Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862650 | XP_027187359.1 | 89.157 | 249 | 22 | 2 | 1 | 246 | 1 | 247 | 7.81e-161 | 456 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862650 | sp|Q946Y7|SYP61_ARATH | 67.593 | 216 | 66 | 3 | 1 | 215 | 1 | 213 | 2.44e-100 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862650 | A0A3Q7X0P4 | 89.157 | 249 | 22 | 2 | 1 | 246 | 1 | 247 | 3.73e-161 | 456 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007850 | Msa0862650 | 0.811027 | 8.597923e-51 | -8.615850e-47 |
| Msa0012940 | Msa0862650 | 0.800858 | 1.183295e-48 | -8.615850e-47 |
| Msa0030280 | Msa0862650 | 0.812527 | 4.053137e-51 | -8.615850e-47 |
| Msa0031820 | Msa0862650 | 0.818394 | 2.006111e-52 | -8.615850e-47 |
| Msa0033880 | Msa0862650 | 0.841716 | 4.015178e-58 | -8.615850e-47 |
| Msa0077540 | Msa0862650 | 0.810624 | 1.051022e-50 | -8.615850e-47 |
| Msa0100800 | Msa0862650 | 0.805537 | 1.272553e-49 | -8.615850e-47 |
| Msa0101180 | Msa0862650 | 0.803544 | 3.314314e-49 | -8.615850e-47 |
| Msa0108870 | Msa0862650 | 0.808738 | 2.672221e-50 | -8.615850e-47 |
| Msa0609000 | Msa0862650 | 0.802497 | 5.454864e-49 | -8.615850e-47 |
| Msa0633570 | Msa0862650 | 0.819975 | 8.757096e-53 | -8.615850e-47 |
| Msa0644030 | Msa0862650 | 0.808440 | 3.094703e-50 | -8.615850e-47 |
| Msa0647430 | Msa0862650 | 0.815604 | 8.491750e-52 | -8.615850e-47 |
| Msa0659990 | Msa0862650 | 0.807448 | 5.030754e-50 | -8.615850e-47 |
| Msa0687230 | Msa0862650 | 0.813305 | 2.737599e-51 | -8.615850e-47 |
| Msa0694990 | Msa0862650 | 0.803255 | 3.803249e-49 | -8.615850e-47 |
| Msa0705390 | Msa0862650 | 0.802931 | 4.438487e-49 | -8.615850e-47 |
| Msa0706390 | Msa0862650 | 0.807549 | 4.787613e-50 | -8.615850e-47 |
| Msa0735310 | Msa0862650 | 0.811292 | 7.531580e-51 | -8.615850e-47 |
| Msa0739080 | Msa0862650 | 0.817501 | 3.191257e-52 | -8.615850e-47 |
| Msa0742510 | Msa0862650 | 0.937200 | 5.094184e-98 | -8.615850e-47 |
| Msa0743530 | Msa0862650 | 0.825227 | 5.258240e-54 | -8.615850e-47 |
| Msa0744090 | Msa0862650 | 0.818691 | 1.717726e-52 | -8.615850e-47 |
| Msa0744100 | Msa0862650 | 0.823083 | 1.676624e-53 | -8.615850e-47 |
| Msa0745200 | Msa0862650 | 0.827171 | 1.813205e-54 | -8.615850e-47 |
| Msa0749400 | Msa0862650 | 0.803919 | 2.769550e-49 | -8.615850e-47 |
| Msa0756930 | Msa0862650 | 0.804784 | 1.828967e-49 | -8.615850e-47 |
| Msa0758540 | Msa0862650 | 0.812003 | 5.274171e-51 | -8.615850e-47 |
