AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0215360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0215360 MtrunA17_Chr2g0316251 97.855 1352 29 0 1 1352 1 1352 0.0 2751
Msa0215360 MtrunA17_Chr1g0205451 44.760 458 232 9 726 1173 573 1019 3.09e-117 403
Msa0215360 MtrunA17_Chr1g0185491 39.421 449 260 3 726 1166 776 1220 3.32e-99 350
Msa0215360 MtrunA17_Chr5g0430361 35.887 496 295 11 685 1166 571 1057 6.88e-84 298
Msa0215360 MtrunA17_Chr3g0105291 36.275 408 255 5 762 1166 603 1008 1.81e-80 288
Msa0215360 MtrunA17_Chr7g0270101 35.663 415 248 6 761 1166 383 787 7.40e-76 269
Msa0215360 MtrunA17_Chr5g0407211 34.732 429 244 9 762 1166 3 419 2.23e-72 248
Msa0215360 MtrunA17_Chr3g0134811 32.903 465 242 8 761 1166 338 791 1.07e-71 257
Msa0215360 MtrunA17_Chr5g0407251 34.499 429 245 9 762 1166 3 419 2.25e-71 245
Msa0215360 MtrunA17_Chr3g0134821 36.117 443 260 9 741 1170 404 836 3.03e-67 244
Msa0215360 MtrunA17_Chr7g0259981 36.076 316 177 6 861 1174 8 300 2.50e-60 209
Msa0215360 MtrunA17_Chr3g0134851 30.602 415 198 8 784 1166 108 464 2.41e-45 171
Msa0215360 MtrunA17_Chr1g0182481 29.665 418 223 16 797 1164 495 891 7.86e-45 176
Msa0215360 MtrunA17_Chr4g0055731 26.846 447 236 15 738 1167 98 470 1.27e-36 145
Msa0215360 MtrunA17_Chr7g0265211 26.667 435 231 13 798 1164 531 945 2.92e-35 146
Msa0215360 MtrunA17_Chr1g0179841 25.556 450 235 14 791 1166 379 802 1.52e-31 134
Msa0215360 MtrunA17_Chr4g0028111 24.788 472 238 13 778 1151 121 573 6.61e-29 124
Msa0215360 MtrunA17_Chr4g0025251 31.600 250 152 6 934 1166 454 701 7.18e-24 108
Msa0215360 MtrunA17_Chr4g0027811 24.057 424 210 12 794 1166 216 578 3.30e-22 102
Msa0215360 MtrunA17_Chr2g0320451 36.601 153 94 2 1015 1166 873 1023 1.83e-19 95.1
Msa0215360 MtrunA17_Chr2g0320451 29.237 236 100 9 798 984 500 717 4.79e-18 90.5
Msa0215360 MtrunA17_Chr4g0027391 39.759 83 36 2 850 918 387 469 4.04e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0215360 AT3G14980.5 51.282 585 262 5 595 1176 427 991 0.0 608
Msa0215360 AT3G14980.5 34.375 256 161 5 147 400 74 324 2.31e-35 147
Msa0215360 AT3G14980.6 51.282 585 262 5 595 1176 472 1036 0.0 607
Msa0215360 AT3G14980.6 32.426 404 228 10 1 400 7 369 5.02e-43 172
Msa0215360 AT3G14980.1 51.282 585 262 5 595 1176 472 1036 0.0 607
Msa0215360 AT3G14980.1 32.426 404 228 10 1 400 7 369 5.02e-43 172
Msa0215360 AT3G14980.2 51.282 585 262 5 595 1176 472 1036 0.0 607
Msa0215360 AT3G14980.2 32.426 404 228 10 1 400 7 369 5.02e-43 172
Msa0215360 AT3G14980.3 51.832 573 256 4 595 1167 472 1024 0.0 604
Msa0215360 AT3G14980.3 32.426 404 228 10 1 400 7 369 3.06e-43 172
Msa0215360 AT3G14980.4 47.826 483 232 4 595 1077 472 934 4.71e-143 460
Msa0215360 AT3G14980.4 32.426 404 228 10 1 400 7 369 1.80e-43 172
Msa0215360 AT5G36740.5 35.140 609 359 9 701 1297 489 1073 5.35e-114 387
Msa0215360 AT5G36740.1 35.140 609 359 9 701 1297 489 1073 5.35e-114 387
Msa0215360 AT1G05380.3 42.955 440 240 4 733 1166 491 925 6.10e-112 380
Msa0215360 AT1G05380.1 42.955 440 240 4 733 1166 491 925 6.10e-112 380
Msa0215360 AT1G05380.2 42.955 440 240 4 733 1166 491 925 6.10e-112 380
Msa0215360 AT5G36740.4 34.410 619 360 10 701 1297 336 930 9.31e-111 374
Msa0215360 AT4G14920.2 38.938 452 267 4 730 1177 548 994 1.74e-104 359
Msa0215360 AT4G14920.1 38.938 452 267 4 730 1177 548 994 1.74e-104 359
Msa0215360 AT4G14920.3 38.938 452 267 4 730 1177 548 994 1.91e-104 359
Msa0215360 AT5G36670.4 32.800 625 366 11 701 1297 489 1087 8.87e-101 349
Msa0215360 AT5G36670.5 32.800 625 366 11 701 1297 489 1087 8.87e-101 349
Msa0215360 AT5G36670.3 32.126 635 367 12 701 1297 336 944 1.81e-97 337
Msa0215360 AT5G36670.1 32.126 635 367 12 701 1297 489 1097 1.49e-96 337
Msa0215360 AT5G36670.2 38.107 412 242 5 701 1108 489 891 4.00e-90 313
Msa0215360 AT5G36740.2 38.107 412 242 5 701 1108 489 891 4.00e-90 313
Msa0215360 AT5G36740.3 38.107 412 242 5 701 1108 489 891 4.00e-90 313
Msa0215360 AT5G58610.4 35.835 413 258 4 760 1166 366 777 2.83e-82 290
Msa0215360 AT5G58610.8 35.835 413 258 4 760 1166 597 1008 1.99e-80 287
Msa0215360 AT5G58610.2 35.835 413 258 4 760 1166 597 1008 1.99e-80 287
Msa0215360 AT5G58610.3 35.835 413 258 4 760 1166 597 1008 2.44e-80 288
Msa0215360 AT5G58610.7 35.835 413 258 4 760 1166 588 999 2.63e-80 288
Msa0215360 AT5G58610.5 35.835 413 258 4 760 1166 588 999 2.88e-80 288
Msa0215360 AT5G58610.6 35.922 412 233 7 760 1166 588 973 2.21e-74 270
Msa0215360 AT5G58610.1 35.922 412 233 7 760 1166 588 973 2.24e-74 270
Msa0215360 AT5G58610.10 35.196 358 225 4 760 1111 597 953 1.46e-67 248
Msa0215360 AT5G58610.9 35.196 358 225 4 760 1111 588 944 2.60e-67 247
Msa0215360 AT5G58610.11 34.365 323 205 4 760 1076 588 909 1.68e-56 213
Msa0215360 AT2G37520.1 29.909 438 234 16 798 1181 410 828 6.60e-46 179
Msa0215360 AT3G53680.1 27.990 418 239 12 798 1166 427 831 4.94e-45 177
Msa0215360 AT3G53680.2 27.990 418 239 12 798 1166 429 833 5.37e-45 177
Msa0215360 AT5G63900.1 32.615 325 190 10 864 1181 253 555 3.42e-41 161
Msa0215360 AT2G27980.1 27.294 436 235 11 798 1166 637 1057 1.86e-36 150
Msa0215360 AT2G36720.1 26.328 433 239 14 798 1166 557 973 4.24e-33 139
Msa0215360 AT2G36720.2 26.328 433 239 14 798 1166 557 973 4.24e-33 139
Msa0215360 AT5G22760.2 40.000 80 43 2 844 921 393 469 3.28e-11 68.9
Msa0215360 AT5G22760.1 40.000 80 43 2 844 921 393 469 6.52e-11 67.8
Msa0215360 AT5G22760.3 40.000 80 43 2 844 921 118 194 6.70e-11 67.8

Find 346 sgRNAs with CRISPR-Local

Find 665 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCTTCTATGTTCAGATTT+TGG 0.097676 2_1:-60564770 Msa0215360:five_prime_UTR
AGTCAGAGGCGTGTTATTTC+TGG 0.153312 2_1:-60563358 Msa0215360:CDS
GCAACCTGCAACGGCCTTTA+TGG 0.163393 2_1:+60561262 None:intergenic
TCTTACAAGCTCTGGAAATT+TGG 0.177960 2_1:-60561859 Msa0215360:CDS
ACAGTTCACCCACCAAAATT+AGG 0.181806 2_1:+60564732 None:intergenic
ATTTCGAGAAACCCTAATTT+TGG 0.200841 2_1:-60564744 Msa0215360:five_prime_UTR
TTGAAATATGAAGTGAATTA+AGG 0.204943 2_1:-60564281 Msa0215360:five_prime_UTR
TACATCTAATTCAGATGTTT+TGG 0.213061 2_1:-60563086 Msa0215360:CDS
CGATGATTCTCTACAGTTAT+AGG 0.230936 2_1:-60564136 Msa0215360:intron
TCTTTGTTGGCACTTGTTCT+TGG 0.233184 2_1:+60555839 None:intergenic
GATTTACCTCGGATTATCTT+TGG 0.239558 2_1:+60561330 None:intergenic
CACTTCACAGCTTCTATTAC+TGG 0.240006 2_1:+60563497 None:intergenic
GTATAGTTGCTTCATCTAAA+AGG 0.248528 2_1:-60565004 Msa0215360:five_prime_UTR
GCTCTTAATATACACGTTAT+TGG 0.248661 2_1:-60555597 Msa0215360:three_prime_UTR
CTTACAAACAATACCGTCTT+TGG 0.249129 2_1:+60561068 None:intergenic
AGAGAGAGAAACTCAGAAAA+AGG 0.255905 2_1:-60564911 Msa0215360:five_prime_UTR
TTCATTCATGCATGTAGATT+TGG 0.263833 2_1:-60564607 Msa0215360:five_prime_UTR
TGTATTGCAAACTGCCTTTA+GGG 0.264548 2_1:+60557770 None:intergenic
ATATTCTTATGTAGATTCTT+AGG 0.264639 2_1:-60563678 Msa0215360:five_prime_UTR
CATCATAGAGAACCGATTAA+TGG 0.265767 2_1:-60561979 Msa0215360:CDS
GCCTGTTTGCCGAGCTCTCC+TGG 0.266619 2_1:+60562801 None:intergenic
TTGTATTGCAAACTGCCTTT+AGG 0.269161 2_1:+60557769 None:intergenic
CTTCGACATACATATCTTCT+TGG 0.269910 2_1:+60562015 None:intergenic
CTTCCCATGTGACTTGCATT+TGG 0.275472 2_1:+60564949 None:intergenic
GATCGTCAACCAGGGCATTT+TGG 0.277304 2_1:-60563606 Msa0215360:five_prime_UTR
GGCTTATCAATGGTGGATTA+TGG 0.282618 2_1:-60562339 Msa0215360:CDS
TGCGGGAATTTACAAAAGTT+TGG 0.284793 2_1:-60562517 Msa0215360:CDS
CAGAATTATCTTTAGGGTTT+CGG 0.291247 2_1:+60561112 None:intergenic
TTGTCGGATTTGTGGAAATT+TGG 0.293006 2_1:-60559993 Msa0215360:CDS
TCTCAAACCCCTTGATTTGC+CGG 0.296305 2_1:+60561296 None:intergenic
AGGTTGGAAATTACTACTTT+TGG 0.297926 2_1:+60563049 None:intergenic
ACCCCACCCACCATTATAAA+TGG 0.298016 2_1:+60563533 None:intergenic
TAGTGACAGAATTATCTTTA+GGG 0.301426 2_1:+60561106 None:intergenic
TTAGTGACAGAATTATCTTT+AGG 0.306142 2_1:+60561105 None:intergenic
AGGCATTTCCTCAGTTCTTA+AGG 0.307406 2_1:+60562730 None:intergenic
AGCAGATATTTCTGTGGTTC+TGG 0.307947 2_1:+60562082 None:intergenic
AGTAAAGGGGTGATATAATT+AGG 0.307958 2_1:-60555516 Msa0215360:three_prime_UTR
ATTTGTTTAATTTGAAGTTT+TGG 0.308888 2_1:-60564540 Msa0215360:five_prime_UTR
GGAAGCATCAACGGCCTTCT+AGG 0.311431 2_1:-60562583 Msa0215360:CDS
GGGGATCCTCTTGGTCCAGC+TGG 0.316151 2_1:+60562663 None:intergenic
AGTTTCTAGTAAGGGTAAAA+TGG 0.318918 2_1:-60562231 Msa0215360:CDS
CTCTTTACCTGCTTGTGCAT+TGG 0.321273 2_1:-60561922 Msa0215360:CDS
AGGGTTTCAATCTTCTAATA+TGG 0.322799 2_1:-60562705 Msa0215360:CDS
GTCAGCAATACTCAAGAATA+AGG 0.324948 2_1:-60561361 Msa0215360:CDS
GGTATCAGCCATTCCGGATT+TGG 0.327959 2_1:-60556568 Msa0215360:CDS
TTAAAGTTTGTTAGTTTAGT+TGG 0.333201 2_1:-60564159 Msa0215360:five_prime_UTR
TGCACTAGTCAGCAACAAAA+TGG 0.336556 2_1:-60563470 Msa0215360:exon
CAGTTCACCCACCAAAATTA+GGG 0.345255 2_1:+60564733 None:intergenic
ACGATGTCAGGATGGTCTAT+TGG 0.345468 2_1:-60562605 Msa0215360:CDS
TGTTGAAGAGTCGCAGAAAA+TGG 0.348382 2_1:+60562109 None:intergenic
TCTTTACCTGCTTGTGCATT+GGG 0.350138 2_1:-60561921 Msa0215360:CDS
ATTTACCTCGGATTATCTTT+GGG 0.353678 2_1:+60561331 None:intergenic
TTTGATGTTCTTACAAGCTC+TGG 0.353731 2_1:-60561867 Msa0215360:CDS
TCCACATTGTTTCCTTCAAA+AGG 0.353806 2_1:+60555866 None:intergenic
GTCAGTGAGCAAAAGTAGTA+TGG 0.356687 2_1:-60561952 Msa0215360:CDS
CTAGCCGTTGAAATTGCATT+AGG 0.356729 2_1:-60555941 Msa0215360:CDS
GAGACTTGGACCAAGGGCTT+TGG 0.358747 2_1:-60556543 Msa0215360:CDS
ATCTTCAATATGGCATCTAT+TGG 0.358806 2_1:+60561398 None:intergenic
AATCGGTTCTCTATGATGTT+TGG 0.362911 2_1:+60561984 None:intergenic
TGCCCAGTGGTTTGCCCTAA+AGG 0.364177 2_1:-60557784 Msa0215360:CDS
GGCATTTCCTCAGTTCTTAA+GGG 0.364655 2_1:+60562731 None:intergenic
GCATGTAGATTTGGAGAAAC+TGG 0.366163 2_1:-60564598 Msa0215360:five_prime_UTR
CCTGGCTTGTTTGTCCGCTC+AGG 0.376452 2_1:-60560782 Msa0215360:intron
ATAGATCGTCATCTTCAATA+TGG 0.381281 2_1:+60561388 None:intergenic
TCACTGACATTTCCATTAAT+CGG 0.381706 2_1:+60561967 None:intergenic
CACTTTGCCTCCTTCAAGCT+TGG 0.382263 2_1:-60560942 Msa0215360:CDS
GAGGACAAGAATATCAATAT+AGG 0.382323 2_1:-60555788 Msa0215360:CDS
CGATGTCAGGATGGTCTATT+GGG 0.382324 2_1:-60562604 Msa0215360:CDS
GTTATACCACAGTGACATAC+TGG 0.382734 2_1:-60561610 Msa0215360:CDS
GACTCCATCCACCGCCTAGA+AGG 0.382818 2_1:+60562569 None:intergenic
TGAAATATGAAGTGAATTAA+GGG 0.383209 2_1:-60564280 Msa0215360:five_prime_UTR
CCCCTCTTCCTCACTGCATT+CGG 0.383952 2_1:+60561752 None:intergenic
TTACTTACAGACACCTCCTT+TGG 0.385712 2_1:+60562845 None:intergenic
AGGAACAAGAAGAAGTTATC+AGG 0.389536 2_1:-60561480 Msa0215360:CDS
AGAAAGCTTAAAAGCCATAA+AGG 0.391365 2_1:-60561276 Msa0215360:CDS
TTCTTCACAACAGTGATTGC+TGG 0.393901 2_1:+60562764 None:intergenic
GGATTCATGTTCAAGGTTGA+TGG 0.394367 2_1:+60563333 None:intergenic
CATTTGGATTTGTCTATTTG+TGG 0.395247 2_1:+60564965 None:intergenic
AGATTCAGTGCCATCTTTGT+TGG 0.396173 2_1:+60555826 None:intergenic
TCACATGGGAAGAAAGGATA+TGG 0.397086 2_1:-60564938 Msa0215360:five_prime_UTR
GCCAACATAGCAGCGGTCTC+TGG 0.399885 2_1:+60562359 None:intergenic
AACAAAGATGGCACTGAATC+TGG 0.401221 2_1:-60555824 Msa0215360:CDS
