Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0948320 | XP_003589014.1 | 90.373 | 322 | 30 | 1 | 1 | 322 | 1 | 321 | 0.0 | 595 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0948320 | sp|Q9FFJ8|LIMYB_ARATH | 25.552 | 317 | 211 | 6 | 6 | 322 | 156 | 447 | 6.56e-24 | 104 |
Msa0948320 | sp|Q9FFJ8|LIMYB_ARATH | 36.937 | 111 | 69 | 1 | 20 | 130 | 2 | 111 | 1.06e-16 | 84.0 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0018070 | Msa0948320 | 0.807041 | 6.136228e-50 | -8.615850e-47 |
Msa0018650 | Msa0948320 | 0.801487 | 8.796403e-49 | -8.615850e-47 |
Msa0018940 | Msa0948320 | 0.806972 | 6.344549e-50 | -8.615850e-47 |
Msa0021210 | Msa0948320 | 0.820945 | 5.244210e-53 | -8.615850e-47 |
Msa0031520 | Msa0948320 | 0.926640 | 3.550196e-91 | -8.615850e-47 |
Msa0035150 | Msa0948320 | 0.804017 | 2.642723e-49 | -8.615850e-47 |
Msa0042920 | Msa0948320 | 0.826516 | 2.598485e-54 | -8.615850e-47 |
Msa0044330 | Msa0948320 | 0.823453 | 1.374162e-53 | -8.615850e-47 |
Msa0050200 | Msa0948320 | 0.812347 | 4.438359e-51 | -8.615850e-47 |
Msa0078640 | Msa0948320 | 0.815444 | 9.215883e-52 | -8.615850e-47 |
Msa0089820 | Msa0948320 | 0.825346 | 4.928676e-54 | -8.615850e-47 |
Msa0104230 | Msa0948320 | 0.809176 | 2.153848e-50 | -8.615850e-47 |
Msa0104240 | Msa0948320 | 0.805541 | 1.270006e-49 | -8.615850e-47 |
Msa0104800 | Msa0948320 | 0.801053 | 1.079467e-48 | -8.615850e-47 |
Msa0106710 | Msa0948320 | 0.808003 | 3.834660e-50 | -8.615850e-47 |
Msa0112690 | Msa0948320 | 0.805182 | 1.510350e-49 | -8.615850e-47 |
Msa0114430 | Msa0948320 | 0.826089 | 3.284409e-54 | -8.615850e-47 |
Msa0602980 | Msa0948320 | 0.964943 | 5.744862e-124 | -8.615850e-47 |
Msa0610130 | Msa0948320 | 0.805075 | 1.590382e-49 | -8.615850e-47 |
Msa0610180 | Msa0948320 | 0.800741 | 1.250009e-48 | -8.615850e-47 |
Msa0615010 | Msa0948320 | 0.821134 | 4.745675e-53 | -8.615850e-47 |
Msa0632740 | Msa0948320 | 0.800395 | 1.470868e-48 | -8.615850e-47 |
Msa0645300 | Msa0948320 | 0.925855 | 1.041049e-90 | -8.615850e-47 |
Msa0648240 | Msa0948320 | -0.807414 | 5.114035e-50 | -8.615850e-47 |
Msa0650630 | Msa0948320 | 0.825140 | 5.514988e-54 | -8.615850e-47 |
Msa0659210 | Msa0948320 | 0.800914 | 1.152225e-48 | -8.615850e-47 |
Msa0661320 | Msa0948320 | 0.814532 | 1.468778e-51 | -8.615850e-47 |
Msa0667740 | Msa0948320 | 0.802724 | 4.897840e-49 | -8.615850e-47 |
Msa0672480 | Msa0948320 | 0.804313 | 2.293836e-49 | -8.615850e-47 |
Msa0701010 | Msa0948320 | 0.824950 | 6.114667e-54 | -8.615850e-47 |
Msa0703780 | Msa0948320 | 0.825456 | 4.640507e-54 | -8.615850e-47 |
Msa0705190 | Msa0948320 | 0.822186 | 2.710131e-53 | -8.615850e-47 |
Msa0707250 | Msa0948320 | 0.808491 | 3.017992e-50 | -8.615850e-47 |
Msa0721280 | Msa0948320 | 0.803896 | 2.800975e-49 | -8.615850e-47 |
Msa0731940 | Msa0948320 | 0.814596 | 1.421272e-51 | -8.615850e-47 |
Msa0745260 | Msa0948320 | -0.809744 | 1.626328e-50 | -8.615850e-47 |
Msa0747270 | Msa0948320 | 0.802641 | 5.093883e-49 | -8.615850e-47 |
Msa0748730 | Msa0948320 | 0.800436 | 1.442479e-48 | -8.615850e-47 |
Msa0748970 | Msa0948320 | 0.810000 | 1.432641e-50 | -8.615850e-47 |
Msa0750650 | Msa0948320 | 0.815469 | 9.096595e-52 | -8.615850e-47 |
Msa0750850 | Msa0948320 | 0.802965 | 4.367326e-49 | -8.615850e-47 |
Msa0755180 | Msa0948320 | 0.844022 | 9.776577e-59 | -8.615850e-47 |
Msa0756380 | Msa0948320 | 0.807074 | 6.036592e-50 | -8.615850e-47 |
Msa0756460 | Msa0948320 | 0.801473 | 8.857395e-49 | -8.615850e-47 |
Msa0763890 | Msa0948320 | 0.815474 | 9.076968e-52 | -8.615850e-47 |
Msa0763920 | Msa0948320 | 0.818558 | 1.841563e-52 | -8.615850e-47 |
Msa0766630 | Msa0948320 | 0.800405 | 1.463557e-48 | -8.615850e-47 |
Msa0768290 | Msa0948320 | 0.823590 | 1.276147e-53 | -8.615850e-47 |
Msa0768310 | Msa0948320 | 0.819936 | 8.937513e-53 | -8.615850e-47 |
Msa0768370 | Msa0948320 | 0.829932 | 3.902556e-55 | -8.615850e-47 |
Msa0773180 | Msa0948320 | 0.837543 | 4.884780e-57 | -8.615850e-47 |
Msa0773850 | Msa0948320 | 0.820380 | 7.071124e-53 | -8.615850e-47 |
Msa0804810 | Msa0948320 | 0.873412 | 1.500813e-67 | -8.615850e-47 |
Msa0807370 | Msa0948320 | 0.816531 | 5.270984e-52 | -8.615850e-47 |
Msa0810220 | Msa0948320 | 0.802645 | 5.085363e-49 | -8.615850e-47 |
Msa0810270 | Msa0948320 | 0.806081 | 9.783215e-50 | -8.615850e-47 |
Msa0817460 | Msa0948320 | 0.811189 | 7.929862e-51 | -8.615850e-47 |
Msa0820850 | Msa0948320 | 0.821767 | 3.389073e-53 | -8.615850e-47 |
Msa0831850 | Msa0948320 | 0.824541 | 7.632786e-54 | -8.615850e-47 |
Msa0832090 | Msa0948320 | 0.808598 | 2.863513e-50 | -8.615850e-47 |
Msa0832150 | Msa0948320 | 0.802166 | 6.381426e-49 | -8.615850e-47 |
Msa0832340 | Msa0948320 | 0.819763 | 9.790209e-53 | -8.615850e-47 |
Msa0131770 | Msa0948320 | 0.817625 | 2.992935e-52 | -8.615850e-47 |
Msa0135660 | Msa0948320 | 0.872203 | 3.807746e-67 | -8.615850e-47 |
Msa0140500 | Msa0948320 | -0.806929 | 6.478813e-50 | -8.615850e-47 |
Msa0150230 | Msa0948320 | 0.811706 | 6.122392e-51 | -8.615850e-47 |
Msa0150840 | Msa0948320 | 0.816968 | 4.206133e-52 | -8.615850e-47 |
Msa0156700 | Msa0948320 | 0.803411 | 3.530983e-49 | -8.615850e-47 |
Msa0167980 | Msa0948320 | 0.806027 | 1.003861e-49 | -8.615850e-47 |
Msa0170220 | Msa0948320 | 0.802039 | 6.777260e-49 | -8.615850e-47 |
Msa0171140 | Msa0948320 | 0.800889 | 1.165986e-48 | -8.615850e-47 |
Msa0178510 | Msa0948320 | 0.804061 | 2.587682e-49 | -8.615850e-47 |
Msa0180500 | Msa0948320 | 0.834022 | 3.811115e-56 | -8.615850e-47 |
Msa0198910 | Msa0948320 | 0.903889 | 2.174641e-79 | -8.615850e-47 |
Msa0219240 | Msa0948320 | 0.810742 | 9.906159e-51 | -8.615850e-47 |
