | - | chr1_2:62064433-62064452 | Msa0083070:CDS | 40.0% |
| GCCTATGAGTTAAACACTCA+TGG | + | chr1_2:62064757-62064776 | None:intergenic | 40.0% | |
| TAGTCAACTGCAGGAATATG+TGG | - | chr1_2:62065262-62065281 | Msa0083070:intron | 40.0% | |
| GCTGTGCTAAGACTAAAATC+TGG | - | chr1_2:62065314-62065333 | Msa0083070:intron | 40.0% | |
| TCATGGAGCTCATTGCAATT+CGG | + | chr1_2:62065518-62065537 | None:intergenic | 40.0% | |
| GGCATGAATCCTAAATTCGA+TGG | + | chr1_2:62065579-62065598 | None:intergenic | 40.0% | |
| AATGGATAGGAATCGTGAAG+TGG | - | chr1_2:62065635-62065654 | Msa0083070:intron | 40.0% | |
| TTAGTTCAGAGGATTCTCCA+AGG | - | chr1_2:62065663-62065682 | Msa0083070:intron | 40.0% | |
| ! | TCCAAGGAGGTTCATTTTGA+AGG | - | chr1_2:62065679-62065698 | Msa0083070:intron | 40.0% |
| ACCTTCAAAATGAACCTCCT+TGG | + | chr1_2:62065683-62065702 | None:intergenic | 40.0% | |
| ! | TTTTTACTCGCTGGGTTGTT+TGG | - | chr1_2:62065995-62066014 | Msa0083070:five_prime_UTR | 40.0% |
| ! | TTTTACTCGCTGGGTTGTTT+GGG | - | chr1_2:62065996-62066015 | Msa0083070:five_prime_UTR | 40.0% |
| TATTACAAGGGTTAGGGGTG+CGG | + | chr1_2:62060569-62060588 | None:intergenic | 45.0% | |
| ! | GTGTTTTCGTCTTTCGCTGT+GGG | + | chr1_2:62060599-62060618 | None:intergenic | 45.0% |
| ! | TGTGTTTTCGTCTTTCGCTG+TGG | + | chr1_2:62060600-62060619 | None:intergenic | 45.0% |
| CTCACTCACTCAAACACACA+TGG | + | chr1_2:62060638-62060657 | None:intergenic | 45.0% | |
| ! | AAGGTACCTGGTTGTGATGA+TGG | + | chr1_2:62060678-62060697 | None:intergenic | 45.0% |
| !! | AGGAACGAAATGAAGGTACC+TGG | + | chr1_2:62060690-62060709 | None:intergenic | 45.0% |
| CGTAGTTGGGAACACAGTAA+TGG | + | chr1_2:62061003-62061022 | None:intergenic | 45.0% | |
| GAAACCACATGTGTCAGTGT+CGG | - | chr1_2:62061100-62061119 | Msa0083070:CDS | 45.0% | |
| !! | ATCAGAAGTGTCGGTTACAG+AGG | - | chr1_2:62061159-62061178 | Msa0083070:CDS | 45.0% |
| TGTGTCAGTGCTGCATAGTT+GGG | + | chr1_2:62061251-62061270 | None:intergenic | 45.0% | |
| !! | ATCAGAAGTGTCAGTGCTAC+AGG | - | chr1_2:62061362-62061381 | Msa0083070:CDS | 45.0% |
| !! | TCAGAAGTGTCAGTGCTACA+GGG | - | chr1_2:62061363-62061382 | Msa0083070:CDS | 45.0% |
| TAAGGGACTAAAGGAGTTGG+GGG | + | chr1_2:62061494-62061513 | None:intergenic | 45.0% | |
| CTAAGGGACTAAAGGAGTTG+GGG | + | chr1_2:62061495-62061514 | None:intergenic | 45.0% | |
| GCTAAGGGACTAAAGGAGTT+GGG | + | chr1_2:62061496-62061515 | None:intergenic | 45.0% | |