AAAGCCATAAAGGCCGTTGC+AGG 0.401617 2_1:-60561266 Msa0215360:CDS
TTCTCCAAGGCTGAATCAAC+TGG 0.404150 2_1:+60562170 None:intergenic
GATGGGAAGAAGTATTATCT+TGG 0.404793 2_1:-60561201 Msa0215360:CDS
GCTTGTGGTATCAGCCATTC+CGG 0.405683 2_1:-60556574 Msa0215360:CDS
TCACTGTCGGCCCTATTGTC+TGG 0.406621 2_1:+60555986 None:intergenic
TTGTAGCTTAGTTTCTAGTA+AGG 0.414170 2_1:-60562240 Msa0215360:CDS
TGTAAATCTAAAACAGAAGA+TGG 0.414639 2_1:-60562875 Msa0215360:CDS
ATCTAGTCTTTGTTGTTGAT+AGG 0.415463 2_1:-60564317 Msa0215360:five_prime_UTR
CTCAAATTCATTGTCCCAGC+TGG 0.416591 2_1:-60562678 Msa0215360:CDS
AACTGCACTTGTCGGATTTG+TGG 0.417174 2_1:-60560001 Msa0215360:CDS
AGTACATGGTCTTCCTCTAA+TGG 0.417552 2_1:-60561693 Msa0215360:CDS
CCCAGGAGAGCTCGGCAAAC+AGG 0.418100 2_1:-60562802 Msa0215360:CDS
GCATTCCAATGAGACTGCTC+TGG 0.418538 2_1:-60563203 Msa0215360:CDS
TTAGAAGATTGAAACCCTTC+AGG 0.419051 2_1:+60562710 None:intergenic
GCTTGAAGATTTATCAATGC+TGG 0.419910 2_1:-60564365 Msa0215360:five_prime_UTR
GTAATGAAAACTCGGTCATA+TGG 0.420439 2_1:-60563279 Msa0215360:CDS
GCCGAGCTCTCCTGGGATAC+AGG 0.421895 2_1:+60562809 None:intergenic
GGAATTCGTTGTAGCATTGT+TGG 0.422184 2_1:-60564847 Msa0215360:five_prime_UTR
CCACATTGTTTCCTTCAAAA+GGG 0.424436 2_1:+60555867 None:intergenic
AACACTCCTCCATGATTGTA+AGG 0.425031 2_1:+60557733 None:intergenic
TAATGGAGGGAAGCACAATA+TGG 0.426611 2_1:-60561223 Msa0215360:CDS
TATAGTTGCTTCATCTAAAA+GGG 0.428637 2_1:-60565003 Msa0215360:five_prime_UTR
CAGTAACAACCTCTAGTTGT+AGG 0.430117 2_1:+60564249 None:intergenic
GCCATTTATAATGGTGGGTG+GGG 0.430525 2_1:-60563534 Msa0215360:five_prime_UTR
TTATGCGATGATAACTTTGA+AGG 0.431195 2_1:-60563442 Msa0215360:CDS
TTCCGGATTTGGTGGAGACT+TGG 0.432477 2_1:-60556557 Msa0215360:CDS
ATGCAGTACCAGTTGCCATC+GGG 0.435695 2_1:+60560025 None:intergenic
CGAGGCGTCGGCACATTCCT+TGG 0.436112 2_1:+60557079 None:intergenic
CAAAAGAGGAAGCACTTGAA+TGG 0.439006 2_1:+60561886 None:intergenic
AGCTGTTGCCCTTACAATCA+TGG 0.439519 2_1:-60557742 Msa0215360:CDS
AACTCTGCAAATTAGAGAAA+TGG 0.439647 2_1:-60555626 Msa0215360:exon
GAGCTAAATCCGGCAAATCA+AGG 0.439675 2_1:-60561305 Msa0215360:CDS
CTATGTATTGAAGCATAACT+TGG 0.442380 2_1:-60562942 Msa0215360:CDS
TACTTACAGACACCTCCTTT+GGG 0.442900 2_1:+60562846 None:intergenic
ATGGGAAGAAGTATTATCTT+GGG 0.444935 2_1:-60561200 Msa0215360:CDS
CAGGAGCTAGCCATTTATAA+TGG 0.445074 2_1:-60563543 Msa0215360:five_prime_UTR
AGGAGATCCCCGATGGCAAC+TGG 0.446236 2_1:-60560033 Msa0215360:CDS
TAATATCTGTAGCATCTATC+AGG 0.446238 2_1:-60557423 Msa0215360:intron
TGAATTTGTTTACAGTATGC+AGG 0.447480 2_1:-60563562 Msa0215360:five_prime_UTR
GGGAAAGGACTCTCTTGTCC+TGG 0.450075 2_1:-60561179 Msa0215360:CDS
GTCTTTCTTCTTGCCATACA+AGG 0.450585 2_1:+60556434 None:intergenic
TAACTAGCCCAACCTGAGAT+TGG 0.450900 2_1:+60557874 None:intergenic
ACAAAAGTTTGGAGATTATG+TGG 0.451043 2_1:-60562506 Msa0215360:CDS
GTCCAAGTCTCCACCAAATC+CGG 0.451097 2_1:+60556555 None:intergenic
CTCAGTTCTTAAGGGAGACT+CGG 0.453639 2_1:+60562739 None:intergenic
ACACCCCAGAGCAGTCTCAT+TGG 0.454881 2_1:+60563198 None:intergenic
TCGTGCGGGATGTGCGGCGA+GGG 0.459347 2_1:-60560847 Msa0215360:CDS
GAAAGGTCGGTGCTCTGAAA+AGG 0.461188 2_1:-60562286 Msa0215360:CDS
TGCAAGTCACATGGGAAGAA+AGG 0.461243 2_1:-60564944 Msa0215360:five_prime_UTR
TCGTTAATTTCTAGAGGAGC+TGG 0.464051 2_1:-60564636 Msa0215360:five_prime_UTR
ATAAGCACGCATCAGAAAAT+CGG 0.464398 2_1:-60561776 Msa0215360:CDS
CCTCCATTACAAGGATTCCT+TGG 0.464662 2_1:+60561237 None:intergenic
AAATGTATAACTACTACAAA+AGG 0.468270 2_1:+60562314 None:intergenic
AAAGGAGGTGTCTGTAAGTA+AGG 0.469927 2_1:-60562843 Msa0215360:CDS
TTGTGCTTCCCTCCATTACA+AGG 0.472119 2_1:+60561228 None:intergenic
GGGATCAACTATTACTGATC+AGG 0.473332 2_1:-60561589 Msa0215360:CDS
AATCATTGCCGCTAGATGTT+GGG 0.474736 2_1:-60556072 Msa0215360:CDS
AGCTAAATCCGGCAAATCAA+GGG 0.474850 2_1:-60561304 Msa0215360:CDS
TGAAGGAGGCAAAGTGTAAA+GGG 0.475613 2_1:+60560949 None:intergenic
TAATATTGGTCCATTCCTTA+CGG 0.477055 2_1:+60562441 None:intergenic
GAATCATTGCCGCTAGATGT+TGG 0.478167 2_1:-60556073 Msa0215360:CDS
GAATTCGTTGTAGCATTGTT+GGG 0.479396 2_1:-60564846 Msa0215360:five_prime_UTR
AAGATTTATCAATGCTGGCT+TGG 0.482618 2_1:-60564360 Msa0215360:five_prime_UTR
CATTCCAATGAGACTGCTCT+GGG 0.482728 2_1:-60563202 Msa0215360:CDS
GAATCTGAGTTGGGTAGGGT+AGG 0.483807 2_1:-60564687 Msa0215360:five_prime_UTR
AGAAATGAAGATCGTCAACC+AGG 0.484267 2_1:-60563615 Msa0215360:five_prime_UTR
ATCTCTGCTGATTTCACTGT+CGG 0.484434 2_1:+60555973 None:intergenic
TCAGAGTTCAAGATTCATGC+TGG 0.484938 2_1:-60561021 Msa0215360:CDS
CACGATATGAAACTGCAGTA+AGG 0.485144 2_1:+60562637 None:intergenic
CTTGAGAATCTGAGTTGGGT+AGG 0.485842 2_1:-60564692 Msa0215360:five_prime_UTR
TGCTCCAGTTGATTCAGCCT+TGG 0.488276 2_1:-60562174 Msa0215360:CDS
AAATTTGGTCATTGATAAAG+AGG 0.488780 2_1:-60559978 Msa0215360:CDS
TTTGGTGGAGACTTGGACCA+AGG 0.489098 2_1:-60556550 Msa0215360:CDS
CTGCCTTTAGGGCAAACCAC+TGG 0.490234 2_1:+60557781 None:intergenic
ATGAAACTGCAGTAAGGGAC+GGG 0.490288 2_1:+60562643 None:intergenic
TCAATGTTAGATCTAAGAAC+AGG 0.491121 2_1:-60557705 Msa0215360:CDS
TCCTGTATCCCAGGAGAGCT+CGG 0.492443 2_1:-60562810 Msa0215360:CDS
ATTCAGCTGACCAAGCTTGA+AGG 0.493841 2_1:+60560932 None:intergenic
GTGCAGTTGCTTACGATGTC+AGG 0.495290 2_1:-60562617 Msa0215360:CDS
AAAGGTCGGTGCTCTGAAAA+GGG 0.495460 2_1:-60562285 Msa0215360:CDS
TGAGTTGGGTAGGGTAGGAT+TGG 0.495468 2_1:-60564682 Msa0215360:five_prime_UTR
TCTTCACAAGTTAAACTCTC+TGG 0.495860 2_1:+60563172 None:intergenic
GCCGTTGCAGGTTGCTGCCA+AGG 0.496197 2_1:-60561254 Msa0215360:CDS
TATCAATATAGGTGAAGTAA+TGG 0.496309 2_1:-60555777 Msa0215360:CDS
TGTTTGTAAGTGTTGTGGTA+AGG 0.496357 2_1:-60561055 Msa0215360:CDS
ATTTCTTGAGAATCTGAGTT+GGG 0.497647 2_1:-60564696 Msa0215360:five_prime_UTR
GTCCGAATGCAGTGAGGAAG+AGG 0.497959 2_1:-60561754 Msa0215360:CDS
AAAAGAGGAAGCACTTGAAT+GGG 0.498815 2_1:+60561887 None:intergenic
AAGTTGCTGATGGCTTCGCC+TGG 0.499966 2_1:-60557848 Msa0215360:CDS
TTTCACGCTAGCTAATGTTT+AGG 0.501460 2_1:+60555493 None:intergenic
GTACTCTCCAATCTCAGGTT+GGG 0.502494 2_1:-60557881 Msa0215360:CDS
TAAAGATAATTCTGTCACTA+AGG 0.505718 2_1:-60561103 Msa0215360:CDS
AAATGCGGAAGAAGTGCAAA+AGG 0.506972 2_1:-60561656 Msa0215360:CDS
CTAGTTAATCAAGTTGCTGA+TGG 0.508104 2_1:-60557858 Msa0215360:CDS
GATAATTCTGTCACTAAGGA+TGG 0.508843 2_1:-60561099 Msa0215360:CDS
CTATGTTGGCTTATCAATGG+TGG 0.510809 2_1:-60562346 Msa0215360:CDS
GCCAGAGACCGCTGCTATGT+TGG 0.513514 2_1:-60562360 Msa0215360:CDS
AGGTACCTGCTCTGAAGGAA+TGG 0.513613 2_1:-60556104 Msa0215360:CDS
ACAGAGACAAGTAGGTCTTT+CGG 0.513765 2_1:-60555905 Msa0215360:CDS
AAGGAGCTGTTTCAGACACT+TGG 0.514893 2_1:-60559416 Msa0215360:CDS
GTAAGGGACGGGGATCCTCT+TGG 0.515414 2_1:+60562654 None:intergenic
TTGAAGGAGGCAAAGTGTAA+AGG 0.516368 2_1:+60560948 None:intergenic
TTACTTGTTTGCAGAGTGCA+CGG 0.516836 2_1:-60557153 Msa0215360:intron
GGGATCCTCTTGGTCCAGCT+GGG 0.517919 2_1:+60562664 None:intergenic
AGGAAAAGTCAAAATCAAGC+TGG 0.520615 2_1:-60560901 Msa0215360:CDS
ATCTCCTAATGCAATTTCAA+CGG 0.521699 2_1:+60555937 None:intergenic
ATACTGTACTCTCCAATCTC+AGG 0.522025 2_1:-60557886 Msa0215360:CDS
ACATAGCAGCGGTCTCTGGC+TGG 0.522383 2_1:+60562363 None:intergenic
TTTCAGTGCACTCGATAGAT+CGG 0.523254 2_1:+60562406 None:intergenic
AAATGAAATCTGTTCTAACT+TGG 0.524771 2_1:-60555473 Msa0215360:three_prime_UTR
CCTGTTTGCCGAGCTCTCCT+GGG 0.525134 2_1:+60562802 None:intergenic
ACTGCATAAACTGCACTTGT+CGG 0.525485 2_1:-60560009 Msa0215360:CDS
GAAAAGTGCAATGTAACATA+TGG 0.527585 2_1:-60562467 Msa0215360:CDS
ACGGCCTTCTAGGCGGTGGA+TGG 0.528700 2_1:-60562573 Msa0215360:CDS
CATTAATGTCCTCCTCAGGA+TGG 0.529683 2_1:+60563233 None:intergenic
CACATTGTTTCCTTCAAAAG+GGG 0.530459 2_1:+60555868 None:intergenic
GGAGGGAAGCACAATATGGA+TGG 0.532829 2_1:-60561219 Msa0215360:CDS
CTGCCAAGGAATCCTTGTAA+TGG 0.532876 2_1:-60561240 Msa0215360:CDS
ACTGGGCAGAATGAACCTTC+TGG 0.533301 2_1:+60557799 None:intergenic
AGTTGCTTCTCCTGTATCCC+AGG 0.534835 2_1:-60562819 Msa0215360:CDS
AGTCTGTAGCAGCACAAGTC+AGG 0.535090 2_1:+60563029 None:intergenic
AGCCATTTATAATGGTGGGT+GGG 0.536363 2_1:-60563535 Msa0215360:five_prime_UTR
TCATTCTACAAGACACCAAA+GGG 0.537045 2_1:-60562548 Msa0215360:CDS
GTCCTGGTTGATTGAGAATG+AGG 0.538570 2_1:-60561163 Msa0215360:CDS
TATGTCCATTCCTTCAGAGC+AGG 0.538738 2_1:+60556099 None:intergenic
ACAGATGAATCATTCAAAGT+AGG 0.539589 2_1:-60556124 Msa0215360:CDS
TGTAGCTTAGTTTCTAGTAA+GGG 0.540257 2_1:-60562239 Msa0215360:CDS
TGCGGGATGTGCGGCGAGGG+AGG 0.541812 2_1:-60560844 Msa0215360:CDS
AAGAATCAACAGAGACAAGT+AGG 0.542130 2_1:-60555913 Msa0215360:CDS
AGAACAAGTGCCAACAAAGA+TGG 0.542324 2_1:-60555836 Msa0215360:CDS
TTGAGAATCTGAGTTGGGTA+GGG 0.544766 2_1:-60564691 Msa0215360:five_prime_UTR
GCTTGTAAGAACATCAAAAG+AGG 0.544988 2_1:+60561872 None:intergenic
GGTAAATCTAGAGCTAAATC+CGG 0.545226 2_1:-60561315 Msa0215360:CDS
CATATGGAGGCCGTAAGGAA+TGG 0.545990 2_1:-60562451 Msa0215360:CDS
TATGCAGTACCAGTTGCCAT+CGG 0.546058 2_1:+60560024 None:intergenic
AGATATTTCTGTGGTTCTGG+TGG 0.546610 2_1:+60562085 None:intergenic
AAAGTAGGTACCTGCTCTGA+AGG 0.547142 2_1:-60556109 Msa0215360:CDS
AGCTAGCCATTTATAATGGT+GGG 0.549197 2_1:-60563539 Msa0215360:five_prime_UTR
ATCAGCCATTCCGGATTTGG+TGG 0.549329 2_1:-60556565 Msa0215360:CDS
AACGCAGCTACCAACGGAGT+TGG 0.550296 2_1:-60556049 Msa0215360:CDS
TTGGTGGAGACTTGGACCAA+GGG 0.551309 2_1:-60556549 Msa0215360:CDS
GGTCAGCTGAATACAAAGCC+AGG 0.551424 2_1:-60560921 Msa0215360:CDS
TTTCTTCAGCCAAAATGCCC+TGG 0.553764 2_1:+60563597 None:intergenic
ATTGCATTAATGTCCTCCTC+AGG 0.553853 2_1:+60563229 None:intergenic
GAACTGAGGAAATGCCTGAA+GGG 0.554617 2_1:-60562724 Msa0215360:CDS
CAGAGTTCAAGATTCATGCT+GGG 0.555544 2_1:-60561020 Msa0215360:CDS
TCTGCAAATTAGAGAAATGG+TGG 0.558773 2_1:-60555623 Msa0215360:exon
TGTACTCTCCAATCTCAGGT+TGG 0.558790 2_1:-60557882 Msa0215360:CDS
CAATGCACAAGCAGGTAAAG+AGG 0.560004 2_1:+60561923 None:intergenic
TGCTCTGAAAAGGGGAGAAG+AGG 0.562026 2_1:-60562276 Msa0215360:CDS
TACTTGTTTGCAGAGTGCAC+GGG 0.562242 2_1:-60557152 Msa0215360:intron
CTGCTATGTTGGCTTATCAA+TGG 0.562385 2_1:-60562349 Msa0215360:CDS
GATTTCTTGAGAATCTGAGT+TGG 0.563797 2_1:-60564697 Msa0215360:five_prime_UTR
CCAAGGAATCCTTGTAATGG+AGG 0.564973 2_1:-60561237 Msa0215360:CDS
TCCTTGGCAGCAACCTGCAA+CGG 0.568056 2_1:+60561253 None:intergenic
TGCCTTTAGGGCAAACCACT+GGG 0.568420 2_1:+60557782 None:intergenic
AAATCCAAATGCAAGTCACA+TGG 0.571778 2_1:-60564953 Msa0215360:five_prime_UTR
GGTCTATTGGGAAGCATCAA+CGG 0.572145 2_1:-60562592 Msa0215360:CDS
ATCAACGGCCTTCTAGGCGG+TGG 0.573019 2_1:-60562577 Msa0215360:CDS
TGTAGCAGCACAAGTCAGGT+TGG 0.574525 2_1:+60563033 None:intergenic
ATTTAGCTCTAGATTTACCT+CGG 0.576101 2_1:+60561319 None:intergenic
TATGCATCTAAGAAGCGTCC+AGG 0.578923 2_1:+60557830 None:intergenic
AAAATACATTGGAAGTAAAG+GGG 0.579770 2_1:-60555529 Msa0215360:three_prime_UTR
AGAAGTATTATCTTGGGGAA+AGG 0.579920 2_1:-60561194 Msa0215360:CDS
TCCGAATGCAGTGAGGAAGA+GGG 0.582823 2_1:-60561753 Msa0215360:CDS
CCTCTTCGATTGAGCTCACG+AGG 0.585279 2_1:+60557061 None:intergenic
