Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746420 | XP_013469244.1 | 97.166 | 741 | 21 | 0 | 1 | 741 | 1 | 741 | 0.0 | 1479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746420 | sp|Q9ZVT8|RF4_ARATH | 36.296 | 810 | 404 | 21 | 21 | 737 | 29 | 819 | 5.31e-127 | 400 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746420 | A0A072VN69 | 97.166 | 741 | 21 | 0 | 1 | 741 | 1 | 741 | 0.0 | 1479 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0009430 | Msa0746420 | 0.800202 | 1.609570e-48 | -8.615850e-47 |
| Msa0034420 | Msa0746420 | 0.923093 | 4.177685e-89 | -8.615850e-47 |
| Msa0037250 | Msa0746420 | 0.802102 | 6.580073e-49 | -8.615850e-47 |
| Msa0046740 | Msa0746420 | 0.806755 | 7.050407e-50 | -8.615850e-47 |
| Msa0056470 | Msa0746420 | 0.819310 | 1.242346e-52 | -8.615850e-47 |
| Msa0064350 | Msa0746420 | 0.819646 | 1.041237e-52 | -8.615850e-47 |
| Msa0073480 | Msa0746420 | 0.801436 | 9.011192e-49 | -8.615850e-47 |
| Msa0078650 | Msa0746420 | 0.817817 | 2.708363e-52 | -8.615850e-47 |
| Msa0082280 | Msa0746420 | 0.811602 | 6.450400e-51 | -8.615850e-47 |
| Msa0083070 | Msa0746420 | 0.998422 | 1.311694e-264 | -8.615850e-47 |
| Msa0094470 | Msa0746420 | 0.812280 | 4.589077e-51 | -8.615850e-47 |
| Msa0610530 | Msa0746420 | 0.822196 | 2.695476e-53 | -8.615850e-47 |
| Msa0610560 | Msa0746420 | 0.830349 | 3.087900e-55 | -8.615850e-47 |
| Msa0615990 | Msa0746420 | 0.808782 | 2.615309e-50 | -8.615850e-47 |
| Msa0661300 | Msa0746420 | 0.815513 | 8.895053e-52 | -8.615850e-47 |
| Msa0687630 | Msa0746420 | 0.812817 | 3.502660e-51 | -8.615850e-47 |
| Msa0703230 | Msa0746420 | 0.803695 | 3.082732e-49 | -8.615850e-47 |
| Msa0746420 | Msa0750880 | 0.802394 | 5.729131e-49 | -8.615850e-47 |
| Msa0746420 | Msa0818310 | 0.814546 | 1.457923e-51 | -8.615850e-47 |
| Msa0746420 | Msa0858770 | 0.810151 | 1.329399e-50 | -8.615850e-47 |
| Msa0746420 | Msa0968590 | 0.837131 | 6.228562e-57 | -8.615850e-47 |
| Msa0746420 | Msa1013400 | 0.805237 | 1.470815e-49 | -8.615850e-47 |
| Msa0746420 | Msa1019260 | 0.802374 | 5.784153e-49 | -8.615850e-47 |
| Msa0746420 | Msa1081150 | 0.818746 | 1.668532e-52 | -8.615850e-47 |
| Msa0746420 | Msa1101600 | 0.823203 | 1.572056e-53 | -8.615850e-47 |
| Msa0746420 | Msa1104140 | 0.804468 | 2.129200e-49 | -8.615850e-47 |
| Msa0746420 | Msa1119200 | 0.805524 | 1.280886e-49 | -8.615850e-47 |
| Msa0746420 | Msa1126510 | 0.848561 | 5.665235e-60 | -8.615850e-47 |
| Msa0746420 | Msa1126770 | 0.821176 | 4.639410e-53 | -8.615850e-47 |
| Msa0746420 | Msa1127890 | 0.838016 | 3.694426e-57 | -8.615850e-47 |
| Msa0746420 | Msa1130980 | 0.823723 | 1.187910e-53 | -8.615850e-47 |
| Msa0746420 | Msa1165870 | 0.822526 | 2.259331e-53 | -8.615850e-47 |
| Msa0746420 | Msa1165940 | 0.833359 | 5.580636e-56 | -8.615850e-47 |
| Msa0746420 | Msa1166330 | 0.812006 | 5.267295e-51 | -8.615850e-47 |
| Msa0746420 | Msa1166340 | 0.806393 | 8.409398e-50 | -8.615850e-47 |
| Msa0746420 | Msa1166860 | 0.846689 | 1.855354e-59 | -8.615850e-47 |
| Msa0746420 | Msa1184370 | 0.816588 | 5.117942e-52 | -8.615850e-47 |
| Msa0746420 | Msa1218600 | 0.816099 | 6.583785e-52 | -8.615850e-47 |
| Msa0746420 | Msa1257510 | 0.824871 | 6.381179e-54 | -8.615850e-47 |
| Msa0746420 | Msa1292830 | 0.832941 | 7.091300e-56 | -8.615850e-47 |
| Msa0746420 | Msa1304820 | 0.807108 | 5.937918e-50 | -8.615850e-47 |
| Msa0746420 | Msa1307950 | 0.824745 | 6.832031e-54 | -8.615850e-47 |
| Msa0746420 | Msa1321630 | 0.801987 | 6.948177e-49 | -8.615850e-47 |
| Msa0746420 | Msa1367590 | 0.800243 | 1.579483e-48 | -8.615850e-47 |
| Msa0746420 | Msa1370860 | 0.813187 | 2.905494e-51 | -8.615850e-47 |
| Msa0746420 | Msa1374120 | 0.800688 | 1.281373e-48 | -8.615850e-47 |
| Msa0746420 | Msa1394290 | 0.805165 | 1.523016e-49 | -8.615850e-47 |
| Msa0746420 | Msa1404190 | 0.819034 | 1.435586e-52 | -8.615850e-47 |
| Msa0746420 | Msa1418340 | 0.826743 | 2.294410e-54 | -8.615850e-47 |
| Msa0746420 | Msa1422580 | 0.804021 | 2.638200e-49 | -8.615850e-47 |
| Msa0746420 | Msa1442850 | 0.806787 | 6.942371e-50 | -8.615850e-47 |
| Msa0746420 | Msa1443780 | 0.824492 | 7.837486e-54 | -8.615850e-47 |
| Msa0746420 | Msa1465080 | 0.817364 | 3.427024e-52 | -8.615850e-47 |
| Msa0125540 | Msa0746420 | 0.809360 | 1.966666e-50 | -8.615850e-47 |
| Msa0126370 | Msa0746420 | 0.807850 | 4.132817e-50 | -8.615850e-47 |
| Msa0127310 | Msa0746420 | 0.802529 | 5.374168e-49 | -8.615850e-47 |
| Msa0129060 | Msa0746420 | 0.818379 | 2.021547e-52 | -8.615850e-47 |
| Msa0151370 | Msa0746420 | 0.801292 | 9.645916e-49 | -8.615850e-47 |
| Msa0191050 | Msa0746420 | 0.804651 | 1.950401e-49 | -8.615850e-47 |
| Msa0195630 | Msa0746420 | 0.802584 | 5.235622e-49 | -8.615850e-47 |
| Msa0199880 | Msa0746420 | 0.825112 | 5.596881e-54 | -8.615850e-47 |
| Msa0229760 | Msa0746420 | 0.813491 | 2.491960e-51 | -8.615850e-47 |
| Msa0366890 | Msa0746420 | 0.810566 | 1.081346e-50 | -8.615850e-47 |
| Msa0369450 | Msa0746420 | 0.807998 | 3.842619e-50 | -8.615850e-47 |
| Msa0372670 | Msa0746420 | 0.800507 | 1.395247e-48 | -8.615850e-47 |
| Msa0376300 | Msa0746420 | 0.814549 | 1.456053e-51 | -8.615850e-47 |
| Msa0387730 | Msa0746420 | 0.839301 | 1.719661e-57 | -8.615850e-47 |
| Msa0414800 | Msa0746420 | 0.813195 | 2.894419e-51 | -8.615850e-47 |
| Msa0474950 | Msa0746420 | 0.835820 | 1.343148e-56 | -8.615850e-47 |
| Msa0481480 | Msa0746420 | 0.803748 | 3.006720e-49 | -8.615850e-47 |
| Msa0267970 | Msa0746420 | 0.834831 | 2.386974e-56 | -8.615850e-47 |
| Msa0280610 | Msa0746420 | 0.801396 | 9.183015e-49 | -8.615850e-47 |
| Msa0314720 | Msa0746420 | 0.824946 | 6.127936e-54 | -8.615850e-47 |
| Msa0319850 | Msa0746420 | 0.806456 | 8.155971e-50 | -8.615850e-47 |
| Msa0497490 | Msa0746420 | 0.814161 | 1.774062e-51 | -8.615850e-47 |
| Msa0518390 | Msa0746420 | 0.810917 | 9.083117e-51 | -8.615850e-47 |
| Msa0518450 | Msa0746420 | 0.802739 | 4.863279e-49 | -8.615850e-47 |
| Msa0524500 | Msa0746420 | 0.813519 | 2.457243e-51 | -8.615850e-47 |
| Msa0552810 | Msa0746420 | 0.841534 | 4.483598e-58 | -8.615850e-47 |
| Msa0581070 | Msa0746420 | 0.809985 | 1.443494e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746420 | MtrunA17_Chr1g0196471 | 97.131 | 732 | 21 | 0 | 10 | 741 | 1 | 732 | 0.0 | 1458 |
| Msa0746420 | MtrunA17_Chr2g0286891 | 33.844 | 783 | 395 | 20 | 71 | 737 | 102 | 877 | 1.70e-112 | 361 |
| Msa0746420 | MtrunA17_Chr1g0149201 | 85.526 | 76 | 11 | 0 | 125 | 200 | 1 | 76 | 1.20e-36 | 132 |
| Msa0746420 | MtrunA17_Chr4g0054731 | 27.136 | 398 | 268 | 6 | 357 | 733 | 334 | 730 | 5.18e-31 | 130 |
| Msa0746420 | MtrunA17_Chr4g0054731 | 32.418 | 182 | 80 | 6 | 52 | 211 | 64 | 224 | 7.98e-15 | 78.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0746420 | AT1G03365.1 | 36.296 | 810 | 404 | 21 | 21 | 737 | 29 | 819 | 5.40e-128 | 400 |
| Msa0746420 | AT1G03365.2 | 36.296 | 810 | 404 | 21 | 21 | 737 | 29 | 819 | 5.40e-128 | 400 |
| Msa0746420 | AT4G03000.1 | 35.075 | 804 | 413 | 22 | 21 | 737 | 30 | 811 | 1.49e-120 | 381 |
| Msa0746420 | AT4G03000.2 | 35.075 | 804 | 413 | 22 | 21 | 737 | 30 | 811 | 1.49e-120 | 381 |
| Msa0746420 | AT4G03000.4 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 1.60e-72 | 249 |
| Msa0746420 | AT4G03000.6 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 1.60e-72 | 249 |
| Msa0746420 | AT4G03000.5 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 2.51e-72 | 250 |
| Msa0746420 | AT4G03000.3 | 32.905 | 623 | 326 | 19 | 21 | 573 | 30 | 630 | 5.06e-72 | 248 |
| Msa0746420 | AT2G35330.1 | 29.480 | 346 | 222 | 4 | 406 | 733 | 390 | 731 | 2.11e-34 | 140 |
| Msa0746420 | AT2G35330.1 | 35.632 | 174 | 85 | 6 | 56 | 220 | 86 | 241 | 2.04e-17 | 87.4 |
| Msa0746420 | AT2G35330.2 | 29.480 | 346 | 222 | 4 | 406 | 733 | 363 | 704 | 2.85e-34 | 140 |
| Msa0746420 | AT2G35330.2 | 35.632 | 174 | 85 | 6 | 56 | 220 | 59 | 214 | 1.56e-17 | 87.8 |
| Msa0746420 | AT1G32530.1 | 27.326 | 344 | 228 | 6 | 408 | 733 | 365 | 704 | 1.00e-24 | 110 |
| Msa0746420 | AT1G32530.1 | 32.075 | 159 | 93 | 4 | 57 | 206 | 46 | 198 | 1.42e-12 | 71.6 |
Find 222 sgRNAs with CRISPR-Local
Find 429 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTGATGTAAACTCTTTA+TGG | 0.161953 | 5_1:+68589804 | None:intergenic |