| AGCTAAGGGACTAAAGGAGT+TGG | + | chr1_2:62061497-62061516 | None:intergenic | 45.0% | |
| GGTTTGAGCTAAGGGACTAA+AGG | + | chr1_2:62061503-62061522 | None:intergenic | 45.0% | |
| CGATGTGTGAGTGTTATGGT+CGG | + | chr1_2:62061557-62061576 | None:intergenic | 45.0% | |
| GTAGATGGAGGTGATAGACA+AGG | - | chr1_2:62061768-62061787 | Msa0083070:intron | 45.0% | |
| CGAAGATGGTTCCTTAAGTG+TGG | - | chr1_2:62061888-62061907 | Msa0083070:intron | 45.0% | |
| AGATGGTTCCTTAAGTGTGG+AGG | - | chr1_2:62061891-62061910 | Msa0083070:intron | 45.0% | |
| AGCTTCGATTCAGCGGAATT+AGG | - | chr1_2:62061949-62061968 | Msa0083070:intron | 45.0% | |
| GCTTCGATTCAGCGGAATTA+GGG | - | chr1_2:62061950-62061969 | Msa0083070:intron | 45.0% | |
| GATTCAGCGGAATTAGGGTT+AGG | - | chr1_2:62061955-62061974 | Msa0083070:intron | 45.0% | |
| AGGAGGCTACAGTCAAGAAA+TGG | - | chr1_2:62062116-62062135 | Msa0083070:intron | 45.0% | |
| ACACGAGTCATTTCACCAGA+AGG | - | chr1_2:62062384-62062403 | Msa0083070:intron | 45.0% | |
| ACCTAAAGCTTGTGGCAAAG+CGG | - | chr1_2:62062632-62062651 | Msa0083070:intron | 45.0% | |
| GGCAAAGCGGGTGTTAAATT+AGG | - | chr1_2:62062645-62062664 | Msa0083070:intron | 45.0% | |
| GGAAAGCTTACAAGCGTAAG+TGG | - | chr1_2:62062666-62062685 | Msa0083070:intron | 45.0% | |
| CGTGGCTCCTCAAATACAAA+AGG | - | chr1_2:62062747-62062766 | Msa0083070:intron | 45.0% | |
| GATGATTCAGCTTTACCCGA+AGG | - | chr1_2:62062807-62062826 | Msa0083070:intron | 45.0% | |
| CGCTGCAAAATTACCCACAA+AGG | - | chr1_2:62062836-62062855 | Msa0083070:intron | 45.0% | |
| ! | TTTTGAGCGGAAGAGGAGAA+TGG | + | chr1_2:62062912-62062931 | None:intergenic | 45.0% |
| ATTCTCCTCTTCCGCTCAAA+AGG | - | chr1_2:62062911-62062930 | Msa0083070:intron | 45.0% | |
| ! | TTGAACCTTTTGAGCGGAAG+AGG | + | chr1_2:62062919-62062938 | None:intergenic | 45.0% |
| CTTGCCCAAAGCCTCATTAA+AGG | + | chr1_2:62062961-62062980 | None:intergenic | 45.0% | |
| CTTTGGGCAAGTTTATCCCA+CGG | - | chr1_2:62062970-62062989 | Msa0083070:intron | 45.0% | |
| TTTGGGCAAGTTTATCCCAC+GGG | - | chr1_2:62062971-62062990 | Msa0083070:intron | 45.0% | |
| ATCTCGAGCACAAGAATTGC+AGG | - | chr1_2:62063025-62063044 | Msa0083070:intron | 45.0% | |
| AGCACAAGAATTGCAGGATG+AGG | - | chr1_2:62063031-62063050 | Msa0083070:intron | 45.0% | |
| GAATGACTGGGCCAATAAGA+AGG | - | chr1_2:62063064-62063083 | Msa0083070:intron | 45.0% | |
| GGCCAATAAGAAGGTTATGC+AGG | - | chr1_2:62063073-62063092 | Msa0083070:intron | 45.0% | |
