Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073480 | XP_013468153.1 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.51e-81 | 244 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073480 | sp|B0BLT0|ZN593_XENTR | 42.017 | 119 | 54 | 7 | 7 | 119 | 10 | 119 | 3.76e-18 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073480 | I3S1F8 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 1.20e-81 | 244 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0073480 | 0.825757 | 3.938825e-54 | -8.615850e-47 |
| Msa0003780 | Msa0073480 | 0.829171 | 5.976628e-55 | -8.615850e-47 |
| Msa0004860 | Msa0073480 | 0.837606 | 4.706210e-57 | -8.615850e-47 |
| Msa0004920 | Msa0073480 | 0.814636 | 1.392823e-51 | -8.615850e-47 |
| Msa0004980 | Msa0073480 | 0.802982 | 4.332249e-49 | -8.615850e-47 |
| Msa0006290 | Msa0073480 | 0.804316 | 2.290749e-49 | -8.615850e-47 |
| Msa0011960 | Msa0073480 | 0.818941 | 1.506870e-52 | -8.615850e-47 |
| Msa0015300 | Msa0073480 | 0.804107 | 2.531732e-49 | -8.615850e-47 |
| Msa0025730 | Msa0073480 | 0.819452 | 1.153015e-52 | -8.615850e-47 |
| Msa0027260 | Msa0073480 | 0.819458 | 1.149338e-52 | -8.615850e-47 |
| Msa0029260 | Msa0073480 | 0.800557 | 1.362821e-48 | -8.615850e-47 |
| Msa0030380 | Msa0073480 | 0.824142 | 9.475505e-54 | -8.615850e-47 |
| Msa0032090 | Msa0073480 | 0.810783 | 9.707323e-51 | -8.615850e-47 |
| Msa0032260 | Msa0073480 | 0.856684 | 2.724432e-62 | -8.615850e-47 |
| Msa0032580 | Msa0073480 | 0.823382 | 1.427412e-53 | -8.615850e-47 |
| Msa0033260 | Msa0073480 | 0.801099 | 1.056501e-48 | -8.615850e-47 |
| Msa0033980 | Msa0073480 | 0.816577 | 5.146961e-52 | -8.615850e-47 |
| Msa0040690 | Msa0073480 | 0.836282 | 1.025449e-56 | -8.615850e-47 |
| Msa0043660 | Msa0073480 | 0.818124 | 2.308348e-52 | -8.615850e-47 |
| Msa0047160 | Msa0073480 | 0.842458 | 2.553732e-58 | -8.615850e-47 |
| Msa0048180 | Msa0073480 | 0.835089 | 2.055422e-56 | -8.615850e-47 |
| Msa0051770 | Msa0073480 | 0.813652 | 2.296328e-51 | -8.615850e-47 |
| Msa0054750 | Msa0073480 | 0.802390 | 5.740127e-49 | -8.615850e-47 |
| Msa0054780 | Msa0073480 | 0.809875 | 1.524476e-50 | -8.615850e-47 |
| Msa0055180 | Msa0073480 | 0.811982 | 5.331756e-51 | -8.615850e-47 |
| Msa0056470 | Msa0073480 | 0.806826 | 6.813512e-50 | -8.615850e-47 |
| Msa0057140 | Msa0073480 | 0.827745 | 1.320183e-54 | -8.615850e-47 |
| Msa0073480 | Msa0074320 | 0.837665 | 4.546160e-57 | -8.615850e-47 |
| Msa0073480 | Msa0076000 | 0.828111 | 1.077827e-54 | -8.615850e-47 |
| Msa0073480 | Msa0081930 | 0.817060 | 4.011597e-52 | -8.615850e-47 |
| Msa0073480 | Msa0083070 | 0.802721 | 4.904783e-49 | -8.615850e-47 |
| Msa0073480 | Msa0084940 | 0.807991 | 3.855777e-50 | -8.615850e-47 |
| Msa0073480 | Msa0086180 | 0.804543 | 2.053760e-49 | -8.615850e-47 |
| Msa0073480 | Msa0090520 | 0.812096 | 5.034313e-51 | -8.615850e-47 |
| Msa0073480 | Msa0091410 | 0.802718 | 4.910698e-49 | -8.615850e-47 |
| Msa0073480 | Msa0094120 | 0.804542 | 2.054517e-49 | -8.615850e-47 |
| Msa0073480 | Msa0094470 | 0.856535 | 3.012863e-62 | -8.615850e-47 |
| Msa0073480 | Msa0094920 | 0.846689 | 1.855359e-59 | -8.615850e-47 |
| Msa0073480 | Msa0094950 | 0.803702 | 3.073543e-49 | -8.615850e-47 |
| Msa0073480 | Msa0097600 | 0.832731 | 7.995023e-56 | -8.615850e-47 |
| Msa0073480 | Msa0100300 | 0.809395 | 1.933215e-50 | -8.615850e-47 |
| Msa0073480 | Msa0100740 | 0.822798 | 1.953480e-53 | -8.615850e-47 |
| Msa0073480 | Msa0121590 | 0.854188 | 1.453593e-61 | -8.615850e-47 |
| Msa0073480 | Msa0121820 | 0.801543 | 8.567316e-49 | -8.615850e-47 |
| Msa0073480 | Msa0127310 | 0.830597 | 2.684349e-55 | -8.615850e-47 |
| Msa0073480 | Msa0128860 | 0.838771 | 2.359545e-57 | -8.615850e-47 |
| Msa0073480 | Msa0129060 | 0.809637 | 1.715162e-50 | -8.615850e-47 |
| Msa0073480 | Msa0136070 | 0.808444 | 3.088045e-50 | -8.615850e-47 |
| Msa0073480 | Msa0136100 | 0.811345 | 7.333707e-51 | -8.615850e-47 |
| Msa0073480 | Msa0137550 | 0.828286 | 9.781189e-55 | -8.615850e-47 |
| Msa0073480 | Msa0137990 | 0.810781 | 9.716708e-51 | -8.615850e-47 |
| Msa0073480 | Msa0146340 | 0.826681 | 2.374077e-54 | -8.615850e-47 |
| Msa0073480 | Msa0150300 | 0.818222 | 2.193419e-52 | -8.615850e-47 |
| Msa0073480 | Msa0159170 | 0.812027 | 5.212234e-51 | -8.615850e-47 |
| Msa0073480 | Msa0160550 | 0.802503 | 5.439250e-49 | -8.615850e-47 |
| Msa0073480 | Msa0165950 | 0.842637 | 2.290355e-58 | -8.615850e-47 |
| Msa0073480 | Msa0167480 | 0.821321 | 4.297409e-53 | -8.615850e-47 |
| Msa0073480 | Msa0168720 | 0.801731 | 7.839640e-49 | -8.615850e-47 |
| Msa0073480 | Msa0169300 | 0.802940 | 4.419428e-49 | -8.615850e-47 |
| Msa0073480 | Msa0172970 | 0.820559 | 6.433377e-53 | -8.615850e-47 |
| Msa0073480 | Msa0173740 | 0.836095 | 1.143860e-56 | -8.615850e-47 |
| Msa0073480 | Msa0173820 | 0.833378 | 5.519557e-56 | -8.615850e-47 |
| Msa0073480 | Msa0173830 | 0.827656 | 1.387096e-54 | -8.615850e-47 |
| Msa0073480 | Msa0174730 | 0.837294 | 5.657379e-57 | -8.615850e-47 |
| Msa0073480 | Msa0182030 | 0.801859 | 7.381789e-49 | -8.615850e-47 |
| Msa0073480 | Msa0183900 | 0.820490 | 6.671702e-53 | -8.615850e-47 |
| Msa0073480 | Msa0186890 | 0.814238 | 1.706038e-51 | -8.615850e-47 |
| Msa0073480 | Msa0187690 | 0.834615 | 2.704935e-56 | -8.615850e-47 |
| Msa0073480 | Msa0187930 | 0.858970 | 5.714030e-63 | -8.615850e-47 |
| Msa0073480 | Msa0189300 | 0.842501 | 2.488961e-58 | -8.615850e-47 |
| Msa0073480 | Msa0191050 | 0.831434 | 1.672977e-55 | -8.615850e-47 |
| Msa0073480 | Msa0193120 | 0.817054 | 4.023929e-52 | -8.615850e-47 |
| Msa0073480 | Msa0194540 | 0.865112 | 7.479615e-65 | -8.615850e-47 |