| CACAGATGGAGTACTTATTT+TGG | 0.170025 | 5_1:+68587047 | None:intergenic |
| TAGATATAGACTTTCCTTAA+TGG | 0.209132 | 5_1:-68586769 | Msa0746420:three_prime_UTR |
| TCGTCTTTCGCTGTGGGTTT+TGG | 0.209418 | 5_1:+68591795 | None:intergenic |
| ATCAAGAAGGTTGTTGATTT+AGG | 0.243477 | 5_1:-68590289 | Msa0746420:CDS |
| GAAGGTCATTTACACCATTA+TGG | 0.248027 | 5_1:-68586689 | Msa0746420:three_prime_UTR |
| AGCTTCGATTCAGCGGAATT+AGG | 0.251314 | 5_1:-68590436 | Msa0746420:CDS |
| CTACTGCTGCCCAAGAAATT+TGG | 0.257158 | 5_1:+68586789 | None:intergenic |
| GGACTTACTGATGAGTAATT+TGG | 0.257637 | 5_1:-68590332 | Msa0746420:CDS |
| GTAGGACCACCATCGAATTT+AGG | 0.260424 | 5_1:-68586819 | Msa0746420:CDS |
| CACTTCTTCCATACTCATTC+TGG | 0.283048 | 5_1:-68589129 | Msa0746420:CDS |
| TTCACGATTCCTATCCATTA+AGG | 0.283232 | 5_1:+68586755 | None:intergenic |
| CACTTCAAGGTGAAGTAATA+TGG | 0.284165 | 5_1:+68586269 | None:intergenic |
| AGGATTCATGCCAAATTTCT+TGG | 0.286335 | 5_1:-68586799 | Msa0746420:CDS |
| TACCTGCATAACCTTCTTAT+TGG | 0.286548 | 5_1:+68589310 | None:intergenic |
| CTTGCCCAAAGCCTCATTAA+AGG | 0.287064 | 5_1:+68589427 | None:intergenic |
| TATTCCCTTTAATGAGGCTT+TGG | 0.297007 | 5_1:-68589432 | Msa0746420:CDS |
| GACTGAACATTTAACTTTGA+TGG | 0.306629 | 5_1:+68589923 | None:intergenic |
| GGTGCGGCTGATGGTGGTAT+TGG | 0.311045 | 5_1:+68591835 | None:intergenic |
| CCTTCATCCCTTGCTTCTCA+TGG | 0.314057 | 5_1:+68586854 | None:intergenic |
| ATTACAGGGTAGAGTGAAAA+AGG | 0.314098 | 5_1:-68587259 | Msa0746420:intron |
| GGCAAAGCGGGTGTTAAATT+AGG | 0.314606 | 5_1:-68589740 | Msa0746420:CDS |
| CTTTGCCTCCAGAATGAGTA+TGG | 0.314804 | 5_1:+68589121 | None:intergenic |
| TTGCGGATTTGTAAATTCAT+AGG | 0.322883 | 5_1:+68590459 | None:intergenic |
| GCTTCGATTCAGCGGAATTA+GGG | 0.329207 | 5_1:-68590435 | Msa0746420:CDS |
| CCCACCCTTCACCCCAAAAT+AGG | 0.330255 | 5_1:-68586603 | Msa0746420:three_prime_UTR |
| CCCGCTTTGCCACAAGCTTT+AGG | 0.332600 | 5_1:+68589752 | None:intergenic |
| CCACCACTCAGTTGACCTTC+TGG | 0.338744 | 5_1:+68589986 | None:intergenic |
| TTCCACCAGCTGGTTTGTCT+TGG | 0.343705 | 5_1:+68586980 | None:intergenic |
| TTTGTTCCTGCAGGCTTGTC+AGG | 0.343757 | 5_1:-68586323 | Msa0746420:three_prime_UTR |
| GTGCGGCTGATGGTGGTATT+GGG | 0.343901 | 5_1:+68591836 | None:intergenic |
| TAGATTCTGATTTACTTTCC+TGG | 0.344878 | 5_1:+68589855 | None:intergenic |
| TCCACCAGCTGGTTTGTCTT+GGG | 0.350976 | 5_1:+68586981 | None:intergenic |
| GCAGTTACTGCATTATAGTT+TGG | 0.354061 | 5_1:-68590113 | Msa0746420:CDS |
| CGCTTCAATCTTCCACCAGC+TGG | 0.354227 | 5_1:+68586970 | None:intergenic |
| ATCTCGAGCACAAGAATTGC+AGG | 0.366277 | 5_1:-68589360 | Msa0746420:CDS |
| TTTGGGTATTACAAGGGTTA+GGG | 0.369047 | 5_1:+68591813 | None:intergenic |
| TCCGCTGAATCGAAGCTTTG+CGG | 0.370291 | 5_1:+68590442 | None:intergenic |
| AATAGCACAGAGAAACTTGA+TGG | 0.375550 | 5_1:-68586494 | Msa0746420:three_prime_UTR |
| TTTACACATAACTGTCTCTA+AGG | 0.376038 | 5_1:+68586536 | None:intergenic |
| TATTATAATGGCTGAAGAAA+TGG | 0.381498 | 5_1:-68590593 | Msa0746420:CDS |
| CAAGCCTGCAGGAACAAAAC+AGG | 0.383571 | 5_1:+68586328 | None:intergenic |
| ATTCCCTTTAATGAGGCTTT+GGG | 0.387334 | 5_1:-68589431 | Msa0746420:CDS |
| AAGAGTTTACATCAGTGCTT+AGG | 0.388024 | 5_1:-68589799 | Msa0746420:CDS |
| TCTTCAATGGTTACCGAAGA+TGG | 0.388812 | 5_1:-68590511 | Msa0746420:CDS |
| TATTATTACTATGCACTTCA+AGG | 0.395160 | 5_1:+68586256 | None:intergenic |
| TTTGCAGCGCTACCTCCTTC+GGG | 0.396787 | 5_1:+68589563 | None:intergenic |
| AATAGCTATTGAAAATTAAG+AGG | 0.403419 | 5_1:+68586355 | None:intergenic |
| TGAAGCAATGTGGGAGTTGC+TGG | 0.403989 | 5_1:-68590041 | Msa0746420:CDS |
| CAGTCAAGAAATGGCTGAAA+TGG | 0.412394 | 5_1:-68590260 | Msa0746420:CDS |
| AATGTTCAGTCTGATATGAT+TGG | 0.413548 | 5_1:-68589911 | Msa0746420:CDS |
| CATTGCTTCAGTTACTGTTA+AGG | 0.415267 | 5_1:+68590054 | None:intergenic |
| GATAGACAAGGGTATTATAA+TGG | 0.415815 | 5_1:-68590605 | Msa0746420:CDS |
| ACTGAACATTTAACTTTGAT+GGG | 0.418576 | 5_1:+68589924 | None:intergenic |
| TTGCATCAGGAGATAGAAAA+GGG | 0.421960 | 5_1:-68588921 | Msa0746420:CDS |
| ATAAAATGTAGCAGCCATAA+TGG | 0.423399 | 5_1:+68586675 | None:intergenic |
| TTGTACAGAAGAACAACATT+TGG | 0.424492 | 5_1:-68590404 | Msa0746420:CDS |
| CACACTTAAGGAACCATCTT+CGG | 0.424685 | 5_1:+68590498 | None:intergenic |
| CAACACACTGAATACTTTGA+AGG | 0.424983 | 5_1:-68590182 | Msa0746420:CDS |
| AGGTGCAAAGCTGGAATGAC+TGG | 0.426147 | 5_1:-68589334 | Msa0746420:CDS |
| GATTCAGCGGAATTAGGGTT+AGG | 0.429023 | 5_1:-68590430 | Msa0746420:CDS |
| TCATGGAGCTCATTGCAATT+CGG | 0.431116 | 5_1:+68586871 | None:intergenic |
| CAACCGACCTCTCCTCTGAT+AGG | 0.432294 | 5_1:+68586926 | None:intergenic |
| TGCAGGATGAGGTGCAAAGC+TGG | 0.432702 | 5_1:-68589343 | Msa0746420:CDS |
| CCCAAATAGTAGAGTAGAAA+CGG | 0.434007 | 5_1:-68591921 | None:intergenic |
| AGATTCTGATTTACTTTCCT+GGG | 0.435378 | 5_1:+68589856 | None:intergenic |
| GAAATCATCCTCCACACTTA+AGG | 0.438705 | 5_1:+68590486 | None:intergenic |
| AGATAAGCTTCGCAAGCTTC+AGG | 0.443538 | 5_1:-68589285 | Msa0746420:CDS |
| ATTCTCCTCTTCCGCTCAAA+AGG | 0.445328 | 5_1:-68589474 | Msa0746420:CDS |
| TTGCCCAAAGCCTCATTAAA+GGG | 0.446677 | 5_1:+68589428 | None:intergenic |
| TGTACAGAAGAACAACATTT+GGG | 0.449983 | 5_1:-68590403 | Msa0746420:CDS |
| CTTGCATCAGGAGATAGAAA+AGG | 0.452299 | 5_1:-68588922 | Msa0746420:CDS |
| AGATGATGAGTCTTCTTCAA+TGG | 0.452751 | 5_1:-68590524 | Msa0746420:CDS |
| ACAAAAGGAGTTAGTATAGC+AGG | 0.455522 | 5_1:-68589623 | Msa0746420:CDS |
| TGGCTGAAATGGCCGTTTCA+AGG | 0.456420 | 5_1:-68590249 | Msa0746420:CDS |
| GGATTCATGCCAAATTTCTT+GGG | 0.458310 | 5_1:-68586798 | Msa0746420:CDS |
| CCAAATAGTAGAGTAGAAAC+GGG | 0.459460 | 5_1:-68591920 | None:intergenic |
| CCTAAAGCTTGTGGCAAAGC+GGG | 0.460953 | 5_1:-68589752 | Msa0746420:CDS |
| GCGGAAGAGGAGAATGGCTT+AGG | 0.464954 | 5_1:+68589482 | None:intergenic |
| ACCTTCAAAATGAACCTCCT+TGG | 0.467142 | 5_1:+68586706 | None:intergenic |
| TGCTGGTATTCCCTTTAATG+AGG | 0.474949 | 5_1:-68589438 | Msa0746420:CDS |
| AGGGTTAGGGGTGCGGCTGA+TGG | 0.477914 | 5_1:+68591826 | None:intergenic |
| TATTACAAGGGTTAGGGGTG+CGG | 0.478734 | 5_1:+68591819 | None:intergenic |
| GTAGATGTTGCATCCTTTGT+GGG | 0.480943 | 5_1:+68589536 | None:intergenic |
| TTCTGATTTGGAACTTCAGA+TGG | 0.484458 | 5_1:+68589668 | None:intergenic |
| AAGGTTCAAAATTACTGTGC+TGG | 0.484913 | 5_1:-68589455 | Msa0746420:CDS |
| AATCATCATTGGTTGAAATA+CGG | 0.485214 | 5_1:+68589594 | None:intergenic |
| AATTCCACATACCTCAGTAT+TGG | 0.485452 | 5_1:+68588884 | None:intergenic |
| AGAGATGCTCGGTGTACTCC+GGG | 0.487036 | 5_1:-68590089 | Msa0746420:CDS |
| AGGGTCTCCTTCTGCGTACA+AGG | 0.490354 | 5_1:+68590222 | None:intergenic |
| AAAGTTAGCTAACTTGCATC+AGG | 0.490897 | 5_1:-68588934 | Msa0746420:CDS |
| ATAGACTTTCCTTAATGGAT+AGG | 0.492112 | 5_1:-68586764 | Msa0746420:three_prime_UTR |
| TGCGGATTTGTAAATTCATA+GGG | 0.493953 | 5_1:+68590460 | None:intergenic |
| GGAAAGCTTACAAGCGTAAG+TGG | 0.494729 | 5_1:-68589719 | Msa0746420:CDS |
| AGAGTTTACATCAGTGCTTA+GGG | 0.496266 | 5_1:-68589798 | Msa0746420:CDS |
| TGTTCGTCCTTCTCATCCCG+TGG | 0.502489 | 5_1:+68589398 | None:intergenic |
| ACAAGCCCAGTCGTGGAAAA+CGG | 0.503942 | 5_1:-68588997 | Msa0746420:CDS |
| AGGAGGCTACAGTCAAGAAA+TGG | 0.504693 | 5_1:-68590269 | Msa0746420:CDS |
| AAATCTGAGACGGTGACGAC+GGG | 0.504966 | 5_1:-68587009 | Msa0746420:CDS |
| GGGTAAAGCTGAATCATCAT+TGG | 0.505790 | 5_1:+68589583 | None:intergenic |
| CCATGAGAAGCAAGGGATGA+AGG | 0.505923 | 5_1:-68586854 | Msa0746420:CDS |
| AAAACTGTTGGTTCTGAACA+AGG | 0.506590 | 5_1:-68590568 | Msa0746420:CDS |
| AGTAGATGTTGCATCCTTTG+TGG | 0.507886 | 5_1:+68589535 | None:intergenic |
| AACACACTGAATACTTTGAA+GGG | 0.509898 | 5_1:-68590181 | Msa0746420:CDS |
| CGTGGCTCCTCAAATACAAA+AGG | 0.515636 | 5_1:-68589638 | Msa0746420:CDS |
| TGATTTGGAACTTCAGATGG+TGG | 0.515862 | 5_1:+68589671 | None:intergenic |
| GCTGTGCTAAGACTAAAATC+TGG | 0.520602 | 5_1:-68587072 | Msa0746420:CDS |
| AAGAAGGTTGTTGATTTAGG+AGG | 0.522918 | 5_1:-68590286 | Msa0746420:CDS |
| TCCGCAAAGCTTCGATTCAG+CGG | 0.523570 | 5_1:-68590443 | Msa0746420:CDS |