Msa0220730 | Msa0948320 | 0.800769 | 1.233560e-48 | -8.615850e-47 |
Msa0233080 | Msa0948320 | 0.857669 | 1.394739e-62 | -8.615850e-47 |
Msa0236510 | Msa0948320 | -0.813341 | 2.688030e-51 | -8.615850e-47 |
Msa0367870 | Msa0948320 | 0.807172 | 5.754695e-50 | -8.615850e-47 |
Msa0381610 | Msa0948320 | -0.826367 | 2.820114e-54 | -8.615850e-47 |
Msa0385840 | Msa0948320 | 0.822512 | 2.277304e-53 | -8.615850e-47 |
Msa0387280 | Msa0948320 | 0.801453 | 8.939128e-49 | -8.615850e-47 |
Msa0394260 | Msa0948320 | 0.800975 | 1.119978e-48 | -8.615850e-47 |
Msa0398200 | Msa0948320 | 0.804698 | 1.906195e-49 | -8.615850e-47 |
Msa0409690 | Msa0948320 | 0.807019 | 6.201302e-50 | -8.615850e-47 |
Msa0412840 | Msa0948320 | 0.806027 | 1.003861e-49 | -8.615850e-47 |
Msa0413410 | Msa0948320 | 0.848442 | 6.112266e-60 | -8.615850e-47 |
Msa0416650 | Msa0948320 | 0.804649 | 1.951849e-49 | -8.615850e-47 |
Msa0424320 | Msa0948320 | 0.801848 | 7.418914e-49 | -8.615850e-47 |
Msa0425790 | Msa0948320 | 0.810877 | 9.265626e-51 | -8.615850e-47 |
Msa0430920 | Msa0948320 | 0.812083 | 5.067744e-51 | -8.615850e-47 |
Msa0433410 | Msa0948320 | -0.809787 | 1.592068e-50 | -8.615850e-47 |
Msa0444750 | Msa0948320 | -0.815024 | 1.142815e-51 | -8.615850e-47 |
Msa0446270 | Msa0948320 | 0.805801 | 1.120314e-49 | -8.615850e-47 |
Msa0450400 | Msa0948320 | -0.807726 | 4.391248e-50 | -8.615850e-47 |
Msa0460590 | Msa0948320 | 0.807250 | 5.540854e-50 | -8.615850e-47 |
Msa0466840 | Msa0948320 | -0.804236 | 2.379757e-49 | -8.615850e-47 |
Msa0471550 | Msa0948320 | 0.804811 | 1.805498e-49 | -8.615850e-47 |
Msa0241140 | Msa0948320 | 0.810773 | 9.754839e-51 | -8.615850e-47 |
Msa0251640 | Msa0948320 | 0.917136 | 7.668826e-86 | -8.615850e-47 |
Msa0259210 | Msa0948320 | 0.818698 | 1.711575e-52 | -8.615850e-47 |
Msa0270500 | Msa0948320 | 0.805689 | 1.182552e-49 | -8.615850e-47 |
Msa0271770 | Msa0948320 | 0.827045 | 1.943424e-54 | -8.615850e-47 |
Msa0278110 | Msa0948320 | 0.812412 | 4.294650e-51 | -8.615850e-47 |
Msa0278190 | Msa0948320 | 0.825244 | 5.211342e-54 | -8.615850e-47 |
Msa0289330 | Msa0948320 | 0.800470 | 1.419896e-48 | -8.615850e-47 |
Msa0319170 | Msa0948320 | 0.826233 | 3.035330e-54 | -8.615850e-47 |
Msa0321310 | Msa0948320 | 0.806699 | 7.247191e-50 | -8.615850e-47 |
Msa0336310 | Msa0948320 | 0.807865 | 4.102188e-50 | -8.615850e-47 |
Msa0336320 | Msa0948320 | 0.833059 | 6.627202e-56 | -8.615850e-47 |
Msa0342750 | Msa0948320 | 0.822722 | 2.034506e-53 | -8.615850e-47 |
Msa0343850 | Msa0948320 | 0.830029 | 3.696483e-55 | -8.615850e-47 |
Msa0350320 | Msa0948320 | -0.805163 | 1.523986e-49 | -8.615850e-47 |
Msa0363790 | Msa0948320 | 0.805334 | 1.403598e-49 | -8.615850e-47 |
Msa0485490 | Msa0948320 | 0.800139 | 1.657879e-48 | -8.615850e-47 |
Msa0490140 | Msa0948320 | 0.936668 | 1.202002e-97 | -8.615850e-47 |
Msa0514320 | Msa0948320 | 0.911326 | 6.905454e-83 | -8.615850e-47 |
Msa0518380 | Msa0948320 | 0.810045 | 1.400982e-50 | -8.615850e-47 |
Msa0519000 | Msa0948320 | 0.800311 | 1.529369e-48 | -8.615850e-47 |
Msa0519640 | Msa0948320 | 0.812212 | 4.749656e-51 | -8.615850e-47 |
Msa0521740 | Msa0948320 | 0.806632 | 7.485881e-50 | -8.615850e-47 |
Msa0523940 | Msa0948320 | 0.822418 | 2.394705e-53 | -8.615850e-47 |
Msa0530400 | Msa0948320 | 0.805485 | 1.304891e-49 | -8.615850e-47 |
Msa0532960 | Msa0948320 | 0.803861 | 2.848075e-49 | -8.615850e-47 |
Msa0545700 | Msa0948320 | 0.820110 | 8.153719e-53 | -8.615850e-47 |
Msa0549780 | Msa0948320 | 0.801046 | 1.083040e-48 | -8.615850e-47 |
Msa0585230 | Msa0948320 | 0.816215 | 6.201669e-52 | -8.615850e-47 |
Msa0844110 | Msa0948320 | 0.812573 | 3.961800e-51 | -8.615850e-47 |
Msa0844420 | Msa0948320 | 0.822928 | 1.821985e-53 | -8.615850e-47 |
Msa0844440 | Msa0948320 | 0.802816 | 4.687533e-49 | -8.615850e-47 |
Msa0844450 | Msa0948320 | 0.802013 | 6.862325e-49 | -8.615850e-47 |
Msa0844490 | Msa0948320 | 0.860330 | 2.226804e-63 | -8.615850e-47 |
Msa0848990 | Msa0948320 | 0.804847 | 1.775056e-49 | -8.615850e-47 |
Msa0849030 | Msa0948320 | 0.838842 | 2.260770e-57 | -8.615850e-47 |
Msa0857640 | Msa0948320 | 0.832720 | 8.045686e-56 | -8.615850e-47 |
Msa0861130 | Msa0948320 | 0.821586 | 3.732014e-53 | -8.615850e-47 |
Msa0866410 | Msa0948320 | 0.814470 | 1.515947e-51 | -8.615850e-47 |
Msa0868160 | Msa0948320 | 0.812605 | 3.897984e-51 | -8.615850e-47 |
Msa0877250 | Msa0948320 | 0.843159 | 1.663263e-58 | -8.615850e-47 |
Msa0888260 | Msa0948320 | 0.806577 | 7.687902e-50 | -8.615850e-47 |
Msa0890550 | Msa0948320 | 0.804413 | 2.186662e-49 | -8.615850e-47 |
Msa0894710 | Msa0948320 | 0.820409 | 6.964131e-53 | -8.615850e-47 |
Msa0897330 | Msa0948320 | 0.839206 | 1.820261e-57 | -8.615850e-47 |
Msa0899430 | Msa0948320 | 0.819981 | 8.730210e-53 | -8.615850e-47 |
Msa0899450 | Msa0948320 | 0.819014 | 1.450539e-52 | -8.615850e-47 |
Msa0901070 | Msa0948320 | 0.810542 | 1.094359e-50 | -8.615850e-47 |
Msa0903620 | Msa0948320 | 0.809847 | 1.545237e-50 | -8.615850e-47 |
Msa0914270 | Msa0948320 | 0.855193 | 7.433664e-62 | -8.615850e-47 |
Msa0921420 | Msa0948320 | 0.805686 | 1.184166e-49 | -8.615850e-47 |
Msa0927380 | Msa0948320 | 0.842916 | 1.930284e-58 | -8.615850e-47 |
Msa0933100 | Msa0948320 | 0.812859 | 3.429930e-51 | -8.615850e-47 |
Msa0936300 | Msa0948320 | 0.836898 | 7.142305e-57 | -8.615850e-47 |
Msa0946690 | Msa0948320 | -0.800943 | 1.136876e-48 | -8.615850e-47 |
Msa0948320 | Msa0953120 | 0.803694 | 3.084276e-49 | -8.615850e-47 |
Msa0948320 | Msa0958550 | 0.816369 | 5.731032e-52 | -8.615850e-47 |
Msa0948320 | Msa0960390 | 0.816596 | 5.097489e-52 | -8.615850e-47 |