| AGATAAGCTTCGCAAGCTTC+AGG | - | chr1_2:62063100-62063119 | Msa0083070:intron | 45.0% | |
| ! | TGAGAAGAGGATCTCTGAAG+TGG | - | chr1_2:62063193-62063212 | Msa0083070:CDS | 45.0% |
| CTTTGCCTCCAGAATGAGTA+TGG | + | chr1_2:62063267-62063286 | None:intergenic | 45.0% | |
| GTCCTTGCTAGAGAAAGAGT+TGG | - | chr1_2:62063289-62063308 | Msa0083070:CDS | 45.0% | |
| CACCAACTCTTTCTCTAGCA+AGG | + | chr1_2:62063294-62063313 | None:intergenic | 45.0% | |
| ! | GTCGTTGGCTGAAAAGTCAA+TGG | - | chr1_2:62063322-62063341 | Msa0083070:CDS | 45.0% |
| GGCAAGTTATCAACAAGCAC+TGG | - | chr1_2:62063343-62063362 | Msa0083070:CDS | 45.0% | |
| CTAGCCAATACTGAGGTATG+TGG | - | chr1_2:62063497-62063516 | Msa0083070:CDS | 45.0% | |
| TAGCCGTGTACTGCAAACAT+AGG | - | chr1_2:62063756-62063775 | Msa0083070:CDS | 45.0% | |
| GCAAACATAGGTGAGATGAG+CGG | - | chr1_2:62063768-62063787 | Msa0083070:CDS | 45.0% | |
| TAGCCGTGTACTGCAAACAT+AGG | - | chr1_2:62063756-62063775 | Msa0083070:CDS | 45.0% | |
| GCAAACATAGGTGAGATGAG+CGG | - | chr1_2:62063768-62063787 | Msa0083070:CDS | 45.0% | |
| !!! | AGAGCAGTTTTGTTTCGGTG+TGG | - | chr1_2:62064270-62064289 | Msa0083070:CDS | 45.0% |
| !! | TTTTGTTTCGGTGTGGTGCT+GGG | - | chr1_2:62064277-62064296 | Msa0083070:CDS | 45.0% |
| GCAAAACTGCTGACCGAAAA+AGG | + | chr1_2:62064303-62064322 | None:intergenic | 45.0% | |
| ! | AGTGACTGTTGGAGCTTTGT+TGG | - | chr1_2:62064380-62064399 | Msa0083070:CDS | 45.0% |
| !! | ACTGTTGGAGCTTTGTTGGT+TGG | - | chr1_2:62064384-62064403 | Msa0083070:CDS | 45.0% |
| !! | TTTGTTGGTTGGTAGTCCAG+TGG | - | chr1_2:62064395-62064414 | Msa0083070:CDS | 45.0% |
| !! | TTGTTGGTTGGTAGTCCAGT+GGG | - | chr1_2:62064396-62064415 | Msa0083070:CDS | 45.0% |
| GAAAAGAACTAGCAACCCAC+TGG | + | chr1_2:62064414-62064433 | None:intergenic | 45.0% | |
| !! | GCTAGTTCTTTTCTTAGGGG+TGG | - | chr1_2:62064421-62064440 | Msa0083070:CDS | 45.0% |
| ! | TAAGGGGTTTTTGTTCGAGC+CGG | - | chr1_2:62064449-62064468 | Msa0083070:CDS | 45.0% |
| CAAGGCGCACTAATAAGCTT+GGG | + | chr1_2:62064519-62064538 | None:intergenic | 45.0% | |
| GACAGAAAAAATCCTCGCAC+AGG | - | chr1_2:62065160-62065179 | Msa0083070:intron | 45.0% | |
| ! | TGAAGCACTCATGAAAGCTG+AGG | - | chr1_2:62065214-62065233 | Msa0083070:intron | 45.0% |
| ACTAGCTGCCTTCTTTCTGA+CGG | + | chr1_2:62065246-62065265 | None:intergenic | 45.0% | |
| CAGCATGGTAAAGCTAGAGA+AGG | - | chr1_2:62065286-62065305 | Msa0083070:intron | 45.0% | |
| AATGAGCTCCATGAGAAGCA+AGG | - | chr1_2:62065524-62065543 | Msa0083070:intron | 45.0% | |