| CACAAAACCTGATGCGCACA+TGG | 0.524231 | 5_1:+68586895 | None:intergenic |
| GGCAAGTTATCAACAAGCAC+TGG | 0.524731 | 5_1:-68589042 | Msa0746420:CDS |
| AAGGTACCTGGTTGTGATGA+TGG | 0.526218 | 5_1:+68591710 | None:intergenic |
| GTTAGGGGTGCGGCTGATGG+TGG | 0.527350 | 5_1:+68591829 | None:intergenic |
| GGCCAATAAGAAGGTTATGC+AGG | 0.527394 | 5_1:-68589312 | Msa0746420:CDS |
| TGCTTCAGTTACTGTTAAGG+AGG | 0.527494 | 5_1:+68590057 | None:intergenic |
| TAGAGATGCTCGGTGTACTC+CGG | 0.530161 | 5_1:-68590090 | Msa0746420:CDS |
| GAAGAAATGGATAAAACTGT+TGG | 0.535165 | 5_1:-68590580 | Msa0746420:CDS |
| AGGTGAAGTAATATGGATTG+TGG | 0.535399 | 5_1:+68586276 | None:intergenic |
| TTGGGTATTACAAGGGTTAG+GGG | 0.536017 | 5_1:+68591814 | None:intergenic |
| TTCACTTTGATCTTTGCTCA+AGG | 0.538653 | 5_1:-68591499 | Msa0746420:intron |
| ACTAGCTGCCTTCTTTCTGA+CGG | 0.543071 | 5_1:+68587143 | None:intergenic |
| TGAAGATTGGAAGGATCCTA+TGG | 0.544100 | 5_1:-68590368 | Msa0746420:CDS |
| TCGATGGTGGTCCTACATGA+AGG | 0.545025 | 5_1:+68586826 | None:intergenic |
| GGAGGATGCCGTCAGAAAGA+AGG | 0.545930 | 5_1:-68587151 | Msa0746420:CDS |
| GTCGTTGGCTGAAAAGTCAA+TGG | 0.547386 | 5_1:-68589063 | Msa0746420:CDS |
| GAATGACTGGGCCAATAAGA+AGG | 0.549315 | 5_1:-68589321 | Msa0746420:CDS |
| AGCTGGTGGAAGATTGAAGC+GGG | 0.553151 | 5_1:-68586968 | Msa0746420:CDS |
| GAAGGCAGCTAGTCAACTGC+AGG | 0.553567 | 5_1:-68587133 | Msa0746420:CDS |
| GGCTCCCAAGACAAACCAGC+TGG | 0.554984 | 5_1:-68586985 | Msa0746420:CDS |
| CGAAGATGGTTCCTTAAGTG+TGG | 0.556725 | 5_1:-68590497 | Msa0746420:CDS |
| GTACAAGGACTTCCTTGAAA+CGG | 0.566329 | 5_1:+68590237 | None:intergenic |
| GCTTCAGTTACTGTTAAGGA+GGG | 0.567510 | 5_1:+68590058 | None:intergenic |
| GTTTATCCCACGGGATGAGA+AGG | 0.567819 | 5_1:-68589405 | Msa0746420:CDS |
| AGGAAGTCCTTGTACGCAGA+AGG | 0.568133 | 5_1:-68590229 | Msa0746420:CDS |
| GGCATGAATCCTAAATTCGA+TGG | 0.569361 | 5_1:+68586810 | None:intergenic |
| GTGTGCTCGAGGTTGAAGAT+TGG | 0.571035 | 5_1:-68590381 | Msa0746420:CDS |
| AGCACAAGAATTGCAGGATG+AGG | 0.572239 | 5_1:-68589354 | Msa0746420:CDS |
| CAGAATGAGTATGGAAGAAG+TGG | 0.572958 | 5_1:+68589130 | None:intergenic |
| GCTTGTCAGGTTGTTATGTG+AGG | 0.573085 | 5_1:-68586310 | Msa0746420:three_prime_UTR |
| TAGTCAACTGCAGGAATATG+TGG | 0.573830 | 5_1:-68587124 | Msa0746420:CDS |
| TAGAAGAGAATGCTGAGAAG+AGG | 0.574213 | 5_1:-68589205 | Msa0746420:CDS |
| TTTGGGCAAGTTTATCCCAC+GGG | 0.575708 | 5_1:-68589414 | Msa0746420:CDS |
| AACAGTAACTGAAGCAATGT+GGG | 0.577399 | 5_1:-68590050 | Msa0746420:CDS |
| ATAGCTATTGAAAATTAAGA+GGG | 0.578070 | 5_1:+68586356 | None:intergenic |
| CTGAATACTTTGAAGGGGAA+AGG | 0.578346 | 5_1:-68590175 | Msa0746420:CDS |
| CTTTGGGCAAGTTTATCCCA+CGG | 0.580478 | 5_1:-68589415 | Msa0746420:CDS |
| GTTCGTCCTTCTCATCCCGT+GGG | 0.582182 | 5_1:+68589399 | None:intergenic |
| CACCAACTCTTTCTCTAGCA+AGG | 0.583844 | 5_1:+68589094 | None:intergenic |
| ATGAAAGAACCTAAAGCTTG+TGG | 0.584438 | 5_1:-68589761 | Msa0746420:CDS |
| TATAGTTTGGTAGAGATGCT+CGG | 0.585826 | 5_1:-68590100 | Msa0746420:CDS |
| TCCTATGGCAACTCAGCTTG+AGG | 0.585966 | 5_1:-68590353 | Msa0746420:CDS |
| ACAACATTTGGGTGTGCTCG+AGG | 0.585997 | 5_1:-68590392 | Msa0746420:CDS |
| TGAAGGAATGCCCTTCATGT+AGG | 0.589860 | 5_1:-68586837 | Msa0746420:CDS |
| CTGAACATTTAACTTTGATG+GGG | 0.589971 | 5_1:+68589925 | None:intergenic |
| CAAAATAAGTACTCCATCTG+TGG | 0.591010 | 5_1:-68587046 | Msa0746420:CDS |
| CCAGTCGTGGAAAACGGAGT+TGG | 0.591376 | 5_1:-68588991 | Msa0746420:CDS |
| CAGCATGGTAAAGCTAGAGA+AGG | 0.592676 | 5_1:-68587100 | Msa0746420:CDS |
| GAAATCTGAGACGGTGACGA+CGG | 0.593570 | 5_1:-68587010 | Msa0746420:CDS |
| ATGAGCTCCATGAGAAGCAA+GGG | 0.594437 | 5_1:-68586861 | Msa0746420:CDS |
| CTCACTCACTCAAACACACA+TGG | 0.595985 | 5_1:+68591750 | None:intergenic |
| TAACAACCTGACAAGCCTGC+AGG | 0.597310 | 5_1:+68586317 | None:intergenic |
| TCTGAGACGGTGACGACGGG+GGG | 0.600103 | 5_1:-68587006 | Msa0746420:CDS |
| AACTTTCACAAATATCTCCC+AGG | 0.600719 | 5_1:-68589873 | Msa0746420:CDS |
| ACACGAGTCATTTCACCAGA+AGG | 0.600907 | 5_1:-68590001 | Msa0746420:CDS |
| TAAAGTATGCAGCCTGTGCG+AGG | 0.601463 | 5_1:+68587214 | None:intergenic |
| GTTGGTGTCTGCTAAGTCGT+TGG | 0.602233 | 5_1:-68589078 | Msa0746420:CDS |
| AAGTGGTGCAGTTAGTTCAG+AGG | 0.606670 | 5_1:-68586734 | Msa0746420:three_prime_UTR |
| CTATTCAACAAGCCCAGTCG+TGG | 0.607936 | 5_1:-68589004 | Msa0746420:CDS |
| AAGAAACAAGTGAAATAGAA+CGG | 0.608270 | 5_1:+68586412 | None:intergenic |
| TGTAGACAATATTTGTGAGA+GGG | 0.609208 | 5_1:+68590203 | None:intergenic |
| CGCTGCAAAATTACCCACAA+AGG | 0.609619 | 5_1:-68589549 | Msa0746420:CDS |
| GATTCAGCTTTACCCGAAGG+AGG | 0.610637 | 5_1:-68589575 | Msa0746420:CDS |
| GGATTTGTAAATTCATAGGG+AGG | 0.614022 | 5_1:+68590463 | None:intergenic |
| GTCCTTGCTAGAGAAAGAGT+TGG | 0.614761 | 5_1:-68589096 | Msa0746420:CDS |
| AATGAGCTCCATGAGAAGCA+AGG | 0.618473 | 5_1:-68586862 | Msa0746420:CDS |
| GCTCGAGGTTGAAGATTGGA+AGG | 0.618729 | 5_1:-68590377 | Msa0746420:CDS |
| CTCTGAAGTGGAGAATGCCA+TGG | 0.618759 | 5_1:-68589180 | Msa0746420:CDS |
| GTTAAGAGTGAAGGAAGCAA+CGG | 0.622711 | 5_1:-68591896 | Msa0746420:five_prime_UTR |
| GCAGGAATATGTGGACAGCA+TGG | 0.623496 | 5_1:-68587115 | Msa0746420:CDS |
| TGAGAAGAGGATCTCTGAAG+TGG | 0.625673 | 5_1:-68589192 | Msa0746420:CDS |
| CGATGGTGGTCCTACATGAA+GGG | 0.627258 | 5_1:+68586827 | None:intergenic |
| AGCACTCATGAAAGCTGAGG+AGG | 0.628540 | 5_1:-68587169 | Msa0746420:CDS |
| TCCTCAAGCTGAGTTGCCAT+AGG | 0.629481 | 5_1:+68590352 | None:intergenic |
| TCCCAAGACAAACCAGCTGG+TGG | 0.630501 | 5_1:-68586982 | Msa0746420:CDS |
| GATGATTCAGCTTTACCCGA+AGG | 0.631923 | 5_1:-68589578 | Msa0746420:CDS |
| ATCTGAGACGGTGACGACGG+GGG | 0.633833 | 5_1:-68587007 | Msa0746420:CDS |
| TTCTTCCATACTCATTCTGG+AGG | 0.633921 | 5_1:-68589126 | Msa0746420:CDS |
| ACACACTGAATACTTTGAAG+GGG | 0.634678 | 5_1:-68590180 | Msa0746420:CDS |
| AGAAAACAAGAAATCTGAGA+CGG | 0.635352 | 5_1:-68587019 | Msa0746420:CDS |
| CCTTCACCATCATCACAACC+AGG | 0.635961 | 5_1:-68591716 | Msa0746420:intron |
| ACCTAAAGCTTGTGGCAAAG+CGG | 0.636840 | 5_1:-68589753 | Msa0746420:CDS |
| GTGCCTATCAGAGGAGAGGT+CGG | 0.640007 | 5_1:-68586929 | Msa0746420:CDS |
| TAACAGTAACTGAAGCAATG+TGG | 0.641192 | 5_1:-68590051 | Msa0746420:CDS |
| TGAACATTTAACTTTGATGG+GGG | 0.642090 | 5_1:+68589926 | None:intergenic |
| AGATGGTTCCTTAAGTGTGG+AGG | 0.645854 | 5_1:-68590494 | Msa0746420:CDS |
| TAGATGGAGGTGATAGACAA+GGG | 0.649015 | 5_1:-68590616 | Msa0746420:CDS |
| TTAGTTCAGAGGATTCTCCA+AGG | 0.649177 | 5_1:-68586723 | Msa0746420:three_prime_UTR |
| TGAAGCACTCATGAAAGCTG+AGG | 0.649898 | 5_1:-68587172 | Msa0746420:CDS |
| GATTTGTAAATTCATAGGGA+GGG | 0.650733 | 5_1:+68590464 | None:intergenic |
| AATCTGAGACGGTGACGACG+GGG | 0.653084 | 5_1:-68587008 | Msa0746420:CDS |
| GTAGATGGAGGTGATAGACA+AGG | 0.654637 | 5_1:-68590617 | Msa0746420:intron |
| AATGGATAGGAATCGTGAAG+TGG | 0.657455 | 5_1:-68586751 | Msa0746420:three_prime_UTR |
| GAGTGAAGGAAGCAACGGCA+CGG | 0.658201 | 5_1:-68591891 | Msa0746420:five_prime_UTR |
| ATGAATCCTAAATTCGATGG+TGG | 0.659018 | 5_1:+68586813 | None:intergenic |
| TCATGTGCCTATCAGAGGAG+AGG | 0.661659 | 5_1:-68586933 | Msa0746420:CDS |
| TTGTAGACAATATTTGTGAG+AGG | 0.662345 | 5_1:+68590202 | None:intergenic |
| GGTGCAAAGCTGGAATGACT+GGG | 0.663688 | 5_1:-68589333 | Msa0746420:CDS |
| CAAATAGTAGAGTAGAAACG+GGG | 0.664355 | 5_1:-68591919 | None:intergenic |
| AGGTTGTTATGTGAGGCTCA+AGG | 0.674557 | 5_1:-68586303 | Msa0746420:three_prime_UTR |
| TAAGCTTCGCAAGCTTCAGG+CGG | 0.676302 | 5_1:-68589282 | Msa0746420:CDS |
| AAGCCTGCAGGAACAAAACA+GGG | 0.679743 | 5_1:+68586329 | None:intergenic |
| CCAGAAGGTCAACTGAGTGG+TGG | 0.679750 | 5_1:-68589986 | Msa0746420:CDS |
| TGCATCAGGAGATAGAAAAG+GGG | 0.681951 | 5_1:-68588920 | Msa0746420:CDS |
| ATGTGTAAATTTCATCACAG+CGG | 0.682193 | 5_1:-68586522 | Msa0746420:three_prime_UTR |
| CCTGGTTGTGATGATGGTGA+AGG | 0.689027 | 5_1:+68591716 | None:intergenic |
| TCACCAGAAGGTCAACTGAG+TGG | 0.694120 | 5_1:-68589989 | Msa0746420:CDS |
| GTGTGTCATGTGCCTATCAG+AGG | 0.697894 | 5_1:-68586938 | Msa0746420:CDS |
| CAGCTGGTGGAAGATTGAAG+CGG | 0.698320 | 5_1:-68586969 | Msa0746420:CDS |