| Msa0073480 | Msa0199690 | 0.843671 | 1.214319e-58 | -8.615850e-47 |
| Msa0073480 | Msa0211840 | 0.800783 | 1.225893e-48 | -8.615850e-47 |
| Msa0073480 | Msa0211860 | 0.807412 | 5.118033e-50 | -8.615850e-47 |
| Msa0073480 | Msa0214710 | 0.819540 | 1.100556e-52 | -8.615850e-47 |
| Msa0073480 | Msa0220720 | 0.824222 | 9.074277e-54 | -8.615850e-47 |
| Msa0073480 | Msa0225740 | 0.813210 | 2.872152e-51 | -8.615850e-47 |
| Msa0073480 | Msa0226470 | 0.816487 | 5.392277e-52 | -8.615850e-47 |
| Msa0073480 | Msa0227400 | 0.808614 | 2.840634e-50 | -8.615850e-47 |
| Msa0073480 | Msa0229170 | 0.812013 | 5.247983e-51 | -8.615850e-47 |
| Msa0073480 | Msa0231660 | 0.844690 | 6.465254e-59 | -8.615850e-47 |
| Msa0073480 | Msa0231880 | 0.812066 | 5.110682e-51 | -8.615850e-47 |
| Msa0073480 | Msa0233350 | 0.840201 | 1.002692e-57 | -8.615850e-47 |
| Msa0073480 | Msa0242230 | 0.807825 | 4.183227e-50 | -8.615850e-47 |
| Msa0073480 | Msa0242410 | 0.801266 | 9.765903e-49 | -8.615850e-47 |
| Msa0073480 | Msa0244780 | 0.856081 | 4.092677e-62 | -8.615850e-47 |
| Msa0073480 | Msa0260210 | 0.846646 | 1.906020e-59 | -8.615850e-47 |
| Msa0073480 | Msa0260240 | 0.818324 | 2.079829e-52 | -8.615850e-47 |
| Msa0073480 | Msa0260280 | 0.816751 | 4.704643e-52 | -8.615850e-47 |
| Msa0073480 | Msa0262310 | 0.849023 | 4.219410e-60 | -8.615850e-47 |
| Msa0073480 | Msa0264570 | 0.811022 | 8.617634e-51 | -8.615850e-47 |
| Msa0073480 | Msa0267970 | 0.864290 | 1.352874e-64 | -8.615850e-47 |
| Msa0073480 | Msa0268130 | 0.863051 | 3.280986e-64 | -8.615850e-47 |
| Msa0073480 | Msa0280430 | 0.821868 | 3.210704e-53 | -8.615850e-47 |
| Msa0073480 | Msa0280610 | 0.816114 | 6.533579e-52 | -8.615850e-47 |
| Msa0073480 | Msa0291520 | 0.837390 | 5.346964e-57 | -8.615850e-47 |
| Msa0073480 | Msa0298990 | 0.854050 | 1.593327e-61 | -8.615850e-47 |
| Msa0073480 | Msa0299870 | 0.803334 | 3.662856e-49 | -8.615850e-47 |
| Msa0073480 | Msa0300120 | 0.801347 | 9.399389e-49 | -8.615850e-47 |
| Msa0073480 | Msa0304260 | 0.811208 | 7.852029e-51 | -8.615850e-47 |
| Msa0073480 | Msa0304290 | 0.843995 | 9.943996e-59 | -8.615850e-47 |
| Msa0073480 | Msa0304330 | 0.849347 | 3.427233e-60 | -8.615850e-47 |
| Msa0073480 | Msa0304590 | 0.806210 | 9.189765e-50 | -8.615850e-47 |
| Msa0073480 | Msa0304660 | 0.803445 | 3.474152e-49 | -8.615850e-47 |
| Msa0073480 | Msa0305890 | 0.827798 | 1.282097e-54 | -8.615850e-47 |
| Msa0073480 | Msa0309750 | 0.833297 | 5.783033e-56 | -8.615850e-47 |
| Msa0073480 | Msa0309770 | 0.834600 | 2.728559e-56 | -8.615850e-47 |
| Msa0073480 | Msa0314720 | 0.809224 | 2.103599e-50 | -8.615850e-47 |
| Msa0073480 | Msa0327330 | 0.813074 | 3.077225e-51 | -8.615850e-47 |
| Msa0073480 | Msa0331700 | 0.803584 | 3.251809e-49 | -8.615850e-47 |
| Msa0073480 | Msa0337240 | 0.805285 | 1.437203e-49 | -8.615850e-47 |
| Msa0073480 | Msa0337650 | 0.833381 | 5.510456e-56 | -8.615850e-47 |
| Msa0073480 | Msa0340810 | 0.825910 | 3.622399e-54 | -8.615850e-47 |
| Msa0073480 | Msa0355270 | 0.814540 | 1.462851e-51 | -8.615850e-47 |
| Msa0073480 | Msa0359560 | 0.811473 | 6.879736e-51 | -8.615850e-47 |
| Msa0073480 | Msa0366890 | 0.848980 | 4.337525e-60 | -8.615850e-47 |
| Msa0073480 | Msa0369050 | 0.818554 | 1.845374e-52 | -8.615850e-47 |
| Msa0073480 | Msa0372660 | 0.803371 | 3.599309e-49 | -8.615850e-47 |
| Msa0073480 | Msa0372670 | 0.813873 | 2.053480e-51 | -8.615850e-47 |
| Msa0073480 | Msa0376300 | 0.814062 | 1.864961e-51 | -8.615850e-47 |
| Msa0073480 | Msa0376310 | 0.802776 | 4.777320e-49 | -8.615850e-47 |
| Msa0073480 | Msa0376690 | 0.858699 | 6.886502e-63 | -8.615850e-47 |
| Msa0073480 | Msa0385580 | 0.864387 | 1.261024e-64 | -8.615850e-47 |
| Msa0073480 | Msa0387730 | 0.810144 | 1.333761e-50 | -8.615850e-47 |
| Msa0073480 | Msa0402330 | 0.815363 | 9.604701e-52 | -8.615850e-47 |
| Msa0073480 | Msa0402650 | 0.831421 | 1.684961e-55 | -8.615850e-47 |
| Msa0073480 | Msa0414800 | 0.834840 | 2.375395e-56 | -8.615850e-47 |
| Msa0073480 | Msa0416400 | 0.809668 | 1.688647e-50 | -8.615850e-47 |
| Msa0073480 | Msa0419520 | 0.832001 | 1.212631e-55 | -8.615850e-47 |
| Msa0073480 | Msa0425220 | 0.831495 | 1.616616e-55 | -8.615850e-47 |
| Msa0073480 | Msa0429290 | 0.811818 | 5.788003e-51 | -8.615850e-47 |
| Msa0073480 | Msa0433640 | 0.809964 | 1.458661e-50 | -8.615850e-47 |
| Msa0073480 | Msa0447220 | 0.819929 | 8.972527e-53 | -8.615850e-47 |
| Msa0073480 | Msa0451570 | 0.802828 | 4.661421e-49 | -8.615850e-47 |
| Msa0073480 | Msa0458060 | 0.840862 | 6.731839e-58 | -8.615850e-47 |
| Msa0073480 | Msa0465550 | 0.843959 | 1.016281e-58 | -8.615850e-47 |
| Msa0073480 | Msa0465790 | 0.818274 | 2.134991e-52 | -8.615850e-47 |
| Msa0073480 | Msa0471440 | 0.821308 | 4.326668e-53 | -8.615850e-47 |
| Msa0073480 | Msa0471590 | 0.859583 | 3.741246e-63 | -8.615850e-47 |
| Msa0073480 | Msa0475580 | 0.805412 | 1.351479e-49 | -8.615850e-47 |
| Msa0073480 | Msa0481480 | 0.803354 | 3.627750e-49 | -8.615850e-47 |
| Msa0073480 | Msa0497490 | 0.835545 | 1.576891e-56 | -8.615850e-47 |
| Msa0073480 | Msa0508590 | 0.826991 | 2.002066e-54 | -8.615850e-47 |
| Msa0073480 | Msa0508630 | 0.839770 | 1.298564e-57 | -8.615850e-47 |
| Msa0073480 | Msa0509390 | 0.805272 | 1.446185e-49 | -8.615850e-47 |
| Msa0073480 | Msa0511490 | 0.833836 | 4.241821e-56 | -8.615850e-47 |
| Msa0073480 | Msa0521540 | 0.813093 | 3.046641e-51 | -8.615850e-47 |
| Msa0073480 | Msa0526540 | 0.850040 | 2.195404e-60 | -8.615850e-47 |
| Msa0073480 | Msa0529680 | 0.809370 | 1.956834e-50 | -8.615850e-47 |
| Msa0073480 | Msa0541860 | 0.815319 | 9.822953e-52 | -8.615850e-47 |