| Msa0774750 | Msa0862650 | 0.813349 | 2.676954e-51 | -8.615850e-47 |
| Msa0779550 | Msa0862650 | 0.917225 | 6.878720e-86 | -8.615850e-47 |
| Msa0780880 | Msa0862650 | 0.803013 | 4.268651e-49 | -8.615850e-47 |
| Msa0781270 | Msa0862650 | 0.835954 | 1.241927e-56 | -8.615850e-47 |
| Msa0785130 | Msa0862650 | 0.818278 | 2.131064e-52 | -8.615850e-47 |
| Msa0788110 | Msa0862650 | 0.804087 | 2.556512e-49 | -8.615850e-47 |
| Msa0788120 | Msa0862650 | 0.818870 | 1.564370e-52 | -8.615850e-47 |
| Msa0795660 | Msa0862650 | 0.830977 | 2.167074e-55 | -8.615850e-47 |
| Msa0814250 | Msa0862650 | 0.810526 | 1.103332e-50 | -8.615850e-47 |
| Msa0818170 | Msa0862650 | 0.805762 | 1.141654e-49 | -8.615850e-47 |
| Msa0818770 | Msa0862650 | 0.832275 | 1.037505e-55 | -8.615850e-47 |
| Msa0819540 | Msa0862650 | 0.833163 | 6.243250e-56 | -8.615850e-47 |
| Msa0822170 | Msa0862650 | 0.837201 | 5.978060e-57 | -8.615850e-47 |
| Msa0822180 | Msa0862650 | 0.813742 | 2.194780e-51 | -8.615850e-47 |
| Msa0823570 | Msa0862650 | 0.864930 | 8.527750e-65 | -8.615850e-47 |
| Msa0825270 | Msa0862650 | 0.832729 | 8.003557e-56 | -8.615850e-47 |
| Msa0825280 | Msa0862650 | 0.820408 | 6.970288e-53 | -8.615850e-47 |
| Msa0826510 | Msa0862650 | 0.839338 | 1.681995e-57 | -8.615850e-47 |
| Msa0832820 | Msa0862650 | 0.803463 | 3.444238e-49 | -8.615850e-47 |
| Msa0126770 | Msa0862650 | 0.845935 | 2.977365e-59 | -8.615850e-47 |
| Msa0126840 | Msa0862650 | 0.805089 | 1.579388e-49 | -8.615850e-47 |
| Msa0127040 | Msa0862650 | 0.818521 | 1.877261e-52 | -8.615850e-47 |
| Msa0127850 | Msa0862650 | 0.835588 | 1.537706e-56 | -8.615850e-47 |
| Msa0131450 | Msa0862650 | 0.802034 | 6.793069e-49 | -8.615850e-47 |
| Msa0138360 | Msa0862650 | 0.806116 | 9.617741e-50 | -8.615850e-47 |
| Msa0147980 | Msa0862650 | 0.824589 | 7.436660e-54 | -8.615850e-47 |
| Msa0166750 | Msa0862650 | 0.809931 | 1.482625e-50 | -8.615850e-47 |
| Msa0171850 | Msa0862650 | 0.844038 | 9.680986e-59 | -8.615850e-47 |
| Msa0174000 | Msa0862650 | 0.850323 | 1.828940e-60 | -8.615850e-47 |
| Msa0193600 | Msa0862650 | 0.801003 | 1.105032e-48 | -8.615850e-47 |
| Msa0215360 | Msa0862650 | 0.817750 | 2.804616e-52 | -8.615850e-47 |
| Msa0221600 | Msa0862650 | 0.802960 | 4.378675e-49 | -8.615850e-47 |
| Msa0384670 | Msa0862650 | 0.814653 | 1.380475e-51 | -8.615850e-47 |
| Msa0384880 | Msa0862650 | 0.814116 | 1.815190e-51 | -8.615850e-47 |