| CCAAATCAGAAAATGAAACG+TGG | 0.702226 | 5_1:-68589656 | Msa0746420:CDS |
| GTTCAGAGGATTCTCCAAGG+AGG | 0.719220 | 5_1:-68586720 | Msa0746420:three_prime_UTR |
| AAATCTTCTAGCCAATACTG+AGG | 0.732844 | 5_1:-68588895 | Msa0746420:intron |
| AAATAGTAGAGTAGAAACGG+GGG | 0.747951 | 5_1:-68591918 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAGAAAATAATATAATAAA+TGG | - | chr5_1:68587084-68587103 | Msa0746420:CDS | 10.0% |
| !! | AAATATGAATACAAAAAATT+GGG | + | chr5_1:68587456-68587475 | None:intergenic | 10.0% |
| !! | AAAATATGAATACAAAAAAT+TGG | + | chr5_1:68587457-68587476 | None:intergenic | 10.0% |
| !! | AAAATAAAAATTTGACTATT+CGG | + | chr5_1:68589491-68589510 | None:intergenic | 10.0% |
| !!! | ATAAACTTTTTTTTTTGAAA+CGG | + | chr5_1:68590354-68590373 | None:intergenic | 10.0% |
| !!! | AAATTTTTTGATTAGTTTAT+TGG | - | chr5_1:68590657-68590676 | Msa0746420:intron | 10.0% |
| !! | AACCTTTAACAAAAAAAATT+GGG | + | chr5_1:68586971-68586990 | None:intergenic | 15.0% |
| !!! | TTTTTAGATTTACATATACA+TGG | - | chr5_1:68589507-68589526 | Msa0746420:CDS | 15.0% |
| !!! | TTTATTAGTTTACATATACA+TGG | - | chr5_1:68589762-68589781 | Msa0746420:CDS | 15.0% |
| !! | GTTTCAAAAAAAAAAGTTTA+TGG | - | chr5_1:68590353-68590372 | Msa0746420:CDS | 15.0% |
| !! | AGAAAATGAAAAAGGTAAAA+AGG | + | chr5_1:68586520-68586539 | None:intergenic | 20.0% |
| !! | CAAAAAATGAGAAAAAGTAA+AGG | + | chr5_1:68586727-68586746 | None:intergenic | 20.0% |
| !!! | TTCCCAATTTTTTTTGTTAA+AGG | - | chr5_1:68586966-68586985 | Msa0746420:CDS | 20.0% |
| !! | CAACCTTTAACAAAAAAAAT+TGG | + | chr5_1:68586972-68586991 | None:intergenic | 20.0% |
| !!! | TTATTTTCTCAAATAAGTGT+CGG | + | chr5_1:68587075-68587094 | None:intergenic | 20.0% |
| !! | ACAACCTTTCATAAAAAATT+GGG | + | chr5_1:68587176-68587195 | None:intergenic | 20.0% |
| !! | TACAACCTTTCATAAAAAAT+TGG | + | chr5_1:68587177-68587196 | None:intergenic | 20.0% |
| !! | CAAAAAAAATAACGAACAAA+GGG | + | chr5_1:68587491-68587510 | None:intergenic | 20.0% |
| !! | ACAAAAAAAATAACGAACAA+AGG | + | chr5_1:68587492-68587511 | None:intergenic | 20.0% |
| !!! | ACTTCACAGTTTAATTTTTT+TGG | - | chr5_1:68589743-68589762 | Msa0746420:CDS | 20.0% |
| !!! | CTTCACAGTTTAATTTTTTT+GGG | - | chr5_1:68589744-68589763 | Msa0746420:CDS | 20.0% |
| !!! | TTCACAGTTTAATTTTTTTG+GGG | - | chr5_1:68590000-68590019 | Msa0746420:CDS | 20.0% |
| !! | AAAAAATTACAAGGAGAAAT+CGG | + | chr5_1:68590273-68590292 | None:intergenic | 20.0% |
| !!! | AAAAAGTTTATGGTTTTATG+TGG | - | chr5_1:68590363-68590382 | Msa0746420:CDS | 20.0% |
| !!! | TGATTAGTTTATTGGTTTAT+AGG | - | chr5_1:68590665-68590684 | Msa0746420:intron | 20.0% |
| !!! | TATGATTTCTGTTTTTATGA+TGG | - | chr5_1:68590821-68590840 | Msa0746420:intron | 20.0% |
| !!! | TCTGTTTTATTTCCTATTTT+GGG | + | chr5_1:68591581-68591600 | None:intergenic | 20.0% |
| !!! | TTCTGTTTTATTTCCTATTT+TGG | + | chr5_1:68591582-68591601 | None:intergenic | 20.0% |
| !! | ATAGCTATTGAAAATTAAGA+GGG | + | chr5_1:68591816-68591835 | None:intergenic | 20.0% |
| !! | AATAGCTATTGAAAATTAAG+AGG | + | chr5_1:68591817-68591836 | None:intergenic | 20.0% |
| ! | GAAAAAGGTAAAAAGGAATT+AGG | + | chr5_1:68586513-68586532 | None:intergenic | 25.0% |
| ! | TCTACAAATAAACCACAAAA+GGG | + | chr5_1:68587537-68587556 | None:intergenic | 25.0% |
| ! | ATCTACAAATAAACCACAAA+AGG | + | chr5_1:68587538-68587557 | None:intergenic | 25.0% |
| !! | TTTTGTGGTTTATTTGTAGA+TGG | - | chr5_1:68587537-68587556 | Msa0746420:intron | 25.0% |
| ! | TATTATAATGGCTGAAGAAA+TGG | - | chr5_1:68587576-68587595 | Msa0746420:intron | 25.0% |
| !! | TTTTAGTAATGCTATCAAGA+AGG | - | chr5_1:68587867-68587886 | Msa0746420:intron | 25.0% |
| !! | ACTGAACATTTAACTTTGAT+GGG | + | chr5_1:68588248-68588267 | None:intergenic | 25.0% |
| !! | AATCATCATTGGTTGAAATA+CGG | + | chr5_1:68588578-68588597 | None:intergenic | 25.0% |
| !!! | TTGCTTTTGATTATTTTCCA+TGG | + | chr5_1:68589009-68589028 | None:intergenic | 25.0% |
| ! | TAAAAATTTGACTATTCGGA+AGG | + | chr5_1:68589487-68589506 | None:intergenic | 25.0% |
| !!! | CTGGTTGAATTCATTTTAAT+TGG | + | chr5_1:68589672-68589691 | None:intergenic | 25.0% |
| !!! | CTGGTTGAATTCATTTTAAT+TGG | + | chr5_1:68589672-68589691 | None:intergenic | 25.0% |
| !!! | TTTTCTGTTTCTGTTTTTTG+TGG | - | chr5_1:68590029-68590048 | Msa0746420:CDS | 25.0% |
| ! | ATATATCATCATTTGTCCTA+TGG | + | chr5_1:68590620-68590639 | None:intergenic | 25.0% |
| ! | AGTGTCAATTGTAAACAATT+TGG | + | chr5_1:68590847-68590866 | None:intergenic | 25.0% |
| !! | ATGTTTTCACCATTTAAGTA+AGG | + | chr5_1:68590892-68590911 | None:intergenic | 25.0% |
| ! | TTAAATGGTGAAAACATTAC+AGG | - | chr5_1:68590895-68590914 | Msa0746420:intron | 25.0% |
| ! | TAAATGGTGAAAACATTACA+GGG | - | chr5_1:68590896-68590915 | Msa0746420:intron | 25.0% |
| ! | TAGATATAGACTTTCCTTAA+TGG | - | chr5_1:68591400-68591419 | Msa0746420:intron | 25.0% |
| !!! | CTGTTTTATTTCCTATTTTG+GGG | + | chr5_1:68591580-68591599 | None:intergenic | 25.0% |
| ! | AAGAAACAAGTGAAATAGAA+CGG | + | chr5_1:68591760-68591779 | None:intergenic | 25.0% |
| AAGGAATTAGGAATCGATAA+TGG | + | chr5_1:68586501-68586520 | None:intergenic | 30.0% | |
| GGGTAAAGAGAAAATGAAAA+AGG | + | chr5_1:68586528-68586547 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTTACCCATTTCT+AGG | - | chr5_1:68586534-68586553 | Msa0746420:three_prime_UTR | 30.0% |
| AAGACAAAGAACCTAGAAAT+GGG | + | chr5_1:68586548-68586567 | None:intergenic | 30.0% | |
| AAAGACAAAGAACCTAGAAA+TGG | + | chr5_1:68586549-68586568 | None:intergenic | 30.0% | |
| ! | TTTTCTTTCTCTTTCAACAC+AGG | - | chr5_1:68586624-68586643 | Msa0746420:three_prime_UTR | 30.0% |
| AAAAAGTAAAGGAGCAAGTT+GGG | + | chr5_1:68586716-68586735 | None:intergenic | 30.0% | |
| !! | AGTATTGATGCACAAATCAA+CGG | + | chr5_1:68587007-68587026 | None:intergenic | 30.0% |
| !!! | GGATCCCAATTTTTTATGAA+AGG | - | chr5_1:68587169-68587188 | Msa0746420:CDS | 30.0% |
| ATGAATGAAATCACATGTGT+CGG | - | chr5_1:68587386-68587405 | Msa0746420:intron | 30.0% | |
| !! | GATAGACAAGGGTATTATAA+TGG | - | chr5_1:68587564-68587583 | Msa0746420:intron | 30.0% |
| GAAGAAATGGATAAAACTGT+TGG | - | chr5_1:68587589-68587608 | Msa0746420:intron | 30.0% | |
| GATTTGTAAATTCATAGGGA+GGG | + | chr5_1:68587708-68587727 | None:intergenic | 30.0% | |
| TGCGGATTTGTAAATTCATA+GGG | + | chr5_1:68587712-68587731 | None:intergenic | 30.0% | |
| TTGCGGATTTGTAAATTCAT+AGG | + | chr5_1:68587713-68587732 | None:intergenic | 30.0% | |
| TTGTACAGAAGAACAACATT+TGG | - | chr5_1:68587765-68587784 | Msa0746420:intron | 30.0% | |
| TGTACAGAAGAACAACATTT+GGG | - | chr5_1:68587766-68587785 | Msa0746420:intron | 30.0% | |
| !! | ATCAAGAAGGTTGTTGATTT+AGG | - | chr5_1:68587880-68587899 | Msa0746420:intron | 30.0% |
| TGTAGACAATATTTGTGAGA+GGG | + | chr5_1:68587969-68587988 | None:intergenic | 30.0% | |
| TTGTAGACAATATTTGTGAG+AGG | + | chr5_1:68587970-68587989 | None:intergenic | 30.0% | |
| AACACACTGAATACTTTGAA+GGG | - | chr5_1:68587988-68588007 | Msa0746420:intron | 30.0% | |
| !!! | TTTTGAAATACAAAGTCTGC+AGG | + | chr5_1:68588030-68588049 | None:intergenic | 30.0% |
| ! | TGAACATTTAACTTTGATGG+GGG | + | chr5_1:68588246-68588265 | None:intergenic | 30.0% |
| ! | CTGAACATTTAACTTTGATG+GGG | + | chr5_1:68588247-68588266 | None:intergenic | 30.0% |
| ! | GACTGAACATTTAACTTTGA+TGG | + | chr5_1:68588249-68588268 | None:intergenic | 30.0% |
| AATGTTCAGTCTGATATGAT+TGG | - | chr5_1:68588258-68588277 | Msa0746420:intron | 30.0% | |
| AGATTCTGATTTACTTTCCT+GGG | + | chr5_1:68588316-68588335 | None:intergenic | 30.0% | |
| TAGATTCTGATTTACTTTCC+TGG | + | chr5_1:68588317-68588336 | None:intergenic | 30.0% | |
| ! | ACTAACTCCTTTTGTATTTG+AGG | + | chr5_1:68588541-68588560 | None:intergenic | 30.0% |
| ! | GTAATTTTGAACCTTTTGAG+CGG | + | chr5_1:68588709-68588728 | None:intergenic | 30.0% |
| TACCTACTCTATTATTCTGA+CGG | - | chr5_1:68589400-68589419 | Msa0746420:CDS | 30.0% | |
| !!! | TTTTTTAACAGTGAGACTGA+AGG | + | chr5_1:68589604-68589623 | None:intergenic | 30.0% |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr5_1:68589699-68589718 | Msa0746420:CDS | 30.0% |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr5_1:68589706-68589725 | None:intergenic | 30.0% | |