GCAGATGTTAATATCTGTCA+AGG 0.585666 2_1:-60556604 Msa0215360:intron
GGAAAAGTCAAAATCAAGCT+GGG 0.586183 2_1:-60560900 Msa0215360:CDS
ACGATATGAAACTGCAGTAA+GGG 0.588666 2_1:+60562638 None:intergenic
GTAAATCTAAAACAGAAGAT+GGG 0.588848 2_1:-60562874 Msa0215360:CDS
AAGCTCTGGAAATTTGGACT+CGG 0.589561 2_1:-60561853 Msa0215360:CDS
CATAAAAGCAGATATTTCTG+TGG 0.590266 2_1:+60562076 None:intergenic
GTGCTACCCAATGCACAAGC+AGG 0.590716 2_1:+60561915 None:intergenic
AGAACTGAGGAAATGCCTGA+AGG 0.590783 2_1:-60562725 Msa0215360:CDS
TGCAGTCGGTATCGTCGCCA+AGG 0.591449 2_1:-60557096 Msa0215360:CDS
AAGATTTACCCATCCTGAGG+AGG 0.595421 2_1:-60563242 Msa0215360:CDS
ACAAGCCAGGTGAAAAGTAG+AGG 0.596794 2_1:+60560795 None:intergenic
TAGCCATTTATAATGGTGGG+TGG 0.597091 2_1:-60563536 Msa0215360:five_prime_UTR
GGTATTGTTTGTAAGTGTTG+TGG 0.597128 2_1:-60561060 Msa0215360:CDS
GAGCTAGCCATTTATAATGG+TGG 0.598760 2_1:-60563540 Msa0215360:five_prime_UTR
TTCATGAAAAGATTCAAGCA+AGG 0.598939 2_1:+60560982 None:intergenic
GGAGAAAGAGATAAACAAGA+AGG 0.599516 2_1:-60559435 Msa0215360:CDS
ATTAATGTCCTCCTCAGGAT+GGG 0.601005 2_1:+60563234 None:intergenic
ATAGATCACAAGAAATGCCT+CGG 0.601206 2_1:-60559456 Msa0215360:intron
TGACTTAGCACCAACTCCGT+TGG 0.603644 2_1:+60556039 None:intergenic
TGTAACATATGGAGGCCGTA+AGG 0.604720 2_1:-60562456 Msa0215360:CDS
CTCTGATTGCAACTTGCAGT+CGG 0.604744 2_1:-60557110 Msa0215360:CDS
AAGAGTCGCAGAAAATGGCT+TGG 0.606421 2_1:+60562114 None:intergenic
TGGCTCTAGTAATGAAAACT+CGG 0.607891 2_1:-60563287 Msa0215360:CDS
GAGGGAAGCACAATATGGAT+GGG 0.610826 2_1:-60561218 Msa0215360:CDS
CAAGGAATCCTTGTAATGGA+GGG 0.611447 2_1:-60561236 Msa0215360:CDS
GATCAGGTGCAGTCACTGAA+TGG 0.612010 2_1:-60561573 Msa0215360:CDS
TCATGAAAAGATTCAAGCAA+GGG 0.612212 2_1:+60560983 None:intergenic
GATTATGTAGTTGACAGTGT+GGG 0.613261 2_1:-60561510 Msa0215360:CDS
ATGCATACATGATGACCAGA+AGG 0.615544 2_1:-60557814 Msa0215360:CDS
GCTTGTAAACAGACATCTGA+CGG 0.615888 2_1:-60562041 Msa0215360:CDS
CGATTGAGCTCACGAGGCGT+CGG 0.616069 2_1:+60557067 None:intergenic
CGACTGCAAGTTGCAATCAG+AGG 0.616845 2_1:+60557111 None:intergenic
CTTGTTTATCTCTTTCTCCG+AGG 0.619582 2_1:+60559439 None:intergenic
CCTGAGCGGACAAACAAGCC+AGG 0.619982 2_1:+60560782 None:intergenic
GTCATTCTACAAGACACCAA+AGG 0.620823 2_1:-60562549 Msa0215360:CDS
TATGAAACTGCAGTAAGGGA+CGG 0.621118 2_1:+60562642 None:intergenic
TGGGAAGAAGTATTATCTTG+GGG 0.622625 2_1:-60561199 Msa0215360:CDS
TTCAAGATTTACCCATCCTG+AGG 0.623508 2_1:-60563245 Msa0215360:CDS
AGAGGGGAGGAAAATCTCAA+TGG 0.625624 2_1:-60561736 Msa0215360:CDS
AAGTGCAATGTAACATATGG+AGG 0.626670 2_1:-60562464 Msa0215360:CDS
TTATACCACAGTGACATACT+GGG 0.629773 2_1:-60561609 Msa0215360:CDS
CTGCAAATTAGAGAAATGGT+GGG 0.630174 2_1:-60555622 Msa0215360:exon
AGTCTCCACCAAATCCGGAA+TGG 0.630263 2_1:+60556560 None:intergenic
AATCAGAGGCATCTCTGCAA+CGG 0.631814 2_1:+60557125 None:intergenic
CCTCGTGAGCTCAATCGAAG+AGG 0.632766 2_1:-60557061 Msa0215360:intron
AGGTACGAATCCAAAGCCCT+TGG 0.633630 2_1:+60556533 None:intergenic
GTTGGGAACGCAGCTACCAA+CGG 0.634261 2_1:-60556055 Msa0215360:CDS
TGCAGTACCAGTTGCCATCG+GGG 0.634578 2_1:+60560026 None:intergenic
CAAGCCAGGTGAAAAGTAGA+GGG 0.635588 2_1:+60560796 None:intergenic
TAAGTCAGAGTGTGAGCCTG+TGG 0.635910 2_1:-60556023 Msa0215360:CDS
CCCCAATTGAATAAAACTTG+GGG 0.636059 2_1:+60557669 None:intergenic
CAGCTGACCAAGCTTGAAGG+AGG 0.636561 2_1:+60560935 None:intergenic
GAGATTACACCTACAACTAG+AGG 0.638520 2_1:-60564258 Msa0215360:five_prime_UTR
GACAGAAATGATGATTCGTG+CGG 0.639414 2_1:-60560862 Msa0215360:CDS
ACACTCCTCCATGATTGTAA+GGG 0.641759 2_1:+60557734 None:intergenic
ATTGTCCCAGCTGGACCAAG+AGG 0.642028 2_1:-60562669 Msa0215360:CDS
GAAATGAAGATCGTCAACCA+GGG 0.642148 2_1:-60563614 Msa0215360:five_prime_UTR
TCACTGTGGTATAACATACT+CGG 0.642929 2_1:+60561618 None:intergenic
TTCAACCCAAAGATAATCCG+AGG 0.645039 2_1:-60561336 Msa0215360:CDS
GCTGCGTTCCCAACATCTAG+CGG 0.645233 2_1:+60556064 None:intergenic
CCGAATGCAGTGAGGAAGAG+GGG 0.646708 2_1:-60561752 Msa0215360:CDS
GATGATTCGTGCGGGATGTG+CGG 0.647353 2_1:-60560853 Msa0215360:CDS
GTACATCAGGAGATCCCCGA+TGG 0.647931 2_1:-60560040 Msa0215360:intron
GGCTTTGGATTCGTACCTGT+AGG 0.648737 2_1:-60556528 Msa0215360:CDS
AGTTGCTTACGATGTCAGGA+TGG 0.648897 2_1:-60562613 Msa0215360:CDS
GATGGCAAGATCACCAAAGA+CGG 0.649596 2_1:-60561081 Msa0215360:CDS
CGAGTCTCCCTTAAGAACTG+AGG 0.650233 2_1:-60562738 Msa0215360:CDS
TGAAACTGCAGTAAGGGACG+GGG 0.651622 2_1:+60562644 None:intergenic
AGAAGGTTCATTCTGCCCAG+TGG 0.652269 2_1:-60557797 Msa0215360:CDS
AGATGGGAACATCCCAAAGG+AGG 0.652411 2_1:-60562858 Msa0215360:CDS
AAAGATGGCACTGAATCTGG+TGG 0.653852 2_1:-60555821 Msa0215360:CDS
AATCCAAATGCAAGTCACAT+GGG 0.654688 2_1:-60564952 Msa0215360:five_prime_UTR
ATGGGTAAATCTTGAAGACG+AGG 0.655489 2_1:+60563252 None:intergenic
ACAGAAATGATGATTCGTGC+GGG 0.656042 2_1:-60560861 Msa0215360:CDS
AGTGTGAGACGTATTCTCCA+AGG 0.656359 2_1:+60562157 None:intergenic
TTCGTGCGGGATGTGCGGCG+AGG 0.656575 2_1:-60560848 Msa0215360:CDS
TTGTAGTCAAAGTTGTCGGG+AGG 0.657809 2_1:-60559391 Msa0215360:intron
GCTAAATCCGGCAAATCAAG+GGG 0.658194 2_1:-60561303 Msa0215360:CDS
GACCTCATTCTCAATCAACC+AGG 0.658446 2_1:+60561161 None:intergenic
AGCATCAACGGCCTTCTAGG+CGG 0.659757 2_1:-60562580 Msa0215360:CDS
AAGGTCGGTGCTCTGAAAAG+GGG 0.660345 2_1:-60562284 Msa0215360:CDS
AGATTATGTAGTTGACAGTG+TGG 0.662266 2_1:-60561511 Msa0215360:CDS
TGTCAAGGTAGAAAAGCTTG+TGG 0.662950 2_1:-60556589 Msa0215360:CDS
TCACTGAATGGTGATGTATG+TGG 0.664461 2_1:-60561561 Msa0215360:CDS
ATGTGGCACTCAGACTGTGT+TGG 0.664733 2_1:-60561544 Msa0215360:CDS
ATAAAACTTGGGGTATCATG+TGG 0.677341 2_1:+60557679 None:intergenic
TCTGAATTAGATGTACTACA+AGG 0.677714 2_1:+60563094 None:intergenic
AATGCAGTGAGGAAGAGGGG+AGG 0.683933 2_1:-60561749 Msa0215360:CDS
TATGGCAAGAAGAAAGACGA+AGG 0.691335 2_1:-60556429 Msa0215360:intron
AGAAGATGGGAACATCCCAA+AGG 0.696645 2_1:-60562861 Msa0215360:CDS
TTGATAAGCCAACATAGCAG+CGG 0.700445 2_1:+60562352 None:intergenic
TGGGTAAATCTTGAAGACGA+GGG 0.705584 2_1:+60563253 None:intergenic
AAATCGGTCCGAATGCAGTG+AGG 0.724403 2_1:-60561760 Msa0215360:CDS
CCGAGTGCAACTGACCTGAG+CGG 0.727239 2_1:+60560768 None:intergenic
TTGATCCCAGTATGTCACTG+TGG 0.739707 2_1:+60561604 None:intergenic
ACAGTTGAATCATCTAAACA+CGG 0.740344 2_1:-60562980 Msa0215360:CDS
ATTCCAATGAGACTGCTCTG+GGG 0.741647 2_1:-60563201 Msa0215360:CDS
TGTTGCCCTTACAATCATGG+AGG 0.746862 2_1:-60557739 Msa0215360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAATTTAAAGAAATAAA+TGG - chr2_1:60556333-60556352 Msa0215360:intron 10.0%
!!! ATATATTATTTTACATGAAA+TGG + chr2_1:60556527-60556546 None:intergenic 10.0%
!!! ATTTGTTTAATTTGAAGTTT+TGG - chr2_1:60555886-60555905 Msa0215360:CDS 15.0%
!! TAGAATTATTATAATGCTAA+TGG - chr2_1:60560652-60560671 Msa0215360:intron 15.0%
!!! ATCATAAATGGTTTTATATA+AGG - chr2_1:60561662-60561681 Msa0215360:CDS 15.0%
!! ATAAAACAGAAGAAAAAAAA+TGG + chr2_1:60562200-60562219 None:intergenic 15.0%
!! AATAATATTATTAAACAACG+TGG - chr2_1:60562223-60562242 Msa0215360:CDS 15.0%
!! ATAATATTATTAAACAACGT+GGG - chr2_1:60562224-60562243 Msa0215360:CDS 15.0%
!!! TGTTATGTTTGAATAAATTT+TGG + chr2_1:60563418-60563437 None:intergenic 15.0%
!! ATAATTATTCTTATGAACAA+GGG + chr2_1:60563485-60563504 None:intergenic 15.0%
!! AATAATTATTCTTATGAACA+AGG + chr2_1:60563486-60563505 None:intergenic 15.0%
!!! TTATTCTTTGAAATTTGATA+TGG - chr2_1:60563501-60563520 Msa0215360:five_prime_UTR 15.0%
!!! AAACAATGATTTTTATTTAC+TGG + chr2_1:60564241-60564260 None:intergenic 15.0%
!!! TTTCATAAAGCTATTTTTTG+AGG - chr2_1:60555606-60555625 Msa0215360:three_prime_UTR 20.0%
!!! ATTTTTTCGTTAATTTCTAG+AGG - chr2_1:60555784-60555803 Msa0215360:CDS 20.0%
!!! ATATGATTTTTGTTGCTTAT+TGG - chr2_1:60556029-60556048 Msa0215360:CDS 20.0%
!! TTGAAATATGAAGTGAATTA+AGG - chr2_1:60556145-60556164 Msa0215360:CDS 20.0%
!! TGAAATATGAAGTGAATTAA+GGG - chr2_1:60556146-60556165 Msa0215360:CDS 20.0%
!!! TTAAAGTTTGTTAGTTTAGT+TGG - chr2_1:60556267-60556286 Msa0215360:intron 20.0%
!! TGAAAAACATGAATGAAAAT+TGG - chr2_1:60556375-60556394 Msa0215360:intron 20.0%
!! GAAAAACATGAATGAAAATT+GGG - chr2_1:60556376-60556395 Msa0215360:intron 20.0%
!! ATATTCTTATGTAGATTCTT+AGG - chr2_1:60556748-60556767 Msa0215360:intron 20.0%
!!! TGATTTTATTTGTGTTTACT+TGG - chr2_1:60556782-60556801 Msa0215360:intron 20.0%
!!! GATTTTATTTGTGTTTACTT+GGG - chr2_1:60556783-60556802 Msa0215360:intron 20.0%
!! AAAAACACATTTAAGTCATT+TGG - chr2_1:60557119-60557138 Msa0215360:CDS 20.0%
!! AAATGTATAACTACTACAAA+AGG + chr2_1:60558115-60558134 None:intergenic 20.0%
!!! AGTTATACATTTTGATAGAA+AGG - chr2_1:60558123-60558142 Msa0215360:intron 20.0%
!!! GCATATTCTTCTAAAAAAAA+GGG - chr2_1:60558217-60558236 Msa0215360:intron 20.0%
!!! TTCTAAAAAAAAGGGTAAAA+TGG - chr2_1:60558225-60558244 Msa0215360:intron 20.0%
!! GTATTCTTAAAAAGAAAATG+CGG - chr2_1:60558755-60558774 Msa0215360:intron 20.0%
!!! TAATTTTTCTGCTTTGTAAT+TGG - chr2_1:60559891-60559910 Msa0215360:intron 20.0%
!!! AATTTTTCTGCTTTGTAATT+GGG - chr2_1:60559892-60559911 Msa0215360:intron 20.0%
!!! CAATTAAATTTTTCCATCAT+AGG - chr2_1:60559957-60559976 Msa0215360:CDS 20.0%
!! TTAATTGATATTTGAATGCA+TGG + chr2_1:60560275-60560294 None:intergenic 20.0%
!! TTGTATTGTTTGTATTCTTA+TGG - chr2_1:60560302-60560321 Msa0215360:intron 20.0%
!!! ATGATCAGTTAATTTGATTA+TGG - chr2_1:60560852-60560871 Msa0215360:CDS 20.0%
!!! TATGTTTTAAAAGTACTTGT+AGG - chr2_1:60561250-60561269 Msa0215360:CDS 20.0%
!!! TAAATGGTTTTATATAAGGA+TGG - chr2_1:60561666-60561685 Msa0215360:CDS 20.0%
!! AAGAAAAAAAATGGAACAAA+GGG + chr2_1:60562191-60562210 None:intergenic 20.0%
!! GTTAAAGAAAAACAACTTAA+TGG - chr2_1:60563939-60563958 Msa0215360:intron 20.0%
!!! TTATTTACTGGTTTATGATA+AGG + chr2_1:60564229-60564248 None:intergenic 20.0%
!!! TATTGGTCATTTTTTCTTTT+TGG - chr2_1:60564846-60564865 Msa0215360:five_prime_UTR 20.0%
!!! ATTGGTCATTTTTTCTTTTT+GGG - chr2_1:60564847-60564866 Msa0215360:five_prime_UTR 20.0%
!!! GTATTTTTCTTTTTCTACTT+GGG + chr2_1:60564884-60564903 None:intergenic 20.0%
!!! TGTATTTTTCTTTTTCTACT+TGG + chr2_1:60564885-60564904 None:intergenic 20.0%
!! GTAGAAAAAGAAAAATACAT+TGG - chr2_1:60564886-60564905 Msa0215360:five_prime_UTR 20.0%
!! AAAAATACATTGGAAGTAAA+GGG - chr2_1:60564896-60564915 Msa0215360:five_prime_UTR 20.0%
! TATAGTTGCTTCATCTAAAA+GGG - chr2_1:60555423-60555442 Msa0215360:three_prime_UTR 25.0%
!!! AGTTTGTTTGTTTTCTTCTT+TGG - chr2_1:60555558-60555577 Msa0215360:three_prime_UTR 25.0%
!!! ATAAAGCTATTTTTTGAGGT+GGG - chr2_1:60555610-60555629 Msa0215360:three_prime_UTR 25.0%
!! TTTCTTCTATGTTCAGATTT+TGG - chr2_1:60555656-60555675 Msa0215360:CDS 25.0%
!! TTCTTCTATGTTCAGATTTT+GGG - chr2_1:60555657-60555676 Msa0215360:CDS 25.0%
!! ATTTTCATTTCTGTATTTGC+TGG + chr2_1:60556320-60556339 None:intergenic 25.0%
!!! TTACATACTCTTTTTCAAAG+AGG + chr2_1:60556437-60556456 None:intergenic 25.0%
!! TATGATGATATTGCTTTGAA+TGG - chr2_1:60556604-60556623 Msa0215360:intron 25.0%
! TAGTTCAATGAATGCATTAA+TGG - chr2_1:60556632-60556651 Msa0215360:intron 25.0%