| Msa0073480 | Msa0547360 | 0.840722 | 7.325741e-58 | -8.615850e-47 |
| Msa0073480 | Msa0552810 | 0.814777 | 1.296321e-51 | -8.615850e-47 |
| Msa0073480 | Msa0553050 | 0.837635 | 4.628426e-57 | -8.615850e-47 |
| Msa0073480 | Msa0555450 | 0.815241 | 1.022449e-51 | -8.615850e-47 |
| Msa0073480 | Msa0568820 | 0.808590 | 2.873539e-50 | -8.615850e-47 |
| Msa0073480 | Msa0571920 | 0.833432 | 5.352711e-56 | -8.615850e-47 |
| Msa0073480 | Msa0576940 | 0.843869 | 1.074756e-58 | -8.615850e-47 |
| Msa0073480 | Msa0589190 | 0.819256 | 1.277787e-52 | -8.615850e-47 |
| Msa0073480 | Msa0601290 | 0.805958 | 1.038275e-49 | -8.615850e-47 |
| Msa0073480 | Msa0607050 | 0.807110 | 5.931655e-50 | -8.615850e-47 |
| Msa0073480 | Msa0610390 | 0.813050 | 3.113581e-51 | -8.615850e-47 |
| Msa0073480 | Msa0612390 | 0.810256 | 1.261571e-50 | -8.615850e-47 |
| Msa0073480 | Msa0615440 | 0.833520 | 5.088373e-56 | -8.615850e-47 |
| Msa0073480 | Msa0618510 | 0.801291 | 9.648668e-49 | -8.615850e-47 |
| Msa0073480 | Msa0619070 | 0.829057 | 6.368786e-55 | -8.615850e-47 |
| Msa0073480 | Msa0620890 | 0.804007 | 2.656103e-49 | -8.615850e-47 |
| Msa0073480 | Msa0623700 | 0.809633 | 1.718372e-50 | -8.615850e-47 |
| Msa0073480 | Msa0625680 | 0.803657 | 3.140056e-49 | -8.615850e-47 |
| Msa0073480 | Msa0631350 | 0.810752 | 9.857925e-51 | -8.615850e-47 |
| Msa0073480 | Msa0643220 | 0.829522 | 4.910999e-55 | -8.615850e-47 |
| Msa0073480 | Msa0643560 | 0.804484 | 2.112538e-49 | -8.615850e-47 |
| Msa0073480 | Msa0647500 | 0.838966 | 2.100644e-57 | -8.615850e-47 |
| Msa0073480 | Msa0650920 | 0.825132 | 5.536232e-54 | -8.615850e-47 |
| Msa0073480 | Msa0661300 | 0.812442 | 4.231647e-51 | -8.615850e-47 |
| Msa0073480 | Msa0666230 | 0.808028 | 3.786707e-50 | -8.615850e-47 |
| Msa0073480 | Msa0677290 | 0.801137 | 1.037870e-48 | -8.615850e-47 |
| Msa0073480 | Msa0680240 | 0.801002 | 1.105845e-48 | -8.615850e-47 |
| Msa0073480 | Msa0682900 | 0.847763 | 9.411356e-60 | -8.615850e-47 |
| Msa0073480 | Msa0687630 | 0.823559 | 1.297949e-53 | -8.615850e-47 |
| Msa0073480 | Msa0690150 | 0.836259 | 1.039441e-56 | -8.615850e-47 |
| Msa0073480 | Msa0691900 | 0.844231 | 8.590769e-59 | -8.615850e-47 |
| Msa0073480 | Msa0692940 | 0.841270 | 5.259590e-58 | -8.615850e-47 |
| Msa0073480 | Msa0694840 | 0.804251 | 2.362690e-49 | -8.615850e-47 |
| Msa0073480 | Msa0698060 | 0.837905 | 3.943765e-57 | -8.615850e-47 |
| Msa0073480 | Msa0698490 | 0.836321 | 1.002276e-56 | -8.615850e-47 |
| Msa0073480 | Msa0698660 | 0.841404 | 4.850878e-58 | -8.615850e-47 |
| Msa0073480 | Msa0703230 | 0.813196 | 2.893305e-51 | -8.615850e-47 |
| Msa0073480 | Msa0708520 | 0.803481 | 3.414557e-49 | -8.615850e-47 |
| Msa0073480 | Msa0708610 | 0.801632 | 8.215678e-49 | -8.615850e-47 |
| Msa0073480 | Msa0709500 | 0.840812 | 6.939232e-58 | -8.615850e-47 |
| Msa0073480 | Msa0711780 | 0.822075 | 2.875778e-53 | -8.615850e-47 |
| Msa0073480 | Msa0715650 | 0.837734 | 4.364130e-57 | -8.615850e-47 |
| Msa0073480 | Msa0718740 | 0.827732 | 1.329570e-54 | -8.615850e-47 |
| Msa0073480 | Msa0719420 | 0.821150 | 4.704372e-53 | -8.615850e-47 |
| Msa0073480 | Msa0746420 | 0.801436 | 9.011192e-49 | -8.615850e-47 |
| Msa0073480 | Msa0750430 | 0.813925 | 1.999497e-51 | -8.615850e-47 |
| Msa0073480 | Msa0750880 | 0.836507 | 8.985868e-57 | -8.615850e-47 |
| Msa0073480 | Msa0750920 | 0.836173 | 1.092543e-56 | -8.615850e-47 |
| Msa0073480 | Msa0770200 | 0.837106 | 6.321536e-57 | -8.615850e-47 |
| Msa0073480 | Msa0772480 | 0.862147 | 6.226789e-64 | -8.615850e-47 |
| Msa0073480 | Msa0788850 | 0.814862 | 1.240953e-51 | -8.615850e-47 |
| Msa0073480 | Msa0789680 | 0.824738 | 6.858153e-54 | -8.615850e-47 |
| Msa0073480 | Msa0790850 | 0.841787 | 3.844595e-58 | -8.615850e-47 |
| Msa0073480 | Msa0794670 | 0.855003 | 8.444944e-62 | -8.615850e-47 |
| Msa0073480 | Msa0796530 | 0.821216 | 4.543921e-53 | -8.615850e-47 |
| Msa0073480 | Msa0798440 | 0.882755 | 7.982060e-71 | -8.615850e-47 |
| Msa0073480 | Msa0802410 | 0.825584 | 4.329469e-54 | -8.615850e-47 |
| Msa0073480 | Msa0806920 | 0.823549 | 1.305013e-53 | -8.615850e-47 |
| Msa0073480 | Msa0808270 | 0.836925 | 7.032415e-57 | -8.615850e-47 |
| Msa0073480 | Msa0813720 | 0.810300 | 1.234172e-50 | -8.615850e-47 |
| Msa0073480 | Msa0819060 | 0.816389 | 5.672111e-52 | -8.615850e-47 |
| Msa0073480 | Msa0830540 | 0.840427 | 8.755076e-58 | -8.615850e-47 |
| Msa0073480 | Msa0831870 | 0.822783 | 1.969372e-53 | -8.615850e-47 |
| Msa0073480 | Msa0836660 | -0.800943 | 1.137077e-48 | -8.615850e-47 |
| Msa0073480 | Msa0842830 | 0.837975 | 3.785195e-57 | -8.615850e-47 |
| Msa0073480 | Msa0876200 | 0.821013 | 5.059391e-53 | -8.615850e-47 |
| Msa0073480 | Msa0902760 | 0.844145 | 9.060549e-59 | -8.615850e-47 |
| Msa0073480 | Msa0926850 | 0.817691 | 2.892410e-52 | -8.615850e-47 |
| Msa0073480 | Msa0933290 | 0.822887 | 1.862387e-53 | -8.615850e-47 |
| Msa0073480 | Msa0944190 | 0.805584 | 1.243979e-49 | -8.615850e-47 |
| Msa0073480 | Msa0968590 | 0.834296 | 3.254369e-56 | -8.615850e-47 |
| Msa0073480 | Msa0970030 | 0.829208 | 5.853040e-55 | -8.615850e-47 |
| Msa0073480 | Msa0989540 | 0.816622 | 5.030198e-52 | -8.615850e-47 |
| Msa0073480 | Msa1006840 | 0.850968 | 1.204434e-60 | -8.615850e-47 |
| Msa0073480 | Msa1013400 | 0.850391 | 1.750458e-60 | -8.615850e-47 |
| Msa0073480 | Msa1014420 | 0.819980 | 8.732360e-53 | -8.615850e-47 |
| Msa0073480 | Msa1017630 | 0.806697 | 7.252014e-50 | -8.615850e-47 |
| Msa0073480 | Msa1019240 | 0.848632 | 5.416077e-60 | -8.615850e-47 |
| Msa0073480 | Msa1019260 | 0.839539 | 1.491909e-57 | -8.615850e-47 |