| ATGAGCTCCATGAGAAGCAA+GGG | - | chr1_2:62065525-62065544 | Msa0083070:intron | 45.0% | |
| TGAAGGAATGCCCTTCATGT+AGG | - | chr1_2:62065549-62065568 | Msa0083070:intron | 45.0% | |
| GTAGGACCACCATCGAATTT+AGG | - | chr1_2:62065567-62065586 | Msa0083070:intron | 45.0% | |
| CTACTGCTGCCCAAGAAATT+TGG | + | chr1_2:62065600-62065619 | None:intergenic | 45.0% | |
| AAGTGGTGCAGTTAGTTCAG+AGG | - | chr1_2:62065652-62065671 | Msa0083070:intron | 45.0% | |
| !! | TATCCCTGTTTTGTTCCTGC+AGG | - | chr1_2:62066054-62066073 | Msa0083070:five_prime_UTR | 45.0% |
| AAGCCTGCAGGAACAAAACA+GGG | + | chr1_2:62066060-62066079 | None:intergenic | 45.0% | |
| ! | GCTTGTCAGGTTGTTATGTG+AGG | - | chr1_2:62066076-62066095 | Msa0083070:five_prime_UTR | 45.0% |
| AGGTTGTTATGTGAGGCTCA+AGG | - | chr1_2:62066083-62066102 | Msa0083070:five_prime_UTR | 45.0% | |
| GAAACGGGGGTTAAGAGTGA+AGG | - | chr1_2:62060480-62060499 | Msa0083070:three_prime_UTR | 50.0% | |
| ! | CGTCTTTCGCTGTGGGTTTT+GGG | + | chr1_2:62060592-62060611 | None:intergenic | 50.0% |
| ! | TCGTCTTTCGCTGTGGGTTT+TGG | + | chr1_2:62060593-62060612 | None:intergenic | 50.0% |
| !! | CCTGGTTGTGATGATGGTGA+AGG | + | chr1_2:62060672-62060691 | None:intergenic | 50.0% |
| CCTTCACCATCATCACAACC+AGG | - | chr1_2:62060669-62060688 | Msa0083070:three_prime_UTR | 50.0% | |
| TGTTCCCAACTACGTAGCAC+TGG | - | chr1_2:62061009-62061028 | Msa0083070:CDS | 50.0% | |
| TGTGCCAGTGCTACGTAGTT+GGG | + | chr1_2:62061016-62061035 | None:intergenic | 50.0% | |
| ACTGGCACAGACATGAACAC+CGG | - | chr1_2:62061027-62061046 | Msa0083070:CDS | 50.0% | |
| GTCGATGTGTGTGTCATGTC+CGG | + | chr1_2:62061049-62061068 | None:intergenic | 50.0% | |
| GTCGGACACTTGACACATGT+CGG | - | chr1_2:62061118-62061137 | Msa0083070:CDS | 50.0% | |
| CTGTGTCAGTGCTGCATAGT+TGG | + | chr1_2:62061252-62061271 | None:intergenic | 50.0% | |
| !! | ATGCAGCACTGACACAGACA+CGG | - | chr1_2:62061255-62061274 | Msa0083070:CDS | 50.0% |
| GGAATCACATGTGTCTGCGT+CGG | - | chr1_2:62061321-62061340 | Msa0083070:CDS | 50.0% | |
| !! | CAGAAGTGTCAGTGCTACAG+GGG | - | chr1_2:62061364-62061383 | Msa0083070:CDS | 50.0% |
| AGTTGGGGGGTTAAAGTACG+AGG | + | chr1_2:62061480-62061499 | None:intergenic | 50.0% | |
| AAGGGACTAAAGGAGTTGGG+GGG | + | chr1_2:62061493-62061512 | None:intergenic | 50.0% | |
| !! | CAGAAGTGTCGGTGCTATAG+AGG | - | chr1_2:62061644-62061663 | Msa0083070:intron | 50.0% |
| TCCGCAAAGCTTCGATTCAG+CGG | - | chr1_2:62061942-62061961 | Msa0083070:intron | 50.0% | |