!! AACGAACAATTTCCTTATTT+AGG - chr2_1:60556691-60556710 Msa0215360:intron 25.0%
! TGCATTTAAACACCTAAATA+AGG + chr2_1:60556706-60556725 None:intergenic 25.0%
!! ATTTTTACAGAGGTCTTTTT+TGG - chr2_1:60557026-60557045 Msa0215360:intron 25.0%
!! TACATCTAATTCAGATGTTT+TGG - chr2_1:60557340-60557359 Msa0215360:intron 25.0%
!! ACATCTAATTCAGATGTTTT+GGG - chr2_1:60557341-60557360 Msa0215360:intron 25.0%
!! TGTAAATCTAAAACAGAAGA+TGG - chr2_1:60557551-60557570 Msa0215360:intron 25.0%
!! GTAAATCTAAAACAGAAGAT+GGG - chr2_1:60557552-60557571 Msa0215360:intron 25.0%
!!! ATACATTTTGATAGAAAGGT+CGG - chr2_1:60558127-60558146 Msa0215360:intron 25.0%
!! GGCATATTCTTCTAAAAAAA+AGG - chr2_1:60558216-60558235 Msa0215360:intron 25.0%
!!! CTTTTTAAGAATACCATTAG+AGG + chr2_1:60558749-60558768 None:intergenic 25.0%
! TAGTGACAGAATTATCTTTA+GGG + chr2_1:60559323-60559342 None:intergenic 25.0%
! TTAGTGACAGAATTATCTTT+AGG + chr2_1:60559324-60559343 None:intergenic 25.0%
! TAAAGATAATTCTGTCACTA+AGG - chr2_1:60559323-60559342 Msa0215360:intron 25.0%
! GAAAAATTAAACTATCTCCA+GGG + chr2_1:60559880-60559899 None:intergenic 25.0%
! AGAAAAATTAAACTATCTCC+AGG + chr2_1:60559881-60559900 None:intergenic 25.0%
! AAATTTGGTCATTGATAAAG+AGG - chr2_1:60560448-60560467 Msa0215360:intron 25.0%
! TAAAACGGTTCAAATATTGT+TGG - chr2_1:60560719-60560738 Msa0215360:intron 25.0%
!!! TTGTTGTTTTTTCTGCATAA+AGG - chr2_1:60560747-60560766 Msa0215360:intron 25.0%
! ATGATACCATTTGATTATGA+TGG - chr2_1:60560936-60560955 Msa0215360:CDS 25.0%
! ACAAATCCATCATAATCAAA+TGG + chr2_1:60560945-60560964 None:intergenic 25.0%
! TTCAAGAAACTCAATACAAA+TGG + chr2_1:60561095-60561114 None:intergenic 25.0%
! TGTATTGAGTTTCTTGAATA+TGG - chr2_1:60561097-60561116 Msa0215360:CDS 25.0%
! AGTTTCTTGAATATGGAATA+TGG - chr2_1:60561104-60561123 Msa0215360:CDS 25.0%
!!! TCGTATTCAATACTTTTTGA+AGG - chr2_1:60561215-60561234 Msa0215360:CDS 25.0%
!!! TACTTTTTGAAGGTTATGTT+TGG - chr2_1:60561225-60561244 Msa0215360:CDS 25.0%
!! TTATCTAAAAAGCAACCTTT+TGG + chr2_1:60561337-60561356 None:intergenic 25.0%
! TTAAAATGTTGTCTCTGATA+TGG - chr2_1:60561377-60561396 Msa0215360:CDS 25.0%
!!! TCACTTGTTTTTACTAGAAT+GGG - chr2_1:60561561-60561580 Msa0215360:CDS 25.0%
! GTTATGTGAAAGATCATAAA+TGG - chr2_1:60561650-60561669 Msa0215360:CDS 25.0%
!! TAGCTTTTATCTCTATCTTT+TGG - chr2_1:60561711-60561730 Msa0215360:CDS 25.0%
! TAATCGTTAGACTATTTAAG+TGG - chr2_1:60562079-60562098 Msa0215360:CDS 25.0%
! GAAGAAAAAAAATGGAACAA+AGG + chr2_1:60562192-60562211 None:intergenic 25.0%
!!! TCATTGGTGTTATTTAATCA+AGG - chr2_1:60562489-60562508 Msa0215360:CDS 25.0%
! TTAAATGAAGTACAAAGAAG+AGG + chr2_1:60562814-60562833 None:intergenic 25.0%
! TTGTCTTATCTTGATTTCTA+AGG - chr2_1:60562891-60562910 Msa0215360:CDS 25.0%
! TCTTCTGACATTTATGAAAA+TGG - chr2_1:60563084-60563103 Msa0215360:CDS 25.0%
!! AAATAGCATCTCTGTTTTAT+TGG - chr2_1:60563234-60563253 Msa0215360:CDS 25.0%
!!! AATAGCATCTCTGTTTTATT+GGG - chr2_1:60563235-60563254 Msa0215360:CDS 25.0%
! TCATTAAGTGAAATTTACGT+GGG + chr2_1:60563647-60563666 None:intergenic 25.0%
! ATCATTAAGTGAAATTTACG+TGG + chr2_1:60563648-60563667 None:intergenic 25.0%
!! AAGAAATGGATTTAGAAACA+TGG + chr2_1:60563796-60563815 None:intergenic 25.0%
! ACATCTGCTAATAAAAGAAA+TGG + chr2_1:60563810-60563829 None:intergenic 25.0%
! TTACTTGAAAAATCCTTGTA+TGG - chr2_1:60563979-60563998 Msa0215360:intron 25.0%
!!! GTATTTTCATTTGGTGTATT+TGG - chr2_1:60564019-60564038 Msa0215360:intron 25.0%
! TATCAATATAGGTGAAGTAA+TGG - chr2_1:60564649-60564668 Msa0215360:five_prime_UTR 25.0%
!!! TATGATGAAACCGTTATTTT+TGG - chr2_1:60564767-60564786 Msa0215360:five_prime_UTR 25.0%
! GAAAAATACATTGGAAGTAA+AGG - chr2_1:60564895-60564914 Msa0215360:five_prime_UTR 25.0%
! AAAATACATTGGAAGTAAAG+GGG - chr2_1:60564897-60564916 Msa0215360:five_prime_UTR 25.0%
! AAATGAAATCTGTTCTAACT+TGG - chr2_1:60564953-60564972 Msa0215360:five_prime_UTR 25.0%
GTATAGTTGCTTCATCTAAA+AGG - chr2_1:60555422-60555441 Msa0215360:three_prime_UTR 30.0%
CATTTGGATTTGTCTATTTG+TGG + chr2_1:60555464-60555483 None:intergenic 30.0%
!!! CATAAAGCTATTTTTTGAGG+TGG - chr2_1:60555609-60555628 Msa0215360:three_prime_UTR 30.0%
!!! TAAAGCTATTTTTTGAGGTG+GGG - chr2_1:60555611-60555630 Msa0215360:three_prime_UTR 30.0%
! ATTTCGAGAAACCCTAATTT+TGG - chr2_1:60555682-60555701 Msa0215360:CDS 30.0%
ATTTCTTGAGAATCTGAGTT+GGG - chr2_1:60555730-60555749 Msa0215360:CDS 30.0%
TTCATTCATGCATGTAGATT+TGG - chr2_1:60555819-60555838 Msa0215360:CDS 30.0%
!!! TTTTAGCTTGTGAAGTTTGA+TGG - chr2_1:60555937-60555956 Msa0215360:CDS 30.0%
!! ATCTAGTCTTTGTTGTTGAT+AGG - chr2_1:60556109-60556128 Msa0215360:CDS 30.0%
ACATGAATGAAAATTGGGAA+TGG - chr2_1:60556381-60556400 Msa0215360:intron 30.0%
! TCCTCTCTCTAAACTAATTT+TGG - chr2_1:60556555-60556574 Msa0215360:CDS 30.0%
! TCCAAAATTAGTTTAGAGAG+AGG + chr2_1:60556559-60556578 None:intergenic 30.0%
! TGAATTTGTTTACAGTATGC+AGG - chr2_1:60556864-60556883 Msa0215360:intron 30.0%
TTATGCGATGATAACTTTGA+AGG - chr2_1:60556984-60557003 Msa0215360:intron 30.0%
! AGAAAGACAGATTTTTACAG+AGG - chr2_1:60557016-60557035 Msa0215360:intron 30.0%
! TGACTTAAATGTGTTTTTCG+TGG + chr2_1:60557117-60557136 None:intergenic 30.0%
TCTGAATTAGATGTACTACA+AGG + chr2_1:60557335-60557354 None:intergenic 30.0%
! AGGTTGGAAATTACTACTTT+TGG + chr2_1:60557380-60557399 None:intergenic 30.0%
ACAGTTGAATCATCTAAACA+CGG - chr2_1:60557446-60557465 Msa0215360:CDS 30.0%
CTATGTATTGAAGCATAACT+TGG - chr2_1:60557484-60557503 Msa0215360:CDS 30.0%
AGGGTTTCAATCTTCTAATA+TGG - chr2_1:60557721-60557740 Msa0215360:CDS 30.0%
ACAAAAGTTTGGAGATTATG+TGG - chr2_1:60557920-60557939 Msa0215360:intron 30.0%
! ACTTTTCAACAGACAAAAGT+TGG + chr2_1:60557946-60557965 None:intergenic 30.0%
! GAAAAGTGCAATGTAACATA+TGG - chr2_1:60557959-60557978 Msa0215360:intron 30.0%
TAATATTGGTCCATTCCTTA+CGG + chr2_1:60557988-60558007 None:intergenic 30.0%
!! TTGTAGCTTAGTTTCTAGTA+AGG - chr2_1:60558186-60558205 Msa0215360:intron 30.0%
!! TGTAGCTTAGTTTCTAGTAA+GGG - chr2_1:60558187-60558206 Msa0215360:intron 30.0%
!! AGTTTCTAGTAAGGGTAAAA+TGG - chr2_1:60558195-60558214 Msa0215360:intron 30.0%
! CATAAAAGCAGATATTTCTG+TGG + chr2_1:60558353-60558372 None:intergenic 30.0%
TCACTGACATTTCCATTAAT+CGG + chr2_1:60558462-60558481 None:intergenic 30.0%
!! TTTTTGGGAAAGATAGTACA+TGG - chr2_1:60558719-60558738 Msa0215360:intron 30.0%
! TTGTTTTCTTAATATGTCGC+TGG + chr2_1:60558981-60559000 None:intergenic 30.0%
ATCTTCAATATGGCATCTAT+TGG + chr2_1:60559031-60559050 None:intergenic 30.0%
ATAGATCGTCATCTTCAATA+TGG + chr2_1:60559041-60559060 None:intergenic 30.0%
ATTTACCTCGGATTATCTTT+GGG + chr2_1:60559098-60559117 None:intergenic 30.0%
!! ATTTAGCTCTAGATTTACCT+CGG + chr2_1:60559110-60559129 None:intergenic 30.0%
AGAAAGCTTAAAAGCCATAA+AGG - chr2_1:60559150-60559169 Msa0215360:intron 30.0%
!! ATGGGAAGAAGTATTATCTT+GGG - chr2_1:60559226-60559245 Msa0215360:intron 30.0%
!! CAGAATTATCTTTAGGGTTT+CGG + chr2_1:60559317-60559336 None:intergenic 30.0%
TCATGAAAAGATTCAAGCAA+GGG + chr2_1:60559446-60559465 None:intergenic 30.0%
TTCATGAAAAGATTCAAGCA+AGG + chr2_1:60559447-60559466 None:intergenic 30.0%
! TTGAATCTTTTCATGAAGTC+TGG - chr2_1:60559450-60559469 Msa0215360:CDS 30.0%
ACAATTTATCAGCAATGACA+AGG + chr2_1:60559727-60559746 None:intergenic 30.0%
ACATGAATGCATCATTATCA+AGG - chr2_1:60560026-60560045 Msa0215360:CDS 30.0%
CATGAATGCATCATTATCAA+GGG - chr2_1:60560027-60560046 Msa0215360:CDS 30.0%
TGTCAAACATTATGCTATGT+TGG - chr2_1:60560112-60560131 Msa0215360:intron 30.0%
TGCATGGAATAAAAAGAAGT+AGG + chr2_1:60560259-60560278 None:intergenic 30.0%
TTATGGATGTGACTATTGTT+GGG - chr2_1:60560319-60560338 Msa0215360:intron 30.0%
!!! ATGTTTTGTTTCTGTACATC+AGG - chr2_1:60560373-60560392 Msa0215360:intron 30.0%
CTCAATACAAATGGAAGTAA+TGG + chr2_1:60561086-60561105 None:intergenic 30.0%
CATATTGTATGACAGTGTAA+TGG - chr2_1:60561151-60561170 Msa0215360:CDS 30.0%
!! TAAAAGTACTTGTAGGTTTC+TGG - chr2_1:60561257-60561276 Msa0215360:CDS 30.0%
!!! GTCACTTGTTTTTACTAGAA+TGG - chr2_1:60561560-60561579 Msa0215360:CDS 30.0%
!!! CACTTGTTTTTACTAGAATG+GGG - chr2_1:60561562-60561581 Msa0215360:CDS 30.0%
!!! ACTTGTTTTTACTAGAATGG+GGG - chr2_1:60561563-60561582 Msa0215360:CDS 30.0%
ACATGATATTAGAGGTTCTA+CGG + chr2_1:60561620-60561639 None:intergenic 30.0%
CTCAAACAACATGATATTAG+AGG + chr2_1:60561628-60561647 None:intergenic 30.0%
GATTTACCTGTGAATAATCA+TGG - chr2_1:60561846-60561865 Msa0215360:CDS 30.0%
AAGTATCCATGATTATTCAC+AGG + chr2_1:60561855-60561874 None:intergenic 30.0%
TATCTAATGCAACTTGATGT+GGG + chr2_1:60562061-60562080 None:intergenic 30.0%
TTATCTAATGCAACTTGATG+TGG + chr2_1:60562062-60562081 None:intergenic 30.0%
ATCATACTGATAAGTATCCA+AGG + chr2_1:60562155-60562174 None:intergenic 30.0%
TTGGATACTTATCAGTATGA+TGG - chr2_1:60562154-60562173 Msa0215360:CDS 30.0%
TGGATACTTATCAGTATGAT+GGG - chr2_1:60562155-60562174 Msa0215360:CDS 30.0%
TTATCCTAACATCATCTCAT+TGG - chr2_1:60562473-60562492 Msa0215360:CDS 30.0%
TCAATGTTAGATCTAAGAAC+AGG - chr2_1:60562721-60562740 Msa0215360:CDS 30.0%
!!! TACCCCAAGTTTTATTCAAT+TGG - chr2_1:60562755-60562774 Msa0215360:CDS 30.0%
!!! ACCCCAAGTTTTATTCAATT+GGG - chr2_1:60562756-60562775 Msa0215360:CDS 30.0%
! ATAAGAGACGGAGTATTATT+TGG + chr2_1:60562841-60562860 None:intergenic 30.0%
TTGAAATAGAGCATAAGAGA+CGG + chr2_1:60562853-60562872 None:intergenic 30.0%
TATTTCAAAGCCTCAACTTT+AGG - chr2_1:60562865-60562884 Msa0215360:CDS 30.0%
AAGACAAAATCCTAAAGTTG+AGG + chr2_1:60562878-60562897 None:intergenic 30.0%
TAATATCTGTAGCATCTATC+AGG - chr2_1:60563003-60563022 Msa0215360:CDS 30.0%
CAATTCATTCATAAATCGAC+TGG + chr2_1:60563187-60563206 None:intergenic 30.0%
ATTTGATATGGATTTGCACT+TGG - chr2_1:60563513-60563532 Msa0215360:five_prime_UTR 30.0%
TGTATAAACAGCTATGAGTT+CGG - chr2_1:60563727-60563746 Msa0215360:intron 30.0%
! AATGGATTTAGAAACATGGA+AGG + chr2_1:60563792-60563811 None:intergenic 30.0%
! AACAACTTAATGGTTTTTCC+TGG - chr2_1:60563949-60563968 Msa0215360:intron 30.0%
!!! AAGACGAAGGTATTTTCATT+TGG - chr2_1:60564010-60564029 Msa0215360:intron 30.0%
ATAATAGTCATACGAAAGGA+TGG + chr2_1:60564125-60564144 None:intergenic 30.0%
ATCCTTTCGTATGACTATTA+TGG - chr2_1:60564124-60564143 Msa0215360:intron 30.0%
TACCATAATAGTCATACGAA+AGG + chr2_1:60564129-60564148 None:intergenic 30.0%
!!! ATTGTTTTGTTTGCTGAAAC+AGG - chr2_1:60564254-60564273 Msa0215360:five_prime_UTR 30.0%
ACAGATGAATCATTCAAAGT+AGG - chr2_1:60564302-60564321 Msa0215360:five_prime_UTR 30.0%
CAAAAATCAACCAGACAATA+GGG - chr2_1:60564430-60564449 Msa0215360:five_prime_UTR 30.0%
ATCTCCTAATGCAATTTCAA+CGG + chr2_1:60564492-60564511 None:intergenic 30.0%
GAGGACAAGAATATCAATAT+AGG - chr2_1:60564638-60564657 Msa0215360:five_prime_UTR 30.0%
AACTCTGCAAATTAGAGAAA+TGG - chr2_1:60564800-60564819 Msa0215360:five_prime_UTR 30.0%
GCTCTTAATATACACGTTAT+TGG - chr2_1:60564829-60564848 Msa0215360:five_prime_UTR 30.0%
AGTAAAGGGGTGATATAATT+AGG - chr2_1:60564910-60564929 Msa0215360:five_prime_UTR 30.0%
AACAGAATGAAAAAGTAGAG+AGG - chr2_1:60564991-60565010 Msa0215360:five_prime_UTR 30.0%