| Msa0389510 | Msa0862650 | 0.802820 | 4.678761e-49 | -8.615850e-47 |
| Msa0431770 | Msa0862650 | 0.821038 | 4.993444e-53 | -8.615850e-47 |
| Msa0434570 | Msa0862650 | 0.807483 | 4.944830e-50 | -8.615850e-47 |
| Msa0434770 | Msa0862650 | 0.816615 | 5.047270e-52 | -8.615850e-47 |
| Msa0436200 | Msa0862650 | 0.814196 | 1.742315e-51 | -8.615850e-47 |
| Msa0462880 | Msa0862650 | 0.815558 | 8.694291e-52 | -8.615850e-47 |
| Msa0474700 | Msa0862650 | 0.806052 | 9.918782e-50 | -8.615850e-47 |
| Msa0478580 | Msa0862650 | 0.821026 | 5.025796e-53 | -8.615850e-47 |
| Msa0241830 | Msa0862650 | 0.805249 | 1.462195e-49 | -8.615850e-47 |
| Msa0259160 | Msa0862650 | 0.803121 | 4.054593e-49 | -8.615850e-47 |
| Msa0273650 | Msa0862650 | 0.801420 | 9.079706e-49 | -8.615850e-47 |
| Msa0296250 | Msa0862650 | 0.850392 | 1.748887e-60 | -8.615850e-47 |
| Msa0332640 | Msa0862650 | 0.802017 | 6.847963e-49 | -8.615850e-47 |
| Msa0333160 | Msa0862650 | 0.802897 | 4.510186e-49 | -8.615850e-47 |
| Msa0510290 | Msa0862650 | 0.826301 | 2.923692e-54 | -8.615850e-47 |
| Msa0518960 | Msa0862650 | 0.800066 | 1.715973e-48 | -8.615850e-47 |
| Msa0527910 | Msa0862650 | 0.802898 | 4.509530e-49 | -8.615850e-47 |
| Msa0547990 | Msa0862650 | 0.817803 | 2.727674e-52 | -8.615850e-47 |
| Msa0549590 | Msa0862650 | 0.802711 | 4.928924e-49 | -8.615850e-47 |
| Msa0549790 | Msa0862650 | 0.816959 | 4.225947e-52 | -8.615850e-47 |
| Msa0550540 | Msa0862650 | 0.815594 | 8.535739e-52 | -8.615850e-47 |
| Msa0550570 | Msa0862650 | 0.834962 | 2.213219e-56 | -8.615850e-47 |
| Msa0578090 | Msa0862650 | 0.804873 | 1.752410e-49 | -8.615850e-47 |
| Msa0583500 | Msa0862650 | 0.816785 | 4.623111e-52 | -8.615850e-47 |
| Msa0593700 | Msa0862650 | 0.832750 | 7.911883e-56 | -8.615850e-47 |
| Msa0851470 | Msa0862650 | 0.812443 | 4.228970e-51 | -8.615850e-47 |
| Msa0862650 | Msa0864420 | 0.804396 | 2.203625e-49 | -8.615850e-47 |
| Msa0862650 | Msa0865570 | 0.832270 | 1.040114e-55 | -8.615850e-47 |
| Msa0862650 | Msa0865620 | 0.834008 | 3.840683e-56 | -8.615850e-47 |
| Msa0862650 | Msa0869010 | 0.820487 | 6.684851e-53 | -8.615850e-47 |
| Msa0862650 | Msa0888940 | 0.823140 | 1.625794e-53 | -8.615850e-47 |
| Msa0862650 | Msa0897400 | 0.803387 | 3.571875e-49 | -8.615850e-47 |
| Msa0862650 | Msa0928120 | 0.810108 | 1.357638e-50 | -8.615850e-47 |
| Msa0862650 | Msa0943170 | 0.811304 | 7.484672e-51 | -8.615850e-47 |