| Msa0073480 | Msa1040890 | 0.800036 | 1.740091e-48 | -8.615850e-47 |
| Msa0073480 | Msa1043690 | 0.826725 | 2.317250e-54 | -8.615850e-47 |
| Msa0073480 | Msa1046020 | 0.819641 | 1.044190e-52 | -8.615850e-47 |
| Msa0073480 | Msa1050210 | 0.846338 | 2.313085e-59 | -8.615850e-47 |
| Msa0073480 | Msa1051200 | 0.801425 | 9.059476e-49 | -8.615850e-47 |
| Msa0073480 | Msa1051880 | 0.803819 | 2.905642e-49 | -8.615850e-47 |
| Msa0073480 | Msa1081150 | 0.854097 | 1.544617e-61 | -8.615850e-47 |
| Msa0073480 | Msa1084470 | 0.844050 | 9.607949e-59 | -8.615850e-47 |
| Msa0073480 | Msa1089840 | 0.803124 | 4.048998e-49 | -8.615850e-47 |
| Msa0073480 | Msa1091100 | 0.801051 | 1.080574e-48 | -8.615850e-47 |
| Msa0073480 | Msa1091530 | 0.804405 | 2.194794e-49 | -8.615850e-47 |
| Msa0073480 | Msa1093530 | 0.842708 | 2.192147e-58 | -8.615850e-47 |
| Msa0073480 | Msa1104140 | 0.878169 | 3.490684e-69 | -8.615850e-47 |
| Msa0073480 | Msa1104210 | 0.841146 | 5.671971e-58 | -8.615850e-47 |
| Msa0073480 | Msa1108820 | 0.805804 | 1.118408e-49 | -8.615850e-47 |
| Msa0073480 | Msa1121440 | 0.800021 | 1.752235e-48 | -8.615850e-47 |
| Msa0073480 | Msa1125760 | 0.811822 | 5.777738e-51 | -8.615850e-47 |
| Msa0073480 | Msa1126510 | 0.843461 | 1.381168e-58 | -8.615850e-47 |
| Msa0073480 | Msa1126770 | 0.822021 | 2.959689e-53 | -8.615850e-47 |
| Msa0073480 | Msa1127890 | 0.821940 | 3.089972e-53 | -8.615850e-47 |
| Msa0073480 | Msa1134090 | 0.807706 | 4.434285e-50 | -8.615850e-47 |
| Msa0073480 | Msa1137700 | 0.804447 | 2.150778e-49 | -8.615850e-47 |
| Msa0073480 | Msa1138870 | 0.832593 | 8.652407e-56 | -8.615850e-47 |
| Msa0073480 | Msa1165870 | 0.819188 | 1.323825e-52 | -8.615850e-47 |
| Msa0073480 | Msa1165940 | 0.815933 | 7.172454e-52 | -8.615850e-47 |
| Msa0073480 | Msa1166330 | 0.819515 | 1.115633e-52 | -8.615850e-47 |
| Msa0073480 | Msa1166340 | 0.819418 | 1.173916e-52 | -8.615850e-47 |
| Msa0073480 | Msa1166410 | 0.802976 | 4.343791e-49 | -8.615850e-47 |
| Msa0073480 | Msa1166860 | 0.853786 | 1.897432e-61 | -8.615850e-47 |
| Msa0073480 | Msa1166870 | 0.829394 | 5.277210e-55 | -8.615850e-47 |
| Msa0073480 | Msa1171360 | 0.838429 | 2.890726e-57 | -8.615850e-47 |
| Msa0073480 | Msa1179950 | 0.841939 | 3.504012e-58 | -8.615850e-47 |
| Msa0073480 | Msa1179980 | 0.831007 | 2.129949e-55 | -8.615850e-47 |
| Msa0073480 | Msa1181850 | 0.810980 | 8.798152e-51 | -8.615850e-47 |
| Msa0073480 | Msa1181860 | 0.807847 | 4.138508e-50 | -8.615850e-47 |
| Msa0073480 | Msa1187840 | 0.816972 | 4.198369e-52 | -8.615850e-47 |
| Msa0073480 | Msa1206670 | 0.800730 | 1.256747e-48 | -8.615850e-47 |
| Msa0073480 | Msa1207270 | 0.852662 | 3.985519e-61 | -8.615850e-47 |
| Msa0073480 | Msa1209760 | 0.813557 | 2.410163e-51 | -8.615850e-47 |
| Msa0073480 | Msa1211890 | 0.801961 | 7.031107e-49 | -8.615850e-47 |
| Msa0073480 | Msa1218600 | 0.846276 | 2.405155e-59 | -8.615850e-47 |
| Msa0073480 | Msa1227690 | 0.800519 | 1.387203e-48 | -8.615850e-47 |
| Msa0073480 | Msa1237940 | 0.828514 | 8.619853e-55 | -8.615850e-47 |
| Msa0073480 | Msa1254710 | 0.817319 | 3.506887e-52 | -8.615850e-47 |
| Msa0073480 | Msa1255040 | -0.854928 | 8.876647e-62 | -8.615850e-47 |
| Msa0073480 | Msa1257510 | 0.850477 | 1.655877e-60 | -8.615850e-47 |
| Msa0073480 | Msa1265630 | 0.839641 | 1.403379e-57 | -8.615850e-47 |
| Msa0073480 | Msa1269300 | 0.807873 | 4.085261e-50 | -8.615850e-47 |
| Msa0073480 | Msa1270620 | 0.816925 | 4.300574e-52 | -8.615850e-47 |
| Msa0073480 | Msa1270690 | 0.824790 | 6.667286e-54 | -8.615850e-47 |
| Msa0073480 | Msa1281190 | 0.808776 | 2.622256e-50 | -8.615850e-47 |
| Msa0073480 | Msa1292830 | 0.805279 | 1.441373e-49 | -8.615850e-47 |
| Msa0073480 | Msa1295110 | 0.805194 | 1.501499e-49 | -8.615850e-47 |
| Msa0073480 | Msa1295490 | -0.834469 | 2.943356e-56 | -8.615850e-47 |
| Msa0073480 | Msa1304820 | 0.826416 | 2.745131e-54 | -8.615850e-47 |
| Msa0073480 | Msa1306990 | 0.826670 | 2.388910e-54 | -8.615850e-47 |
| Msa0073480 | Msa1307950 | 0.812988 | 3.213204e-51 | -8.615850e-47 |
| Msa0073480 | Msa1316780 | 0.831411 | 1.694963e-55 | -8.615850e-47 |
| Msa0073480 | Msa1316830 | 0.836819 | 7.481792e-57 | -8.615850e-47 |
| Msa0073480 | Msa1335940 | 0.825576 | 4.346455e-54 | -8.615850e-47 |
| Msa0073480 | Msa1353060 | 0.836854 | 7.332907e-57 | -8.615850e-47 |
| Msa0073480 | Msa1355700 | 0.819172 | 1.335235e-52 | -8.615850e-47 |
| Msa0073480 | Msa1356440 | 0.830748 | 2.466558e-55 | -8.615850e-47 |
| Msa0073480 | Msa1358250 | 0.800467 | 1.422063e-48 | -8.615850e-47 |
| Msa0073480 | Msa1359390 | 0.813399 | 2.611032e-51 | -8.615850e-47 |
| Msa0073480 | Msa1361100 | 0.812437 | 4.242331e-51 | -8.615850e-47 |
| Msa0073480 | Msa1363330 | 0.851635 | 7.808008e-61 | -8.615850e-47 |
| Msa0073480 | Msa1370860 | 0.802404 | 5.702529e-49 | -8.615850e-47 |
| Msa0073480 | Msa1374120 | 0.851643 | 7.763242e-61 | -8.615850e-47 |
| Msa0073480 | Msa1379760 | 0.843871 | 1.073087e-58 | -8.615850e-47 |
| Msa0073480 | Msa1385670 | 0.809230 | 2.097040e-50 | -8.615850e-47 |
| Msa0073480 | Msa1386600 | 0.852597 | 4.159475e-61 | -8.615850e-47 |
| Msa0073480 | Msa1386780 | 0.823260 | 1.524149e-53 | -8.615850e-47 |
| Msa0073480 | Msa1389510 | 0.802363 | 5.812586e-49 | -8.615850e-47 |
| Msa0073480 | Msa1391410 | 0.830809 | 2.381968e-55 | -8.615850e-47 |
| Msa0073480 | Msa1394290 | 0.859950 | 2.900385e-63 | -8.615850e-47 |
| Msa0073480 | Msa1397810 | 0.816123 | 6.504354e-52 | -8.615850e-47 |
| Msa0073480 | Msa1403680 | 0.814771 | 1.299983e-51 | -8.615850e-47 |
| Msa0073480 | Msa1404010 | 0.802026 | 6.821214e-49 | -8.615850e-47 |