| ! | ATTTTCCATAGGACAAATGA+TGG | - | chr5_1:68589710-68589729 | Msa0746420:CDS | 30.0% |
| ATATACCATCATTTGTCCTA+TGG | + | chr5_1:68589718-68589737 | None:intergenic | 30.0% | |
| !!! | TTTTTTAACAGTGAGACTGA+AGG | + | chr5_1:68589604-68589623 | None:intergenic | 30.0% |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr5_1:68589699-68589718 | Msa0746420:CDS | 30.0% |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr5_1:68589706-68589725 | None:intergenic | 30.0% | |
| ! | ATTTTCCATAGGACAAATGA+TGG | - | chr5_1:68589710-68589729 | Msa0746420:CDS | 30.0% |
| ATATACCATCATTTGTCCTA+TGG | + | chr5_1:68589718-68589737 | None:intergenic | 30.0% | |
| GGTGGAGAAAAAAAATTACA+AGG | + | chr5_1:68590282-68590301 | None:intergenic | 30.0% | |
| ! | GCTTGTTGGTTAATAATACT+TGG | - | chr5_1:68590328-68590347 | Msa0746420:CDS | 30.0% |
| ATCTGATTGAGCTAAAGTAT+AGG | - | chr5_1:68590397-68590416 | Msa0746420:CDS | 30.0% | |
| CAGTTAGTAATTTATCACTC+AGG | - | chr5_1:68590429-68590448 | Msa0746420:CDS | 30.0% | |
| AAAGTAAAAACAGTATGCAC+AGG | + | chr5_1:68590459-68590478 | None:intergenic | 30.0% | |
| ! | CATTCCTTTAGATTTTCCAT+AGG | - | chr5_1:68589699-68589718 | Msa0746420:CDS | 30.0% |
| TTGTCCTATGGAAAATCTAA+AGG | + | chr5_1:68589706-68589725 | None:intergenic | 30.0% | |
| ATCTGATTGAGCTAAAGTAT+AGG | - | chr5_1:68590397-68590416 | Msa0746420:CDS | 30.0% | |
| TGAGTCAATAATTATCACTC+AGG | - | chr5_1:68590735-68590754 | Msa0746420:intron | 30.0% | |
| AAAGTAAAAACAGTATGCAC+AGG | + | chr5_1:68590459-68590478 | None:intergenic | 30.0% | |
| ! | ATGCTACTTCCTTACTTAAA+TGG | - | chr5_1:68590880-68590899 | Msa0746420:intron | 30.0% |
| AGAAAACAAGAAATCTGAGA+CGG | - | chr5_1:68591150-68591169 | Msa0746420:intron | 30.0% | |
| ! | ATAGACTTTCCTTAATGGAT+AGG | - | chr5_1:68591405-68591424 | Msa0746420:intron | 30.0% |
| ATAAAATGTAGCAGCCATAA+TGG | + | chr5_1:68591497-68591516 | None:intergenic | 30.0% | |
| !! | ATGGCTGCTACATTTTATTT+TGG | - | chr5_1:68591499-68591518 | Msa0746420:intron | 30.0% |
| TTTACACATAACTGTCTCTA+AGG | + | chr5_1:68591636-68591655 | None:intergenic | 30.0% | |
| ATGTGTAAATTTCATCACAG+CGG | - | chr5_1:68591647-68591666 | Msa0746420:intron | 30.0% | |
| !! | GGTGGTATTGGGTTTTTATT+AGG | + | chr5_1:68586325-68586344 | None:intergenic | 35.0% |
| TTTGGGTATTACAAGGGTTA+GGG | + | chr5_1:68586359-68586378 | None:intergenic | 35.0% | |
| !! | TTTTGGGTATTACAAGGGTT+AGG | + | chr5_1:68586360-68586379 | None:intergenic | 35.0% |
| !! | TAGGAATCGATAATGGAGTA+AGG | + | chr5_1:68586494-68586513 | None:intergenic | 35.0% |
| TTCACTTTGATCTTTGCTCA+AGG | - | chr5_1:68586670-68586689 | Msa0746420:three_prime_UTR | 35.0% | |
| GAAAAAGTAAAGGAGCAAGT+TGG | + | chr5_1:68586717-68586736 | None:intergenic | 35.0% | |
| CATAGTTAGGTTTGAGCTAA+GGG | + | chr5_1:68587295-68587314 | None:intergenic | 35.0% | |
| ACATAGTTAGGTTTGAGCTA+AGG | + | chr5_1:68587296-68587315 | None:intergenic | 35.0% | |
| TATGTCAGTGCTACATAGTT+AGG | + | chr5_1:68587308-68587327 | None:intergenic | 35.0% | |
| !!! | TAACTGATTTGACCCTTTTG+TGG | - | chr5_1:68587522-68587541 | Msa0746420:intron | 35.0% |
| TGTGGTTTATTTGTAGATGG+AGG | - | chr5_1:68587540-68587559 | Msa0746420:intron | 35.0% | |
| !! | AAAACTGTTGGTTCTGAACA+AGG | - | chr5_1:68587601-68587620 | Msa0746420:intron | 35.0% |
| AGATGATGAGTCTTCTTCAA+TGG | - | chr5_1:68587645-68587664 | Msa0746420:intron | 35.0% | |
| GGATTTGTAAATTCATAGGG+AGG | + | chr5_1:68587709-68587728 | None:intergenic | 35.0% | |
| GGACTTACTGATGAGTAATT+TGG | - | chr5_1:68587837-68587856 | Msa0746420:intron | 35.0% | |
| !! | AAGAAGGTTGTTGATTTAGG+AGG | - | chr5_1:68587883-68587902 | Msa0746420:intron | 35.0% |
| CAACACACTGAATACTTTGA+AGG | - | chr5_1:68587987-68588006 | Msa0746420:intron | 35.0% | |
| ! | ACACACTGAATACTTTGAAG+GGG | - | chr5_1:68587989-68588008 | Msa0746420:intron | 35.0% |
| GCAGTTACTGCATTATAGTT+TGG | - | chr5_1:68588056-68588075 | Msa0746420:intron | 35.0% | |
| TATAGTTTGGTAGAGATGCT+CGG | - | chr5_1:68588069-68588088 | Msa0746420:intron | 35.0% | |
| CATTGCTTCAGTTACTGTTA+AGG | + | chr5_1:68588118-68588137 | None:intergenic | 35.0% | |
| TAACAGTAACTGAAGCAATG+TGG | - | chr5_1:68588118-68588137 | Msa0746420:intron | 35.0% | |
| AACAGTAACTGAAGCAATGT+GGG | - | chr5_1:68588119-68588138 | Msa0746420:intron | 35.0% | |
| AACTTTCACAAATATCTCCC+AGG | - | chr5_1:68588296-68588315 | Msa0746420:intron | 35.0% | |
| ! | GCACTGATGTAAACTCTTTA+TGG | + | chr5_1:68588368-68588387 | None:intergenic | 35.0% |
| AAGAGTTTACATCAGTGCTT+AGG | - | chr5_1:68588370-68588389 | Msa0746420:intron | 35.0% | |
| AGAGTTTACATCAGTGCTTA+GGG | - | chr5_1:68588371-68588390 | Msa0746420:intron | 35.0% | |
| ATGAAAGAACCTAAAGCTTG+TGG | - | chr5_1:68588408-68588427 | Msa0746420:intron | 35.0% | |
| !! | TTCTGATTTGGAACTTCAGA+TGG | + | chr5_1:68588504-68588523 | None:intergenic | 35.0% |
| ! | CCACGTTTCATTTTCTGATT+TGG | + | chr5_1:68588516-68588535 | None:intergenic | 35.0% |
| CCAAATCAGAAAATGAAACG+TGG | - | chr5_1:68588513-68588532 | Msa0746420:intron | 35.0% | |
| ACAAAAGGAGTTAGTATAGC+AGG | - | chr5_1:68588546-68588565 | Msa0746420:intron | 35.0% | |
| !!! | GAATGGCTTAGGTTTTGATT+TGG | + | chr5_1:68588679-68588698 | None:intergenic | 35.0% |
| AAGGTTCAAAATTACTGTGC+TGG | - | chr5_1:68588714-68588733 | Msa0746420:intron | 35.0% | |
| TATTCCCTTTAATGAGGCTT+TGG | - | chr5_1:68588737-68588756 | Msa0746420:intron | 35.0% | |
| ATTCCCTTTAATGAGGCTTT+GGG | - | chr5_1:68588738-68588757 | Msa0746420:intron | 35.0% | |
| TACCTGCATAACCTTCTTAT+TGG | + | chr5_1:68588862-68588881 | None:intergenic | 35.0% | |
| ! | AAAGTTAGCTAACTTGCATC+AGG | - | chr5_1:68589235-68589254 | Msa0746420:CDS | 35.0% |
| TTGCATCAGGAGATAGAAAA+GGG | - | chr5_1:68589248-68589267 | Msa0746420:CDS | 35.0% | |
| AAATCTTCTAGCCAATACTG+AGG | - | chr5_1:68589274-68589293 | Msa0746420:CDS | 35.0% | |
| AATTCCACATACCTCAGTAT+TGG | + | chr5_1:68589288-68589307 | None:intergenic | 35.0% | |
| GTCAGAATAATAGAGTAGGT+AGG | + | chr5_1:68589401-68589420 | None:intergenic | 35.0% | |
| ATAGGCACCTAAAAAAGACA+TGG | - | chr5_1:68589447-68589466 | Msa0746420:CDS | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr5_1:68589691-68589710 | None:intergenic | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr5_1:68589691-68589710 | None:intergenic | 35.0% | |
| !!! | GTTTAATTTTTTTGGGGTGC+TGG | - | chr5_1:68590006-68590025 | Msa0746420:CDS | 35.0% |
| !! | GGTTGCTAGTTCTTTTCTTA+GGG | - | chr5_1:68590201-68590220 | Msa0746420:CDS | 35.0% |
| !! | GTTGCTAGTTCTTTTCTTAG+GGG | - | chr5_1:68590202-68590221 | Msa0746420:CDS | 35.0% |
| !!! | TTCTTAGGGGTGGTTTTTTA+AGG | - | chr5_1:68590215-68590234 | Msa0746420:CDS | 35.0% |
| !!! | TCTTAGGGGTGGTTTTTTAA+GGG | - | chr5_1:68590216-68590235 | Msa0746420:CDS | 35.0% |
| TGAGCTAAAGTATAGGAACA+AGG | - | chr5_1:68590404-68590423 | Msa0746420:CDS | 35.0% | |
| ATGAGTTAAACACTCATGGT+TGG | + | chr5_1:68590536-68590555 | None:intergenic | 35.0% | |
| ACCATGAGTGTTTAACTCAT+AGG | - | chr5_1:68590536-68590555 | Msa0746420:CDS | 35.0% | |
| TCTAAAGGAATGCAAAACAC+TGG | + | chr5_1:68589691-68589710 | None:intergenic | 35.0% | |
| TTGAGCTAAAGTATAGGAAC+AGG | - | chr5_1:68590403-68590422 | Msa0746420:CDS | 35.0% | |
| TGAGCTAAAGTATAGGAACA+GGG | - | chr5_1:68590404-68590423 | Msa0746420:CDS | 35.0% | |
| ATTACAGGGTAGAGTGAAAA+AGG | - | chr5_1:68590910-68590929 | Msa0746420:intron | 35.0% | |
| !! | CACAGATGGAGTACTTATTT+TGG | + | chr5_1:68591125-68591144 | None:intergenic | 35.0% |
| CAAAATAAGTACTCCATCTG+TGG | - | chr5_1:68591123-68591142 | Msa0746420:intron | 35.0% | |
| ! | TTGTTTTCTTTCACCACAGA+TGG | + | chr5_1:68591139-68591158 | None:intergenic | 35.0% |
| ATGAATCCTAAATTCGATGG+TGG | + | chr5_1:68591359-68591378 | None:intergenic | 35.0% | |
| AGGATTCATGCCAAATTTCT+TGG | - | chr5_1:68591370-68591389 | Msa0746420:intron | 35.0% | |
| GGATTCATGCCAAATTTCTT+GGG | - | chr5_1:68591371-68591390 | Msa0746420:intron | 35.0% | |
| TTCACGATTCCTATCCATTA+AGG | + | chr5_1:68591417-68591436 | None:intergenic | 35.0% | |
| GAAGGTCATTTACACCATTA+TGG | - | chr5_1:68591480-68591499 | Msa0746420:intron | 35.0% | |