| Msa0862650 | Msa0960830 | 0.824247 | 8.952988e-54 | -8.615850e-47 |
| Msa0862650 | Msa0961350 | 0.816848 | 4.475256e-52 | -8.615850e-47 |
| Msa0862650 | Msa0963020 | 0.840691 | 7.464787e-58 | -8.615850e-47 |
| Msa0862650 | Msa0980940 | 0.801690 | 7.994899e-49 | -8.615850e-47 |
| Msa0862650 | Msa0981430 | 0.803227 | 3.854971e-49 | -8.615850e-47 |
| Msa0862650 | Msa0990590 | 0.800856 | 1.184210e-48 | -8.615850e-47 |
| Msa0862650 | Msa1017510 | 0.801944 | 7.090096e-49 | -8.615850e-47 |
| Msa0862650 | Msa1025940 | 0.817403 | 3.358595e-52 | -8.615850e-47 |
| Msa0862650 | Msa1029970 | 0.810032 | 1.409938e-50 | -8.615850e-47 |
| Msa0862650 | Msa1070390 | 0.839333 | 1.687067e-57 | -8.615850e-47 |
| Msa0862650 | Msa1076560 | 0.814174 | 1.762514e-51 | -8.615850e-47 |
| Msa0862650 | Msa1083880 | 0.826877 | 2.131711e-54 | -8.615850e-47 |
| Msa0862650 | Msa1098890 | 0.819346 | 1.218738e-52 | -8.615850e-47 |
| Msa0862650 | Msa1123350 | 0.807543 | 4.802371e-50 | -8.615850e-47 |
| Msa0862650 | Msa1126850 | 0.826491 | 2.635351e-54 | -8.615850e-47 |
| Msa0862650 | Msa1128990 | 0.824201 | 9.175594e-54 | -8.615850e-47 |
| Msa0862650 | Msa1154490 | 0.806997 | 6.266462e-50 | -8.615850e-47 |
| Msa0862650 | Msa1178050 | 0.808129 | 3.603693e-50 | -8.615850e-47 |
| Msa0862650 | Msa1188560 | 0.815421 | 9.324978e-52 | -8.615850e-47 |
| Msa0862650 | Msa1190970 | 0.815235 | 1.025872e-51 | -8.615850e-47 |
| Msa0862650 | Msa1192850 | 0.805670 | 1.193100e-49 | -8.615850e-47 |
| Msa0862650 | Msa1201810 | 0.822801 | 1.950437e-53 | -8.615850e-47 |
| Msa0862650 | Msa1201830 | 0.823603 | 1.267355e-53 | -8.615850e-47 |
| Msa0862650 | Msa1202580 | 0.818884 | 1.552275e-52 | -8.615850e-47 |
| Msa0862650 | Msa1211340 | 0.814438 | 1.540594e-51 | -8.615850e-47 |
| Msa0862650 | Msa1227690 | 0.803531 | 3.334306e-49 | -8.615850e-47 |
| Msa0862650 | Msa1244640 | 0.811515 | 6.737472e-51 | -8.615850e-47 |
| Msa0862650 | Msa1252850 | -0.800381 | 1.480161e-48 | -8.615850e-47 |
| Msa0862650 | Msa1253810 | 0.813721 | 2.217247e-51 | -8.615850e-47 |
| Msa0862650 | Msa1259640 | 0.810200 | 1.297079e-50 | -8.615850e-47 |
| Msa0862650 | Msa1279140 | -0.803068 | 4.158966e-49 | -8.615850e-47 |
| Msa0862650 | Msa1293590 | 0.814011 | 1.914202e-51 | -8.615850e-47 |
| Msa0862650 | Msa1294840 | 0.820621 | 6.226115e-53 | -8.615850e-47 |
| Msa0862650 | Msa1296300 | 0.829763 | 4.291372e-55 | -8.615850e-47 |