Msa0948320 | Msa0962840 | 0.816550 | 5.219124e-52 | -8.615850e-47 |
Msa0948320 | Msa0964900 | 0.812229 | 4.709730e-51 | -8.615850e-47 |
Msa0948320 | Msa0966750 | 0.823235 | 1.544671e-53 | -8.615850e-47 |
Msa0948320 | Msa0969370 | 0.811817 | 5.789638e-51 | -8.615850e-47 |
Msa0948320 | Msa0969520 | 0.819161 | 1.343204e-52 | -8.615850e-47 |
Msa0948320 | Msa0969810 | 0.826779 | 2.249786e-54 | -8.615850e-47 |
Msa0948320 | Msa0973100 | 0.833999 | 3.861647e-56 | -8.615850e-47 |
Msa0948320 | Msa0974070 | 0.825397 | 4.794047e-54 | -8.615850e-47 |
Msa0948320 | Msa0974080 | 0.868388 | 6.776521e-66 | -8.615850e-47 |
Msa0948320 | Msa0976670 | 0.812317 | 4.506558e-51 | -8.615850e-47 |
Msa0948320 | Msa0994370 | 0.800277 | 1.554469e-48 | -8.615850e-47 |
Msa0948320 | Msa1000880 | 0.805117 | 1.558159e-49 | -8.615850e-47 |
Msa0948320 | Msa1000890 | 0.838137 | 3.437444e-57 | -8.615850e-47 |
Msa0948320 | Msa1000900 | 0.827222 | 1.762859e-54 | -8.615850e-47 |
Msa0948320 | Msa1001390 | 0.828609 | 8.174105e-55 | -8.615850e-47 |
Msa0948320 | Msa1002850 | 0.822909 | 1.840818e-53 | -8.615850e-47 |
Msa0948320 | Msa1023950 | 0.806706 | 7.221048e-50 | -8.615850e-47 |
Msa0948320 | Msa1026940 | 0.808372 | 3.198901e-50 | -8.615850e-47 |
Msa0948320 | Msa1029080 | -0.812040 | 5.176825e-51 | -8.615850e-47 |
Msa0948320 | Msa1034500 | 0.803851 | 2.862423e-49 | -8.615850e-47 |
Msa0948320 | Msa1036610 | 0.805640 | 1.210890e-49 | -8.615850e-47 |
Msa0948320 | Msa1063420 | 0.825232 | 5.244321e-54 | -8.615850e-47 |
Msa0948320 | Msa1072900 | 0.800186 | 1.621762e-48 | -8.615850e-47 |
Msa0948320 | Msa1075220 | -0.804268 | 2.343246e-49 | -8.615850e-47 |
Msa0948320 | Msa1075540 | 0.809504 | 1.831667e-50 | -8.615850e-47 |
Msa0948320 | Msa1076960 | 0.803123 | 4.050442e-49 | -8.615850e-47 |
Msa0948320 | Msa1081790 | -0.803883 | 2.818603e-49 | -8.615850e-47 |
Msa0948320 | Msa1098250 | 0.829629 | 4.625684e-55 | -8.615850e-47 |
Msa0948320 | Msa1098270 | 0.801203 | 1.006064e-48 | -8.615850e-47 |
Msa0948320 | Msa1099980 | 0.803412 | 3.530309e-49 | -8.615850e-47 |
Msa0948320 | Msa1103980 | 0.811011 | 8.666166e-51 | -8.615850e-47 |
Msa0948320 | Msa1111870 | 0.835641 | 1.490593e-56 | -8.615850e-47 |
Msa0948320 | Msa1113170 | 0.828232 | 1.008046e-54 | -8.615850e-47 |
Msa0948320 | Msa1121480 | 0.828176 | 1.039713e-54 | -8.615850e-47 |
Msa0948320 | Msa1121490 | 0.842486 | 2.511477e-58 | -8.615850e-47 |
Msa0948320 | Msa1122860 | 0.805011 | 1.639697e-49 | -8.615850e-47 |
Msa0948320 | Msa1137570 | 0.848415 | 6.220880e-60 | -8.615850e-47 |
Msa0948320 | Msa1142670 | 0.829094 | 6.237212e-55 | -8.615850e-47 |
Msa0948320 | Msa1156020 | 0.816817 | 4.547259e-52 | -8.615850e-47 |
Msa0948320 | Msa1156170 | -0.814478 | 1.509548e-51 | -8.615850e-47 |
Msa0948320 | Msa1162550 | -0.805272 | 1.446077e-49 | -8.615850e-47 |
Msa0948320 | Msa1174040 | 0.806602 | 7.594222e-50 | -8.615850e-47 |
Msa0948320 | Msa1177560 | 0.802103 | 6.576084e-49 | -8.615850e-47 |
Msa0948320 | Msa1185110 | 0.805884 | 1.075918e-49 | -8.615850e-47 |
Msa0948320 | Msa1186360 | 0.813169 | 2.933136e-51 | -8.615850e-47 |
Msa0948320 | Msa1195180 | 0.800066 | 1.715283e-48 | -8.615850e-47 |
Msa0948320 | Msa1195190 | 0.803304 | 3.715316e-49 | -8.615850e-47 |
Msa0948320 | Msa1209530 | 0.807150 | 5.818571e-50 | -8.615850e-47 |
Msa0948320 | Msa1215920 | 0.804396 | 2.204074e-49 | -8.615850e-47 |
Msa0948320 | Msa1217650 | -0.811163 | 8.031981e-51 | -8.615850e-47 |
Msa0948320 | Msa1227730 | 0.825622 | 4.239713e-54 | -8.615850e-47 |
Msa0948320 | Msa1232740 | 0.828943 | 6.787729e-55 | -8.615850e-47 |
Msa0948320 | Msa1237020 | 0.809067 | 2.272558e-50 | -8.615850e-47 |
Msa0948320 | Msa1237980 | 0.806033 | 1.000890e-49 | -8.615850e-47 |
Msa0948320 | Msa1248370 | 0.811628 | 6.364495e-51 | -8.615850e-47 |
Msa0948320 | Msa1249280 | 0.806146 | 9.475540e-50 | -8.615850e-47 |
Msa0948320 | Msa1254730 | 0.807397 | 5.157204e-50 | -8.615850e-47 |
Msa0948320 | Msa1270660 | 0.821205 | 4.570185e-53 | -8.615850e-47 |
Msa0948320 | Msa1270730 | 0.825811 | 3.824658e-54 | -8.615850e-47 |
Msa0948320 | Msa1271130 | 0.806537 | 7.841127e-50 | -8.615850e-47 |
Msa0948320 | Msa1276600 | 0.816387 | 5.676500e-52 | -8.615850e-47 |
Msa0948320 | Msa1276890 | 0.810786 | 9.692674e-51 | -8.615850e-47 |
Msa0948320 | Msa1284680 | 0.833476 | 5.218741e-56 | -8.615850e-47 |
Msa0948320 | Msa1286800 | 0.844365 | 7.909526e-59 | -8.615850e-47 |
Msa0948320 | Msa1287190 | 0.840387 | 8.965442e-58 | -8.615850e-47 |
Msa0948320 | Msa1287220 | 0.810020 | 1.418636e-50 | -8.615850e-47 |
Msa0948320 | Msa1305810 | 0.806406 | 8.353521e-50 | -8.615850e-47 |
Msa0948320 | Msa1313320 | 0.835559 | 1.563633e-56 | -8.615850e-47 |
Msa0948320 | Msa1331080 | 0.838447 | 2.860616e-57 | -8.615850e-47 |
Msa0948320 | Msa1345220 | 0.830248 | 3.268334e-55 | -8.615850e-47 |
Msa0948320 | Msa1353470 | 0.813109 | 3.022097e-51 | -8.615850e-47 |
Msa0948320 | Msa1357890 | 0.803060 | 4.174346e-49 | -8.615850e-47 |
Msa0948320 | Msa1366810 | 0.849245 | 3.658660e-60 | -8.615850e-47 |
Msa0948320 | Msa1366970 | 0.854140 | 1.500582e-61 | -8.615850e-47 |
Msa0948320 | Msa1372150 | 0.810695 | 1.014170e-50 | -8.615850e-47 |
Msa0948320 | Msa1388160 | 0.800044 | 1.733120e-48 | -8.615850e-47 |
Msa0948320 | Msa1390700 | 0.824536 | 7.653877e-54 | -8.615850e-47 |
Msa0948320 | Msa1392910 | 0.817906 | 2.585669e-52 | -8.615850e-47 |
Msa0948320 | Msa1394310 | 0.855458 | 6.225810e-62 | -8.615850e-47 |
Msa0948320 | Msa1398090 | 0.801853 | 7.400098e-49 | -8.615850e-47 |
Msa0948320 | Msa1410690 | 0.803587 | 3.246406e-49 | -8.615850e-47 |
Msa0948320 | Msa1412530 | 0.810910 | 9.113219e-51 | -8.615850e-47 |