| !!! | ATTTCCTATTTTGGGGTGAA+GGG | + | chr5_1:68591573-68591592 | None:intergenic | 35.0% |
| !!! | TATTTCCTATTTTGGGGTGA+AGG | + | chr5_1:68591574-68591593 | None:intergenic | 35.0% |
| AATAGCACAGAGAAACTTGA+TGG | - | chr5_1:68591675-68591694 | Msa0746420:intron | 35.0% | |
| !! | ACTTGTTTCTTTTTACTCGC+TGG | - | chr5_1:68591769-68591788 | Msa0746420:five_prime_UTR | 35.0% |
| !! | CTTGTTTCTTTTTACTCGCT+GGG | - | chr5_1:68591770-68591789 | Msa0746420:five_prime_UTR | 35.0% |
| ! | AGGTGAAGTAATATGGATTG+TGG | + | chr5_1:68591896-68591915 | None:intergenic | 35.0% |
| CACTTCAAGGTGAAGTAATA+TGG | + | chr5_1:68591903-68591922 | None:intergenic | 35.0% | |
| GTTAAGAGTGAAGGAAGCAA+CGG | - | chr5_1:68586273-68586292 | Msa0746420:three_prime_UTR | 40.0% | |
| TTGGGTATTACAAGGGTTAG+GGG | + | chr5_1:68586358-68586377 | None:intergenic | 40.0% | |
| !!! | GTGGGTTTTGGGTATTACAA+GGG | + | chr5_1:68586365-68586384 | None:intergenic | 40.0% |
| !!! | TGTGGGTTTTGGGTATTACA+AGG | + | chr5_1:68586366-68586385 | None:intergenic | 40.0% |
| TGGAGTAAGGAACGAAATGA+AGG | + | chr5_1:68586481-68586500 | None:intergenic | 40.0% | |
| CTTCTGATCAAAGACGTTTC+AGG | + | chr5_1:68586931-68586950 | None:intergenic | 40.0% | |
| ! | ACGTCTTTGATCAGAAGTGT+CGG | - | chr5_1:68586934-68586953 | Msa0746420:CDS | 40.0% |
| TAGTCGATGTGTGAGTGTTA+TGG | + | chr5_1:68587345-68587364 | None:intergenic | 40.0% | |
| ! | ACGTATTCGATCAGAAGTGT+CGG | - | chr5_1:68587417-68587436 | Msa0746420:intron | 40.0% |
| TAGATGGAGGTGATAGACAA+GGG | - | chr5_1:68587553-68587572 | Msa0746420:intron | 40.0% | |
| TCTTCAATGGTTACCGAAGA+TGG | - | chr5_1:68587658-68587677 | Msa0746420:intron | 40.0% | |
| CACACTTAAGGAACCATCTT+CGG | + | chr5_1:68587674-68587693 | None:intergenic | 40.0% | |
| GAAATCATCCTCCACACTTA+AGG | + | chr5_1:68587686-68587705 | None:intergenic | 40.0% | |
| TGAAGATTGGAAGGATCCTA+TGG | - | chr5_1:68587801-68587820 | Msa0746420:intron | 40.0% | |
| CAGTCAAGAAATGGCTGAAA+TGG | - | chr5_1:68587909-68587928 | Msa0746420:intron | 40.0% | |
| GTACAAGGACTTCCTTGAAA+CGG | + | chr5_1:68587935-68587954 | None:intergenic | 40.0% | |
| ! | CTGAATACTTTGAAGGGGAA+AGG | - | chr5_1:68587994-68588013 | Msa0746420:intron | 40.0% |
| !!! | TTAAGGAGGGTTTTAGTTCC+CGG | + | chr5_1:68588101-68588120 | None:intergenic | 40.0% |
| GCTTCAGTTACTGTTAAGGA+GGG | + | chr5_1:68588114-68588133 | None:intergenic | 40.0% | |
| TGCTTCAGTTACTGTTAAGG+AGG | + | chr5_1:68588115-68588134 | None:intergenic | 40.0% | |
| ! | TGATTTGGAACTTCAGATGG+TGG | + | chr5_1:68588501-68588520 | None:intergenic | 40.0% |
| GGGTAAAGCTGAATCATCAT+TGG | + | chr5_1:68588589-68588608 | None:intergenic | 40.0% | |
| GTAGATGTTGCATCCTTTGT+GGG | + | chr5_1:68588636-68588655 | None:intergenic | 40.0% | |
| AGTAGATGTTGCATCCTTTG+TGG | + | chr5_1:68588637-68588656 | None:intergenic | 40.0% | |
| !! | GATTTGGCTGTTTTCACTGT+TGG | + | chr5_1:68588663-68588682 | None:intergenic | 40.0% |
| TGCTGGTATTCCCTTTAATG+AGG | - | chr5_1:68588731-68588750 | Msa0746420:intron | 40.0% | |
| TTGCCCAAAGCCTCATTAAA+GGG | + | chr5_1:68588744-68588763 | None:intergenic | 40.0% | |
| TAGAAGAGAATGCTGAGAAG+AGG | - | chr5_1:68588964-68588983 | Msa0746420:CDS | 40.0% | |
| CAGAATGAGTATGGAAGAAG+TGG | + | chr5_1:68589042-68589061 | None:intergenic | 40.0% | |
| CACTTCTTCCATACTCATTC+TGG | - | chr5_1:68589040-68589059 | Msa0746420:CDS | 40.0% | |
| TTCTTCCATACTCATTCTGG+AGG | - | chr5_1:68589043-68589062 | Msa0746420:CDS | 40.0% | |
| CTTGCATCAGGAGATAGAAA+AGG | - | chr5_1:68589247-68589266 | Msa0746420:CDS | 40.0% | |
| TGCATCAGGAGATAGAAAAG+GGG | - | chr5_1:68589249-68589268 | Msa0746420:CDS | 40.0% | |
| TAGGTAGGTACTCAAGATAC+GGG | + | chr5_1:68589386-68589405 | None:intergenic | 40.0% | |
| GTAGGTAGGTACTCAAGATA+CGG | + | chr5_1:68589387-68589406 | None:intergenic | 40.0% | |
| GACCGTCAGAATAATAGAGT+AGG | + | chr5_1:68589405-68589424 | None:intergenic | 40.0% | |
| !!! | GAAGTCGCCATGTCTTTTTT+AGG | + | chr5_1:68589457-68589476 | None:intergenic | 40.0% |
| TCACCTATGTTTGCAGTACA+CGG | + | chr5_1:68589546-68589565 | None:intergenic | 40.0% | |
| TCACCTATGTTTGCAGTACA+CGG | + | chr5_1:68589546-68589565 | None:intergenic | 40.0% | |
| !!! | TGGAGAGAGCAGTTTTGTTT+CGG | - | chr5_1:68590049-68590068 | Msa0746420:CDS | 40.0% |
| !!! | TCAGCAGTTTTGCTGTTTTC+TGG | - | chr5_1:68590094-68590113 | Msa0746420:CDS | 40.0% |
| ACAGAAGCAATCAGCAACTA+AGG | + | chr5_1:68590132-68590151 | None:intergenic | 40.0% | |
| ! | TTAGTTGCTGATTGCTTCTG+TGG | - | chr5_1:68590131-68590150 | Msa0746420:CDS | 40.0% |
| ! | GTTTTGTGTGTAGTGACTGT+TGG | - | chr5_1:68590153-68590172 | Msa0746420:CDS | 40.0% |
| !! | GGGTTGCTAGTTCTTTTCTT+AGG | - | chr5_1:68590200-68590219 | Msa0746420:CDS | 40.0% |
| !!! | CTTAGGGGTGGTTTTTTAAG+GGG | - | chr5_1:68590217-68590236 | Msa0746420:CDS | 40.0% |
| GCCTATGAGTTAAACACTCA+TGG | + | chr5_1:68590540-68590559 | None:intergenic | 40.0% | |
| TAGTCAACTGCAGGAATATG+TGG | - | chr5_1:68591045-68591064 | Msa0746420:intron | 40.0% | |
| GCTGTGCTAAGACTAAAATC+TGG | - | chr5_1:68591097-68591116 | Msa0746420:intron | 40.0% | |
| TCATGGAGCTCATTGCAATT+CGG | + | chr5_1:68591301-68591320 | None:intergenic | 40.0% | |
| GGCATGAATCCTAAATTCGA+TGG | + | chr5_1:68591362-68591381 | None:intergenic | 40.0% | |
| AATGGATAGGAATCGTGAAG+TGG | - | chr5_1:68591418-68591437 | Msa0746420:intron | 40.0% | |
| TTAGTTCAGAGGATTCTCCA+AGG | - | chr5_1:68591446-68591465 | Msa0746420:intron | 40.0% | |
| ! | TCCAAGGAGGTTCATTTTGA+AGG | - | chr5_1:68591462-68591481 | Msa0746420:intron | 40.0% |
| ACCTTCAAAATGAACCTCCT+TGG | + | chr5_1:68591466-68591485 | None:intergenic | 40.0% | |
| ! | TTTTTACTCGCTGGGTTGTT+TGG | - | chr5_1:68591778-68591797 | Msa0746420:five_prime_UTR | 40.0% |
| ! | TTTTACTCGCTGGGTTGTTT+GGG | - | chr5_1:68591779-68591798 | Msa0746420:five_prime_UTR | 40.0% |
| TATTACAAGGGTTAGGGGTG+CGG | + | chr5_1:68586353-68586372 | None:intergenic | 45.0% | |
| ! | GTGTTTTCGTCTTTCGCTGT+GGG | + | chr5_1:68586383-68586402 | None:intergenic | 45.0% |
| ! | TGTGTTTTCGTCTTTCGCTG+TGG | + | chr5_1:68586384-68586403 | None:intergenic | 45.0% |
| CTCACTCACTCAAACACACA+TGG | + | chr5_1:68586422-68586441 | None:intergenic | 45.0% | |
| ! | AAGGTACCTGGTTGTGATGA+TGG | + | chr5_1:68586462-68586481 | None:intergenic | 45.0% |
| !! | AGGAACGAAATGAAGGTACC+TGG | + | chr5_1:68586474-68586493 | None:intergenic | 45.0% |
| CGTAGTTGGGAACACAGTAA+TGG | + | chr5_1:68586787-68586806 | None:intergenic | 45.0% | |
| GAAACCACATGTGTCAGTGT+CGG | - | chr5_1:68586884-68586903 | Msa0746420:CDS | 45.0% | |
| !! | ATCAGAAGTGTCGGTTACAG+AGG | - | chr5_1:68586943-68586962 | Msa0746420:CDS | 45.0% |
| TGTGTCAGTGCTGCATAGTT+GGG | + | chr5_1:68587035-68587054 | None:intergenic | 45.0% | |
| !! | ATCAGAAGTGTCAGTGCTAC+AGG | - | chr5_1:68587146-68587165 | Msa0746420:CDS | 45.0% |
| !! | TCAGAAGTGTCAGTGCTACA+GGG | - | chr5_1:68587147-68587166 | Msa0746420:CDS | 45.0% |
| TAAGGGACTAAAGGAGTTGG+GGG | + | chr5_1:68587278-68587297 | None:intergenic | 45.0% | |
| CTAAGGGACTAAAGGAGTTG+GGG | + | chr5_1:68587279-68587298 | None:intergenic | 45.0% | |
| GCTAAGGGACTAAAGGAGTT+GGG | + | chr5_1:68587280-68587299 | None:intergenic | 45.0% | |
| AGCTAAGGGACTAAAGGAGT+TGG | + | chr5_1:68587281-68587300 | None:intergenic | 45.0% | |
| GGTTTGAGCTAAGGGACTAA+AGG | + | chr5_1:68587287-68587306 | None:intergenic | 45.0% | |
| CGATGTGTGAGTGTTATGGT+CGG | + | chr5_1:68587341-68587360 | None:intergenic | 45.0% | |
| GTAGATGGAGGTGATAGACA+AGG | - | chr5_1:68587552-68587571 | Msa0746420:intron | 45.0% | |
| CGAAGATGGTTCCTTAAGTG+TGG | - | chr5_1:68587672-68587691 | Msa0746420:intron | 45.0% | |
| AGATGGTTCCTTAAGTGTGG+AGG | - | chr5_1:68587675-68587694 | Msa0746420:intron | 45.0% | |
| AGCTTCGATTCAGCGGAATT+AGG | - | chr5_1:68587733-68587752 | Msa0746420:intron | 45.0% | |
| GCTTCGATTCAGCGGAATTA+GGG | - | chr5_1:68587734-68587753 | Msa0746420:intron | 45.0% | |
| GATTCAGCGGAATTAGGGTT+AGG | - | chr5_1:68587739-68587758 | Msa0746420:intron | 45.0% | |
| AGGAGGCTACAGTCAAGAAA+TGG | - | chr5_1:68587900-68587919 | Msa0746420:intron | 45.0% | |
| ACACGAGTCATTTCACCAGA+AGG | - | chr5_1:68588168-68588187 | Msa0746420:intron | 45.0% | |