| Msa0862650 | Msa1329450 | 0.825914 | 3.615379e-54 | -8.615850e-47 |
| Msa0862650 | Msa1329790 | 0.815107 | 1.095190e-51 | -8.615850e-47 |
| Msa0862650 | Msa1331710 | 0.801364 | 9.324856e-49 | -8.615850e-47 |
| Msa0862650 | Msa1344310 | 0.806149 | 9.463399e-50 | -8.615850e-47 |
| Msa0862650 | Msa1373820 | 0.827133 | 1.850723e-54 | -8.615850e-47 |
| Msa0862650 | Msa1380970 | 0.828561 | 8.394686e-55 | -8.615850e-47 |
| Msa0862650 | Msa1389850 | 0.817747 | 2.809045e-52 | -8.615850e-47 |
| Msa0862650 | Msa1416260 | 0.808868 | 2.506878e-50 | -8.615850e-47 |
| Msa0862650 | Msa1424780 | 0.802745 | 4.850049e-49 | -8.615850e-47 |
| Msa0862650 | Msa1437210 | 0.811081 | 8.368941e-51 | -8.615850e-47 |
| Msa0862650 | Msa1450720 | 0.802880 | 4.547514e-49 | -8.615850e-47 |
| Msa0862650 | Msa1459910 | 0.833577 | 4.923330e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862650 | MtrunA17_Chr5g0444231 | 99.526 | 211 | 1 | 0 | 1 | 211 | 1 | 211 | 1.32e-154 | 430 |
| Msa0862650 | MtrunA17_Chr3g0099051 | 77.251 | 211 | 44 | 2 | 1 | 211 | 1 | 207 | 2.29e-116 | 333 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0862650 | AT1G28490.1 | 67.593 | 216 | 66 | 3 | 1 | 215 | 1 | 213 | 2.48e-101 | 296 |
| Msa0862650 | AT1G28490.3 | 67.702 | 161 | 49 | 2 | 55 | 215 | 11 | 168 | 8.66e-71 | 216 |
| Msa0862650 | AT1G28490.2 | 67.702 | 161 | 49 | 2 | 55 | 215 | 17 | 174 | 2.09e-70 | 216 |
Find 71 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTCTTTGACAACGTAAAA+TGG | 0.199042 | 5_4:+62366102 | None:intergenic |
| CAAAATTCTGAATATTTAAA+AGG | 0.232840 | 5_4:-62366354 | None:intergenic |
| TCTTGGTTGTAAATGCAAAA+AGG | 0.254892 | 5_4:-62361446 | Msa0862650:CDS |
| TACCTGGGTGCGAGCATTGC+TGG | 0.310121 | 5_4:+62364466 | None:intergenic |
| TGAAGAATACCAAGATAAAA+AGG | 0.311255 | 5_4:+62361487 | None:intergenic |
| AAAAGGGTTAATTAAGTAAA+TGG | 0.324269 | 5_4:+62366330 | None:intergenic |
| GGAAAAGATTCTAGATGAAC+TGG | 0.327556 | 5_4:-62361761 | Msa0862650:CDS |
| TGATAGAAAGGTGGATGAAT+TGG | 0.340172 | 5_4:-62364570 | Msa0862650:intron |
| CAGAATCTGGAATTGGGAAT+TGG | 0.351772 | 5_4:+62366152 | None:intergenic |
| GACGTACTTTGATGAGAATC+TGG | 0.370989 | 5_4:+62364150 | None:intergenic |
| CATTATCCCCAGAGGCATAT+TGG | 0.373000 | 5_4:+62364118 | None:intergenic |
| TAGCATCTAGAGATCCTTCT+TGG | 0.380240 | 5_4:-62364532 | Msa0862650:CDS |
| TGGGAAAACACTTCTGATAC+TGG | 0.386415 | 5_4:-62365476 | Msa0862650:CDS |