ACAGAATGAAAAAGTAGAGA+GGG - chr2_1:60564992-60565011 Msa0215360:five_prime_UTR 30.0%
AAATCCAAATGCAAGTCACA+TGG - chr2_1:60555473-60555492 Msa0215360:three_prime_UTR 35.0%
AATCCAAATGCAAGTCACAT+GGG - chr2_1:60555474-60555493 Msa0215360:three_prime_UTR 35.0%
AGAGAGAGAAACTCAGAAAA+AGG - chr2_1:60555515-60555534 Msa0215360:three_prime_UTR 35.0%
GAGAGAGAAACTCAGAAAAA+GGG - chr2_1:60555516-60555535 Msa0215360:three_prime_UTR 35.0%
GAATTCGTTGTAGCATTGTT+GGG - chr2_1:60555580-60555599 Msa0215360:three_prime_UTR 35.0%
GATTTCTTGAGAATCTGAGT+TGG - chr2_1:60555729-60555748 Msa0215360:CDS 35.0%
GCTTGAAGATTTATCAATGC+TGG - chr2_1:60556061-60556080 Msa0215360:CDS 35.0%
! AAGATTTATCAATGCTGGCT+TGG - chr2_1:60556066-60556085 Msa0215360:CDS 35.0%
CGATGATTCTCTACAGTTAT+AGG - chr2_1:60556290-60556309 Msa0215360:intron 35.0%
ATGTAAAGTAGCACTTATCC+TGG - chr2_1:60556451-60556470 Msa0215360:CDS 35.0%
TGGAAAGAACGTGTTAATTG+TGG - chr2_1:60556575-60556594 Msa0215360:CDS 35.0%
GGAAAGAACGTGTTAATTGT+GGG - chr2_1:60556576-60556595 Msa0215360:CDS 35.0%
AGCTAGCCATTTATAATGGT+GGG - chr2_1:60556887-60556906 Msa0215360:intron 35.0%
! TTTTCGTGGATTCATGTTCA+AGG + chr2_1:60557103-60557122 None:intergenic 35.0%
!! TGGCTCTAGTAATGAAAACT+CGG - chr2_1:60557139-60557158 Msa0215360:CDS 35.0%
GTAATGAAAACTCGGTCATA+TGG - chr2_1:60557147-60557166 Msa0215360:intron 35.0%
TCTTCACAAGTTAAACTCTC+TGG + chr2_1:60557257-60557276 None:intergenic 35.0%
TTAGAAGATTGAAACCCTTC+AGG + chr2_1:60557719-60557738 None:intergenic 35.0%
ACGATATGAAACTGCAGTAA+GGG + chr2_1:60557791-60557810 None:intergenic 35.0%
TCATTCTACAAGACACCAAA+GGG - chr2_1:60557878-60557897 Msa0215360:CDS 35.0%
CACCAAAGGGAAAAATTATG+CGG - chr2_1:60557891-60557910 Msa0215360:CDS 35.0%
ACCAAAGGGAAAAATTATGC+GGG - chr2_1:60557892-60557911 Msa0215360:intron 35.0%
TGCGGGAATTTACAAAAGTT+TGG - chr2_1:60557909-60557928 Msa0215360:intron 35.0%
AAGTGCAATGTAACATATGG+AGG - chr2_1:60557962-60557981 Msa0215360:intron 35.0%
! GGACCAATATTAGCGATTTT+TGG - chr2_1:60557996-60558015 Msa0215360:intron 35.0%
GGACCAAAAATCGCTAATAT+TGG + chr2_1:60558002-60558021 None:intergenic 35.0%
CTTCGACATACATATCTTCT+TGG + chr2_1:60558414-60558433 None:intergenic 35.0%
! AATCGGTTCTCTATGATGTT+TGG + chr2_1:60558445-60558464 None:intergenic 35.0%
CATCATAGAGAACCGATTAA+TGG - chr2_1:60558447-60558466 Msa0215360:intron 35.0%
!! AAAAGAGGAAGCACTTGAAT+GGG + chr2_1:60558542-60558561 None:intergenic 35.0%
GCTTGTAAGAACATCAAAAG+AGG + chr2_1:60558557-60558576 None:intergenic 35.0%
TTTGATGTTCTTACAAGCTC+TGG - chr2_1:60558559-60558578 Msa0215360:intron 35.0%
!! TCTTACAAGCTCTGGAAATT+TGG - chr2_1:60558567-60558586 Msa0215360:intron 35.0%
ATAAGCACGCATCAGAAAAT+CGG - chr2_1:60558650-60558669 Msa0215360:intron 35.0%
!! ATCTCAATGGCTTGTGTTTT+TGG - chr2_1:60558703-60558722 Msa0215360:intron 35.0%
!! TCTCAATGGCTTGTGTTTTT+GGG - chr2_1:60558704-60558723 Msa0215360:intron 35.0%
TCACTGTGGTATAACATACT+CGG + chr2_1:60558811-60558830 None:intergenic 35.0%
TTATACCACAGTGACATACT+GGG - chr2_1:60558817-60558836 Msa0215360:intron 35.0%
AGATTATGTAGTTGACAGTG+TGG - chr2_1:60558915-60558934 Msa0215360:intron 35.0%
GATTATGTAGTTGACAGTGT+GGG - chr2_1:60558916-60558935 Msa0215360:intron 35.0%
TTGACAGTGTGGGAAAAAAA+AGG - chr2_1:60558926-60558945 Msa0215360:intron 35.0%
AGGAACAAGAAGAAGTTATC+AGG - chr2_1:60558946-60558965 Msa0215360:intron 35.0%
GTCAGCAATACTCAAGAATA+AGG - chr2_1:60559065-60559084 Msa0215360:intron 35.0%
GATTTACCTCGGATTATCTT+TGG + chr2_1:60559099-60559118 None:intergenic 35.0%
! GGTAAATCTAGAGCTAAATC+CGG - chr2_1:60559111-60559130 Msa0215360:intron 35.0%
!! GATGGGAAGAAGTATTATCT+TGG - chr2_1:60559225-60559244 Msa0215360:intron 35.0%
!! TGGGAAGAAGTATTATCTTG+GGG - chr2_1:60559227-60559246 Msa0215360:intron 35.0%
!! AGAAGTATTATCTTGGGGAA+AGG - chr2_1:60559232-60559251 Msa0215360:intron 35.0%
GATAATTCTGTCACTAAGGA+TGG - chr2_1:60559327-60559346 Msa0215360:intron 35.0%
CTTACAAACAATACCGTCTT+TGG + chr2_1:60559361-60559380 None:intergenic 35.0%
! GGTATTGTTTGTAAGTGTTG+TGG - chr2_1:60559366-60559385 Msa0215360:intron 35.0%
! TGTTTGTAAGTGTTGTGGTA+AGG - chr2_1:60559371-60559390 Msa0215360:intron 35.0%
!!! AGCTTGATTTTGACTTTTCC+TGG + chr2_1:60559526-60559545 None:intergenic 35.0%
AGGAAAAGTCAAAATCAAGC+TGG - chr2_1:60559525-60559544 Msa0215360:intron 35.0%
GGAAAAGTCAAAATCAAGCT+GGG - chr2_1:60559526-60559545 Msa0215360:intron 35.0%
AATTCAAACCTGCTATTGAG+TGG - chr2_1:60559766-60559785 Msa0215360:intron 35.0%
AAGGTGTGTATATGTGAGAA+TGG + chr2_1:60559813-60559832 None:intergenic 35.0%
!!! CAAGTGTTTTGCTGTTGTAA+AGG + chr2_1:60559832-60559851 None:intergenic 35.0%
TCATGTTCTTACAAGCGATA+TGG + chr2_1:60559983-60560002 None:intergenic 35.0%
GTTTGACAGTTCGTTTGTAT+TGG + chr2_1:60560100-60560119 None:intergenic 35.0%
CTTATGGATGTGACTATTGT+TGG - chr2_1:60560318-60560337 Msa0215360:intron 35.0%
! AAACATGTGTCATTCTTCTG+AGG + chr2_1:60560359-60560378 None:intergenic 35.0%
TTGTCGGATTTGTGGAAATT+TGG - chr2_1:60560433-60560452 Msa0215360:intron 35.0%
ATTATGCAACGTGAACATGA+AGG + chr2_1:60560532-60560551 None:intergenic 35.0%
ACGTTGCATAATAGATTGCA+TGG - chr2_1:60560540-60560559 Msa0215360:intron 35.0%
CTAATGGCTGAACAATTTGT+TGG - chr2_1:60560668-60560687 Msa0215360:intron 35.0%
TCCTCAAACTCTACAATTGT+TGG - chr2_1:60560785-60560804 Msa0215360:CDS 35.0%
ACCAACAATTGTAGAGTTTG+AGG + chr2_1:60560789-60560808 None:intergenic 35.0%
ATAGATCACAAGAAATGCCT+CGG - chr2_1:60560970-60560989 Msa0215360:CDS 35.0%
GGAGAAAGAGATAAACAAGA+AGG - chr2_1:60560991-60561010 Msa0215360:CDS 35.0%
!! GGTTTTGTAGTCAAAGTTGT+CGG - chr2_1:60561031-60561050 Msa0215360:CDS 35.0%
! GTTTTGTAGTCAAAGTTGTC+GGG - chr2_1:60561032-60561051 Msa0215360:CDS 35.0%
ACTGTCATACAATATGTCAC+AGG + chr2_1:60561147-60561166 None:intergenic 35.0%
TATGCATTCACACCTTTAAG+AGG - chr2_1:60561790-60561809 Msa0215360:CDS 35.0%
CACTTCGGTTAATAGGTAAT+CGG - chr2_1:60561882-60561901 Msa0215360:CDS 35.0%
TGCTTGAAAAGGGTTAACTA+GGG - chr2_1:60561925-60561944 Msa0215360:CDS 35.0%
CGATAGGAACTTGGTTATTA+TGG - chr2_1:60562024-60562043 Msa0215360:CDS 35.0%
GTTAGACTATTTAAGTGGCT+TGG - chr2_1:60562084-60562103 Msa0215360:CDS 35.0%
TTAAAAGCTAGCTATCGAGA+AGG + chr2_1:60562115-60562134 None:intergenic 35.0%
!!! TTCTCGATAGCTAGCTTTTA+AGG - chr2_1:60562114-60562133 Msa0215360:CDS 35.0%
!!! TCTCGATAGCTAGCTTTTAA+GGG - chr2_1:60562115-60562134 Msa0215360:CDS 35.0%
TGATAAGTATCCAAGGACTT+GGG + chr2_1:60562148-60562167 None:intergenic 35.0%
!!! GGGTTTTTTATTTCACCGTA+AGG - chr2_1:60562244-60562263 Msa0215360:CDS 35.0%
AGGAGTTACAAGTTAACAGT+TGG - chr2_1:60562273-60562292 Msa0215360:CDS 35.0%
GGAGTTACAAGTTAACAGTT+GGG - chr2_1:60562274-60562293 Msa0215360:CDS 35.0%
GAGTTACAAGTTAACAGTTG+GGG - chr2_1:60562275-60562294 Msa0215360:CDS 35.0%
AGTAAACCTAACCTAGAATG+CGG - chr2_1:60562359-60562378 Msa0215360:CDS 35.0%
TATTAACCGCATTCTAGGTT+AGG + chr2_1:60562368-60562387 None:intergenic 35.0%
CTAGTTATTAACCGCATTCT+AGG + chr2_1:60562373-60562392 None:intergenic 35.0%
ATGCGGTTAATAACTAGATC+AGG - chr2_1:60562376-60562395 Msa0215360:CDS 35.0%
AACACCAATGAGATGATGTT+AGG + chr2_1:60562480-60562499 None:intergenic 35.0%
! CTAGTTAATCAAGTTGCTGA+TGG - chr2_1:60562568-60562587 Msa0215360:CDS 35.0%
TGTATTGCAAACTGCCTTTA+GGG + chr2_1:60562659-60562678 None:intergenic 35.0%
TTGTATTGCAAACTGCCTTT+AGG + chr2_1:60562660-60562679 None:intergenic 35.0%
! ATAAAACTTGGGGTATCATG+TGG + chr2_1:60562750-60562769 None:intergenic 35.0%
CCCCAATTGAATAAAACTTG+GGG + chr2_1:60562760-60562779 None:intergenic 35.0%
!!! CCCCAAGTTTTATTCAATTG+GGG - chr2_1:60562757-60562776 Msa0215360:CDS 35.0%
CCCCCAATTGAATAAAACTT+GGG + chr2_1:60562761-60562780 None:intergenic 35.0%
!!! CCCAAGTTTTATTCAATTGG+GGG - chr2_1:60562758-60562777 Msa0215360:CDS 35.0%
ACCCCCAATTGAATAAAACT+TGG + chr2_1:60562762-60562781 None:intergenic 35.0%
TTTATTCAATTGGGGGTTAG+TGG - chr2_1:60562765-60562784 Msa0215360:CDS 35.0%
AGAGGTGGAAAAATTGTCAT+GGG + chr2_1:60562796-60562815 None:intergenic 35.0%
AAGAGGTGGAAAAATTGTCA+TGG + chr2_1:60562797-60562816 None:intergenic 35.0%
AATGAAGTACAAAGAAGAGG+TGG + chr2_1:60562811-60562830 None:intergenic 35.0%
! TTAACTTCCATGTGGTTTTC+AGG - chr2_1:60562916-60562935 Msa0215360:CDS 35.0%
! TTTGCTCGTCTGAATTTTCA+AGG - chr2_1:60562945-60562964 Msa0215360:CDS 35.0%
! TTGCTCGTCTGAATTTTCAA+GGG - chr2_1:60562946-60562965 Msa0215360:CDS 35.0%
!! TTTTCAAGGGTTTTACACAG+TGG - chr2_1:60562959-60562978 Msa0215360:CDS 35.0%
CATTCATAAATCGACTGGAA+GGG + chr2_1:60563182-60563201 None:intergenic 35.0%
TCATTCATAAATCGACTGGA+AGG + chr2_1:60563183-60563202 None:intergenic 35.0%
! ATTCCTGCATTTGCTTCTTT+TGG - chr2_1:60563753-60563772 Msa0215360:intron 35.0%
GCAGATGTTAATATCTGTCA+AGG - chr2_1:60563822-60563841 Msa0215360:intron 35.0%
!!! TTTTCAAGTAACACTGTTCC+AGG + chr2_1:60563970-60563989 None:intergenic 35.0%
!! AGAGACTAGTTTCGATATAC+TGG - chr2_1:60564061-60564080 Msa0215360:intron 35.0%
! ACGAAAGGATGGTTTTTGAT+TGG + chr2_1:60564114-60564133 None:intergenic 35.0%
GCAAAAATCAACCAGACAAT+AGG - chr2_1:60564429-60564448 Msa0215360:five_prime_UTR 35.0%
AAGAATCAACAGAGACAAGT+AGG - chr2_1:60564513-60564532 Msa0215360:five_prime_UTR 35.0%
CACATTGTTTCCTTCAAAAG+GGG + chr2_1:60564561-60564580 None:intergenic 35.0%
CCACATTGTTTCCTTCAAAA+GGG + chr2_1:60564562-60564581 None:intergenic 35.0%
TCCACATTGTTTCCTTCAAA+AGG + chr2_1:60564563-60564582 None:intergenic 35.0%
!! TTTTGAAGGAAACAATGTGG+AGG - chr2_1:60564562-60564581 Msa0215360:five_prime_UTR 35.0%
!!! AACCGTTATTTTTGGTTCAC+TGG - chr2_1:60564775-60564794 Msa0215360:five_prime_UTR 35.0%
TGCCAGTGAACCAAAAATAA+CGG + chr2_1:60564780-60564799 None:intergenic 35.0%
TCTGCAAATTAGAGAAATGG+TGG - chr2_1:60564803-60564822 Msa0215360:five_prime_UTR 35.0%
CTGCAAATTAGAGAAATGGT+GGG - chr2_1:60564804-60564823 Msa0215360:five_prime_UTR 35.0%
TTTCACGCTAGCTAATGTTT+AGG + chr2_1:60564936-60564955 None:intergenic 35.0%
TCACATGGGAAGAAAGGATA+TGG - chr2_1:60555488-60555507 Msa0215360:three_prime_UTR 40.0%
GGAATTCGTTGTAGCATTGT+TGG - chr2_1:60555579-60555598 Msa0215360:three_prime_UTR 40.0%
! TCGAGAAACCCTAATTTTGG+TGG - chr2_1:60555685-60555704 Msa0215360:CDS 40.0%
!! CGAGAAACCCTAATTTTGGT+GGG - chr2_1:60555686-60555705 Msa0215360:CDS 40.0%
CAGTTCACCCACCAAAATTA+GGG + chr2_1:60555696-60555715 None:intergenic 40.0%
ACAGTTCACCCACCAAAATT+AGG + chr2_1:60555697-60555716 None:intergenic 40.0%
! TTGAGAATCTGAGTTGGGTA+GGG - chr2_1:60555735-60555754 Msa0215360:CDS 40.0%
! TCGTTAATTTCTAGAGGAGC+TGG - chr2_1:60555790-60555809 Msa0215360:CDS 40.0%
GCATGTAGATTTGGAGAAAC+TGG - chr2_1:60555828-60555847 Msa0215360:CDS 40.0%
GAGATTACACCTACAACTAG+AGG - chr2_1:60556168-60556187 Msa0215360:intron 40.0%
CAGTAACAACCTCTAGTTGT+AGG + chr2_1:60556180-60556199 None:intergenic 40.0%
AGAAATGAAGATCGTCAACC+AGG - chr2_1:60556811-60556830 Msa0215360:intron 40.0%
GAAATGAAGATCGTCAACCA+GGG - chr2_1:60556812-60556831 Msa0215360:intron 40.0%
CAGGAGCTAGCCATTTATAA+TGG - chr2_1:60556883-60556902 Msa0215360:intron 40.0%
GAGCTAGCCATTTATAATGG+TGG - chr2_1:60556886-60556905 Msa0215360:intron 40.0%