| ACCTAAAGCTTGTGGCAAAG+CGG | - | chr5_1:68588416-68588435 | Msa0746420:intron | 45.0% | |
| GGCAAAGCGGGTGTTAAATT+AGG | - | chr5_1:68588429-68588448 | Msa0746420:intron | 45.0% | |
| GGAAAGCTTACAAGCGTAAG+TGG | - | chr5_1:68588450-68588469 | Msa0746420:intron | 45.0% | |
| CGTGGCTCCTCAAATACAAA+AGG | - | chr5_1:68588531-68588550 | Msa0746420:intron | 45.0% | |
| GATGATTCAGCTTTACCCGA+AGG | - | chr5_1:68588591-68588610 | Msa0746420:intron | 45.0% | |
| CGCTGCAAAATTACCCACAA+AGG | - | chr5_1:68588620-68588639 | Msa0746420:intron | 45.0% | |
| ! | TTTTGAGCGGAAGAGGAGAA+TGG | + | chr5_1:68588696-68588715 | None:intergenic | 45.0% |
| ATTCTCCTCTTCCGCTCAAA+AGG | - | chr5_1:68588695-68588714 | Msa0746420:intron | 45.0% | |
| ! | TTGAACCTTTTGAGCGGAAG+AGG | + | chr5_1:68588703-68588722 | None:intergenic | 45.0% |
| CTTGCCCAAAGCCTCATTAA+AGG | + | chr5_1:68588745-68588764 | None:intergenic | 45.0% | |
| CTTTGGGCAAGTTTATCCCA+CGG | - | chr5_1:68588754-68588773 | Msa0746420:intron | 45.0% | |
| TTTGGGCAAGTTTATCCCAC+GGG | - | chr5_1:68588755-68588774 | Msa0746420:intron | 45.0% | |
| ATCTCGAGCACAAGAATTGC+AGG | - | chr5_1:68588809-68588828 | Msa0746420:intron | 45.0% | |
| AGCACAAGAATTGCAGGATG+AGG | - | chr5_1:68588815-68588834 | Msa0746420:intron | 45.0% | |
| GAATGACTGGGCCAATAAGA+AGG | - | chr5_1:68588848-68588867 | Msa0746420:intron | 45.0% | |
| GGCCAATAAGAAGGTTATGC+AGG | - | chr5_1:68588857-68588876 | Msa0746420:intron | 45.0% | |
| AGATAAGCTTCGCAAGCTTC+AGG | - | chr5_1:68588884-68588903 | Msa0746420:intron | 45.0% | |
| ! | TGAGAAGAGGATCTCTGAAG+TGG | - | chr5_1:68588977-68588996 | Msa0746420:CDS | 45.0% |
| CTTTGCCTCCAGAATGAGTA+TGG | + | chr5_1:68589051-68589070 | None:intergenic | 45.0% | |
| GTCCTTGCTAGAGAAAGAGT+TGG | - | chr5_1:68589073-68589092 | Msa0746420:CDS | 45.0% | |
| CACCAACTCTTTCTCTAGCA+AGG | + | chr5_1:68589078-68589097 | None:intergenic | 45.0% | |
| ! | GTCGTTGGCTGAAAAGTCAA+TGG | - | chr5_1:68589106-68589125 | Msa0746420:CDS | 45.0% |
| GGCAAGTTATCAACAAGCAC+TGG | - | chr5_1:68589127-68589146 | Msa0746420:CDS | 45.0% | |
| CTAGCCAATACTGAGGTATG+TGG | - | chr5_1:68589281-68589300 | Msa0746420:CDS | 45.0% | |
| TAGCCGTGTACTGCAAACAT+AGG | - | chr5_1:68589540-68589559 | Msa0746420:CDS | 45.0% | |
| GCAAACATAGGTGAGATGAG+CGG | - | chr5_1:68589552-68589571 | Msa0746420:CDS | 45.0% | |
| TAGCCGTGTACTGCAAACAT+AGG | - | chr5_1:68589540-68589559 | Msa0746420:CDS | 45.0% | |
| GCAAACATAGGTGAGATGAG+CGG | - | chr5_1:68589552-68589571 | Msa0746420:CDS | 45.0% | |
| !!! | AGAGCAGTTTTGTTTCGGTG+TGG | - | chr5_1:68590054-68590073 | Msa0746420:CDS | 45.0% |
| !! | TTTTGTTTCGGTGTGGTGCT+GGG | - | chr5_1:68590061-68590080 | Msa0746420:CDS | 45.0% |
| GCAAAACTGCTGACCGAAAA+AGG | + | chr5_1:68590087-68590106 | None:intergenic | 45.0% | |
| ! | AGTGACTGTTGGAGCTTTGT+TGG | - | chr5_1:68590164-68590183 | Msa0746420:CDS | 45.0% |
| !! | ACTGTTGGAGCTTTGTTGGT+TGG | - | chr5_1:68590168-68590187 | Msa0746420:CDS | 45.0% |
| !! | TTTGTTGGTTGGTAGTCCAG+TGG | - | chr5_1:68590179-68590198 | Msa0746420:CDS | 45.0% |
| !! | TTGTTGGTTGGTAGTCCAGT+GGG | - | chr5_1:68590180-68590199 | Msa0746420:CDS | 45.0% |
| GAAAAGAACTAGCAACCCAC+TGG | + | chr5_1:68590198-68590217 | None:intergenic | 45.0% | |
| !! | GCTAGTTCTTTTCTTAGGGG+TGG | - | chr5_1:68590205-68590224 | Msa0746420:CDS | 45.0% |
| ! | TAAGGGGTTTTTGTTCGAGC+CGG | - | chr5_1:68590233-68590252 | Msa0746420:CDS | 45.0% |
| CAAGGCGCACTAATAAGCTT+GGG | + | chr5_1:68590303-68590322 | None:intergenic | 45.0% | |
| GACAGAAAAAATCCTCGCAC+AGG | - | chr5_1:68590943-68590962 | Msa0746420:intron | 45.0% | |
| ! | TGAAGCACTCATGAAAGCTG+AGG | - | chr5_1:68590997-68591016 | Msa0746420:intron | 45.0% |
| ACTAGCTGCCTTCTTTCTGA+CGG | + | chr5_1:68591029-68591048 | None:intergenic | 45.0% | |
| CAGCATGGTAAAGCTAGAGA+AGG | - | chr5_1:68591069-68591088 | Msa0746420:intron | 45.0% | |
| AATGAGCTCCATGAGAAGCA+AGG | - | chr5_1:68591307-68591326 | Msa0746420:intron | 45.0% | |
| ATGAGCTCCATGAGAAGCAA+GGG | - | chr5_1:68591308-68591327 | Msa0746420:intron | 45.0% | |
| TGAAGGAATGCCCTTCATGT+AGG | - | chr5_1:68591332-68591351 | Msa0746420:intron | 45.0% | |
| GTAGGACCACCATCGAATTT+AGG | - | chr5_1:68591350-68591369 | Msa0746420:intron | 45.0% | |
| CTACTGCTGCCCAAGAAATT+TGG | + | chr5_1:68591383-68591402 | None:intergenic | 45.0% | |
| AAGTGGTGCAGTTAGTTCAG+AGG | - | chr5_1:68591435-68591454 | Msa0746420:intron | 45.0% | |
| !! | TATCCCTGTTTTGTTCCTGC+AGG | - | chr5_1:68591837-68591856 | Msa0746420:five_prime_UTR | 45.0% |
| AAGCCTGCAGGAACAAAACA+GGG | + | chr5_1:68591843-68591862 | None:intergenic | 45.0% | |
| ! | GCTTGTCAGGTTGTTATGTG+AGG | - | chr5_1:68591859-68591878 | Msa0746420:five_prime_UTR | 45.0% |
| AGGTTGTTATGTGAGGCTCA+AGG | - | chr5_1:68591866-68591885 | Msa0746420:five_prime_UTR | 45.0% | |
| GAAACGGGGGTTAAGAGTGA+AGG | - | chr5_1:68586264-68586283 | Msa0746420:three_prime_UTR | 50.0% | |
| ! | CGTCTTTCGCTGTGGGTTTT+GGG | + | chr5_1:68586376-68586395 | None:intergenic | 50.0% |
| ! | TCGTCTTTCGCTGTGGGTTT+TGG | + | chr5_1:68586377-68586396 | None:intergenic | 50.0% |
| !! | CCTGGTTGTGATGATGGTGA+AGG | + | chr5_1:68586456-68586475 | None:intergenic | 50.0% |
| CCTTCACCATCATCACAACC+AGG | - | chr5_1:68586453-68586472 | Msa0746420:three_prime_UTR | 50.0% | |
| TGTTCCCAACTACGTAGCAC+TGG | - | chr5_1:68586793-68586812 | Msa0746420:CDS | 50.0% | |
| TGTGCCAGTGCTACGTAGTT+GGG | + | chr5_1:68586800-68586819 | None:intergenic | 50.0% | |
| ACTGGCACAGACATGAACAC+CGG | - | chr5_1:68586811-68586830 | Msa0746420:CDS | 50.0% | |
| GTCGATGTGTGTGTCATGTC+CGG | + | chr5_1:68586833-68586852 | None:intergenic | 50.0% | |
| GTCGGACACTTGACACATGT+CGG | - | chr5_1:68586902-68586921 | Msa0746420:CDS | 50.0% | |
| CTGTGTCAGTGCTGCATAGT+TGG | + | chr5_1:68587036-68587055 | None:intergenic | 50.0% | |
| !! | ATGCAGCACTGACACAGACA+CGG | - | chr5_1:68587039-68587058 | Msa0746420:CDS | 50.0% |
| GGAATCACATGTGTCTGCGT+CGG | - | chr5_1:68587105-68587124 | Msa0746420:CDS | 50.0% | |
| !! | CAGAAGTGTCAGTGCTACAG+GGG | - | chr5_1:68587148-68587167 | Msa0746420:CDS | 50.0% |
| AGTTGGGGGGTTAAAGTACG+AGG | + | chr5_1:68587264-68587283 | None:intergenic | 50.0% | |
| AAGGGACTAAAGGAGTTGGG+GGG | + | chr5_1:68587277-68587296 | None:intergenic | 50.0% | |
| !! | CAGAAGTGTCGGTGCTATAG+AGG | - | chr5_1:68587428-68587447 | Msa0746420:intron | 50.0% |
| TCCGCAAAGCTTCGATTCAG+CGG | - | chr5_1:68587726-68587745 | Msa0746420:intron | 50.0% | |
| TCCGCTGAATCGAAGCTTTG+CGG | + | chr5_1:68587730-68587749 | None:intergenic | 50.0% | |
| ACAACATTTGGGTGTGCTCG+AGG | - | chr5_1:68587777-68587796 | Msa0746420:intron | 50.0% | |
| GTGTGCTCGAGGTTGAAGAT+TGG | - | chr5_1:68587788-68587807 | Msa0746420:intron | 50.0% | |
| GCTCGAGGTTGAAGATTGGA+AGG | - | chr5_1:68587792-68587811 | Msa0746420:intron | 50.0% | |
| TCCTATGGCAACTCAGCTTG+AGG | - | chr5_1:68587816-68587835 | Msa0746420:intron | 50.0% | |
| TCCTCAAGCTGAGTTGCCAT+AGG | + | chr5_1:68587820-68587839 | None:intergenic | 50.0% | |
| TGGCTGAAATGGCCGTTTCA+AGG | - | chr5_1:68587920-68587939 | Msa0746420:intron | 50.0% | |
| AGGAAGTCCTTGTACGCAGA+AGG | - | chr5_1:68587940-68587959 | Msa0746420:intron | 50.0% | |
| !! | TAGAGATGCTCGGTGTACTC+CGG | - | chr5_1:68588079-68588098 | Msa0746420:intron | 50.0% |
| TGAAGCAATGTGGGAGTTGC+TGG | - | chr5_1:68588128-68588147 | Msa0746420:intron | 50.0% | |
| TCACCAGAAGGTCAACTGAG+TGG | - | chr5_1:68588180-68588199 | Msa0746420:intron | 50.0% | |
| CCTAAAGCTTGTGGCAAAGC+GGG | - | chr5_1:68588417-68588436 | Msa0746420:intron | 50.0% | |
| GATTCAGCTTTACCCGAAGG+AGG | - | chr5_1:68588594-68588613 | Msa0746420:intron | 50.0% | |
| ! | TTTTGCAGCGCTACCTCCTT+CGG | + | chr5_1:68588610-68588629 | None:intergenic | 50.0% |
| GTTTATCCCACGGGATGAGA+AGG | - | chr5_1:68588764-68588783 | Msa0746420:intron | 50.0% | |
| AGGTGCAAAGCTGGAATGAC+TGG | - | chr5_1:68588835-68588854 | Msa0746420:intron | 50.0% | |
| GGTGCAAAGCTGGAATGACT+GGG | - | chr5_1:68588836-68588855 | Msa0746420:intron | 50.0% | |
| TAAGCTTCGCAAGCTTCAGG+CGG | - | chr5_1:68588887-68588906 | Msa0746420:intron | 50.0% | |
| !! | CTCTGAAGTGGAGAATGCCA+TGG | - | chr5_1:68588989-68589008 | Msa0746420:CDS | 50.0% |