| TCCGCTGAATCGAAGCTTTG+CGG | + | chr1_2:62061946-62061965 | None:intergenic | 50.0% | |
| ACAACATTTGGGTGTGCTCG+AGG | - | chr1_2:62061993-62062012 | Msa0083070:intron | 50.0% | |
| GTGTGCTCGAGGTTGAAGAT+TGG | - | chr1_2:62062004-62062023 | Msa0083070:intron | 50.0% | |
| GCTCGAGGTTGAAGATTGGA+AGG | - | chr1_2:62062008-62062027 | Msa0083070:intron | 50.0% | |
| TCCTATGGCAACTCAGCTTG+AGG | - | chr1_2:62062032-62062051 | Msa0083070:intron | 50.0% | |
| TCCTCAAGCTGAGTTGCCAT+AGG | + | chr1_2:62062036-62062055 | None:intergenic | 50.0% | |
| TGGCTGAAATGGCCGTTTCA+AGG | - | chr1_2:62062136-62062155 | Msa0083070:intron | 50.0% | |
| AGGAAGTCCTTGTACGCAGA+AGG | - | chr1_2:62062156-62062175 | Msa0083070:intron | 50.0% | |
| !! | TAGAGATGCTCGGTGTACTC+CGG | - | chr1_2:62062295-62062314 | Msa0083070:intron | 50.0% |
| TGAAGCAATGTGGGAGTTGC+TGG | - | chr1_2:62062344-62062363 | Msa0083070:intron | 50.0% | |
| TCACCAGAAGGTCAACTGAG+TGG | - | chr1_2:62062396-62062415 | Msa0083070:intron | 50.0% | |
| CCTAAAGCTTGTGGCAAAGC+GGG | - | chr1_2:62062633-62062652 | Msa0083070:intron | 50.0% | |
| GATTCAGCTTTACCCGAAGG+AGG | - | chr1_2:62062810-62062829 | Msa0083070:intron | 50.0% | |
| ! | TTTTGCAGCGCTACCTCCTT+CGG | + | chr1_2:62062826-62062845 | None:intergenic | 50.0% |
| GTTTATCCCACGGGATGAGA+AGG | - | chr1_2:62062980-62062999 | Msa0083070:intron | 50.0% | |
| AGGTGCAAAGCTGGAATGAC+TGG | - | chr1_2:62063051-62063070 | Msa0083070:intron | 50.0% | |
| GGTGCAAAGCTGGAATGACT+GGG | - | chr1_2:62063052-62063071 | Msa0083070:intron | 50.0% | |
| TAAGCTTCGCAAGCTTCAGG+CGG | - | chr1_2:62063103-62063122 | Msa0083070:intron | 50.0% | |
| !! | CTCTGAAGTGGAGAATGCCA+TGG | - | chr1_2:62063205-62063224 | Msa0083070:CDS | 50.0% |
| ! | GTTGGTGTCTGCTAAGTCGT+TGG | - | chr1_2:62063307-62063326 | Msa0083070:CDS | 50.0% |
| CTATTCAACAAGCCCAGTCG+TGG | - | chr1_2:62063381-62063400 | Msa0083070:CDS | 50.0% | |
| ACAAGCCCAGTCGTGGAAAA+CGG | - | chr1_2:62063388-62063407 | Msa0083070:CDS | 50.0% | |
| ! | CAACTCCGTTTTCCACGACT+GGG | + | chr1_2:62063396-62063415 | None:intergenic | 50.0% |
| TAGGTGCCTATGCATGTCCA+GGG | + | chr1_2:62063654-62063673 | None:intergenic | 50.0% | |
| TTAGGTGCCTATGCATGTCC+AGG | + | chr1_2:62063655-62063674 | None:intergenic | 50.0% | |
| !!! | GTTTTGTTTCGGTGTGGTGC+TGG | - | chr1_2:62064276-62064295 | Msa0083070:CDS | 50.0% |
| !!! | TGCTGTTTTCTGGTCTGCTG+CGG | - | chr1_2:62064320-62064339 | Msa0083070:CDS | 50.0% |