Msa0948320 | Msa1419990 | 0.814506 | 1.488006e-51 | -8.615850e-47 |
Msa0948320 | Msa1420270 | 0.802712 | 4.925138e-49 | -8.615850e-47 |
Msa0948320 | Msa1420820 | 0.817100 | 3.928421e-52 | -8.615850e-47 |
Msa0948320 | Msa1437270 | 0.817789 | 2.748361e-52 | -8.615850e-47 |
Msa0948320 | Msa1443060 | 0.804993 | 1.654565e-49 | -8.615850e-47 |
Msa0948320 | Msa1445390 | -0.804013 | 2.648150e-49 | -8.615850e-47 |
Msa0948320 | Msa1449340 | -0.809330 | 1.995657e-50 | -8.615850e-47 |
Msa0948320 | Msa1451620 | -0.805154 | 1.530910e-49 | -8.615850e-47 |
Msa0948320 | Msa1457160 | 0.811455 | 6.941169e-51 | -8.615850e-47 |
Msa0948320 | Msa1458750 | 0.814904 | 1.214948e-51 | -8.615850e-47 |
Msa0948320 | Msa1466540 | 0.802960 | 4.376883e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0948320 | MtrunA17_Chr2g0285481 | 62.654 | 324 | 115 | 4 | 2 | 321 | 1 | 322 | 2.69e-142 | 405 |
Msa0948320 | MtrunA17_Chr1g0172741 | 62.037 | 324 | 117 | 4 | 2 | 321 | 1 | 322 | 7.31e-141 | 401 |
Msa0948320 | MtrunA17_Chr8g0334551 | 56.707 | 328 | 135 | 2 | 1 | 321 | 1 | 328 | 2.05e-128 | 370 |
Msa0948320 | MtrunA17_Chr2g0321391 | 67.213 | 244 | 77 | 2 | 79 | 321 | 3 | 244 | 7.38e-116 | 335 |
Msa0948320 | MtrunA17_Chr5g0422701 | 65.174 | 201 | 67 | 2 | 122 | 321 | 14 | 212 | 4.63e-87 | 260 |
Msa0948320 | MtrunA17_Chr2g0295811 | 41.629 | 221 | 111 | 6 | 119 | 321 | 10 | 230 | 3.54e-44 | 151 |
Msa0948320 | MtrunA17_Chr5g0422691 | 61.957 | 92 | 34 | 1 | 13 | 103 | 14 | 105 | 8.06e-35 | 122 |
Msa0948320 | MtrunA17_Chr2g0295611 | 62.500 | 96 | 35 | 1 | 100 | 194 | 1 | 96 | 3.24e-33 | 118 |
Msa0948320 | MtrunA17_Chr5g0402821 | 27.848 | 316 | 198 | 9 | 22 | 315 | 16 | 323 | 1.33e-25 | 104 |
Msa0948320 | MtrunA17_Chr3g0113081 | 38.816 | 152 | 84 | 2 | 22 | 173 | 185 | 327 | 1.47e-25 | 107 |
Msa0948320 | MtrunA17_Chr3g0113081 | 28.479 | 309 | 159 | 8 | 12 | 311 | 373 | 628 | 1.28e-24 | 104 |
Msa0948320 | MtrunA17_Chr3g0113081 | 36.567 | 134 | 78 | 2 | 11 | 144 | 3 | 129 | 1.19e-17 | 83.6 |
Msa0948320 | MtrunA17_Chr8g0362511 | 36.095 | 169 | 103 | 3 | 21 | 187 | 67 | 232 | 1.69e-25 | 105 |
Msa0948320 | MtrunA17_Chr5g0405761 | 28.428 | 299 | 184 | 7 | 19 | 312 | 47 | 320 | 8.04e-24 | 99.8 |
Msa0948320 | MtrunA17_Chr6g0469501 | 63.793 | 58 | 21 | 0 | 264 | 321 | 1 | 58 | 1.12e-21 | 86.7 |
Msa0948320 | MtrunA17_Chr1g0176881 | 29.412 | 136 | 95 | 1 | 21 | 156 | 21 | 155 | 5.73e-15 | 75.5 |
Msa0948320 | MtrunA17_Chr1g0176881 | 29.655 | 145 | 99 | 2 | 2 | 146 | 175 | 316 | 5.73e-15 | 75.5 |
Msa0948320 | MtrunA17_Chr8g0360271 | 25.256 | 293 | 183 | 11 | 33 | 310 | 21 | 292 | 1.63e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0948320 | AT5G05800.1 | 25.552 | 317 | 211 | 6 | 6 | 322 | 156 | 447 | 6.67e-25 | 104 |
Msa0948320 | AT5G05800.1 | 36.937 | 111 | 69 | 1 | 20 | 130 | 2 | 111 | 1.08e-17 | 84.0 |
Msa0948320 | AT5G05800.5 | 25.552 | 317 | 211 | 6 | 6 | 322 | 156 | 447 | 6.67e-25 | 104 |
Msa0948320 | AT5G05800.5 | 36.937 | 111 | 69 | 1 | 20 | 130 | 2 | 111 | 1.08e-17 | 84.0 |
Msa0948320 | AT5G05800.3 | 25.552 | 317 | 211 | 6 | 6 | 322 | 156 | 447 | 6.67e-25 | 104 |
Msa0948320 | AT5G05800.3 | 36.937 | 111 | 69 | 1 | 20 | 130 | 2 | 111 | 1.08e-17 | 84.0 |
Msa0948320 | AT5G05800.2 | 25.552 | 317 | 211 | 6 | 6 | 322 | 156 | 447 | 6.67e-25 | 104 |
Msa0948320 | AT5G05800.2 | 36.937 | 111 | 69 | 1 | 20 | 130 | 2 | 111 | 1.08e-17 | 84.0 |
Msa0948320 | AT5G05800.4 | 25.552 | 317 | 211 | 6 | 6 | 322 | 156 | 447 | 6.67e-25 | 104 |
Msa0948320 | AT5G05800.4 | 36.937 | 111 | 69 | 1 | 20 | 130 | 2 | 111 | 1.08e-17 | 84.0 |
Msa0948320 | AT3G11290.2 | 26.214 | 309 | 187 | 8 | 20 | 310 | 163 | 448 | 1.81e-20 | 92.0 |
Msa0948320 | AT3G11290.1 | 26.214 | 309 | 187 | 8 | 20 | 310 | 163 | 448 | 1.81e-20 | 92.0 |
Msa0948320 | AT2G24960.1 | 29.197 | 137 | 96 | 1 | 8 | 144 | 155 | 290 | 5.17e-15 | 76.3 |
Msa0948320 | AT2G24960.1 | 25.874 | 143 | 105 | 1 | 12 | 154 | 2 | 143 | 6.91e-11 | 63.9 |
Msa0948320 | AT2G24960.2 | 29.197 | 137 | 96 | 1 | 8 | 144 | 155 | 290 | 5.40e-15 | 76.3 |
Msa0948320 | AT2G24960.2 | 27.972 | 143 | 102 | 1 | 12 | 154 | 314 | 455 | 1.94e-12 | 68.6 |
Msa0948320 | AT2G24960.2 | 26.667 | 135 | 98 | 1 | 20 | 154 | 10 | 143 | 7.49e-11 | 63.5 |
Msa0948320 | AT3G11310.1 | 34.266 | 143 | 88 | 2 | 20 | 157 | 171 | 312 | 9.18e-14 | 72.4 |
Msa0948320 | AT4G02210.1 | 27.673 | 159 | 113 | 2 | 13 | 170 | 2 | 159 | 2.73e-11 | 64.7 |
Msa0948320 | AT4G02210.2 | 27.673 | 159 | 113 | 2 | 13 | 170 | 2 | 159 | 2.73e-11 | 64.7 |
Msa0948320 | AT2G19220.1 | 26.332 | 319 | 197 | 12 | 9 | 317 | 149 | 439 | 3.75e-11 | 64.3 |
Find 76 sgRNAs with CRISPR-Local
Find 196 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAGCATGGTATAACTTATT+TGG | 0.134716 | 6_3:+32356492 | Msa0948320:CDS |
ACAACTGAATTTGGAAATAT+TGG | 0.148866 | 6_3:+32356895 | Msa0948320:CDS |
AAGAAGGGTGGACAAATATT+AGG | 0.206643 | 6_3:+32356388 | Msa0948320:CDS |
GTTGGAGCAACAACTGAATT+TGG | 0.213211 | 6_3:+32356886 | Msa0948320:CDS |
GGCAGAAAACAAAAGCTATT+TGG | 0.232374 | 6_3:+32356283 | Msa0948320:CDS |
AACTTATTTGGGAGAGAAAC+TGG | 0.287945 | 6_3:+32356504 | Msa0948320:CDS |
TTGGGAGAGAAACTGGATTA+GGG | 0.298488 | 6_3:+32356511 | Msa0948320:CDS |
TTTGGGAGAGAAACTGGATT+AGG | 0.315464 | 6_3:+32356510 | Msa0948320:CDS |
GAAATAAACATCTCCCTTGC+AGG | 0.323302 | 6_3:-32357186 | None:intergenic |
AAACTTTGTGAAAGCATGTT+TGG | 0.334075 | 6_3:+32356323 | Msa0948320:CDS |
GCAGAAAACAAAAGCTATTT+GGG | 0.339319 | 6_3:+32356284 | Msa0948320:CDS |
GTCCGGTTAAATTATGAAAT+CGG | 0.352053 | 6_3:-32356413 | None:intergenic |