| ! | GTTGGTGTCTGCTAAGTCGT+TGG | - | chr5_1:68589091-68589110 | Msa0746420:CDS | 50.0% |
| CTATTCAACAAGCCCAGTCG+TGG | - | chr5_1:68589165-68589184 | Msa0746420:CDS | 50.0% | |
| ACAAGCCCAGTCGTGGAAAA+CGG | - | chr5_1:68589172-68589191 | Msa0746420:CDS | 50.0% | |
| ! | CAACTCCGTTTTCCACGACT+GGG | + | chr5_1:68589180-68589199 | None:intergenic | 50.0% |
| TAGGTGCCTATGCATGTCCA+GGG | + | chr5_1:68589438-68589457 | None:intergenic | 50.0% | |
| TTAGGTGCCTATGCATGTCC+AGG | + | chr5_1:68589439-68589458 | None:intergenic | 50.0% | |
| !!! | GTTTTGTTTCGGTGTGGTGC+TGG | - | chr5_1:68590060-68590079 | Msa0746420:CDS | 50.0% |
| !!! | TGCTGTTTTCTGGTCTGCTG+CGG | - | chr5_1:68590104-68590123 | Msa0746420:CDS | 50.0% |
| GCAAGGCGCACTAATAAGCT+TGG | + | chr5_1:68590304-68590323 | None:intergenic | 50.0% | |
| GCTTATTAGTGCGCCTTGCA+CGG | - | chr5_1:68590305-68590324 | Msa0746420:CDS | 50.0% | |
| CTTATTAGTGCGCCTTGCAC+GGG | - | chr5_1:68590306-68590325 | Msa0746420:CDS | 50.0% | |
| TTAACCAACAAGCCCGTGCA+AGG | + | chr5_1:68590321-68590340 | None:intergenic | 50.0% | |
| TAAAGTATGCAGCCTGTGCG+AGG | + | chr5_1:68590958-68590977 | None:intergenic | 50.0% | |
| AGCACTCATGAAAGCTGAGG+AGG | - | chr5_1:68591000-68591019 | Msa0746420:intron | 50.0% | |
| GCAGGAATATGTGGACAGCA+TGG | - | chr5_1:68591054-68591073 | Msa0746420:intron | 50.0% | |
| ! | GAAATCTGAGACGGTGACGA+CGG | - | chr5_1:68591159-68591178 | Msa0746420:intron | 50.0% |
| ! | AAATCTGAGACGGTGACGAC+GGG | - | chr5_1:68591160-68591179 | Msa0746420:intron | 50.0% |
| !! | TCCACCAGCTGGTTTGTCTT+GGG | + | chr5_1:68591191-68591210 | None:intergenic | 50.0% |
| !! | TTCCACCAGCTGGTTTGTCT+TGG | + | chr5_1:68591192-68591211 | None:intergenic | 50.0% |
| CAGCTGGTGGAAGATTGAAG+CGG | - | chr5_1:68591200-68591219 | Msa0746420:intron | 50.0% | |
| AGCTGGTGGAAGATTGAAGC+GGG | - | chr5_1:68591201-68591220 | Msa0746420:intron | 50.0% | |
| GTGTGTCATGTGCCTATCAG+AGG | - | chr5_1:68591231-68591250 | Msa0746420:intron | 50.0% | |
| TCATGTGCCTATCAGAGGAG+AGG | - | chr5_1:68591236-68591255 | Msa0746420:intron | 50.0% | |
| ! | TTTTCTGCCATGTGCGCATC+AGG | - | chr5_1:68591267-68591286 | Msa0746420:intron | 50.0% |
| CACAAAACCTGATGCGCACA+TGG | + | chr5_1:68591277-68591296 | None:intergenic | 50.0% | |
| CCTTCATCCCTTGCTTCTCA+TGG | + | chr5_1:68591318-68591337 | None:intergenic | 50.0% | |
| CCATGAGAAGCAAGGGATGA+AGG | - | chr5_1:68591315-68591334 | Msa0746420:intron | 50.0% | |
| ! | CGATGGTGGTCCTACATGAA+GGG | + | chr5_1:68591345-68591364 | None:intergenic | 50.0% |
| ! | TCGATGGTGGTCCTACATGA+AGG | + | chr5_1:68591346-68591365 | None:intergenic | 50.0% |
| GTTCAGAGGATTCTCCAAGG+AGG | - | chr5_1:68591449-68591468 | Msa0746420:intron | 50.0% | |
| !!! | TATTTTGGGGTGAAGGGTGG+GGG | + | chr5_1:68591567-68591586 | None:intergenic | 50.0% |
| !!! | CTATTTTGGGGTGAAGGGTG+GGG | + | chr5_1:68591568-68591587 | None:intergenic | 50.0% |
| !!! | CCTATTTTGGGGTGAAGGGT+GGG | + | chr5_1:68591569-68591588 | None:intergenic | 50.0% |
| !!! | TCCTATTTTGGGGTGAAGGG+TGG | + | chr5_1:68591570-68591589 | None:intergenic | 50.0% |
| CAAGCCTGCAGGAACAAAAC+AGG | + | chr5_1:68591844-68591863 | None:intergenic | 50.0% | |
| TTTGTTCCTGCAGGCTTGTC+AGG | - | chr5_1:68591846-68591865 | Msa0746420:five_prime_UTR | 50.0% | |
| TAACAACCTGACAAGCCTGC+AGG | + | chr5_1:68591855-68591874 | None:intergenic | 50.0% | |
| GAGTGAAGGAAGCAACGGCA+CGG | - | chr5_1:68586278-68586297 | Msa0746420:three_prime_UTR | 55.0% | |
| !! | GTGCGGCTGATGGTGGTATT+GGG | + | chr5_1:68586336-68586355 | None:intergenic | 55.0% |
| CTGTGCCAGTGCTACGTAGT+TGG | + | chr5_1:68586801-68586820 | None:intergenic | 55.0% | |
| GTGTCCGACACTGACACATG+TGG | + | chr5_1:68586891-68586910 | None:intergenic | 55.0% | |
| AGGGTCTCCTTCTGCGTACA+AGG | + | chr5_1:68587950-68587969 | None:intergenic | 55.0% | |
| !! | AGAGATGCTCGGTGTACTCC+GGG | - | chr5_1:68588080-68588099 | Msa0746420:intron | 55.0% |
| CCACCACTCAGTTGACCTTC+TGG | + | chr5_1:68588186-68588205 | None:intergenic | 55.0% | |
| CCAGAAGGTCAACTGAGTGG+TGG | - | chr5_1:68588183-68588202 | Msa0746420:intron | 55.0% | |
| CCCGCTTTGCCACAAGCTTT+AGG | + | chr5_1:68588420-68588439 | None:intergenic | 55.0% | |
| TTTGCAGCGCTACCTCCTTC+GGG | + | chr5_1:68588609-68588628 | None:intergenic | 55.0% | |
| GCGGAAGAGGAGAATGGCTT+AGG | + | chr5_1:68588690-68588709 | None:intergenic | 55.0% | |
| GTTCGTCCTTCTCATCCCGT+GGG | + | chr5_1:68588773-68588792 | None:intergenic | 55.0% | |
| TGTTCGTCCTTCTCATCCCG+TGG | + | chr5_1:68588774-68588793 | None:intergenic | 55.0% | |
| TGCAGGATGAGGTGCAAAGC+TGG | - | chr5_1:68588826-68588845 | Msa0746420:intron | 55.0% | |
| ! | CCAACTCCGTTTTCCACGAC+TGG | + | chr5_1:68589181-68589200 | None:intergenic | 55.0% |
| CCAGTCGTGGAAAACGGAGT+TGG | - | chr5_1:68589178-68589197 | Msa0746420:CDS | 55.0% | |
| AGGTGCCTATGCATGTCCAG+GGG | + | chr5_1:68589437-68589456 | None:intergenic | 55.0% | |
| !! | GTGTGGTGCTGGGCCTTTTT+CGG | - | chr5_1:68590071-68590090 | Msa0746420:CDS | 55.0% |
| GGCGCACTAATAAGCTTGGG+TGG | + | chr5_1:68590300-68590319 | None:intergenic | 55.0% | |
| GGAGGATGCCGTCAGAAAGA+AGG | - | chr5_1:68591018-68591037 | Msa0746420:intron | 55.0% | |
| GAAGGCAGCTAGTCAACTGC+AGG | - | chr5_1:68591036-68591055 | Msa0746420:intron | 55.0% | |
| ! | AATCTGAGACGGTGACGACG+GGG | - | chr5_1:68591161-68591180 | Msa0746420:intron | 55.0% |
| TCCCAAGACAAACCAGCTGG+TGG | - | chr5_1:68591187-68591206 | Msa0746420:intron | 55.0% | |
| CGCTTCAATCTTCCACCAGC+TGG | + | chr5_1:68591202-68591221 | None:intergenic | 55.0% | |
| AGGGTGGGGGAATATGGACT+AGG | + | chr5_1:68591554-68591573 | None:intergenic | 55.0% | |
| CCCACCCTTCACCCCAAAAT+AGG | - | chr5_1:68591566-68591585 | Msa0746420:intron | 55.0% | |
| !! | GGTGCGGCTGATGGTGGTAT+TGG | + | chr5_1:68586337-68586356 | None:intergenic | 60.0% |
| TCGTGCCCCTGGACATGCAT+AGG | - | chr5_1:68589429-68589448 | Msa0746420:CDS | 60.0% | |
| ! | TGTTCGAGCCGGCGCTTTTG+CGG | - | chr5_1:68590244-68590263 | Msa0746420:CDS | 60.0% |
| ! | ATCGGTTGCCGCAAAAGCGC+CGG | + | chr5_1:68590255-68590274 | None:intergenic | 60.0% |
| ! | ATCTGAGACGGTGACGACGG+GGG | - | chr5_1:68591162-68591181 | Msa0746420:intron | 60.0% |
| GGCTCCCAAGACAAACCAGC+TGG | - | chr5_1:68591184-68591203 | Msa0746420:intron | 60.0% | |
| GGGTGAAGGGTGGGGGAATA+TGG | + | chr5_1:68591560-68591579 | None:intergenic | 60.0% | |
| ! | GTTAGGGGTGCGGCTGATGG+TGG | + | chr5_1:68586343-68586362 | None:intergenic | 65.0% |
| ! | AGGGTTAGGGGTGCGGCTGA+TGG | + | chr5_1:68586346-68586365 | None:intergenic | 65.0% |
| TGCGCCTTGCACGGGCTTGT+TGG | - | chr5_1:68590314-68590333 | Msa0746420:CDS | 65.0% | |
| ! | TCTGAGACGGTGACGACGGG+GGG | - | chr5_1:68591163-68591182 | Msa0746420:intron | 65.0% |
| ! | GACGGTCTGACTCGTGCCCC+TGG | - | chr5_1:68589418-68589437 | Msa0746420:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 68586260 | 68591931 | 68586260 | ID=Msa0746420;Name=Msa0746420 |
| chr5_1 | mRNA | 68586260 | 68591931 | 68586260 | ID=Msa0746420-mRNA-1;Parent=Msa0746420;Name=Msa0746420-mRNA-1;_AED=0.01;_eAED=0.01;_QI=261|1|1|1|0.33|0.5|4|529|741 |
| chr5_1 | exon | 68586260 | 68587274 | 68586260 | ID=Msa0746420-mRNA-1:exon:20476;Parent=Msa0746420-mRNA-1 |
| chr5_1 | exon | 68588896 | 68590635 | 68588896 | ID=Msa0746420-mRNA-1:exon:20475;Parent=Msa0746420-mRNA-1 |
| chr5_1 | exon | 68591500 | 68591545 | 68591500 | ID=Msa0746420-mRNA-1:exon:20474;Parent=Msa0746420-mRNA-1 |
| chr5_1 | exon | 68591717 | 68591931 | 68591717 | ID=Msa0746420-mRNA-1:exon:20473;Parent=Msa0746420-mRNA-1 |
| chr5_1 | five_prime_UTR | 68591717 | 68591931 | 68591717 | ID=Msa0746420-mRNA-1:five_prime_utr;Parent=Msa0746420-mRNA-1 |
| chr5_1 | five_prime_UTR | 68591500 | 68591545 | 68591500 | ID=Msa0746420-mRNA-1:five_prime_utr;Parent=Msa0746420-mRNA-1 |
| chr5_1 | CDS | 68588896 | 68590635 | 68588896 | ID=Msa0746420-mRNA-1:cds;Parent=Msa0746420-mRNA-1 |
| chr5_1 | CDS | 68586789 | 68587274 | 68586789 | ID=Msa0746420-mRNA-1:cds;Parent=Msa0746420-mRNA-1 |
| chr5_1 | three_prime_UTR | 68586260 | 68586788 | 68586260 | ID=Msa0746420-mRNA-1:three_prime_utr;Parent=Msa0746420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