| GCAAGGCGCACTAATAAGCT+TGG | + | chr1_2:62064520-62064539 | None:intergenic | 50.0% | |
| GCTTATTAGTGCGCCTTGCA+CGG | - | chr1_2:62064521-62064540 | Msa0083070:CDS | 50.0% | |
| CTTATTAGTGCGCCTTGCAC+GGG | - | chr1_2:62064522-62064541 | Msa0083070:CDS | 50.0% | |
| TTAACCAACAAGCCCGTGCA+AGG | + | chr1_2:62064537-62064556 | None:intergenic | 50.0% | |
| TAAAGTATGCAGCCTGTGCG+AGG | + | chr1_2:62065175-62065194 | None:intergenic | 50.0% | |
| AGCACTCATGAAAGCTGAGG+AGG | - | chr1_2:62065217-62065236 | Msa0083070:intron | 50.0% | |
| GCAGGAATATGTGGACAGCA+TGG | - | chr1_2:62065271-62065290 | Msa0083070:intron | 50.0% | |
| ! | GAAATCTGAGACGGTGACGA+CGG | - | chr1_2:62065376-62065395 | Msa0083070:intron | 50.0% |
| ! | AAATCTGAGACGGTGACGAC+GGG | - | chr1_2:62065377-62065396 | Msa0083070:intron | 50.0% |
| !! | TCCACCAGCTGGTTTGTCTT+GGG | + | chr1_2:62065408-62065427 | None:intergenic | 50.0% |
| !! | TTCCACCAGCTGGTTTGTCT+TGG | + | chr1_2:62065409-62065428 | None:intergenic | 50.0% |
| CAGCTGGTGGAAGATTGAAG+CGG | - | chr1_2:62065417-62065436 | Msa0083070:intron | 50.0% | |
| AGCTGGTGGAAGATTGAAGC+GGG | - | chr1_2:62065418-62065437 | Msa0083070:intron | 50.0% | |
| GTGTGTCATGTGCCTATCAG+AGG | - | chr1_2:62065448-62065467 | Msa0083070:intron | 50.0% | |
| ! | TTTTCTGCCATGTGCGCATC+AGG | - | chr1_2:62065484-62065503 | Msa0083070:intron | 50.0% |
| CACAAAACCTGATGCGCACA+TGG | + | chr1_2:62065494-62065513 | None:intergenic | 50.0% | |
| CCTTCATCCCTTGCTTCTCA+TGG | + | chr1_2:62065535-62065554 | None:intergenic | 50.0% | |
| CCATGAGAAGCAAGGGATGA+AGG | - | chr1_2:62065532-62065551 | Msa0083070:intron | 50.0% | |
| ! | CGATGGTGGTCCTACATGAA+GGG | + | chr1_2:62065562-62065581 | None:intergenic | 50.0% |
| ! | TCGATGGTGGTCCTACATGA+AGG | + | chr1_2:62065563-62065582 | None:intergenic | 50.0% |
| GTTCAGAGGATTCTCCAAGG+AGG | - | chr1_2:62065666-62065685 | Msa0083070:intron | 50.0% | |
| !!! | TATTTTGGGGTGAAGGGTGG+GGG | + | chr1_2:62065784-62065803 | None:intergenic | 50.0% |
| !!! | CTATTTTGGGGTGAAGGGTG+GGG | + | chr1_2:62065785-62065804 | None:intergenic | 50.0% |
| !!! | CCTATTTTGGGGTGAAGGGT+GGG | + | chr1_2:62065786-62065805 | None:intergenic | 50.0% |
| !!! | TCCTATTTTGGGGTGAAGGG+TGG | + | chr1_2:62065787-62065806 | None:intergenic | 50.0% |
| CAAGCCTGCAGGAACAAAAC+AGG | + | chr1_2:62066061-62066080 | None:intergenic | 50.0% | |
| TTTGTTCCTGCAGGCTTGTC+AGG | - | chr1_2:62066063-62066082 | Msa0083070:five_prime_UTR | 50.0% | |