| AACGAACACTAAGCTTTGTT+TGG | 0.402381 | 5_4:+62366215 | None:intergenic |
| GATGATGATATGTGGTTTGC+TGG | 0.410145 | 5_4:-62361523 | Msa0862650:CDS |
| CATTGCTGGTCCACCTCCTC+CGG | 0.425273 | 5_4:+62364480 | None:intergenic |
| CAATACATGAAGAGCTCCTT+GGG | 0.426328 | 5_4:-62361975 | Msa0862650:CDS |
| AAGTCTAACCAATATGCCTC+TGG | 0.429106 | 5_4:-62364126 | Msa0862650:CDS |
| ATGAAGAAGGCCAGTGCAAA+GGG | 0.430950 | 5_4:-62361552 | Msa0862650:CDS |
| CATCATCTGCCCCTTTGCAC+TGG | 0.444110 | 5_4:+62361542 | None:intergenic |
| ACACGAAATTGATGAACAAA+TGG | 0.457215 | 5_4:+62366185 | None:intergenic |
| AGTTTAAGTGTACAGAGAAT+CGG | 0.466460 | 5_4:-62362012 | Msa0862650:CDS |
| GTGAAAAGAAAAGAAAGTAT+TGG | 0.466803 | 5_4:+62366261 | None:intergenic |
| CAGCAAGAACTTCCTTTGAA+AGG | 0.473857 | 5_4:+62365441 | None:intergenic |
| TTGTGGAAGTATTGAGTGGC+AGG | 0.474925 | 5_4:-62365417 | Msa0862650:intron |
| AAGGAAGTTCTTGCTGCTTG+TGG | 0.475725 | 5_4:-62365434 | Msa0862650:CDS |
| CTAGTATAAGTGGGATGCAC+AGG | 0.476219 | 5_4:-62364188 | Msa0862650:CDS |
| ACAATACATGAAGAGCTCCT+TGG | 0.478003 | 5_4:-62361976 | Msa0862650:CDS |
| CTAGTCGTTTCTGAATGTCT+TGG | 0.480262 | 5_4:-62361463 | Msa0862650:CDS |
| ACAACTCATGCTAGTATAAG+TGG | 0.493222 | 5_4:-62364198 | Msa0862650:CDS |
| ATTAAGAGAACAGTGGAAGC+TGG | 0.496755 | 5_4:-62364237 | Msa0862650:CDS |
| TACTGCTATTGATAGGCAGC+AGG | 0.501024 | 5_4:-62362055 | Msa0862650:intron |
| TCATAGAATCAGAATCAGAT+AGG | 0.505091 | 5_4:-62364089 | Msa0862650:CDS |
| ATGAAGTGGAGATTGAAAAC+CGG | 0.508658 | 5_4:-62364499 | Msa0862650:CDS |
| GAGAACAGTGGAAGCTGGAA+AGG | 0.519334 | 5_4:-62364232 | Msa0862650:CDS |
| ACATGAAGAGCTCCTTGGGC+AGG | 0.525155 | 5_4:-62361971 | Msa0862650:intron |
| AGTCTAACCAATATGCCTCT+GGG | 0.528315 | 5_4:-62364125 | Msa0862650:CDS |
| AGATTGAAAACCGGAGGAGG+TGG | 0.529877 | 5_4:-62364490 | Msa0862650:CDS |
| TTGGACAAAATCTAGACGAT+TGG | 0.532143 | 5_4:+62361717 | None:intergenic |
| GTACAGAGAATCGGAGGTGT+TGG | 0.534643 | 5_4:-62362003 | Msa0862650:CDS |
| TCTAGAGATCCTTCTTGGTA+TGG | 0.537717 | 5_4:-62364527 | Msa0862650:CDS |
| AGATGAACTGGGAAATGAGA+TGG | 0.539156 | 5_4:-62361749 | Msa0862650:CDS |
| TATTGATAGGCAGCAGGACG+AGG | 0.542113 | 5_4:-62362049 | Msa0862650:intron |
| TCTGGAATTGGGAATTGGAA+TGG | 0.545373 | 5_4:+62366157 | None:intergenic |
| AGTGGCAATGGTGATGAAGA+AGG | 0.556318 | 5_4:-62361565 | Msa0862650:CDS |