TGTATTACATACCAGTTGTT+TGG | 0.352266 | 6_3:-32356583 | None:intergenic |
CAACTGAATTTGGAAATATT+GGG | 0.356640 | 6_3:+32356896 | Msa0948320:CDS |
GAGCATGGTATAACTTATTT+GGG | 0.363157 | 6_3:+32356493 | Msa0948320:CDS |
TTCAAGGATGTAGTGGCTAA+TGG | 0.366838 | 6_3:+32356745 | Msa0948320:CDS |
CAGAGGAGAAGAGGTTGAAT+TGG | 0.373243 | 6_3:+32357220 | Msa0948320:CDS |
GTCCGATTTCATAATTTAAC+CGG | 0.374307 | 6_3:+32356411 | Msa0948320:CDS |
TTGGTCTCCCACCACTCATC+AGG | 0.410369 | 6_3:-32356564 | None:intergenic |
GTTCCTCCTCACCTAGTGAT+GGG | 0.415978 | 6_3:+32356259 | Msa0948320:CDS |
GAAAAGTGTGGTTAACTCAT+TGG | 0.420206 | 6_3:-32356725 | None:intergenic |
AGAAGGGTGGACAAATATTA+GGG | 0.422862 | 6_3:+32356389 | Msa0948320:CDS |
ATGATCTTTATTTGCATGCT+CGG | 0.426517 | 6_3:+32357139 | Msa0948320:CDS |
GGTTCCTCCTCACCTAGTGA+TGG | 0.438340 | 6_3:+32356258 | Msa0948320:CDS |
TTCCTCCTCACCTAGTGATG+GGG | 0.476214 | 6_3:+32356260 | Msa0948320:CDS |
AGAAGGCTCAACTAAAGAAT+AGG | 0.479515 | 6_3:+32356445 | Msa0948320:CDS |
TCCTCCTCACCTAGTGATGG+GGG | 0.484199 | 6_3:+32356261 | Msa0948320:CDS |
GCTGCTGGTAATGCATCTAT+TGG | 0.486263 | 6_3:+32357075 | Msa0948320:CDS |
GATGAGGCAGTGGCTGTAGA+AGG | 0.502147 | 6_3:+32356838 | Msa0948320:CDS |
AGCCTTCTCATACTTCAGTC+CGG | 0.504703 | 6_3:-32356430 | None:intergenic |
CGTACCAACACGTTCTCCCT+TGG | 0.505137 | 6_3:-32356355 | None:intergenic |
TGGCTAATGGAGAGTACACT+TGG | 0.522261 | 6_3:+32356758 | Msa0948320:CDS |
GCAGTGGCTGTAGAAGGATC+TGG | 0.527670 | 6_3:+32356844 | Msa0948320:CDS |
ATGACAGTCTGAGAAAGGAT+TGG | 0.531322 | 6_3:+32356469 | Msa0948320:CDS |
CTTCTCCTCTGAACCTCGTA+GGG | 0.535159 | 6_3:-32357208 | None:intergenic |
GTGGTGGGAGACCAAACAAC+TGG | 0.536532 | 6_3:+32356572 | Msa0948320:CDS |
AGGTTAGTCATGAACGGCAG+TGG | 0.537233 | 6_3:-32357264 | None:intergenic |
TAGGTATGACAGTCTGAGAA+AGG | 0.543958 | 6_3:+32356464 | Msa0948320:CDS |
CGTTCTCGCAATGATGCTGC+TGG | 0.555390 | 6_3:+32357060 | Msa0948320:CDS |
TATTTCCCTACGAGGTTCAG+AGG | 0.555424 | 6_3:+32357203 | Msa0948320:CDS |
GGAGAGAAACTGGATTAGGG+TGG | 0.557144 | 6_3:+32356514 | Msa0948320:CDS |
ATCATTTGAGACTTCATCCA+TGG | 0.558263 | 6_3:-32357121 | None:intergenic |
TGATGATGTTTAAGCCTGCA+AGG | 0.560100 | 6_3:+32357172 | Msa0948320:CDS |
GTCAAAAGAGTGGTGAGAAG+AGG | 0.562252 | 6_3:+32356944 | Msa0948320:CDS |
CATGACTAACCTGTGTGACT+AGG | 0.562786 | 6_3:+32357275 | Msa0948320:CDS |
AGACTTCATCCATGGTGTGA+AGG | 0.567550 | 6_3:-32357113 | None:intergenic |
TACGAGGTTCAGAGGAGAAG+AGG | 0.567800 | 6_3:+32357211 | Msa0948320:CDS |
ATGTTTGGAGCAAGTCTCCA+AGG | 0.570714 | 6_3:+32356338 | Msa0948320:CDS |
TACACTTGGGCACCATCATG+TGG | 0.573130 | 6_3:+32356772 | Msa0948320:CDS |
TGCATCTATTGGTGAAGTGA+TGG | 0.591393 | 6_3:+32357086 | Msa0948320:CDS |
TCTTCTCCTCTGAACCTCGT+AGG | 0.595412 | 6_3:-32357209 | None:intergenic |
GATAGCGAGGATGCAAGTGT+TGG | 0.599986 | 6_3:+32356868 | Msa0948320:CDS |
GATGGCAATACCCCACATGA+TGG | 0.601622 | 6_3:-32356784 | None:intergenic |
GATGATGTTTAAGCCTGCAA+GGG | 0.607001 | 6_3:+32357173 | Msa0948320:CDS |
CCTCCTCACCTAGTGATGGG+GGG | 0.608278 | 6_3:+32356262 | Msa0948320:CDS |
TGAGAAAGGATTGGAGAGCA+TGG | 0.612846 | 6_3:+32356478 | Msa0948320:CDS |
GCTACAACAGTGTTGTTCAC+AGG | 0.614063 | 6_3:-32356540 | None:intergenic |
GTGGTTAACTCATTGGCGAA+TGG | 0.617203 | 6_3:-32356718 | None:intergenic |
AGAAGGATCTGGCGATAGCG+AGG | 0.624952 | 6_3:+32356855 | Msa0948320:CDS |
AACCGGACTGAAGTATGAGA+AGG | 0.626830 | 6_3:+32356428 | Msa0948320:CDS |
ACACTTGGGCACCATCATGT+GGG | 0.626839 | 6_3:+32356773 | Msa0948320:CDS |
CACTACATCCTTGAAAAGTG+TGG | 0.627204 | 6_3:-32356737 | None:intergenic |
GGTTAGTCATGAACGGCAGT+GGG | 0.628971 | 6_3:-32357263 | None:intergenic |
AAAACTGATGGTCAAAAGAG+TGG | 0.632803 | 6_3:+32356934 | Msa0948320:CDS |
TTGTAGCACCTGATGAGTGG+TGG | 0.632872 | 6_3:+32356556 | Msa0948320:CDS |
TCACACAGGTTAGTCATGAA+CGG | 0.640237 | 6_3:-32357270 | None:intergenic |
CCATTACATCCTAGTCACAC+AGG | 0.643132 | 6_3:-32357284 | None:intergenic |
GAGAGAAACTGGATTAGGGT+GGG | 0.643865 | 6_3:+32356515 | Msa0948320:CDS |
GTCTCCAAGGGAGAACGTGT+TGG | 0.644338 | 6_3:+32356351 | Msa0948320:CDS |
CACTTGGGCACCATCATGTG+GGG | 0.646121 | 6_3:+32356774 | Msa0948320:CDS |
TGTTTGGAGCAAGTCTCCAA+GGG | 0.647436 | 6_3:+32356339 | Msa0948320:CDS |
TGTAGCACCTGATGAGTGGT+GGG | 0.651018 | 6_3:+32356557 | Msa0948320:CDS |
GATGGCTGACCTTCACACCA+TGG | 0.672139 | 6_3:+32357104 | Msa0948320:CDS |
GGCTAATGGAGAGTACACTT+GGG | 0.684848 | 6_3:+32356759 | Msa0948320:CDS |
CTGTTGTAGCACCTGATGAG+TGG | 0.705267 | 6_3:+32356553 | Msa0948320:CDS |
GAGATGTTTATTTCCCTACG+AGG | 0.736446 | 6_3:+32357195 | Msa0948320:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TCCTAAATTTTTCATAAAGA+GGG | - | chr6_3:32356687-32356706 | None:intergenic | 20.0% |
!!! | TTCCTAAATTTTTCATAAAG+AGG | - | chr6_3:32356688-32356707 | None:intergenic | 20.0% |
!! | TTATGAAAAATTTAGGAACA+AGG | + | chr6_3:32356690-32356709 | Msa0948320:CDS | 20.0% |
!! | TATGAAAAATTTAGGAACAA+GGG | + | chr6_3:32356691-32356710 | Msa0948320:CDS | 20.0% |
!!! | TCCTAAATTTTTCATAAAGA+GGG | - | chr6_3:32356687-32356706 | None:intergenic | 20.0% |
!!! | TTCCTAAATTTTTCATAAAG+AGG | - | chr6_3:32356688-32356707 | None:intergenic | 20.0% |
!! | TTATGAAAAATTTAGGAACA+AGG | + | chr6_3:32356690-32356709 | Msa0948320:CDS | 20.0% |
!! | TATGAAAAATTTAGGAACAA+GGG | + | chr6_3:32356691-32356710 | Msa0948320:CDS | 20.0% |
! | AATACCAAGAAAAATGTTGT+GGG | + | chr6_3:32356237-32356256 | Msa0948320:CDS | 25.0% |
! | ACCCTCTTTATGAAAAATTT+AGG | + | chr6_3:32356683-32356702 | Msa0948320:CDS | 25.0% |
! | ATGAAAAATTTAGGAACAAG+GGG | + | chr6_3:32356692-32356711 | Msa0948320:CDS | 25.0% |