| Msa0073480 | Msa1404190 | 0.824284 | 8.772851e-54 | -8.615850e-47 |
| Msa0073480 | Msa1407460 | 0.852168 | 5.508315e-61 | -8.615850e-47 |
| Msa0073480 | Msa1432420 | 0.806171 | 9.364235e-50 | -8.615850e-47 |
| Msa0073480 | Msa1432700 | 0.830698 | 2.535781e-55 | -8.615850e-47 |
| Msa0073480 | Msa1435370 | 0.810204 | 1.294980e-50 | -8.615850e-47 |
| Msa0073480 | Msa1440910 | 0.800584 | 1.345846e-48 | -8.615850e-47 |
| Msa0073480 | Msa1442850 | 0.814164 | 1.771074e-51 | -8.615850e-47 |
| Msa0073480 | Msa1444310 | 0.830854 | 2.323165e-55 | -8.615850e-47 |
| Msa0073480 | Msa1448690 | 0.851334 | 9.494705e-61 | -8.615850e-47 |
| Msa0073480 | Msa1450280 | 0.813687 | 2.256191e-51 | -8.615850e-47 |
| Msa0073480 | Msa1457920 | 0.866104 | 3.637215e-65 | -8.615850e-47 |
| Msa0073480 | Msa1461280 | 0.816424 | 5.571148e-52 | -8.615850e-47 |
| Msa0073480 | Msa1465080 | 0.819435 | 1.163100e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073480 | MtrunA17_Chr1g0180621 | 100.000 | 119 | 0 | 0 | 1 | 119 | 1 | 119 | 2.31e-85 | 244 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0073480 | AT2G36930.1 | 77.586 | 116 | 26 | 0 | 3 | 118 | 2 | 117 | 1.16e-63 | 192 |
| Msa0073480 | AT2G36930.1 | 61.364 | 88 | 26 | 1 | 31 | 118 | 118 | 197 | 4.92e-23 | 89.0 |
Find 43 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAGCCACTGTACTGATTT+AGG | 0.203717 | 1_2:-47162405 | None:intergenic |
| GCAGCCACTGTACTGATTTA+GGG | 0.258130 | 1_2:-47162404 | None:intergenic |
| ATTAACTTTGGTCCATTATC+TGG | 0.259509 | 1_2:-47165333 | None:intergenic |
| CCTAAGAAATCAGATCAAAA+TGG | 0.284489 | 1_2:+47162476 | Msa0073480:exon |
| TGATCTGATTTCTTAGGGTT+AGG | 0.300976 | 1_2:-47162470 | None:intergenic |
| AGAGAAGATATAGATTATAT+TGG | 0.308792 | 1_2:-47165474 | None:intergenic |
| CAATAGTGCTGTCCCATTCC+AGG | 0.370992 | 1_2:-47162654 | None:intergenic |
| GATCTGATTTCTTAGGGTTA+GGG | 0.371471 | 1_2:-47162469 | None:intergenic |
| ATATTGCTTATCTCGTAATA+AGG | 0.388431 | 1_2:-47165433 | None:intergenic |
| CCTCTTGATGAAGATTTGCC+TGG | 0.392427 | 1_2:+47162636 | Msa0073480:CDS |
| GGGATGGGAATGCCAGATAA+TGG | 0.398576 | 1_2:+47165321 | Msa0073480:CDS |
| TGATGAAGATTTGCCTGGAA+TGG | 0.414705 | 1_2:+47162641 | Msa0073480:CDS |
| TGAGAGATTATAGTAGAAAC+TGG | 0.420409 | 1_2:+47165385 | Msa0073480:three_prime_UTR |
| CAACTTGATGCTGATTTAGC+TGG | 0.435360 | 1_2:+47165297 | Msa0073480:CDS |
| CTAAGAAATCAGATCAAAAT+GGG | 0.462676 | 1_2:+47162477 | Msa0073480:exon |
| GGCTGCAGAAGAAGAGTAAG+AGG | 0.467117 | 1_2:+47162421 | Msa0073480:five_prime_UTR |
| GATGAAGATTTGCCTGGAAT+GGG | 0.472700 | 1_2:+47162642 | Msa0073480:CDS |
| AGTTACATAGACATTAACTT+TGG | 0.499727 | 1_2:-47165345 | None:intergenic |
| CTCTTCTTCACCTTCCTGTG+TGG | 0.501586 | 1_2:-47162510 | None:intergenic |
| CTTGATCAAAGGAGATGACA+TGG | 0.505141 | 1_2:+47162569 | Msa0073480:CDS |
| GATCTAAGAGGTAAATTAGG+AGG | 0.506513 | 1_2:-47165503 | None:intergenic |
| CGTTCAAAATTCTTGATCAA+AGG | 0.507305 | 1_2:+47162558 | Msa0073480:CDS |
| AAATCTTCATCAAGAGGTAA+AGG | 0.519690 | 1_2:-47162630 | None:intergenic |
| AAAGGCTTTCTATCTTCTTG+AGG | 0.536393 | 1_2:-47162612 | None:intergenic |
| CTCGTCCCTCACGGCTACAC+TGG | 0.536997 | 1_2:-47163462 | None:intergenic |
| CTTAAAATGCTCGTCCCTCA+CGG | 0.540545 | 1_2:-47163471 | None:intergenic |
| GCTGATTTAGCTGGAGGGAT+GGG | 0.562217 | 1_2:+47165306 | Msa0073480:CDS |
| AGGAAAATGTCCACACAGGA+AGG | 0.564358 | 1_2:+47162500 | Msa0073480:CDS |
| CTTTGCCAGTGTAGCCGTGA+GGG | 0.568259 | 1_2:+47163457 | Msa0073480:CDS |
| CTTGATGCTGATTTAGCTGG+AGG | 0.571593 | 1_2:+47165300 | Msa0073480:CDS |
| TGCTGATTTAGCTGGAGGGA+TGG | 0.572336 | 1_2:+47165305 | Msa0073480:CDS |
| TAGAGATATACTCGCAGTGA+AGG | 0.577943 | 1_2:-47162677 | None:intergenic |
| CCAGGCAAATCTTCATCAAG+AGG | 0.587128 | 1_2:-47162636 | None:intergenic |
| ATCTAAGAGGTAAATTAGGA+GGG | 0.589139 | 1_2:-47165502 | None:intergenic |
| GTGCAGTGTGAAACAAATGA+TGG | 0.596101 | 1_2:+47165257 | Msa0073480:intron |
| TGCAGTGTGAAACAAATGAT+GGG | 0.638754 | 1_2:+47165258 | Msa0073480:intron |
| TCTTTGCCAGTGTAGCCGTG+AGG | 0.645497 | 1_2:+47163456 | Msa0073480:CDS |
| AGAGGAAGAAACCAAACGAG+AGG | 0.655498 | 1_2:+47162439 | Msa0073480:five_prime_UTR |
| TTGATGCTGATTTAGCTGGA+GGG | 0.659691 | 1_2:+47165301 | Msa0073480:CDS |
| AGAAATCAGATCAAAATGGG+AGG | 0.672358 | 1_2:+47162480 | Msa0073480:exon |
| TGGGAGGAAAATGTCCACAC+AGG | 0.692313 | 1_2:+47162496 | Msa0073480:CDS |
| TCAGCATCAAGTTGAGTGTG+TGG | 0.703337 | 1_2:-47165288 | None:intergenic |
| AAAACCCTAAATCAGTACAG+TGG | 0.719032 | 1_2:+47162400 | Msa0073480:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGTTTTATTATTATTCTTA+TGG | + | chr1_2:47163311-47163330 | Msa0073480:intron | 10.0% |
| !!! | TGATAATAATTGATTTTGAA+TGG | + | chr1_2:47162766-47162785 | Msa0073480:intron | 15.0% |
| !! | TGATTATGTAAAATTGATTA+TGG | + | chr1_2:47162791-47162810 | Msa0073480:intron | 15.0% |
| !! | AATTGAAAATTGATTATGTT+TGG | + | chr1_2:47162828-47162847 | Msa0073480:intron | 15.0% |
| !! | TATTCACTAATATAAAAACA+GGG | - | chr1_2:47163574-47163593 | None:intergenic | 15.0% |
| !! | ATATTCACTAATATAAAAAC+AGG | - | chr1_2:47163575-47163594 | None:intergenic | 15.0% |
| !!! | ATTGACTTATTTAAACTTTT+GGG | - | chr1_2:47163787-47163806 | None:intergenic | 15.0% |
| !!! | AATTGACTTATTTAAACTTT+TGG | - | chr1_2:47163788-47163807 | None:intergenic | 15.0% |
| !!! | TGAAATTTTTAGAATTATTC+TGG | + | chr1_2:47164052-47164071 | Msa0073480:intron | 15.0% |
| !!! | TGAAATAATTTAGTTTTTTG+TGG | + | chr1_2:47164472-47164491 | Msa0073480:intron | 15.0% |
| !!! | GAAATAATTTAGTTTTTTGT+GGG | + | chr1_2:47164473-47164492 | Msa0073480:intron | 15.0% |