| ATTTCAGAAAAGAGTGGCAA+TGG | 0.560428 | 5_4:-62361577 | Msa0862650:intron |
| AGAACAGTGGAAGCTGGAAA+GGG | 0.568137 | 5_4:-62364231 | Msa0862650:CDS |
| GATGAAGAAGGCCAGTGCAA+AGG | 0.571528 | 5_4:-62361553 | Msa0862650:CDS |
| TGGAGATTGAAAACCGGAGG+AGG | 0.573238 | 5_4:-62364493 | Msa0862650:CDS |
| TTGGTATGGCATTGATGAAG+TGG | 0.577534 | 5_4:-62364513 | Msa0862650:CDS |
| TAAAATGGATCTTGAGCTGA+GGG | 0.587285 | 5_4:+62366117 | None:intergenic |
| CGAAATTGATGAACAAATGG+AGG | 0.592194 | 5_4:+62366188 | None:intergenic |
| CAAGACATTCAGAAACGACT+AGG | 0.594084 | 5_4:+62361464 | None:intergenic |
| ATTGATGAACAAATGGAGGA+AGG | 0.594980 | 5_4:+62366192 | None:intergenic |
| TGAGCATTTGAACCTTTCAA+AGG | 0.596975 | 5_4:-62365453 | Msa0862650:CDS |
| CTGCTTGTGGAAGTATTGAG+TGG | 0.603126 | 5_4:-62365421 | Msa0862650:CDS |
| TCATCAATGCCATACCAAGA+AGG | 0.605775 | 5_4:+62364518 | None:intergenic |
| GGATGCACAGGGAATTAATG+AGG | 0.609838 | 5_4:-62364176 | Msa0862650:CDS |
| GACCAGCAATGCTCGCACCC+AGG | 0.617619 | 5_4:-62364468 | Msa0862650:intron |
| CAACTCATGCTAGTATAAGT+GGG | 0.625213 | 5_4:-62364197 | Msa0862650:CDS |
| ATATATCAGCTACCTGCCCA+AGG | 0.637394 | 5_4:+62361959 | None:intergenic |
| TAGTATAAGTGGGATGCACA+GGG | 0.644916 | 5_4:-62364187 | Msa0862650:CDS |
| GTAAAATGGATCTTGAGCTG+AGG | 0.647163 | 5_4:+62366116 | None:intergenic |
| GTCTAACCAATATGCCTCTG+GGG | 0.647453 | 5_4:-62364124 | Msa0862650:CDS |
| AAGTGGAGATTGAAAACCGG+AGG | 0.652309 | 5_4:-62364496 | Msa0862650:CDS |
| GAAAAGATTCTAGATGAACT+GGG | 0.658756 | 5_4:-62361760 | Msa0862650:CDS |
| GGGCAGATGATGATGATATG+TGG | 0.673837 | 5_4:-62361531 | Msa0862650:CDS |
| TTAAGTGTACAGAGAATCGG+AGG | 0.688868 | 5_4:-62362009 | Msa0862650:CDS |
| GCGCACAATTAAGAGAACAG+TGG | 0.704934 | 5_4:-62364244 | Msa0862650:CDS |
| TGAAGAAGGCCAGTGCAAAG+GGG | 0.733851 | 5_4:-62361551 | Msa0862650:CDS |
| GAAATCATCATTATCCCCAG+AGG | 0.750638 | 5_4:+62364110 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCATTATCAATTATTATTT+GGG | - | chr5_4:62362194-62362213 | Msa0862650:intron | 10.0% |
| !! | ATATTTGTAAATATCATTAT+TGG | - | chr5_4:62362672-62362691 | Msa0862650:intron | 10.0% |
| !!! | TATAATATTTTCATAGTTTA+GGG | + | chr5_4:62362871-62362890 | None:intergenic | 10.0% |
| !!! | TTATAATATTTTCATAGTTT+AGG | + | chr5_4:62362872-62362891 | None:intergenic | 10.0% |
| !!! | TGTCAATTTTTTTTTATATT+AGG | - | chr5_4:62365443-62365462 | Msa0862650:CDS | 10.0% |