! | ACAACTGAATTTGGAAATAT+TGG | + | chr6_3:32356895-32356914 | Msa0948320:CDS | 25.0% |
! | CAACTGAATTTGGAAATATT+GGG | + | chr6_3:32356896-32356915 | Msa0948320:CDS | 25.0% |
! | AATTCTTCACAAAAAACTGA+TGG | + | chr6_3:32356922-32356941 | Msa0948320:CDS | 25.0% |
! | AATACCAAGAAAAATGTTGT+GGG | + | chr6_3:32356237-32356256 | Msa0948320:CDS | 25.0% |
! | ACCCTCTTTATGAAAAATTT+AGG | + | chr6_3:32356683-32356702 | Msa0948320:CDS | 25.0% |
! | ATGAAAAATTTAGGAACAAG+GGG | + | chr6_3:32356692-32356711 | Msa0948320:CDS | 25.0% |
! | ACAACTGAATTTGGAAATAT+TGG | + | chr6_3:32356895-32356914 | Msa0948320:CDS | 25.0% |
! | CAACTGAATTTGGAAATATT+GGG | + | chr6_3:32356896-32356915 | Msa0948320:CDS | 25.0% |
! | AATTCTTCACAAAAAACTGA+TGG | + | chr6_3:32356922-32356941 | Msa0948320:CDS | 25.0% |
GAATACCAAGAAAAATGTTG+TGG | + | chr6_3:32356236-32356255 | Msa0948320:CDS | 30.0% | |
GCAGAAAACAAAAGCTATTT+GGG | + | chr6_3:32356284-32356303 | Msa0948320:CDS | 30.0% | |
! | AAACTTTGTGAAAGCATGTT+TGG | + | chr6_3:32356323-32356342 | Msa0948320:CDS | 30.0% |
GTCCGATTTCATAATTTAAC+CGG | + | chr6_3:32356411-32356430 | Msa0948320:CDS | 30.0% | |
GTCCGGTTAAATTATGAAAT+CGG | - | chr6_3:32356416-32356435 | None:intergenic | 30.0% | |
AGAGCATGGTATAACTTATT+TGG | + | chr6_3:32356492-32356511 | Msa0948320:CDS | 30.0% | |
GAGCATGGTATAACTTATTT+GGG | + | chr6_3:32356493-32356512 | Msa0948320:CDS | 30.0% | |
TGTATTACATACCAGTTGTT+TGG | - | chr6_3:32356586-32356605 | None:intergenic | 30.0% | |
AACACGAGTATACATATCTA+AGG | - | chr6_3:32356629-32356648 | None:intergenic | 30.0% | |
! | TCATCATTTTCAAACACAGA+TGG | - | chr6_3:32356805-32356824 | None:intergenic | 30.0% |
! | TGATAATGATGATGATGATG+AGG | + | chr6_3:32356822-32356841 | Msa0948320:CDS | 30.0% |
! | ATGATCTTTATTTGCATGCT+CGG | + | chr6_3:32357139-32357158 | Msa0948320:CDS | 30.0% |
GAATACCAAGAAAAATGTTG+TGG | + | chr6_3:32356236-32356255 | Msa0948320:CDS | 30.0% | |
GCAGAAAACAAAAGCTATTT+GGG | + | chr6_3:32356284-32356303 | Msa0948320:CDS | 30.0% | |
! | AAACTTTGTGAAAGCATGTT+TGG | + | chr6_3:32356323-32356342 | Msa0948320:CDS | 30.0% |
GTCCGATTTCATAATTTAAC+CGG | + | chr6_3:32356411-32356430 | Msa0948320:CDS | 30.0% | |
GTCCGGTTAAATTATGAAAT+CGG | - | chr6_3:32356416-32356435 | None:intergenic | 30.0% | |
AGAGCATGGTATAACTTATT+TGG | + | chr6_3:32356492-32356511 | Msa0948320:CDS | 30.0% | |
GAGCATGGTATAACTTATTT+GGG | + | chr6_3:32356493-32356512 | Msa0948320:CDS | 30.0% | |
TGTATTACATACCAGTTGTT+TGG | - | chr6_3:32356586-32356605 | None:intergenic | 30.0% | |
AACACGAGTATACATATCTA+AGG | - | chr6_3:32356629-32356648 | None:intergenic | 30.0% | |
! | TCATCATTTTCAAACACAGA+TGG | - | chr6_3:32356805-32356824 | None:intergenic | 30.0% |
! | TGATAATGATGATGATGATG+AGG | + | chr6_3:32356822-32356841 | Msa0948320:CDS | 30.0% |
! | ATGATCTTTATTTGCATGCT+CGG | + | chr6_3:32357139-32357158 | Msa0948320:CDS | 30.0% |
GGCAGAAAACAAAAGCTATT+TGG | + | chr6_3:32356283-32356302 | Msa0948320:CDS | 35.0% | |
! | GTACGAGCTTTTCAAAAGAA+GGG | + | chr6_3:32356373-32356392 | Msa0948320:CDS | 35.0% |
AAGAAGGGTGGACAAATATT+AGG | + | chr6_3:32356388-32356407 | Msa0948320:CDS | 35.0% | |
AGAAGGGTGGACAAATATTA+GGG | + | chr6_3:32356389-32356408 | Msa0948320:CDS | 35.0% | |
AGAAGGCTCAACTAAAGAAT+AGG | + | chr6_3:32356445-32356464 | Msa0948320:CDS | 35.0% | |
AACTTATTTGGGAGAGAAAC+TGG | + | chr6_3:32356504-32356523 | Msa0948320:CDS | 35.0% | |
GATGTGAGTTATGAAAATGC+AGG | + | chr6_3:32356657-32356676 | Msa0948320:intron | 35.0% | |
! | GAAAAGTGTGGTTAACTCAT+TGG | - | chr6_3:32356728-32356747 | None:intergenic | 35.0% |
! | TGAGTTAACCACACTTTTCA+AGG | + | chr6_3:32356729-32356748 | Msa0948320:CDS | 35.0% |
AAAACTGATGGTCAAAAGAG+TGG | + | chr6_3:32356934-32356953 | Msa0948320:CDS | 35.0% | |
!!! | GCACTTGCTTTTTTCTTACT+TGG | - | chr6_3:32356994-32357013 | None:intergenic | 35.0% |
! | ATCATTTGAGACTTCATCCA+TGG | - | chr6_3:32357124-32357143 | None:intergenic | 35.0% |
GGCAGAAAACAAAAGCTATT+TGG | + | chr6_3:32356283-32356302 | Msa0948320:CDS | 35.0% | |
! | GTACGAGCTTTTCAAAAGAA+GGG | + | chr6_3:32356373-32356392 | Msa0948320:CDS | 35.0% |
AAGAAGGGTGGACAAATATT+AGG | + | chr6_3:32356388-32356407 | Msa0948320:CDS | 35.0% | |
AGAAGGGTGGACAAATATTA+GGG | + | chr6_3:32356389-32356408 | Msa0948320:CDS | 35.0% | |
AGAAGGCTCAACTAAAGAAT+AGG | + | chr6_3:32356445-32356464 | Msa0948320:CDS | 35.0% | |
AACTTATTTGGGAGAGAAAC+TGG | + | chr6_3:32356504-32356523 | Msa0948320:CDS | 35.0% | |
GATGTGAGTTATGAAAATGC+AGG | + | chr6_3:32356657-32356676 | Msa0948320:intron | 35.0% | |
! | GAAAAGTGTGGTTAACTCAT+TGG | - | chr6_3:32356728-32356747 | None:intergenic | 35.0% |
! | TGAGTTAACCACACTTTTCA+AGG | + | chr6_3:32356729-32356748 | Msa0948320:CDS | 35.0% |
AAAACTGATGGTCAAAAGAG+TGG | + | chr6_3:32356934-32356953 | Msa0948320:CDS | 35.0% | |
!!! | GCACTTGCTTTTTTCTTACT+TGG | - | chr6_3:32356994-32357013 | None:intergenic | 35.0% |
! | ATCATTTGAGACTTCATCCA+TGG | - | chr6_3:32357124-32357143 | None:intergenic | 35.0% |
! | GGAACCCACAACATTTTTCT+TGG | - | chr6_3:32356244-32356263 | None:intergenic | 40.0% |
! | GGTACGAGCTTTTCAAAAGA+AGG | + | chr6_3:32356372-32356391 | Msa0948320:CDS | 40.0% |
TAGGTATGACAGTCTGAGAA+AGG | + | chr6_3:32356464-32356483 | Msa0948320:CDS | 40.0% | |
ATGACAGTCTGAGAAAGGAT+TGG | + | chr6_3:32356469-32356488 | Msa0948320:CDS | 40.0% | |
TTTGGGAGAGAAACTGGATT+AGG | + | chr6_3:32356510-32356529 | Msa0948320:CDS | 40.0% | |
TTGGGAGAGAAACTGGATTA+GGG | + | chr6_3:32356511-32356530 | Msa0948320:CDS | 40.0% | |
CACTACATCCTTGAAAAGTG+TGG | - | chr6_3:32356740-32356759 | None:intergenic | 40.0% | |