| TAACAACCTGACAAGCCTGC+AGG | + | chr1_2:62066072-62066091 | None:intergenic | 50.0% | |
| GAGTGAAGGAAGCAACGGCA+CGG | - | chr1_2:62060494-62060513 | Msa0083070:three_prime_UTR | 55.0% | |
| !! | GTGCGGCTGATGGTGGTATT+GGG | + | chr1_2:62060552-62060571 | None:intergenic | 55.0% |
| CTGTGCCAGTGCTACGTAGT+TGG | + | chr1_2:62061017-62061036 | None:intergenic | 55.0% | |
| GTGTCCGACACTGACACATG+TGG | + | chr1_2:62061107-62061126 | None:intergenic | 55.0% | |
| AGGGTCTCCTTCTGCGTACA+AGG | + | chr1_2:62062166-62062185 | None:intergenic | 55.0% | |
| !! | AGAGATGCTCGGTGTACTCC+GGG | - | chr1_2:62062296-62062315 | Msa0083070:intron | 55.0% |
| CCACCACTCAGTTGACCTTC+TGG | + | chr1_2:62062402-62062421 | None:intergenic | 55.0% | |
| CCAGAAGGTCAACTGAGTGG+TGG | - | chr1_2:62062399-62062418 | Msa0083070:intron | 55.0% | |
| CCCGCTTTGCCACAAGCTTT+AGG | + | chr1_2:62062636-62062655 | None:intergenic | 55.0% | |
| TTTGCAGCGCTACCTCCTTC+GGG | + | chr1_2:62062825-62062844 | None:intergenic | 55.0% | |
| GCGGAAGAGGAGAATGGCTT+AGG | + | chr1_2:62062906-62062925 | None:intergenic | 55.0% | |
| GTTCGTCCTTCTCATCCCGT+GGG | + | chr1_2:62062989-62063008 | None:intergenic | 55.0% | |
| TGTTCGTCCTTCTCATCCCG+TGG | + | chr1_2:62062990-62063009 | None:intergenic | 55.0% | |
| TGCAGGATGAGGTGCAAAGC+TGG | - | chr1_2:62063042-62063061 | Msa0083070:intron | 55.0% | |
| ! | CCAACTCCGTTTTCCACGAC+TGG | + | chr1_2:62063397-62063416 | None:intergenic | 55.0% |
| CCAGTCGTGGAAAACGGAGT+TGG | - | chr1_2:62063394-62063413 | Msa0083070:CDS | 55.0% | |
| AGGTGCCTATGCATGTCCAG+GGG | + | chr1_2:62063653-62063672 | None:intergenic | 55.0% | |
| !! | GTGTGGTGCTGGGCCTTTTT+CGG | - | chr1_2:62064287-62064306 | Msa0083070:CDS | 55.0% |
| GGCGCACTAATAAGCTTGGG+TGG | + | chr1_2:62064516-62064535 | None:intergenic | 55.0% | |
| GGAGGATGCCGTCAGAAAGA+AGG | - | chr1_2:62065235-62065254 | Msa0083070:intron | 55.0% | |
| GAAGGCAGCTAGTCAACTGC+AGG | - | chr1_2:62065253-62065272 | Msa0083070:intron | 55.0% | |
| ! | AATCTGAGACGGTGACGACG+GGG | - | chr1_2:62065378-62065397 | Msa0083070:intron | 55.0% |
| TCCCAAGACAAACCAGCTGG+TGG | - | chr1_2:62065404-62065423 | Msa0083070:intron | 55.0% | |
| CGCTTCAATCTTCCACCAGC+TGG | + | chr1_2:62065419-62065438 | None:intergenic | 55.0% | |
| AGGGTGGGGGAATATGGACT+AGG | + | chr1_2:62065771-62065790 | None:intergenic | 55.0% | |
| CCCACCCTTCACCCCAAAAT+AGG | - | chr1_2:62065783-62065802 | Msa0083070:intron | 55.0% | |