! TAGCCATTTATAATGGTGGG+TGG - chr2_1:60556890-60556909 Msa0215360:intron 40.0%
!! AGCCATTTATAATGGTGGGT+GGG - chr2_1:60556891-60556910 Msa0215360:intron 40.0%
CACTTCACAGCTTCTATTAC+TGG + chr2_1:60556932-60556951 None:intergenic 40.0%
TGCACTAGTCAGCAACAAAA+TGG - chr2_1:60556956-60556975 Msa0215360:intron 40.0%
! ACACTTTTCAGTCTAGTCAG+AGG - chr2_1:60557054-60557073 Msa0215360:intron 40.0%
GGATTCATGTTCAAGGTTGA+TGG + chr2_1:60557096-60557115 None:intergenic 40.0%
TGGGTAAATCTTGAAGACGA+GGG + chr2_1:60557176-60557195 None:intergenic 40.0%
ATGGGTAAATCTTGAAGACG+AGG + chr2_1:60557177-60557196 None:intergenic 40.0%
TTCAAGATTTACCCATCCTG+AGG - chr2_1:60557181-60557200 Msa0215360:intron 40.0%
ATTAATGTCCTCCTCAGGAT+GGG + chr2_1:60557195-60557214 None:intergenic 40.0%
ATTGCATTAATGTCCTCCTC+AGG + chr2_1:60557200-60557219 None:intergenic 40.0%
!!! TCAGATGTTTTGGGTTCATC+TGG - chr2_1:60557350-60557369 Msa0215360:intron 40.0%
TACTTACAGACACCTCCTTT+GGG + chr2_1:60557583-60557602 None:intergenic 40.0%
TTACTTACAGACACCTCCTT+TGG + chr2_1:60557584-60557603 None:intergenic 40.0%
!! AAAGGAGGTGTCTGTAAGTA+AGG - chr2_1:60557583-60557602 Msa0215360:intron 40.0%
TTCTTCACAACAGTGATTGC+TGG + chr2_1:60557665-60557684 None:intergenic 40.0%
GGCATTTCCTCAGTTCTTAA+GGG + chr2_1:60557698-60557717 None:intergenic 40.0%
AGGCATTTCCTCAGTTCTTA+AGG + chr2_1:60557699-60557718 None:intergenic 40.0%
TATGAAACTGCAGTAAGGGA+CGG + chr2_1:60557787-60557806 None:intergenic 40.0%
CACGATATGAAACTGCAGTA+AGG + chr2_1:60557792-60557811 None:intergenic 40.0%
GTCATTCTACAAGACACCAA+AGG - chr2_1:60557877-60557896 Msa0215360:CDS 40.0%
! TCCCGCATAATTTTTCCCTT+TGG + chr2_1:60557896-60557915 None:intergenic 40.0%
TTTCAGTGCACTCGATAGAT+CGG + chr2_1:60558023-60558042 None:intergenic 40.0%
TTGATAAGCCAACATAGCAG+CGG + chr2_1:60558077-60558096 None:intergenic 40.0%
!! CTGCTATGTTGGCTTATCAA+TGG - chr2_1:60558077-60558096 Msa0215360:intron 40.0%
!! CTATGTTGGCTTATCAATGG+TGG - chr2_1:60558080-60558099 Msa0215360:intron 40.0%
!! GGCTTATCAATGGTGGATTA+TGG - chr2_1:60558087-60558106 Msa0215360:intron 40.0%
TGTTGAAGAGTCGCAGAAAA+TGG + chr2_1:60558320-60558339 None:intergenic 40.0%
!! AGATATTTCTGTGGTTCTGG+TGG + chr2_1:60558344-60558363 None:intergenic 40.0%
! AGCAGATATTTCTGTGGTTC+TGG + chr2_1:60558347-60558366 None:intergenic 40.0%
GCTTGTAAACAGACATCTGA+CGG - chr2_1:60558385-60558404 Msa0215360:intron 40.0%
GTCAGTGAGCAAAAGTAGTA+TGG - chr2_1:60558474-60558493 Msa0215360:intron 40.0%
TCTTTACCTGCTTGTGCATT+GGG - chr2_1:60558505-60558524 Msa0215360:intron 40.0%
!! CAAAAGAGGAAGCACTTGAA+TGG + chr2_1:60558543-60558562 None:intergenic 40.0%
!! AAGCTCTGGAAATTTGGACT+CGG - chr2_1:60558573-60558592 Msa0215360:intron 40.0%
AGTACATGGTCTTCCTCTAA+TGG - chr2_1:60558733-60558752 Msa0215360:intron 40.0%
! AAATGCGGAAGAAGTGCAAA+AGG - chr2_1:60558770-60558789 Msa0215360:intron 40.0%
GTTATACCACAGTGACATAC+TGG - chr2_1:60558816-60558835 Msa0215360:intron 40.0%
GGGATCAACTATTACTGATC+AGG - chr2_1:60558837-60558856 Msa0215360:intron 40.0%
! TCACTGAATGGTGATGTATG+TGG - chr2_1:60558865-60558884 Msa0215360:intron 40.0%
TTCAACCCAAAGATAATCCG+AGG - chr2_1:60559090-60559109 Msa0215360:intron 40.0%
AGCTAAATCCGGCAAATCAA+GGG - chr2_1:60559122-60559141 Msa0215360:intron 40.0%
! CAAGGAATCCTTGTAATGGA+GGG - chr2_1:60559190-60559209 Msa0215360:intron 40.0%
! TAATGGAGGGAAGCACAATA+TGG - chr2_1:60559203-60559222 Msa0215360:intron 40.0%
TCAGAGTTCAAGATTCATGC+TGG - chr2_1:60559405-60559424 Msa0215360:CDS 40.0%
CAGAGTTCAAGATTCATGCT+GGG - chr2_1:60559406-60559425 Msa0215360:CDS 40.0%
TGAAGGAGGCAAAGTGTAAA+GGG + chr2_1:60559480-60559499 None:intergenic 40.0%
TTGAAGGAGGCAAAGTGTAA+AGG + chr2_1:60559481-60559500 None:intergenic 40.0%
GACAGAAATGATGATTCGTG+CGG - chr2_1:60559564-60559583 Msa0215360:intron 40.0%
ACAGAAATGATGATTCGTGC+GGG - chr2_1:60559565-60559584 Msa0215360:intron 40.0%
TAAACCAACCACTCAATAGC+AGG + chr2_1:60559777-60559796 None:intergenic 40.0%
TTGGCTGTGATTTGATGAGT+AGG - chr2_1:60560131-60560150 Msa0215360:intron 40.0%
CAAGAGAGCGAATATACTCA+TGG + chr2_1:60560159-60560178 None:intergenic 40.0%
AGATAGAGATGTGCATGTGT+TGG + chr2_1:60560220-60560239 None:intergenic 40.0%
ACTGCATAAACTGCACTTGT+CGG - chr2_1:60560417-60560436 Msa0215360:intron 40.0%
CTTGTTTATCTCTTTCTCCG+AGG + chr2_1:60560990-60561009 None:intergenic 40.0%
GTAGCAAGTATAGCTCCAAA+AGG - chr2_1:60561319-60561338 Msa0215360:CDS 40.0%
ATTGATTGTCCCCAAAGCTT+AGG - chr2_1:60561473-60561492 Msa0215360:CDS 40.0%
ACACAGTAGAAGAGTAGAGT+GGG + chr2_1:60561533-60561552 None:intergenic 40.0%
! TTTTTACTAGAATGGGGGCA+TGG - chr2_1:60561568-60561587 Msa0215360:CDS 40.0%
TTGCTTTCGTTACATACCAC+TGG - chr2_1:60561739-60561758 Msa0215360:CDS 40.0%
AAGACAAGCATAAACACCAG+TGG + chr2_1:60561758-60561777 None:intergenic 40.0%
!! ACCTTTAAGAGGTATTCGCT+TGG - chr2_1:60561801-60561820 Msa0215360:CDS 40.0%
ACCAAGCGAATACCTCTTAA+AGG + chr2_1:60561805-60561824 None:intergenic 40.0%
!! TTTAAGAGGTATTCGCTTGG+TGG - chr2_1:60561804-60561823 Msa0215360:CDS 40.0%
GGATACTTGATGTAGCACTT+CGG - chr2_1:60561867-60561886 Msa0215360:CDS 40.0%
GATGTAGCACTTCGGTTAAT+AGG - chr2_1:60561875-60561894 Msa0215360:CDS 40.0%
CTGCTTGAAAAGGGTTAACT+AGG - chr2_1:60561924-60561943 Msa0215360:CDS 40.0%
TGAAAAGGGTTAACTAGGGA+AGG - chr2_1:60561929-60561948 Msa0215360:CDS 40.0%
GAAAAGGGTTAACTAGGGAA+GGG - chr2_1:60561930-60561949 Msa0215360:CDS 40.0%
TGCAACTTGATGTGGGATTT+GGG + chr2_1:60562054-60562073 None:intergenic 40.0%
ATGCAACTTGATGTGGGATT+TGG + chr2_1:60562055-60562074 None:intergenic 40.0%
GATAAGTATCCAAGGACTTG+GGG + chr2_1:60562147-60562166 None:intergenic 40.0%
CTGATAAGTATCCAAGGACT+TGG + chr2_1:60562149-60562168 None:intergenic 40.0%
! ATTTCACCGTAAGGCTTGTT+AGG - chr2_1:60562253-60562272 Msa0215360:CDS 40.0%
GTAACTCCTAACAAGCCTTA+CGG + chr2_1:60562262-60562281 None:intergenic 40.0%
AGTTGGGGAAAGAGAAAATC+AGG - chr2_1:60562290-60562309 Msa0215360:CDS 40.0%
GTTGGGGAAAGAGAAAATCA+GGG - chr2_1:60562291-60562310 Msa0215360:CDS 40.0%
! TCAAGGACTTGACGACTTTT+TGG - chr2_1:60562506-60562525 Msa0215360:CDS 40.0%
ATACTGTACTCTCCAATCTC+AGG - chr2_1:60562540-60562559 Msa0215360:CDS 40.0%
ATGCATACATGATGACCAGA+AGG - chr2_1:60562612-60562631 Msa0215360:CDS 40.0%
ACACTCCTCCATGATTGTAA+GGG + chr2_1:60562695-60562714 None:intergenic 40.0%
AACACTCCTCCATGATTGTA+AGG + chr2_1:60562696-60562715 None:intergenic 40.0%
! CTAAGGCTTTAACTTCCATG+TGG - chr2_1:60562908-60562927 Msa0215360:CDS 40.0%
AATCAGACCTGAAAACCACA+TGG + chr2_1:60562926-60562945 None:intergenic 40.0%
GCACTCTGCAAACAAGTAAA+AGG + chr2_1:60563272-60563291 None:intergenic 40.0%
TTACTTGTTTGCAGAGTGCA+CGG - chr2_1:60563273-60563292 Msa0215360:CDS 40.0%
CTCAATCGAAGAGGTAAATC+TGG - chr2_1:60563374-60563393 Msa0215360:CDS 40.0%
!! AAGGGAGTGTTAATCCAACT+GGG + chr2_1:60563467-60563486 None:intergenic 40.0%
AAGCCAAAAGAAGCAAATGC+AGG + chr2_1:60563759-60563778 None:intergenic 40.0%
!!! CTTCTTTTGGCTTTCTCTCA+TGG - chr2_1:60563766-60563785 Msa0215360:intron 40.0%
TGTCAAGGTAGAAAAGCTTG+TGG - chr2_1:60563837-60563856 Msa0215360:intron 40.0%
TAGGCGACATTGAAAAACGA+AGG - chr2_1:60563917-60563936 Msa0215360:intron 40.0%
GTCTTTCTTCTTGCCATACA+AGG + chr2_1:60563995-60564014 None:intergenic 40.0%
TATGGCAAGAAGAAAGACGA+AGG - chr2_1:60563997-60564016 Msa0215360:intron 40.0%
AATCATTGCCGCTAGATGTT+GGG - chr2_1:60564354-60564373 Msa0215360:five_prime_UTR 40.0%
!! ATCTCTGCTGATTTCACTGT+CGG + chr2_1:60564456-60564475 None:intergenic 40.0%
CTAGCCGTTGAAATTGCATT+AGG - chr2_1:60564485-60564504 Msa0215360:five_prime_UTR 40.0%
ACAGAGACAAGTAGGTCTTT+CGG - chr2_1:60564521-60564540 Msa0215360:five_prime_UTR 40.0%
! GAGAAAATCACCCCTTTTGA+AGG - chr2_1:60564548-60564567 Msa0215360:five_prime_UTR 40.0%
!! CCCTTTTGAAGGAAACAATG+TGG - chr2_1:60564559-60564578 Msa0215360:five_prime_UTR 40.0%
TCTTTGTTGGCACTTGTTCT+TGG + chr2_1:60564590-60564609 None:intergenic 40.0%
AGAACAAGTGCCAACAAAGA+TGG - chr2_1:60564590-60564609 Msa0215360:five_prime_UTR 40.0%
AGATTCAGTGCCATCTTTGT+TGG + chr2_1:60564603-60564622 None:intergenic 40.0%
! AACAAAGATGGCACTGAATC+TGG - chr2_1:60564602-60564621 Msa0215360:five_prime_UTR 40.0%
! ATCTGGTGGAAGAGTTTTTG+AGG - chr2_1:60564619-60564638 Msa0215360:five_prime_UTR 40.0%
! CTTCCCATGTGACTTGCATT+TGG + chr2_1:60555480-60555499 None:intergenic 45.0%
TGCAAGTCACATGGGAAGAA+AGG - chr2_1:60555482-60555501 Msa0215360:three_prime_UTR 45.0%
!! TTGGTGGGTGAACTGTTTTG+TGG - chr2_1:60555701-60555720 Msa0215360:CDS 45.0%
! CTTGAGAATCTGAGTTGGGT+AGG - chr2_1:60555734-60555753 Msa0215360:CDS 45.0%
CTGGATTCGTAGACTGCATT+GGG - chr2_1:60556470-60556489 Msa0215360:CDS 45.0%
AGAACGTGTTAATTGTGGGC+AGG - chr2_1:60556580-60556599 Msa0215360:CDS 45.0%
GAACGTGTTAATTGTGGGCA+GGG - chr2_1:60556581-60556600 Msa0215360:CDS 45.0%
TTTCTTCAGCCAAAATGCCC+TGG + chr2_1:60556832-60556851 None:intergenic 45.0%
!! GCCATTTATAATGGTGGGTG+GGG - chr2_1:60556892-60556911 Msa0215360:intron 45.0%
ACCCCACCCACCATTATAAA+TGG + chr2_1:60556896-60556915 None:intergenic 45.0%
!! AGTCAGAGGCGTGTTATTTC+TGG - chr2_1:60557068-60557087 Msa0215360:CDS 45.0%
AAGATTTACCCATCCTGAGG+AGG - chr2_1:60557184-60557203 Msa0215360:intron 45.0%
CATTAATGTCCTCCTCAGGA+TGG + chr2_1:60557196-60557215 None:intergenic 45.0%
CATTCCAATGAGACTGCTCT+GGG - chr2_1:60557224-60557243 Msa0215360:intron 45.0%
ATTCCAATGAGACTGCTCTG+GGG - chr2_1:60557225-60557244 Msa0215360:intron 45.0%
AGAAGATGGGAACATCCCAA+AGG - chr2_1:60557565-60557584 Msa0215360:intron 45.0%
CTCAGTTCTTAAGGGAGACT+CGG + chr2_1:60557690-60557709 None:intergenic 45.0%
AGAACTGAGGAAATGCCTGA+AGG - chr2_1:60557701-60557720 Msa0215360:CDS 45.0%
GAACTGAGGAAATGCCTGAA+GGG - chr2_1:60557702-60557721 Msa0215360:CDS 45.0%
CTCAAATTCATTGTCCCAGC+TGG - chr2_1:60557748-60557767 Msa0215360:CDS 45.0%
ATGAAACTGCAGTAAGGGAC+GGG + chr2_1:60557786-60557805 None:intergenic 45.0%
AGTTGCTTACGATGTCAGGA+TGG - chr2_1:60557813-60557832 Msa0215360:CDS 45.0%
ACGATGTCAGGATGGTCTAT+TGG - chr2_1:60557821-60557840 Msa0215360:CDS 45.0%
CGATGTCAGGATGGTCTATT+GGG - chr2_1:60557822-60557841 Msa0215360:CDS 45.0%
!! GGTCTATTGGGAAGCATCAA+CGG - chr2_1:60557834-60557853 Msa0215360:CDS 45.0%
TGTAACATATGGAGGCCGTA+AGG - chr2_1:60557970-60557989 Msa0215360:intron 45.0%
!! AAAGGTCGGTGCTCTGAAAA+GGG - chr2_1:60558141-60558160 Msa0215360:intron 45.0%
TTCTCCAAGGCTGAATCAAC+TGG + chr2_1:60558259-60558278 None:intergenic 45.0%
AGTGTGAGACGTATTCTCCA+AGG + chr2_1:60558272-60558291 None:intergenic 45.0%
AAGAGTCGCAGAAAATGGCT+TGG + chr2_1:60558315-60558334 None:intergenic 45.0%
CAATGCACAAGCAGGTAAAG+AGG + chr2_1:60558506-60558525 None:intergenic 45.0%
CTCTTTACCTGCTTGTGCAT+TGG - chr2_1:60558504-60558523 Msa0215360:intron 45.0%
AGAGGGGAGGAAAATCTCAA+TGG - chr2_1:60558690-60558709 Msa0215360:intron 45.0%
TTGATCCCAGTATGTCACTG+TGG + chr2_1:60558825-60558844 None:intergenic 45.0%
GAGCTAAATCCGGCAAATCA+AGG - chr2_1:60559121-60559140 Msa0215360:intron 45.0%
GCTAAATCCGGCAAATCAAG+GGG - chr2_1:60559123-60559142 Msa0215360:intron 45.0%
!! TCTCAAACCCCTTGATTTGC+CGG + chr2_1:60559133-60559152 None:intergenic 45.0%