!! | CACACTTTTCAAGGATGTAG+TGG | + | chr6_3:32356738-32356757 | Msa0948320:CDS | 40.0% |
TTCAAGGATGTAGTGGCTAA+TGG | + | chr6_3:32356745-32356764 | Msa0948320:CDS | 40.0% | |
GTTGGAGCAACAACTGAATT+TGG | + | chr6_3:32356886-32356905 | Msa0948320:CDS | 40.0% | |
TGCATCTATTGGTGAAGTGA+TGG | + | chr6_3:32357086-32357105 | Msa0948320:CDS | 40.0% | |
! | TGATGATGTTTAAGCCTGCA+AGG | + | chr6_3:32357172-32357191 | Msa0948320:CDS | 40.0% |
GATGATGTTTAAGCCTGCAA+GGG | + | chr6_3:32357173-32357192 | Msa0948320:CDS | 40.0% | |
GAAATAAACATCTCCCTTGC+AGG | - | chr6_3:32357189-32357208 | None:intergenic | 40.0% | |
GAGATGTTTATTTCCCTACG+AGG | + | chr6_3:32357195-32357214 | Msa0948320:CDS | 40.0% | |
! | TCACACAGGTTAGTCATGAA+CGG | - | chr6_3:32357273-32357292 | None:intergenic | 40.0% |
! | GGAACCCACAACATTTTTCT+TGG | - | chr6_3:32356244-32356263 | None:intergenic | 40.0% |
! | GGTACGAGCTTTTCAAAAGA+AGG | + | chr6_3:32356372-32356391 | Msa0948320:CDS | 40.0% |
TAGGTATGACAGTCTGAGAA+AGG | + | chr6_3:32356464-32356483 | Msa0948320:CDS | 40.0% | |
ATGACAGTCTGAGAAAGGAT+TGG | + | chr6_3:32356469-32356488 | Msa0948320:CDS | 40.0% | |
TTTGGGAGAGAAACTGGATT+AGG | + | chr6_3:32356510-32356529 | Msa0948320:CDS | 40.0% | |
TTGGGAGAGAAACTGGATTA+GGG | + | chr6_3:32356511-32356530 | Msa0948320:CDS | 40.0% | |
CACTACATCCTTGAAAAGTG+TGG | - | chr6_3:32356740-32356759 | None:intergenic | 40.0% | |
!! | CACACTTTTCAAGGATGTAG+TGG | + | chr6_3:32356738-32356757 | Msa0948320:CDS | 40.0% |
TTCAAGGATGTAGTGGCTAA+TGG | + | chr6_3:32356745-32356764 | Msa0948320:CDS | 40.0% | |
GTTGGAGCAACAACTGAATT+TGG | + | chr6_3:32356886-32356905 | Msa0948320:CDS | 40.0% | |
TGCATCTATTGGTGAAGTGA+TGG | + | chr6_3:32357086-32357105 | Msa0948320:CDS | 40.0% | |
! | TGATGATGTTTAAGCCTGCA+AGG | + | chr6_3:32357172-32357191 | Msa0948320:CDS | 40.0% |
GATGATGTTTAAGCCTGCAA+GGG | + | chr6_3:32357173-32357192 | Msa0948320:CDS | 40.0% | |
GAAATAAACATCTCCCTTGC+AGG | - | chr6_3:32357189-32357208 | None:intergenic | 40.0% | |
GAGATGTTTATTTCCCTACG+AGG | + | chr6_3:32357195-32357214 | Msa0948320:CDS | 40.0% | |
! | TCACACAGGTTAGTCATGAA+CGG | - | chr6_3:32357273-32357292 | None:intergenic | 40.0% |
! | ATGTTTGGAGCAAGTCTCCA+AGG | + | chr6_3:32356338-32356357 | Msa0948320:CDS | 45.0% |
! | TGTTTGGAGCAAGTCTCCAA+GGG | + | chr6_3:32356339-32356358 | Msa0948320:CDS | 45.0% |
! | CGAGCTTTTCAAAAGAAGGG+TGG | + | chr6_3:32356376-32356395 | Msa0948320:CDS | 45.0% |
AACCGGACTGAAGTATGAGA+AGG | + | chr6_3:32356428-32356447 | Msa0948320:CDS | 45.0% | |
AGCCTTCTCATACTTCAGTC+CGG | - | chr6_3:32356433-32356452 | None:intergenic | 45.0% | |
TGAGAAAGGATTGGAGAGCA+TGG | + | chr6_3:32356478-32356497 | Msa0948320:CDS | 45.0% | |
! | GAGAGAAACTGGATTAGGGT+GGG | + | chr6_3:32356515-32356534 | Msa0948320:CDS | 45.0% |
! | GCTACAACAGTGTTGTTCAC+AGG | - | chr6_3:32356543-32356562 | None:intergenic | 45.0% |
GTGGTTAACTCATTGGCGAA+TGG | - | chr6_3:32356721-32356740 | None:intergenic | 45.0% | |
! | TGGCTAATGGAGAGTACACT+TGG | + | chr6_3:32356758-32356777 | Msa0948320:CDS | 45.0% |
! | GGCTAATGGAGAGTACACTT+GGG | + | chr6_3:32356759-32356778 | Msa0948320:CDS | 45.0% |
! | TGATGATGATGATGAGGCAG+TGG | + | chr6_3:32356828-32356847 | Msa0948320:CDS | 45.0% |
GTCAAAAGAGTGGTGAGAAG+AGG | + | chr6_3:32356944-32356963 | Msa0948320:CDS | 45.0% | |
! | GCTGCTGGTAATGCATCTAT+TGG | + | chr6_3:32357075-32357094 | Msa0948320:CDS | 45.0% |
AGACTTCATCCATGGTGTGA+AGG | - | chr6_3:32357116-32357135 | None:intergenic | 45.0% | |
TATTTCCCTACGAGGTTCAG+AGG | + | chr6_3:32357203-32357222 | Msa0948320:CDS | 45.0% | |
CAGAGGAGAAGAGGTTGAAT+TGG | + | chr6_3:32357220-32357239 | Msa0948320:CDS | 45.0% | |
! | ATGTTTGGAGCAAGTCTCCA+AGG | + | chr6_3:32356338-32356357 | Msa0948320:CDS | 45.0% |
! | TGTTTGGAGCAAGTCTCCAA+GGG | + | chr6_3:32356339-32356358 | Msa0948320:CDS | 45.0% |
! | CGAGCTTTTCAAAAGAAGGG+TGG | + | chr6_3:32356376-32356395 | Msa0948320:CDS | 45.0% |
AACCGGACTGAAGTATGAGA+AGG | + | chr6_3:32356428-32356447 | Msa0948320:CDS | 45.0% | |
AGCCTTCTCATACTTCAGTC+CGG | - | chr6_3:32356433-32356452 | None:intergenic | 45.0% | |
TGAGAAAGGATTGGAGAGCA+TGG | + | chr6_3:32356478-32356497 | Msa0948320:CDS | 45.0% | |
! | GAGAGAAACTGGATTAGGGT+GGG | + | chr6_3:32356515-32356534 | Msa0948320:CDS | 45.0% |
! | GCTACAACAGTGTTGTTCAC+AGG | - | chr6_3:32356543-32356562 | None:intergenic | 45.0% |
GTGGTTAACTCATTGGCGAA+TGG | - | chr6_3:32356721-32356740 | None:intergenic | 45.0% | |
! | TGGCTAATGGAGAGTACACT+TGG | + | chr6_3:32356758-32356777 | Msa0948320:CDS | 45.0% |
! | GGCTAATGGAGAGTACACTT+GGG | + | chr6_3:32356759-32356778 | Msa0948320:CDS | 45.0% |
! | TGATGATGATGATGAGGCAG+TGG | + | chr6_3:32356828-32356847 | Msa0948320:CDS | 45.0% |
GTCAAAAGAGTGGTGAGAAG+AGG | + | chr6_3:32356944-32356963 | Msa0948320:CDS | 45.0% | |
! | GCTGCTGGTAATGCATCTAT+TGG | + | chr6_3:32357075-32357094 | Msa0948320:CDS | 45.0% |
AGACTTCATCCATGGTGTGA+AGG | - | chr6_3:32357116-32357135 | None:intergenic | 45.0% | |
TATTTCCCTACGAGGTTCAG+AGG | + | chr6_3:32357203-32357222 | Msa0948320:CDS | 45.0% | |
CAGAGGAGAAGAGGTTGAAT+TGG | + | chr6_3:32357220-32357239 | Msa0948320:CDS | 45.0% | |
GTTCCTCCTCACCTAGTGAT+GGG | + | chr6_3:32356259-32356278 | Msa0948320:CDS | 50.0% | |
TTCCTCCTCACCTAGTGATG+GGG | + | chr6_3:32356260-32356279 | Msa0948320:CDS | 50.0% | |
! | GGAGAGAAACTGGATTAGGG+TGG | + | chr6_3:32356514-32356533 | Msa0948320:CDS | 50.0% |
CTGTTGTAGCACCTGATGAG+TGG | + | chr6_3:32356553-32356572 | Msa0948320:CDS | 50.0% | |
TTGTAGCACCTGATGAGTGG+TGG | + | chr6_3:32356556-32356575 | Msa0948320:CDS | 50.0% | |
TGTAGCACCTGATGAGTGGT+GGG | + | chr6_3:32356557-32356576 | Msa0948320:CDS | 50.0% | |