| !! | GGTGCGGCTGATGGTGGTAT+TGG | + | chr1_2:62060553-62060572 | None:intergenic | 60.0% |
| TCGTGCCCCTGGACATGCAT+AGG | - | chr1_2:62063645-62063664 | Msa0083070:CDS | 60.0% | |
| ! | TGTTCGAGCCGGCGCTTTTG+CGG | - | chr1_2:62064460-62064479 | Msa0083070:CDS | 60.0% |
| ! | ATCGGTTGCCGCAAAAGCGC+CGG | + | chr1_2:62064471-62064490 | None:intergenic | 60.0% |
| ! | ATCTGAGACGGTGACGACGG+GGG | - | chr1_2:62065379-62065398 | Msa0083070:intron | 60.0% |
| GGCTCCCAAGACAAACCAGC+TGG | - | chr1_2:62065401-62065420 | Msa0083070:intron | 60.0% | |
| GGGTGAAGGGTGGGGGAATA+TGG | + | chr1_2:62065777-62065796 | None:intergenic | 60.0% | |
| ! | GTTAGGGGTGCGGCTGATGG+TGG | + | chr1_2:62060559-62060578 | None:intergenic | 65.0% |
| ! | AGGGTTAGGGGTGCGGCTGA+TGG | + | chr1_2:62060562-62060581 | None:intergenic | 65.0% |
| TGCGCCTTGCACGGGCTTGT+TGG | - | chr1_2:62064530-62064549 | Msa0083070:CDS | 65.0% | |
| ! | TCTGAGACGGTGACGACGGG+GGG | - | chr1_2:62065380-62065399 | Msa0083070:intron | 65.0% |
| ! | GACGGTCTGACTCGTGCCCC+TGG | - | chr1_2:62063634-62063653 | Msa0083070:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 62060476 | 62066148 | 62060476 | ID=Msa0083070;Name=Msa0083070 |
| chr1_2 | mRNA | 62060476 | 62066148 | 62060476 | ID=Msa0083070-mRNA-1;Parent=Msa0083070;Name=Msa0083070-mRNA-1;_AED=0.01;_eAED=0.01;_QI=261|1|1|1|0.33|0.5|4|529|741 |
| chr1_2 | exon | 62060476 | 62061490 | 62060476 | ID=Msa0083070-mRNA-1:exon:20580;Parent=Msa0083070-mRNA-1 |
| chr1_2 | exon | 62063113 | 62064852 | 62063113 | ID=Msa0083070-mRNA-1:exon:20579;Parent=Msa0083070-mRNA-1 |
| chr1_2 | exon | 62065717 | 62065762 | 62065717 | ID=Msa0083070-mRNA-1:exon:20578;Parent=Msa0083070-mRNA-1 |
| chr1_2 | exon | 62065934 | 62066148 | 62065934 | ID=Msa0083070-mRNA-1:exon:20577;Parent=Msa0083070-mRNA-1 |
| chr1_2 | five_prime_UTR | 62065934 | 62066148 | 62065934 | ID=Msa0083070-mRNA-1:five_prime_utr;Parent=Msa0083070-mRNA-1 |
| chr1_2 | five_prime_UTR | 62065717 | 62065762 | 62065717 | ID=Msa0083070-mRNA-1:five_prime_utr;Parent=Msa0083070-mRNA-1 |
| chr1_2 | CDS | 62063113 | 62064852 | 62063113 | ID=Msa0083070-mRNA-1:cds;Parent=Msa0083070-mRNA-1 |
| chr1_2 | CDS | 62061005 | 62061490 | 62061005 | ID=Msa0083070-mRNA-1:cds;Parent=Msa0083070-mRNA-1 |
| chr1_2 | three_prime_UTR | 62060476 | 62061004 | 62060476 | ID=Msa0083070-mRNA-1:three_prime_utr;Parent=Msa0083070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