CTGCCAAGGAATCCTTGTAA+TGG - chr2_1:60559186-60559205 Msa0215360:intron 45.0%
CCTCCATTACAAGGATTCCT+TGG + chr2_1:60559192-60559211 None:intergenic 45.0%
CCAAGGAATCCTTGTAATGG+AGG - chr2_1:60559189-60559208 Msa0215360:intron 45.0%
TTGTGCTTCCCTCCATTACA+AGG + chr2_1:60559201-60559220 None:intergenic 45.0%
! GAGGGAAGCACAATATGGAT+GGG - chr2_1:60559208-60559227 Msa0215360:intron 45.0%
GTCCTGGTTGATTGAGAATG+AGG - chr2_1:60559263-60559282 Msa0215360:intron 45.0%
GACCTCATTCTCAATCAACC+AGG + chr2_1:60559268-60559287 None:intergenic 45.0%
GATGGCAAGATCACCAAAGA+CGG - chr2_1:60559345-60559364 Msa0215360:intron 45.0%
ATTCAGCTGACCAAGCTTGA+AGG + chr2_1:60559497-60559516 None:intergenic 45.0%
CAAGCCAGGTGAAAAGTAGA+GGG + chr2_1:60559633-60559652 None:intergenic 45.0%
ACAAGCCAGGTGAAAAGTAG+AGG + chr2_1:60559634-60559653 None:intergenic 45.0%
CAAACCTGCTATTGAGTGGT+TGG - chr2_1:60559770-60559789 Msa0215360:intron 45.0%
ACAAGCGATATGGCCTATGA+TGG + chr2_1:60559973-60559992 None:intergenic 45.0%
CTCTCTTGATATAGACCTGC+TGG - chr2_1:60560171-60560190 Msa0215360:intron 45.0%
AGCAATTCATTCATGCCAGC+AGG + chr2_1:60560189-60560208 None:intergenic 45.0%
!! TGTGTCATTCTTCTGAGGCA+GGG + chr2_1:60560354-60560373 None:intergenic 45.0%
!! ATGTGTCATTCTTCTGAGGC+AGG + chr2_1:60560355-60560374 None:intergenic 45.0%
TATGCAGTACCAGTTGCCAT+CGG + chr2_1:60560405-60560424 None:intergenic 45.0%
AACTGCACTTGTCGGATTTG+TGG - chr2_1:60560425-60560444 Msa0215360:intron 45.0%
! AAGGAGCTGTTTCAGACACT+TGG - chr2_1:60561010-60561029 Msa0215360:CDS 45.0%
TTGTAGTCAAAGTTGTCGGG+AGG - chr2_1:60561035-60561054 Msa0215360:CDS 45.0%
TGAAGTGTGGACAAATGCAC+TGG - chr2_1:60561507-60561526 Msa0215360:CDS 45.0%
CACACAGTAGAAGAGTAGAG+TGG + chr2_1:60561534-60561553 None:intergenic 45.0%
! GGTATTCGCTTGGTGGAATA+AGG - chr2_1:60561811-60561830 Msa0215360:CDS 45.0%
TCGGTATCAAAGCTAGTCAC+TGG - chr2_1:60561901-60561920 Msa0215360:CDS 45.0%
! TAGTCACTGGCTGCTTGAAA+AGG - chr2_1:60561914-60561933 Msa0215360:CDS 45.0%
! AGTCACTGGCTGCTTGAAAA+GGG - chr2_1:60561915-60561934 Msa0215360:CDS 45.0%
GCACTCTACGACTCTTTACT+CGG + chr2_1:60561969-60561988 None:intergenic 45.0%
!!! CGATAGCTAGCTTTTAAGGG+AGG - chr2_1:60562118-60562137 Msa0215360:CDS 45.0%
AGAAAATCAGGGACAGCAGA+TGG - chr2_1:60562302-60562321 Msa0215360:CDS 45.0%
GTCTCGAAGTTAGTACGCTA+CGG + chr2_1:60562423-60562442 None:intergenic 45.0%
!! GACGACTTTTTGGTATGTGC+AGG - chr2_1:60562516-60562535 Msa0215360:CDS 45.0%
TGTACTCTCCAATCTCAGGT+TGG - chr2_1:60562544-60562563 Msa0215360:CDS 45.0%
GTACTCTCCAATCTCAGGTT+GGG - chr2_1:60562545-60562564 Msa0215360:CDS 45.0%
TAACTAGCCCAACCTGAGAT+TGG + chr2_1:60562555-60562574 None:intergenic 45.0%
!! TATGCATCTAAGAAGCGTCC+AGG + chr2_1:60562599-60562618 None:intergenic 45.0%
AGCTGTTGCCCTTACAATCA+TGG - chr2_1:60562684-60562703 Msa0215360:CDS 45.0%
TGTTGCCCTTACAATCATGG+AGG - chr2_1:60562687-60562706 Msa0215360:CDS 45.0%
! AGGGTTTTACACAGTGGTGT+TGG - chr2_1:60562965-60562984 Msa0215360:CDS 45.0%
! CACAGTGGTGTTGGAAAAAC+AGG - chr2_1:60562974-60562993 Msa0215360:CDS 45.0%
TACTTGTTTGCAGAGTGCAC+GGG - chr2_1:60563274-60563293 Msa0215360:CDS 45.0%
!! AATCAGAGGCATCTCTGCAA+CGG + chr2_1:60563304-60563323 None:intergenic 45.0%
CTCTGATTGCAACTTGCAGT+CGG - chr2_1:60563316-60563335 Msa0215360:CDS 45.0%
TGTTTCAGTTTCACCCCAGT+TGG - chr2_1:60563450-60563469 Msa0215360:CDS 45.0%
!! AGGGAGTGTTAATCCAACTG+GGG + chr2_1:60563466-60563485 None:intergenic 45.0%
!! CAAGGGAGTGTTAATCCAAC+TGG + chr2_1:60563468-60563487 None:intergenic 45.0%
AGCAGTGCACTTTCTGTTAC+TGG - chr2_1:60563564-60563583 Msa0215360:five_prime_UTR 45.0%
GCAGTGCACTTTCTGTTACT+GGG - chr2_1:60563565-60563584 Msa0215360:five_prime_UTR 45.0%
TGTTACTGGGCAAAATTGCG+TGG - chr2_1:60563578-60563597 Msa0215360:five_prime_UTR 45.0%
GTTACTGGGCAAAATTGCGT+GGG - chr2_1:60563579-60563598 Msa0215360:five_prime_UTR 45.0%
TTGCGTGGGTCTCATTAAAC+AGG - chr2_1:60563593-60563612 Msa0215360:five_prime_UTR 45.0%
TGCGTGGGTCTCATTAAACA+GGG - chr2_1:60563594-60563613 Msa0215360:five_prime_UTR 45.0%
TGGGTCTCATTAAACAGGGA+GGG - chr2_1:60563598-60563617 Msa0215360:five_prime_UTR 45.0%
TCTCATTAAACAGGGAGGGA+TGG - chr2_1:60563602-60563621 Msa0215360:five_prime_UTR 45.0%
!! CGTTTTTCAATGTCGCCTAC+AGG + chr2_1:60563916-60563935 None:intergenic 45.0%
AAAGTAGGTACCTGCTCTGA+AGG - chr2_1:60564317-60564336 Msa0215360:five_prime_UTR 45.0%
TATGTCCATTCCTTCAGAGC+AGG + chr2_1:60564330-60564349 None:intergenic 45.0%
GAATCATTGCCGCTAGATGT+TGG - chr2_1:60564353-60564372 Msa0215360:five_prime_UTR 45.0%
!! GGTTGATTTTTGCAGTCCAC+AGG + chr2_1:60564422-60564441 None:intergenic 45.0%
! AAAGATGGCACTGAATCTGG+TGG - chr2_1:60564605-60564624 Msa0215360:five_prime_UTR 45.0%
! GTGTCGTGCAAGACATTTTC+AGG - chr2_1:60564701-60564720 Msa0215360:five_prime_UTR 45.0%
!!! ATTGTTTTATTTATTTATTT+TGG - chr2_1:60559742-60559761 Msa0215360:intron 5.0%
!!! TTGTTTTATTTATTTATTTT+GGG - chr2_1:60559743-60559762 Msa0215360:intron 5.0%
!!! TTTTTTTTGAATAAATAAAA+CGG - chr2_1:60560704-60560723 Msa0215360:intron 5.0%
! GAATCTGAGTTGGGTAGGGT+AGG - chr2_1:60555739-60555758 Msa0215360:CDS 50.0%
! TGAGTTGGGTAGGGTAGGAT+TGG - chr2_1:60555744-60555763 Msa0215360:CDS 50.0%
CCAATGCAGTCTACGAATCC+AGG + chr2_1:60556472-60556491 None:intergenic 50.0%
CCTGGATTCGTAGACTGCAT+TGG - chr2_1:60556469-60556488 Msa0215360:CDS 50.0%
!! GATCGTCAACCAGGGCATTT+TGG - chr2_1:60556820-60556839 Msa0215360:intron 50.0%
GCATTCCAATGAGACTGCTC+TGG - chr2_1:60557223-60557242 Msa0215360:intron 50.0%
TGTAGCAGCACAAGTCAGGT+TGG + chr2_1:60557396-60557415 None:intergenic 50.0%
AGTCTGTAGCAGCACAAGTC+AGG + chr2_1:60557400-60557419 None:intergenic 50.0%
AGATGGGAACATCCCAAAGG+AGG - chr2_1:60557568-60557587 Msa0215360:intron 50.0%
AGTTGCTTCTCCTGTATCCC+AGG - chr2_1:60557607-60557626 Msa0215360:intron 50.0%
CGAGTCTCCCTTAAGAACTG+AGG - chr2_1:60557688-60557707 Msa0215360:CDS 50.0%
TGAAACTGCAGTAAGGGACG+GGG + chr2_1:60557785-60557804 None:intergenic 50.0%
GTGCAGTTGCTTACGATGTC+AGG - chr2_1:60557809-60557828 Msa0215360:CDS 50.0%
CATATGGAGGCCGTAAGGAA+TGG - chr2_1:60557975-60557994 Msa0215360:intron 50.0%
!! GAAAGGTCGGTGCTCTGAAA+AGG - chr2_1:60558140-60558159 Msa0215360:intron 50.0%
!! AAGGTCGGTGCTCTGAAAAG+GGG - chr2_1:60558142-60558161 Msa0215360:intron 50.0%
!! TGCTCTGAAAAGGGGAGAAG+AGG - chr2_1:60558150-60558169 Msa0215360:intron 50.0%
! TGCTCCAGTTGATTCAGCCT+TGG - chr2_1:60558252-60558271 Msa0215360:intron 50.0%
AAATCGGTCCGAATGCAGTG+AGG - chr2_1:60558666-60558685 Msa0215360:intron 50.0%
TCCGAATGCAGTGAGGAAGA+GGG - chr2_1:60558673-60558692 Msa0215360:intron 50.0%
GATCAGGTGCAGTCACTGAA+TGG - chr2_1:60558853-60558872 Msa0215360:intron 50.0%
ATGTGGCACTCAGACTGTGT+TGG - chr2_1:60558882-60558901 Msa0215360:intron 50.0%
AAAGCCATAAAGGCCGTTGC+AGG - chr2_1:60559160-60559179 Msa0215360:intron 50.0%
! GGAGGGAAGCACAATATGGA+TGG - chr2_1:60559207-60559226 Msa0215360:intron 50.0%
CACTTTGCCTCCTTCAAGCT+TGG - chr2_1:60559484-60559503 Msa0215360:intron 50.0%
GGTCAGCTGAATACAAAGCC+AGG - chr2_1:60559505-60559524 Msa0215360:intron 50.0%
!! CTGTCCCTCTACTTTTCACC+TGG - chr2_1:60559626-60559645 Msa0215360:intron 50.0%
ATGCAGTACCAGTTGCCATC+GGG + chr2_1:60560404-60560423 None:intergenic 50.0%
TTAACTAGGGAAGGGCTGAC+CGG - chr2_1:60561938-60561957 Msa0215360:CDS 50.0%
GACTCTTTACTCGGCCTTTC+CGG + chr2_1:60561960-60561979 None:intergenic 50.0%
TCTGAGAGCCTACATCTCAG+TGG + chr2_1:60561994-60562013 None:intergenic 50.0%
ACTGAGATGTAGGCTCTCAG+AGG - chr2_1:60561993-60562012 Msa0215360:CDS 50.0%
GCAGTGCTACGATAGGAACT+TGG - chr2_1:60562015-60562034 Msa0215360:CDS 50.0%
ACTGGGCAGAATGAACCTTC+TGG + chr2_1:60562630-60562649 None:intergenic 50.0%
AGAAGGTTCATTCTGCCCAG+TGG - chr2_1:60562629-60562648 Msa0215360:CDS 50.0%
!! TGCCTTTAGGGCAAACCACT+GGG + chr2_1:60562647-60562666 None:intergenic 50.0%
CGACTGCAAGTTGCAATCAG+AGG + chr2_1:60563318-60563337 None:intergenic 50.0%
GTGGGTCTCATTAAACAGGG+AGG - chr2_1:60563597-60563616 Msa0215360:five_prime_UTR 50.0%
GCTTGTGGTATCAGCCATTC+CGG - chr2_1:60563852-60563871 Msa0215360:intron 50.0%
GGTATCAGCCATTCCGGATT+TGG - chr2_1:60563858-60563877 Msa0215360:intron 50.0%
ATCAGCCATTCCGGATTTGG+TGG - chr2_1:60563861-60563880 Msa0215360:intron 50.0%
AGTCTCCACCAAATCCGGAA+TGG + chr2_1:60563869-60563888 None:intergenic 50.0%
!! TTCCGGATTTGGTGGAGACT+TGG - chr2_1:60563869-60563888 Msa0215360:intron 50.0%
GTCCAAGTCTCCACCAAATC+CGG + chr2_1:60563874-60563893 None:intergenic 50.0%
TTTGGTGGAGACTTGGACCA+AGG - chr2_1:60563876-60563895 Msa0215360:intron 50.0%
TTGGTGGAGACTTGGACCAA+GGG - chr2_1:60563877-60563896 Msa0215360:intron 50.0%
AGGTACGAATCCAAAGCCCT+TGG + chr2_1:60563896-60563915 None:intergenic 50.0%
!! GGCTTTGGATTCGTACCTGT+AGG - chr2_1:60563898-60563917 Msa0215360:intron 50.0%
!! AGGTACCTGCTCTGAAGGAA+TGG - chr2_1:60564322-60564341 Msa0215360:five_prime_UTR 50.0%
TGACTTAGCACCAACTCCGT+TGG + chr2_1:60564390-60564409 None:intergenic 50.0%
TAAGTCAGAGTGTGAGCCTG+TGG - chr2_1:60564403-60564422 Msa0215360:five_prime_UTR 50.0%
ACACCCCAGAGCAGTCTCAT+TGG + chr2_1:60557231-60557250 None:intergenic 55.0%
TCCTGTATCCCAGGAGAGCT+CGG - chr2_1:60557616-60557635 Msa0215360:intron 55.0%
ATTGTCCCAGCTGGACCAAG+AGG - chr2_1:60557757-60557776 Msa0215360:CDS 55.0%
!! GGAAGCATCAACGGCCTTCT+AGG - chr2_1:60557843-60557862 Msa0215360:CDS 55.0%
AGCATCAACGGCCTTCTAGG+CGG - chr2_1:60557846-60557865 Msa0215360:CDS 55.0%
GTGCTACCCAATGCACAAGC+AGG + chr2_1:60558514-60558533 None:intergenic 55.0%
GTCCGAATGCAGTGAGGAAG+AGG - chr2_1:60558672-60558691 Msa0215360:intron 55.0%
CCCCTCTTCCTCACTGCATT+CGG + chr2_1:60558677-60558696 None:intergenic 55.0%
CCGAATGCAGTGAGGAAGAG+GGG - chr2_1:60558674-60558693 Msa0215360:intron 55.0%
AATGCAGTGAGGAAGAGGGG+AGG - chr2_1:60558677-60558696 Msa0215360:intron 55.0%
GCAACCTGCAACGGCCTTTA+TGG + chr2_1:60559167-60559186 None:intergenic 55.0%
TCCTTGGCAGCAACCTGCAA+CGG + chr2_1:60559176-60559195 None:intergenic 55.0%
GGGAAAGGACTCTCTTGTCC+TGG - chr2_1:60559247-60559266 Msa0215360:intron 55.0%
CAGCTGACCAAGCTTGAAGG+AGG + chr2_1:60559494-60559513 None:intergenic 55.0%
GATGATTCGTGCGGGATGTG+CGG - chr2_1:60559573-60559592 Msa0215360:intron 55.0%
TCCAGGGTTTCACGCAGGAA+GGG + chr2_1:60559864-60559883 None:intergenic 55.0%
CTATCTCCAGGGTTTCACGC+AGG + chr2_1:60559869-60559888 None:intergenic 55.0%
GTACATCAGGAGATCCCCGA+TGG - chr2_1:60560386-60560405 Msa0215360:intron 55.0%
TGCAGTACCAGTTGCCATCG+GGG + chr2_1:60560403-60560422 None:intergenic 55.0%
TGTCCCCAAAGCTTAGGCAG+TGG - chr2_1:60561479-60561498 Msa0215360:CDS 55.0%
GTCCCCAAAGCTTAGGCAGT+GGG - chr2_1:60561480-60561499 Msa0215360:CDS 55.0%
TCCCCAAAGCTTAGGCAGTG+GGG - chr2_1:60561481-60561500 Msa0215360:CDS 55.0%
! ACTAGAATGGGGGCATGGCA+AGG - chr2_1:60561573-60561592 Msa0215360:CDS 55.0%
GAGTGCAGCCACTGAGATGT+AGG - chr2_1:60561983-60562002 Msa0215360:CDS 55.0%
CTCAGAGGCAGTGCTACGAT+AGG - chr2_1:60562008-60562027 Msa0215360:CDS 55.0%
AAGTTGCTGATGGCTTCGCC+TGG - chr2_1:60562578-60562597 Msa0215360:CDS 55.0%
! TGCCCAGTGGTTTGCCCTAA+AGG - chr2_1:60562642-60562661 Msa0215360:CDS 55.0%