TACACTTGGGCACCATCATG+TGG | + | chr6_3:32356772-32356791 | Msa0948320:CDS | 50.0% | |
ACACTTGGGCACCATCATGT+GGG | + | chr6_3:32356773-32356792 | Msa0948320:CDS | 50.0% | |
GATGGCAATACCCCACATGA+TGG | - | chr6_3:32356787-32356806 | None:intergenic | 50.0% | |
GATAGCGAGGATGCAAGTGT+TGG | + | chr6_3:32356868-32356887 | Msa0948320:CDS | 50.0% | |
CTTCTCCTCTGAACCTCGTA+GGG | - | chr6_3:32357211-32357230 | None:intergenic | 50.0% | |
TCTTCTCCTCTGAACCTCGT+AGG | - | chr6_3:32357212-32357231 | None:intergenic | 50.0% | |
TACGAGGTTCAGAGGAGAAG+AGG | + | chr6_3:32357211-32357230 | Msa0948320:CDS | 50.0% | |
! | GGTTAGTCATGAACGGCAGT+GGG | - | chr6_3:32357266-32357285 | None:intergenic | 50.0% |
! | AGGTTAGTCATGAACGGCAG+TGG | - | chr6_3:32357267-32357286 | None:intergenic | 50.0% |
GTTCCTCCTCACCTAGTGAT+GGG | + | chr6_3:32356259-32356278 | Msa0948320:CDS | 50.0% | |
TTCCTCCTCACCTAGTGATG+GGG | + | chr6_3:32356260-32356279 | Msa0948320:CDS | 50.0% | |
! | GGAGAGAAACTGGATTAGGG+TGG | + | chr6_3:32356514-32356533 | Msa0948320:CDS | 50.0% |
CTGTTGTAGCACCTGATGAG+TGG | + | chr6_3:32356553-32356572 | Msa0948320:CDS | 50.0% | |
TTGTAGCACCTGATGAGTGG+TGG | + | chr6_3:32356556-32356575 | Msa0948320:CDS | 50.0% | |
TGTAGCACCTGATGAGTGGT+GGG | + | chr6_3:32356557-32356576 | Msa0948320:CDS | 50.0% | |
TACACTTGGGCACCATCATG+TGG | + | chr6_3:32356772-32356791 | Msa0948320:CDS | 50.0% | |
ACACTTGGGCACCATCATGT+GGG | + | chr6_3:32356773-32356792 | Msa0948320:CDS | 50.0% | |
GATGGCAATACCCCACATGA+TGG | - | chr6_3:32356787-32356806 | None:intergenic | 50.0% | |
GATAGCGAGGATGCAAGTGT+TGG | + | chr6_3:32356868-32356887 | Msa0948320:CDS | 50.0% | |
CTTCTCCTCTGAACCTCGTA+GGG | - | chr6_3:32357211-32357230 | None:intergenic | 50.0% | |
TCTTCTCCTCTGAACCTCGT+AGG | - | chr6_3:32357212-32357231 | None:intergenic | 50.0% | |
TACGAGGTTCAGAGGAGAAG+AGG | + | chr6_3:32357211-32357230 | Msa0948320:CDS | 50.0% | |
! | GGTTAGTCATGAACGGCAGT+GGG | - | chr6_3:32357266-32357285 | None:intergenic | 50.0% |
! | AGGTTAGTCATGAACGGCAG+TGG | - | chr6_3:32357267-32357286 | None:intergenic | 50.0% |
GGTTCCTCCTCACCTAGTGA+TGG | + | chr6_3:32356258-32356277 | Msa0948320:CDS | 55.0% | |
TCCTCCTCACCTAGTGATGG+GGG | + | chr6_3:32356261-32356280 | Msa0948320:CDS | 55.0% | |
! | GTTTTCTGCCCCCCATCACT+AGG | - | chr6_3:32356273-32356292 | None:intergenic | 55.0% |
GTCTCCAAGGGAGAACGTGT+TGG | + | chr6_3:32356351-32356370 | Msa0948320:CDS | 55.0% | |
CGTACCAACACGTTCTCCCT+TGG | - | chr6_3:32356358-32356377 | None:intergenic | 55.0% | |
TTGGTCTCCCACCACTCATC+AGG | - | chr6_3:32356567-32356586 | None:intergenic | 55.0% | |
! | GTGGTGGGAGACCAAACAAC+TGG | + | chr6_3:32356572-32356591 | Msa0948320:CDS | 55.0% |
CACTTGGGCACCATCATGTG+GGG | + | chr6_3:32356774-32356793 | Msa0948320:CDS | 55.0% | |
GATGAGGCAGTGGCTGTAGA+AGG | + | chr6_3:32356838-32356857 | Msa0948320:CDS | 55.0% | |
GCAGTGGCTGTAGAAGGATC+TGG | + | chr6_3:32356844-32356863 | Msa0948320:CDS | 55.0% | |
AGAAGGATCTGGCGATAGCG+AGG | + | chr6_3:32356855-32356874 | Msa0948320:CDS | 55.0% | |
CGTTCTCGCAATGATGCTGC+TGG | + | chr6_3:32357060-32357079 | Msa0948320:CDS | 55.0% | |
GATGGCTGACCTTCACACCA+TGG | + | chr6_3:32357104-32357123 | Msa0948320:CDS | 55.0% | |
GGTTCCTCCTCACCTAGTGA+TGG | + | chr6_3:32356258-32356277 | Msa0948320:CDS | 55.0% | |
TCCTCCTCACCTAGTGATGG+GGG | + | chr6_3:32356261-32356280 | Msa0948320:CDS | 55.0% | |
! | GTTTTCTGCCCCCCATCACT+AGG | - | chr6_3:32356273-32356292 | None:intergenic | 55.0% |
GTCTCCAAGGGAGAACGTGT+TGG | + | chr6_3:32356351-32356370 | Msa0948320:CDS | 55.0% | |
CGTACCAACACGTTCTCCCT+TGG | - | chr6_3:32356358-32356377 | None:intergenic | 55.0% | |
TTGGTCTCCCACCACTCATC+AGG | - | chr6_3:32356567-32356586 | None:intergenic | 55.0% | |
! | GTGGTGGGAGACCAAACAAC+TGG | + | chr6_3:32356572-32356591 | Msa0948320:CDS | 55.0% |
CACTTGGGCACCATCATGTG+GGG | + | chr6_3:32356774-32356793 | Msa0948320:CDS | 55.0% | |
GATGAGGCAGTGGCTGTAGA+AGG | + | chr6_3:32356838-32356857 | Msa0948320:CDS | 55.0% | |
GCAGTGGCTGTAGAAGGATC+TGG | + | chr6_3:32356844-32356863 | Msa0948320:CDS | 55.0% | |
AGAAGGATCTGGCGATAGCG+AGG | + | chr6_3:32356855-32356874 | Msa0948320:CDS | 55.0% | |
CGTTCTCGCAATGATGCTGC+TGG | + | chr6_3:32357060-32357079 | Msa0948320:CDS | 55.0% | |
GATGGCTGACCTTCACACCA+TGG | + | chr6_3:32357104-32357123 | Msa0948320:CDS | 55.0% | |
! | CCTCCTCACCTAGTGATGGG+GGG | + | chr6_3:32356262-32356281 | Msa0948320:CDS | 60.0% |
! | CCTCCTCACCTAGTGATGGG+GGG | + | chr6_3:32356262-32356281 | Msa0948320:CDS | 60.0% |
CCCCCCATCACTAGGTGAGG+AGG | - | chr6_3:32356265-32356284 | None:intergenic | 65.0% | |
CTGCCCCCCATCACTAGGTG+AGG | - | chr6_3:32356268-32356287 | None:intergenic | 65.0% | |
CCCCCCATCACTAGGTGAGG+AGG | - | chr6_3:32356265-32356284 | None:intergenic | 65.0% | |
CTGCCCCCCATCACTAGGTG+AGG | - | chr6_3:32356268-32356287 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 32356231 | 32357296 | 32356231 | ID=Msa0948320;Name=Msa0948320 |
chr6_3 | mRNA | 32356231 | 32357296 | 32356231 | ID=Msa0948320-mRNA-1;Parent=Msa0948320;Name=Msa0948320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|326 |
chr6_3 | exon | 32356231 | 32356593 | 32356231 | ID=Msa0948320-mRNA-1:exon:8433;Parent=Msa0948320-mRNA-1 |
chr6_3 | exon | 32356679 | 32357296 | 32356679 | ID=Msa0948320-mRNA-1:exon:8434;Parent=Msa0948320-mRNA-1 |
chr6_3 | CDS | 32356231 | 32356593 | 32356231 | ID=Msa0948320-mRNA-1:cds;Parent=Msa0948320-mRNA-1 |
chr6_3 | CDS | 32356679 | 32357296 | 32356679 | ID=Msa0948320-mRNA-1:cds;Parent=Msa0948320-mRNA-1 |
Gene Sequence |
Protein sequence |