| !!! | AAATAATTTAGTTTTTTGTG+GGG | + | chr1_2:47164474-47164493 | Msa0073480:intron | 15.0% |
| !!! | TTTTAGAGAATTCTAAATTA+TGG | + | chr1_2:47164606-47164625 | Msa0073480:intron | 15.0% |
| !! | TTTAGAGAATTCTAAATTAT+GGG | + | chr1_2:47164607-47164626 | Msa0073480:intron | 15.0% |
| !!! | ATTTTGAGTTGAAATGATTT+GGG | + | chr1_2:47163049-47163068 | Msa0073480:intron | 20.0% |
| !!! | AGAATTGATTAGAACATTTT+TGG | - | chr1_2:47163189-47163208 | None:intergenic | 20.0% |
| !!! | ATTTTAAGACAAAAAAACAC+AGG | + | chr1_2:47163486-47163505 | Msa0073480:CDS | 20.0% |
| !! | AACTATTAGAAAAGATTTAG+AGG | + | chr1_2:47164290-47164309 | Msa0073480:intron | 20.0% |
| !! | TATATATTACTTAGCAAATG+CGG | - | chr1_2:47164584-47164603 | None:intergenic | 20.0% |
| !! | TTAGAGAATTCTAAATTATG+GGG | + | chr1_2:47164608-47164627 | Msa0073480:intron | 20.0% |
| !!! | GCTGAAATTGAATTATTTTT+CGG | + | chr1_2:47164979-47164998 | Msa0073480:intron | 20.0% |
| !! | AAATAAACAGTAATATCAGA+AGG | - | chr1_2:47165237-47165256 | None:intergenic | 20.0% |
| !! | AGAGAAGATATAGATTATAT+TGG | - | chr1_2:47165477-47165496 | None:intergenic | 20.0% |
| !!! | CATTTTGATCTGATTTCTTA+GGG | - | chr1_2:47162478-47162497 | None:intergenic | 25.0% |
| ! | CTAAGAAATCAGATCAAAAT+GGG | + | chr1_2:47162477-47162496 | Msa0073480:exon | 25.0% |
| ! | TTGATTATGTTTGGATTCAT+TGG | + | chr1_2:47162837-47162856 | Msa0073480:intron | 25.0% |
| ! | TGATTATGTTTGGATTCATT+GGG | + | chr1_2:47162838-47162857 | Msa0073480:intron | 25.0% |
| !!! | GATTTTGAGTTGAAATGATT+TGG | + | chr1_2:47163048-47163067 | Msa0073480:intron | 25.0% |
| !!! | ACACCTCTAAAATCAATTTT+TGG | + | chr1_2:47163209-47163228 | Msa0073480:intron | 25.0% |
| ! | TTACATACAAAGTGTATGTT+TGG | - | chr1_2:47163252-47163271 | None:intergenic | 25.0% |
| ! | ATTCTTATGGTTAAGACTTA+AGG | + | chr1_2:47163324-47163343 | Msa0073480:intron | 25.0% |
| !! | TGTTTTTCGTTCTTATGTTT+TGG | + | chr1_2:47163384-47163403 | Msa0073480:intron | 25.0% |
| ! | AACATATCTTTCTTTCAGAT+AGG | + | chr1_2:47163666-47163685 | Msa0073480:intron | 25.0% |
| ! | ACATATCTTTCTTTCAGATA+GGG | + | chr1_2:47163667-47163686 | Msa0073480:intron | 25.0% |
| ! | ATAAGTCAATTAACCATAAC+TGG | + | chr1_2:47163797-47163816 | Msa0073480:intron | 25.0% |
| ! | AACATAGACAAGGTATATAT+AGG | - | chr1_2:47163917-47163936 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | - | chr1_2:47164273-47164292 | None:intergenic | 25.0% |
| ! | TAATGAGTTTGATCCAAATA+TGG | + | chr1_2:47164314-47164333 | Msa0073480:intron | 25.0% |
| ! | GTTCTATCATAATCCATATT+TGG | - | chr1_2:47164330-47164349 | None:intergenic | 25.0% |
| !! | TGGATTATGATAGAACATTT+TGG | + | chr1_2:47164334-47164353 | Msa0073480:intron | 25.0% |
| ! | AACATAAAACTACATACAGT+GGG | - | chr1_2:47164745-47164764 | None:intergenic | 25.0% |
| !! | GTTTTATGTTGTTCAGTAAT+TGG | + | chr1_2:47164755-47164774 | Msa0073480:intron | 25.0% |
| !! | TGGATTTATACATGTTTTCA+AGG | + | chr1_2:47164775-47164794 | Msa0073480:intron | 25.0% |
| !! | TTTGCGCATATATATTGTTT+TGG | + | chr1_2:47164859-47164878 | Msa0073480:intron | 25.0% |
| ! | TAAGTGCATTATGATGTAAT+AGG | + | chr1_2:47165067-47165086 | Msa0073480:intron | 25.0% |
| !! | AGAGTATAGCTTTTCATTAA+AGG | + | chr1_2:47165163-47165182 | Msa0073480:intron | 25.0% |
| ! | AGTTACATAGACATTAACTT+TGG | - | chr1_2:47165348-47165367 | None:intergenic | 25.0% |
| ! | ATATTGCTTATCTCGTAATA+AGG | - | chr1_2:47165436-47165455 | None:intergenic | 25.0% |
| !! | CCATTTTGATCTGATTTCTT+AGG | - | chr1_2:47162479-47162498 | None:intergenic | 30.0% |
| CCTAAGAAATCAGATCAAAA+TGG | + | chr1_2:47162476-47162495 | Msa0073480:exon | 30.0% | |
| CGTTCAAAATTCTTGATCAA+AGG | + | chr1_2:47162558-47162577 | Msa0073480:CDS | 30.0% | |
| AAATCTTCATCAAGAGGTAA+AGG | - | chr1_2:47162633-47162652 | None:intergenic | 30.0% | |
| GTTTGCAAAATTTGTGTGTT+TGG | + | chr1_2:47162735-47162754 | Msa0073480:intron | 30.0% | |
| !!! | AATTTGTGTGTTTGGTTTTG+CGG | + | chr1_2:47162743-47162762 | Msa0073480:intron | 30.0% |
| CGAAACTAATGATTTAGTGT+AGG | + | chr1_2:47162922-47162941 | Msa0073480:intron | 30.0% | |
| AACTAATGATTTAGTGTAGG+AGG | + | chr1_2:47162925-47162944 | Msa0073480:intron | 30.0% | |
| TGTATGTGTATGTGTATGTT+TGG | + | chr1_2:47163006-47163025 | Msa0073480:intron | 30.0% | |
| AATTGATACTACTTGAAGCT+AGG | - | chr1_2:47163149-47163168 | None:intergenic | 30.0% | |
| ! | CAATTTTGCCTCTTAAAATG+TGG | + | chr1_2:47163273-47163292 | Msa0073480:intron | 30.0% |
| CGAAAAACAAAAAACGAGTT+GGG | - | chr1_2:47163373-47163392 | None:intergenic | 30.0% | |
| ACGAAAAACAAAAAACGAGT+TGG | - | chr1_2:47163374-47163393 | None:intergenic | 30.0% | |
| !!! | TTTCGTTCTTATGTTTTGGT+TGG | + | chr1_2:47163388-47163407 | Msa0073480:intron | 30.0% |
| GAATGTTCGATAAGATTGAA+AGG | - | chr1_2:47163550-47163569 | None:intergenic | 30.0% | |
| GTGAATATGCTTTATAGTTG+AGG | + | chr1_2:47163587-47163606 | Msa0073480:intron | 30.0% | |
| AGAAGAAAACACTTCAAAAC+AGG | - | chr1_2:47163618-47163637 | None:intergenic | 30.0% | |
| ACAAAATTCAGCTTGATTGA+AGG | - | chr1_2:47163744-47163763 | None:intergenic | 30.0% | |
| ! | CTGAATTTTGTCCTTAATCT+AGG | + | chr1_2:47163753-47163772 | Msa0073480:intron | 30.0% |
| ! | GGACAAGCATATTTTACAAA+GGG | - | chr1_2:47163962-47163981 | None:intergenic | 30.0% |
| !! | ATTATTCTGGAATGTTGTGT+TGG | + | chr1_2:47164065-47164084 | Msa0073480:intron | 30.0% |
| ! | GTAGTATGAAGAGTATATGT+CGG | + | chr1_2:47164226-47164245 | Msa0073480:intron | 30.0% |
| AGCATTCAAAATTGTGTGTT+AGG | + | chr1_2:47164659-47164678 | Msa0073480:intron | 30.0% | |
| TACCAAGTAATTAACATGCA+TGG | - | chr1_2:47164714-47164733 | None:intergenic | 30.0% | |