!! CTGCCTTTAGGGCAAACCAC+TGG + chr2_1:60562648-60562667 None:intergenic 55.0%
CCTCTTCGATTGAGCTCACG+AGG + chr2_1:60563368-60563387 None:intergenic 55.0%
CCTCGTGAGCTCAATCGAAG+AGG - chr2_1:60563365-60563384 Msa0215360:CDS 55.0%
GAGACTTGGACCAAGGGCTT+TGG - chr2_1:60563883-60563902 Msa0215360:intron 55.0%
GCTGCGTTCCCAACATCTAG+CGG + chr2_1:60564365-60564384 None:intergenic 55.0%
GTTGGGAACGCAGCTACCAA+CGG - chr2_1:60564371-60564390 Msa0215360:five_prime_UTR 55.0%
AACGCAGCTACCAACGGAGT+TGG - chr2_1:60564377-60564396 Msa0215360:five_prime_UTR 55.0%
TCACTGTCGGCCCTATTGTC+TGG + chr2_1:60564443-60564462 None:intergenic 55.0%
CCTGTTTGCCGAGCTCTCCT+GGG + chr2_1:60557627-60557646 None:intergenic 60.0%
GGGATCCTCTTGGTCCAGCT+GGG + chr2_1:60557765-60557784 None:intergenic 60.0%
GTAAGGGACGGGGATCCTCT+TGG + chr2_1:60557775-60557794 None:intergenic 60.0%
ATCAACGGCCTTCTAGGCGG+TGG - chr2_1:60557849-60557868 Msa0215360:CDS 60.0%
GACTCCATCCACCGCCTAGA+AGG + chr2_1:60557860-60557879 None:intergenic 60.0%
ACATAGCAGCGGTCTCTGGC+TGG + chr2_1:60558066-60558085 None:intergenic 60.0%
GCCAGAGACCGCTGCTATGT+TGG - chr2_1:60558066-60558085 Msa0215360:intron 60.0%
GCCAACATAGCAGCGGTCTC+TGG + chr2_1:60558070-60558089 None:intergenic 60.0%
CCTGAGCGGACAAACAAGCC+AGG + chr2_1:60559647-60559666 None:intergenic 60.0%
!! CCTGGCTTGTTTGTCCGCTC+AGG - chr2_1:60559644-60559663 Msa0215360:intron 60.0%
CCGAGTGCAACTGACCTGAG+CGG + chr2_1:60559661-60559680 None:intergenic 60.0%
CCGCTCAGGTCAGTTGCACT+CGG - chr2_1:60559658-60559677 Msa0215360:intron 60.0%
TCCCTTCCTGCGTGAAACCC+TGG - chr2_1:60559860-60559879 Msa0215360:intron 60.0%
CTCCAGGGTTTCACGCAGGA+AGG + chr2_1:60559865-60559884 None:intergenic 60.0%
AGGAGATCCCCGATGGCAAC+TGG - chr2_1:60560393-60560412 Msa0215360:intron 60.0%
CCCCCACTGCCTAAGCTTTG+GGG + chr2_1:60561485-60561504 None:intergenic 60.0%
CCCCAAAGCTTAGGCAGTGG+GGG - chr2_1:60561482-60561501 Msa0215360:CDS 60.0%
GCCCCCACTGCCTAAGCTTT+GGG + chr2_1:60561486-60561505 None:intergenic 60.0%
TGCCCCCACTGCCTAAGCTT+TGG + chr2_1:60561487-60561506 None:intergenic 60.0%
TAGGGAAGGGCTGACCGGAA+AGG - chr2_1:60561943-60561962 Msa0215360:CDS 60.0%
GGGAGGATTCCCCAAGTCCT+TGG - chr2_1:60562135-60562154 Msa0215360:CDS 60.0%
TGCAGTCGGTATCGTCGCCA+AGG - chr2_1:60563330-60563349 Msa0215360:CDS 60.0%
CGATTGAGCTCACGAGGCGT+CGG + chr2_1:60563362-60563381 None:intergenic 60.0%
GCCGAGCTCTCCTGGGATAC+AGG + chr2_1:60557620-60557639 None:intergenic 65.0%
CCCAGGAGAGCTCGGCAAAC+AGG - chr2_1:60557624-60557643 Msa0215360:intron 65.0%
GCCTGTTTGCCGAGCTCTCC+TGG + chr2_1:60557628-60557647 None:intergenic 65.0%
GGGGATCCTCTTGGTCCAGC+TGG + chr2_1:60557766-60557785 None:intergenic 65.0%
ACGGCCTTCTAGGCGGTGGA+TGG - chr2_1:60557853-60557872 Msa0215360:CDS 65.0%
GCCGTTGCAGGTTGCTGCCA+AGG - chr2_1:60559172-60559191 Msa0215360:intron 65.0%
! GGCAGTGGGGGCATGAAGTG+TGG - chr2_1:60561494-60561513 Msa0215360:CDS 65.0%
!! CGAGGCGTCGGCACATTCCT+TGG + chr2_1:60563350-60563369 None:intergenic 65.0%
TTCGTGCGGGATGTGCGGCG+AGG - chr2_1:60559578-60559597 Msa0215360:intron 70.0%
TCGTGCGGGATGTGCGGCGA+GGG - chr2_1:60559579-60559598 Msa0215360:intron 70.0%
TGCGGGATGTGCGGCGAGGG+AGG - chr2_1:60559582-60559601 Msa0215360:intron 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 60555422 60565026 60555422 ID=Msa0215360;Name=Msa0215360
chr2_1 mRNA 60555422 60565026 60555422 ID=Msa0215360-mRNA-1;Parent=Msa0215360;Name=Msa0215360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=1152|1|1|1|0.87|0.77|9|212|1352
chr2_1 exon 60555422 60556172 60555422 ID=Msa0215360-mRNA-1:exon:16641;Parent=Msa0215360-mRNA-1
chr2_1 exon 60556430 60556622 60556430 ID=Msa0215360-mRNA-1:exon:16640;Parent=Msa0215360-mRNA-1
chr2_1 exon 60557062 60557161 60557062 ID=Msa0215360-mRNA-1:exon:16639;Parent=Msa0215360-mRNA-1
chr2_1 exon 60557424 60557510 60557424 ID=Msa0215360-mRNA-1:exon:16638;Parent=Msa0215360-mRNA-1
chr2_1 exon 60557669 60557910 60557669 ID=Msa0215360-mRNA-1:exon:16637;Parent=Msa0215360-mRNA-1
chr2_1 exon 60559392 60559474 60559392 ID=Msa0215360-mRNA-1:exon:16636;Parent=Msa0215360-mRNA-1
chr2_1 exon 60559930 60560053 60559930 ID=Msa0215360-mRNA-1:exon:16635;Parent=Msa0215360-mRNA-1
chr2_1 exon 60560783 60563735 60560783 ID=Msa0215360-mRNA-1:exon:16634;Parent=Msa0215360-mRNA-1
chr2_1 exon 60564137 60565026 60564137 ID=Msa0215360-mRNA-1:exon:16633;Parent=Msa0215360-mRNA-1
chr2_1 five_prime_UTR 60564137 60565026 60564137 ID=Msa0215360-mRNA-1:five_prime_utr;Parent=Msa0215360-mRNA-1
chr2_1 five_prime_UTR 60563474 60563735 60563474 ID=Msa0215360-mRNA-1:five_prime_utr;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60560783 60563473 60560783 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60559930 60560053 60559930 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60559392 60559474 60559392 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60557669 60557910 60557669 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60557424 60557510 60557424 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60557062 60557161 60557062 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60556430 60556622 60556430 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 CDS 60555634 60556172 60555634 ID=Msa0215360-mRNA-1:cds;Parent=Msa0215360-mRNA-1
chr2_1 three_prime_UTR 60555422 60555633 60555422 ID=Msa0215360-mRNA-1:three_prime_utr;Parent=Msa0215360-mRNA-1
Gene Sequence

>Msa0215360

ATGGAACATTTATGCGATGATAACTTTGAAGGATCTAATGAAGAAAGACAGATTTTTACAGAGGTCTTTTTTGGTGATGACACTTTTCAGTCTAGTCAGAGGCGTGTTATTTCTGGAGCCATCAACCTTGAACATGAATCCACGAAAAACACATTTAAGTCATTTGGCTCTAGTAATGAAAACTCGGTCATATGGCGTCCCTCGTCTTCAAGATTTACCCATCCTGAGGAGGACATTAATGCAATTCAGCATTCCAATGAGACTGCTCTGGGGTGTTTGCCAGAGAGTTTAACTTGTGAAGATCAGAATGATGAAAATGTAAATGTCAAACGTATGAAATTTTCTCTGCACGAACTTCCTTGTAGTACATCTAATTCAGATGTTTTGGGTTCATCTGGAATTCCAAAAGTAGTAATTTCCAACCTGACTTGTGCTGCTACAGACTGTGATAGTGACTCGATTGCATTTCGTACAGTTGAATCATCTAAACACGGTGTGATATCTAGTTGCTATGTATTGAAGCATAACTTGGTACAGAAAATTCATGCTTCTAATGATGATGCAGATGTTACAAATTGTAAATCTAAAACAGAAGATGGGAACATCCCAAAGGAGGTGTCTGTAAGTAAGGCAGTTGCTTCTCCTGTATCCCAGGAGAGCTCGGCAAACAGGCTAGTAGTGACGAGTCCAGCAATCACTGTTGTGAAGAAGTCCGAGTCTCCCTTAAGAACTGAGGAAATGCCTGAAGGGTTTCAATCTTCTAATATGGTTATCTCAAATTCATTGTCCCAGCTGGACCAAGAGGATCCCCGTCCCTTACTGCAGTTTCATATCGTGCAGTTGCTTACGATGTCAGGATGGTCTATTGGGAAGCATCAACGGCCTTCTAGGCGGTGGATGGAGTCATTCTACAAGACACCAAAGGGAAAAATTATGCGGGAATTTACAAAAGTTTGGAGATTATGTGGCCAACTTTTGTCTGTTGAAAAGTGCAATGTAACATATGGAGGCCGTAAGGAATGGACCAATATTAGCGATTTTTGGTCCGATCTATCGAGTGCACTGAAAAATGTTGAAAAATTAAAAAACCAGCCAGAGACCGCTGCTATGTTGGCTTATCAATGGTGGATTATGGATCCTTTTGTAGTAGTTATACATTTTGATAGAAAGGTCGGTGCTCTGAAAAGGGGAGAAGAGGTTATAAAAGCAAGTTGTAGCTTAGTTTCTAGTAAGGGTAAAATGGCATATTCTTCTAAAAAAAAGGGTAAAATGGCATATGCTCCAGTTGATTCAGCCTTGGAGAATACGTCTCACACTCTTTCTGAACAAAAGCACGACCAAGCCATTTTCTGCGACTCTTCAACAGCCACCAGAACCACAGAAATATCTGCTTTTATGATAAACAGTCATGCTTGTAAACAGACATCTGACGGTAACCAAGAAGATATGTATGTCGAAGAACATAAACCAAACATCATAGAGAACCGATTAATGGAAATGTCAGTGAGCAAAAGTAGTATGGATCTAGCCTCTTTACCTGCTTGTGCATTGGGTAGCACTGTTACCCATTCAAGTGCTTCCTCTTTTGATGTTCTTACAAGCTCTGGAAATTTGGACTCGGAATCTAAAATGAATGCTGTTCATCAAGCTAAACTTAGAAATTCTAAAAGCTTTGATAAGCACGCATCAGAAAATCGGTCCGAATGCAGTGAGGAAGAGGGGAGGAAAATCTCAATGGCTTGTGTTTTTGGGAAAGATAGTACATGGTCTTCCTCTAATGGTATTCTTAAAAAGAAAATGCGGAAGAAGTGCAAAAGGATATCTCAAATCAAACCGAGTATGTTATACCACAGTGACATACTGGGATCAACTATTACTGATCAGGTGCAGTCACTGAATGGTGATGTATGTGGCACTCAGACTGTGTTGGAAGAAGTTCAAGATTATGTAGTTGACAGTGTGGGAAAAAAAAGGAACAAGAAGAAGTTATCAGGCAGTGCAAACCAGCGACATATTAAGAAAACAAACTACTCTATTACTAAAACAAATAAGTCCAATAGATGCCATATTGAAGATGACGATCTATTAGTGTCAGCAATACTCAAGAATAAGGACTTCAACCCAAAGATAATCCGAGGTAAATCTAGAGCTAAATCCGGCAAATCAAGGGGTTTGAGAAAGCTTAAAAGCCATAAAGGCCGTTGCAGGTTGCTGCCAAGGAATCCTTGTAATGGAGGGAAGCACAATATGGATGGGAAGAAGTATTATCTTGGGGAAAGGACTCTCTTGTCCTGGTTGATTGAGAATGAGGTCATATGTTTAAATGATATCGTTCAATACCGAAACCCTAAAGATAATTCTGTCACTAAGGATGGCAAGATCACCAAAGACGGTATTGTTTGTAAGTGTTGTGGTAAGGTGCTTACATTATCAGAGTTCAAGATTCATGCTGGGTTTACACTGAGTCGCCCTTGCTTGAATCTTTTCATGAAGTCTGGTGAGCCCTTTACACTTTGCCTCCTTCAAGCTTGGTCAGCTGAATACAAAGCCAGGAAAAGTCAAAATCAAGCTGGGAACATTGTTGATAATGACAGAAATGATGATTCGTGCGGGATGTGCGGCGAGGGAGGTGAGCTGATATGTTGTGATAACTGTCCCTCTACTTTTCACCTGGCTTGTTTGTCCGCTCAGGAGATCCCCGATGGCAACTGGTACTGCATAAACTGCACTTGTCGGATTTGTGGAAATTTGGTCATTGATAAAGAGGTTTCAGATGCACATGATTCATCGCAATGTTCACAATGCGAACATAAATATCACAAGAAATGCCTCGGAGAAAGAGATAAACAAGAAGGAGCTGTTTCAGACACTTGGTTTTGTAGTCAAAGTTGTCGGGAGGTATACTGTACTCTCCAATCTCAGGTTGGGCTAGTTAATCAAGTTGCTGATGGCTTCGCCTGGACGCTTCTTAGATGCATACATGATGACCAGAAGGTTCATTCTGCCCAGTGGTTTGCCCTAAAGGCAGTTTGCAATACAAAATTAGCTGTTGCCCTTACAATCATGGAGGAGTGTTTCGTGTCAATGTTAGATCTAAGAACAGGCATCCACATGATACCCCAAGTTTTATTCAATTGGGGGTCTGATTTTGCTCGTCTGAATTTTCAAGGGTTTTACACAGTGGTGTTGGAAAAACAGGATGTGTTAATATCTGTAGCATCTATCAGAGTGCACGGGACTACCGTTGCAGAGATGCCTCTGATTGCAACTTGCAGTCGGTATCGTCGCCAAGGAATGTGCCGACGCCTCGTGAGCTCAATCGAAGAGATGTTAATATCTGTCAAGGTAGAAAAGCTTGTGGTATCAGCCATTCCGGATTTGGTGGAGACTTGGACCAAGGGCTTTGGATTCGTACCTGTAGGCGACATTGAAAAACGAAGGTTAAAGAAAAACAACTTAATGGTTTTTCCTGGAACAGTGTTACTTGAAAAATCCTTGTATGGCAAGAAGAAAGACGAAGGATTGTGTGATCAATCAACTTTAGCAACAGATGAATCATTCAAAGTAGGTACCTGCTCTGAAGGAATGGACATAGCTGAATCATTGCCGCTAGATGTTGGGAACGCAGCTACCAACGGAGTTGGTGCTAAGTCAGAGTGTGAGCCTGTGGACTGCAAAAATCAACCAGACAATAGGGCCGACAGTGAAATCAGCAGAGATGATAATATTCTAGCCGTTGAAATTGCATTAGGAGATAAAGAATCAACAGAGACAAGTAGGTCTTTCGGTGAAGAGAAAATCACCCCTTTTGAAGGAAACAATGTGGAGGAACCAAGAACAAGTGCCAACAAAGATGGCACTGAATCTGGTGGAAGAGTTTTTGAGGACAAGAATATCAATATAGGTGAAGTAATGGAAAATGATTTGCATGAACATGTTTCAAATGTGTCGTGCAAGACATTTTCAGGCAACAATTTTGACACAGTATCTAATTTTGAATGCTCAGCGATGTATGATGAAACCGTTATTTTTGGTTCACTGGCAAACTCTGCAAATTAG
Protein sequence

>Msa0215360

MEHLCDDNFEGSNEERQIFTEVFFGDDTFQSSQRRVISGAINLEHESTKNTFKSFGSSNENSVIWRPSSSRFTHPEEDINAIQHSNETALGCLPESLTCEDQNDENVNVKRMKFSLHELPCSTSNSDVLGSSGIPKVVISNLTCAATDCDSDSIAFRTVESSKHGVISSCYVLKHNLVQKIHASNDDADVTNCKSKTEDGNIPKEVSVSKAVASPVSQESSANRLVVTSPAITVVKKSESPLRTEEMPEGFQSSNMVISNSLSQLDQEDPRPLLQFHIVQLLTMSGWSIGKHQRPSRRWMESFYKTPKGKIMREFTKVWRLCGQLLSVEKCNVTYGGRKEWTNISDFWSDLSSALKNVEKLKNQPETAAMLAYQWWIMDPFVVVIHFDRKVGALKRGEEVIKASCSLVSSKGKMAYSSKKKGKMAYAPVDSALENTSHTLSEQKHDQAIFCDSSTATRTTEISAFMINSHACKQTSDGNQEDMYVEEHKPNIIENRLMEMSVSKSSMDLASLPACALGSTVTHSSASSFDVLTSSGNLDSESKMNAVHQAKLRNSKSFDKHASENRSECSEEEGRKISMACVFGKDSTWSSSNGILKKKMRKKCKRISQIKPSMLYHSDILGSTITDQVQSLNGDVCGTQTVLEEVQDYVVDSVGKKRNKKKLSGSANQRHIKKTNYSITKTNKSNRCHIEDDDLLVSAILKNKDFNPKIIRGKSRAKSGKSRGLRKLKSHKGRCRLLPRNPCNGGKHNMDGKKYYLGERTLLSWLIENEVICLNDIVQYRNPKDNSVTKDGKITKDGIVCKCCGKVLTLSEFKIHAGFTLSRPCLNLFMKSGEPFTLCLLQAWSAEYKARKSQNQAGNIVDNDRNDDSCGMCGEGGELICCDNCPSTFHLACLSAQEIPDGNWYCINCTCRICGNLVIDKEVSDAHDSSQCSQCEHKYHKKCLGERDKQEGAVSDTWFCSQSCREVYCTLQSQVGLVNQVADGFAWTLLRCIHDDQKVHSAQWFALKAVCNTKLAVALTIMEECFVSMLDLRTGIHMIPQVLFNWGSDFARLNFQGFYTVVLEKQDVLISVASIRVHGTTVAEMPLIATCSRYRRQGMCRRLVSSIEEMLISVKVEKLVVSAIPDLVETWTKGFGFVPVGDIEKRRLKKNNLMVFPGTVLLEKSLYGKKKDEGLCDQSTLATDESFKVGTCSEGMDIAESLPLDVGNAATNGVGAKSECEPVDCKNQPDNRADSEISRDDNILAVEIALGDKESTETSRSFGEEKITPFEGNNVEEPRTSANKDGTESGGRVFEDKNINIGEVMENDLHEHVSNVSCKTFSGNNFDTVSNFECSAMYDETVIFGSLANSAN*