| CAACATAAAACTACATACAG+TGG | - | chr1_2:47164746-47164765 | None:intergenic | 30.0% | |
| CAAGTGAAGATACTAGAAAT+TGG | - | chr1_2:47164815-47164834 | None:intergenic | 30.0% | |
| CTTCACTTGAAATCTTAACT+TGG | + | chr1_2:47164826-47164845 | Msa0073480:intron | 30.0% | |
| AAACATAGAGTTTGCAAGAA+TGG | - | chr1_2:47164897-47164916 | None:intergenic | 30.0% | |
| ATGAGGTGGTTAAAATTGAT+TGG | - | chr1_2:47165029-47165048 | None:intergenic | 30.0% | |
| !! | ATTTAGTTTGCACTATGATG+AGG | - | chr1_2:47165046-47165065 | None:intergenic | 30.0% |
| ATTAACTTTGGTCCATTATC+TGG | - | chr1_2:47165336-47165355 | None:intergenic | 30.0% | |
| !! | TGTAACTTTCTTTTTCGTAG+TGG | + | chr1_2:47165361-47165380 | Msa0073480:exon | 30.0% |
| TGAGAGATTATAGTAGAAAC+TGG | + | chr1_2:47165385-47165404 | Msa0073480:three_prime_UTR | 30.0% | |
| AAAACCCTAAATCAGTACAG+TGG | + | chr1_2:47162400-47162419 | Msa0073480:five_prime_UTR | 35.0% | |
| GATCTGATTTCTTAGGGTTA+GGG | - | chr1_2:47162472-47162491 | None:intergenic | 35.0% | |
| TGATCTGATTTCTTAGGGTT+AGG | - | chr1_2:47162473-47162492 | None:intergenic | 35.0% | |
| AGAAATCAGATCAAAATGGG+AGG | + | chr1_2:47162480-47162499 | Msa0073480:exon | 35.0% | |
| AAAGGCTTTCTATCTTCTTG+AGG | - | chr1_2:47162615-47162634 | None:intergenic | 35.0% | |
| !! | GGGCCAAAAATTGATTTTAG+AGG | - | chr1_2:47163215-47163234 | None:intergenic | 35.0% |
| ! | TGTTTGGTTCCATTTGTAGA+GGG | - | chr1_2:47163236-47163255 | None:intergenic | 35.0% |
| ! | ATGTTTGGTTCCATTTGTAG+AGG | - | chr1_2:47163237-47163256 | None:intergenic | 35.0% |
| ! | GTTTCGTTCCACATTTTAAG+AGG | - | chr1_2:47163284-47163303 | None:intergenic | 35.0% |
| ! | TCTATCAAGTGTTGTTCGTT+TGG | + | chr1_2:47163419-47163438 | Msa0073480:intron | 35.0% |
| AGACAAAAAAACACAGGAGA+CGG | + | chr1_2:47163492-47163511 | Msa0073480:CDS | 35.0% | |
| !! | GAGTATTGAAACTGAAGCAA+AGG | - | chr1_2:47163525-47163544 | None:intergenic | 35.0% |
| GTATGAACTCATAAAGCAGA+TGG | + | chr1_2:47163638-47163657 | Msa0073480:intron | 35.0% | |
| CTTCCATCCAATTTCTTACA+GGG | - | chr1_2:47163827-47163846 | None:intergenic | 35.0% | |
| ACTTCCATCCAATTTCTTAC+AGG | - | chr1_2:47163828-47163847 | None:intergenic | 35.0% | |
| TGTAAGAAATTGGATGGAAG+TGG | + | chr1_2:47163827-47163846 | Msa0073480:intron | 35.0% | |
| GGTAAATGAAGTTATGCTTG+TGG | + | chr1_2:47163848-47163867 | Msa0073480:intron | 35.0% | |
| AGACAAGGTATATATAGGAC+TGG | - | chr1_2:47163912-47163931 | None:intergenic | 35.0% | |
| CTTAAAGGCAAACATAGACA+AGG | - | chr1_2:47163927-47163946 | None:intergenic | 35.0% | |
| ! | GGGACAAGCATATTTTACAA+AGG | - | chr1_2:47163963-47163982 | None:intergenic | 35.0% |
| CTTCATACTACAGAATCTAC+AGG | - | chr1_2:47164217-47164236 | None:intergenic | 35.0% | |
| ! | ACTAAGTGAGATTAGCTACA+TGG | - | chr1_2:47164371-47164390 | None:intergenic | 35.0% |
| ATGTAGCTAATCTCACTTAG+TGG | + | chr1_2:47164370-47164389 | Msa0073480:intron | 35.0% | |
| TGTAGCTAATCTCACTTAGT+GGG | + | chr1_2:47164371-47164390 | Msa0073480:intron | 35.0% | |
| TAATCTCACTTAGTGGGATA+AGG | + | chr1_2:47164377-47164396 | Msa0073480:intron | 35.0% | |
| ! | TGGTCATTGTTGTTGTATTC+TGG | + | chr1_2:47164402-47164421 | Msa0073480:intron | 35.0% |
| ! | TTCTTTCGAAGCTGCATTTT+GGG | - | chr1_2:47164639-47164658 | None:intergenic | 35.0% |
| ! | TTTCTTTCGAAGCTGCATTT+TGG | - | chr1_2:47164640-47164659 | None:intergenic | 35.0% |
| CTCCATGCATGTTAATTACT+TGG | + | chr1_2:47164709-47164728 | Msa0073480:intron | 35.0% | |
| TGCAGTGTGAAACAAATGAT+GGG | + | chr1_2:47165258-47165277 | Msa0073480:intron | 35.0% | |
| CTTGATCAAAGGAGATGACA+TGG | + | chr1_2:47162569-47162588 | Msa0073480:CDS | 40.0% | |
| TGATGAAGATTTGCCTGGAA+TGG | + | chr1_2:47162641-47162660 | Msa0073480:CDS | 40.0% | |
| GATGAAGATTTGCCTGGAAT+GGG | + | chr1_2:47162642-47162661 | Msa0073480:CDS | 40.0% | |
| TAGAGATATACTCGCAGTGA+AGG | - | chr1_2:47162680-47162699 | None:intergenic | 40.0% | |
| GTGTAGGAGGTTTAGTATCA+TGG | + | chr1_2:47162938-47162957 | Msa0073480:intron | 40.0% | |
| TAGGAGGTTTAGTATCATGG+TGG | + | chr1_2:47162941-47162960 | Msa0073480:intron | 40.0% | |
| AGGAGGTTTAGTATCATGGT+GGG | + | chr1_2:47162942-47162961 | Msa0073480:intron | 40.0% | |
| ACGGTGGATCATTGTGATTA+TGG | + | chr1_2:47162977-47162996 | Msa0073480:intron | 40.0% | |
| !!! | ATTTTTGGCCCCTCTACAAA+TGG | + | chr1_2:47163224-47163243 | Msa0073480:intron | 40.0% |
| ! | GTTTGGTTCCATTTGTAGAG+GGG | - | chr1_2:47163235-47163254 | None:intergenic | 40.0% |
| GGGAAAATGAGCCTAGATTA+AGG | - | chr1_2:47163767-47163786 | None:intergenic | 40.0% | |
| TGGAAGACCCTGTAAGAAAT+TGG | + | chr1_2:47163817-47163836 | Msa0073480:intron | 40.0% | |
| AGACCCTGTAAGAAATTGGA+TGG | + | chr1_2:47163821-47163840 | Msa0073480:intron | 40.0% | |
| GGGAGTAAAAACTCGCTTAA+AGG | - | chr1_2:47163942-47163961 | None:intergenic | 40.0% | |
| CTGCAATATAAGCTGGGAAT+GGG | - | chr1_2:47163983-47164002 | None:intergenic | 40.0% | |
| TCTGCAATATAAGCTGGGAA+TGG | - | chr1_2:47163984-47164003 | None:intergenic | 40.0% | |
| GCAAGTCTGCAATATAAGCT+GGG | - | chr1_2:47163989-47164008 | None:intergenic | 40.0% | |
| TGCAAGTCTGCAATATAAGC+TGG | - | chr1_2:47163990-47164009 | None:intergenic | 40.0% | |
| TACTCCAACTCTCTCTCTAA+CGG | - | chr1_2:47164131-47164150 | None:intergenic | 40.0% | |
| AGGTGGTAGGAAATAAGCTT+AGG | + | chr1_2:47164167-47164186 | Msa0073480:intron | 40.0% | |
| TGGTAGGAAATAAGCTTAGG+CGG | + | chr1_2:47164170-47164189 | Msa0073480:intron | 40.0% | |
| GAAATAAGCTTAGGCGGTTT+GGG | + | chr1_2:47164176-47164195 | Msa0073480:intron | 40.0% | |
| !! | AGTATATGTCGGCTCAAAAG+AGG | + | chr1_2:47164237-47164256 | Msa0073480:intron | 40.0% |
| !!! | TAGTTTTTTGTGGGGCAATG+TGG | + | chr1_2:47164482-47164501 | Msa0073480:intron | 40.0% |
| !!! | AGTTTTTTGTGGGGCAATGT+GGG | + | chr1_2:47164483-47164502 | Msa0073480:intron | 40.0% |
| TGCAGTGAACTAGAAGCAAT+GGG | - | chr1_2:47164953-47164972 | None:intergenic | 40.0% | |
| ATGCAGTGAACTAGAAGCAA+TGG | - | chr1_2:47164954-47164973 | None:intergenic | 40.0% | |
| ! | TAGTTTGCACTATGATGAGG+TGG | - | chr1_2:47165043-47165062 | None:intergenic | 40.0% |
| GTGCAGTGTGAAACAAATGA+TGG | + | chr1_2:47165257-47165276 | Msa0073480:intron | 40.0% | |
| !! | CAACTTGATGCTGATTTAGC+TGG | + | chr1_2:47165297-47165316 | Msa0073480:CDS | 40.0% |
| !! | TTGATGCTGATTTAGCTGGA+GGG | + | chr1_2:47165301-47165320 | Msa0073480:CDS | 40.0% |
| !! | GCAGCCACTGTACTGATTTA+GGG | - | chr1_2:47162407-47162426 | None:intergenic | 45.0% |
| !! | TGCAGCCACTGTACTGATTT+AGG | - | chr1_2:47162408-47162427 | None:intergenic | 45.0% |
| AGAGGAAGAAACCAAACGAG+AGG | + | chr1_2:47162439-47162458 | Msa0073480:five_prime_UTR | 45.0% | |
| ! | AGGGTTTTTCACCTCTCGTT+TGG | - | chr1_2:47162453-47162472 | None:intergenic | 45.0% |
| AGGAAAATGTCCACACAGGA+AGG | + | chr1_2:47162500-47162519 | Msa0073480:CDS | 45.0% | |
| CCAGGCAAATCTTCATCAAG+AGG | - | chr1_2:47162639-47162658 | None:intergenic | 45.0% | |
| CCTCTTGATGAAGATTTGCC+TGG | + | chr1_2:47162636-47162655 | Msa0073480:CDS | 45.0% | |
| ! | TGGTGGGTATGTCAACATCA+CGG | + | chr1_2:47162958-47162977 | Msa0073480:intron | 45.0% |
| CTTAAAATGCTCGTCCCTCA+CGG | - | chr1_2:47163474-47163493 | None:intergenic | 45.0% | |
| CTTACAGGGTCTTCCAGTTA+TGG | - | chr1_2:47163813-47163832 | None:intergenic | 45.0% | |
| GGAATGTTGTGTTGGATGAG+TGG | + | chr1_2:47164073-47164092 | Msa0073480:intron | 45.0% | |
| GGATGAGTGGTAAGACTAGA+CGG | + | chr1_2:47164086-47164105 | Msa0073480:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+GGG | + | chr1_2:47164087-47164106 | Msa0073480:intron | 45.0% | |
| AGACTAGACGGGATAGGATT+AGG | + | chr1_2:47164098-47164117 | Msa0073480:intron | 45.0% | |
| AGTAGCACCTGTGGTAGAAA+AGG | + | chr1_2:47164147-47164166 | Msa0073480:intron | 45.0% | |
| GGAAATAAGCTTAGGCGGTT+TGG | + | chr1_2:47164175-47164194 | Msa0073480:intron | 45.0% | |
| TCACTTAGTGGGATAAGGCT+TGG | + | chr1_2:47164382-47164401 | Msa0073480:intron | 45.0% | |
| !!! | GTTTTTTGTGGGGCAATGTG+GGG | + | chr1_2:47164484-47164503 | Msa0073480:intron | 45.0% |
| !! | TCAGCATCAAGTTGAGTGTG+TGG | - | chr1_2:47165291-47165310 | None:intergenic | 45.0% |
| !! | CTTGATGCTGATTTAGCTGG+AGG | + | chr1_2:47165300-47165319 | Msa0073480:CDS | 45.0% |
| GGCTGCAGAAGAAGAGTAAG+AGG | + | chr1_2:47162421-47162440 | Msa0073480:five_prime_UTR | 50.0% | |
| TGGGAGGAAAATGTCCACAC+AGG | + | chr1_2:47162496-47162515 | Msa0073480:CDS | 50.0% | |
| CTCTTCTTCACCTTCCTGTG+TGG | - | chr1_2:47162513-47162532 | None:intergenic | 50.0% | |
| CAATAGTGCTGTCCCATTCC+AGG | - | chr1_2:47162657-47162676 | None:intergenic | 50.0% | |
| TGGGTATGTCAACATCACGG+TGG | + | chr1_2:47162961-47162980 | Msa0073480:intron | 50.0% | |
| GTGGTAAGACTAGACGGGAT+AGG | + | chr1_2:47164092-47164111 | Msa0073480:intron | 50.0% | |
| GACACCGTTAGAGAGAGAGT+TGG | + | chr1_2:47164124-47164143 | Msa0073480:intron | 50.0% | |
| AGCACCTGTGGTAGAAAAGG+TGG | + | chr1_2:47164150-47164169 | Msa0073480:intron | 50.0% | |
| ! | CCTACCACCTTTTCTACCAC+AGG | - | chr1_2:47164157-47164176 | None:intergenic | 50.0% |
| CCTGTGGTAGAAAAGGTGGT+AGG | + | chr1_2:47164154-47164173 | Msa0073480:intron | 50.0% | |
| !! | TGTCGGCTCAAAAGAGGTAG+CGG | + | chr1_2:47164243-47164262 | Msa0073480:intron | 50.0% |
| !! | TGCTGATTTAGCTGGAGGGA+TGG | + | chr1_2:47165305-47165324 | Msa0073480:CDS | 50.0% |
| ! | GCTGATTTAGCTGGAGGGAT+GGG | + | chr1_2:47165306-47165325 | Msa0073480:CDS | 50.0% |
| GGGATGGGAATGCCAGATAA+TGG | + | chr1_2:47165321-47165340 | Msa0073480:CDS | 50.0% | |
| TCTTTGCCAGTGTAGCCGTG+AGG | + | chr1_2:47163456-47163475 | Msa0073480:CDS | 55.0% | |
| CTTTGCCAGTGTAGCCGTGA+GGG | + | chr1_2:47163457-47163476 | Msa0073480:CDS | 55.0% | |
| GAGAGTTGGAGTAGCACCTG+TGG | + | chr1_2:47164138-47164157 | Msa0073480:intron | 55.0% | |
| GCAATGTGGGGCAAGGTTGA+TGG | + | chr1_2:47164496-47164515 | Msa0073480:intron | 55.0% | |
| TTGTGGGGCAATGTGGGGCA+AGG | + | chr1_2:47164489-47164508 | Msa0073480:intron | 60.0% | |
| CTCGTCCCTCACGGCTACAC+TGG | - | chr1_2:47163465-47163484 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 47162385 | 47165510 | 47162385 | ID=Msa0073480;Name=Msa0073480 |
| chr1_2 | mRNA | 47162385 | 47165510 | 47162385 | ID=Msa0073480-mRNA-1;Parent=Msa0073480;Name=Msa0073480-mRNA-1;_AED=0.01;_eAED=0.01;_QI=110|1|1|1|0|0.66|3|145|119 |
| chr1_2 | exon | 47162385 | 47162688 | 47162385 | ID=Msa0073480-mRNA-1:exon:14306;Parent=Msa0073480-mRNA-1 |
| chr1_2 | exon | 47163451 | 47163513 | 47163451 | ID=Msa0073480-mRNA-1:exon:14307;Parent=Msa0073480-mRNA-1 |
| chr1_2 | exon | 47165263 | 47165510 | 47165263 | ID=Msa0073480-mRNA-1:exon:14308;Parent=Msa0073480-mRNA-1 |
| chr1_2 | five_prime_UTR | 47162385 | 47162494 | 47162385 | ID=Msa0073480-mRNA-1:five_prime_utr;Parent=Msa0073480-mRNA-1 |
| chr1_2 | CDS | 47162495 | 47162688 | 47162495 | ID=Msa0073480-mRNA-1:cds;Parent=Msa0073480-mRNA-1 |
| chr1_2 | CDS | 47163451 | 47163513 | 47163451 | ID=Msa0073480-mRNA-1:cds;Parent=Msa0073480-mRNA-1 |
| chr1_2 | CDS | 47165263 | 47165365 | 47165263 | ID=Msa0073480-mRNA-1:cds;Parent=Msa0073480-mRNA-1 |
| chr1_2 | three_prime_UTR | 47165366 | 47165510 | 47165366 | ID=Msa0073480-mRNA-1:three_prime_utr;Parent=Msa0073480-mRNA-1 |
| Gene Sequence |
| Protein sequence |