| !!! | CAAATAATAATTGATAATGA+AGG | + | chr5_4:62362195-62362214 | None:intergenic | 15.0% |
| !! | CTTCATTATCAATTATTATT+TGG | - | chr5_4:62362193-62362212 | Msa0862650:intron | 15.0% |
| !!! | ATTTTATGGTTTTTTTTATG+TGG | - | chr5_4:62362231-62362250 | Msa0862650:intron | 15.0% |
| !! | AGTAACTTTAACATAAATAT+AGG | - | chr5_4:62364145-62364164 | Msa0862650:CDS | 15.0% |
| !!! | TTGGTTTTAAAAGTTAAATT+TGG | - | chr5_4:62364202-62364221 | Msa0862650:CDS | 15.0% |
| !! | AAAAGGGTTAATTAAGTAAA+TGG | + | chr5_4:62361437-62361456 | None:intergenic | 20.0% |
| !!! | AAATTTGCATTTTTTCTTCA+TGG | - | chr5_4:62361741-62361760 | Msa0862650:CDS | 20.0% |
| !! | CATCAATAAAAATAGGAATT+GGG | + | chr5_4:62361858-62361877 | None:intergenic | 20.0% |
| !! | TACATTGCATCAATAAAAAT+AGG | + | chr5_4:62361865-62361884 | None:intergenic | 20.0% |
| !! | CATCAATAAAAATAAGAACT+GGG | + | chr5_4:62362116-62362135 | None:intergenic | 20.0% |
| !!! | TGTGATTGATATTGATTTTA+TGG | - | chr5_4:62362217-62362236 | Msa0862650:intron | 20.0% |
| !! | TTCTTTAGCAAGAAAATTTA+AGG | - | chr5_4:62362612-62362631 | Msa0862650:intron | 20.0% |
| !! | ATGGTTTATTCAAAATAAGA+AGG | - | chr5_4:62362974-62362993 | Msa0862650:intron | 20.0% |
| !! | TGGTTTATTCAAAATAAGAA+GGG | - | chr5_4:62362975-62362994 | Msa0862650:intron | 20.0% |
| !!! | GTGTTAATTTTTTGATAGAA+AGG | - | chr5_4:62363182-62363201 | Msa0862650:intron | 20.0% |
| !!! | TTAATTTTTTGATAGAAAGG+TGG | - | chr5_4:62363185-62363204 | Msa0862650:intron | 20.0% |
| !!! | TTTATTTTCTTGGTTACAAA+AGG | + | chr5_4:62363435-62363454 | None:intergenic | 20.0% |
| !!! | AATGGAAAACTTTATTTTCT+TGG | + | chr5_4:62363445-62363464 | None:intergenic | 20.0% |
| !! | AACAAATGTTGTTCATTAAT+AGG | - | chr5_4:62363496-62363515 | Msa0862650:intron | 20.0% |
| !! | TACTATATAAGATGAAGAAA+GGG | + | chr5_4:62363730-62363749 | None:intergenic | 20.0% |
| !! | ATACTATATAAGATGAAGAA+AGG | + | chr5_4:62363731-62363750 | None:intergenic | 20.0% |
| !! | ATGTACACAAATTCAATTTA+AGG | + | chr5_4:62363771-62363790 | None:intergenic | 20.0% |
| !! | AAACAATATAACTGAAATAG+TGG | - | chr5_4:62364060-62364079 | Msa0862650:intron | 20.0% |
| !! | AATACAATGTTCAAGTATTT+AGG | - | chr5_4:62364173-62364192 | Msa0862650:CDS | 20.0% |
| !! | ATTTGGAAACAAAATATGTT+TGG | - | chr5_4:62364219-62364238 | Msa0862650:CDS | 20.0% |
| !! | TTTGGAAACAAAATATGTTT+GGG | - | chr5_4:62364220-62364239 | Msa0862650:CDS | 20.0% |
| !! | AAATATGTTTGGGTAAAATA+CGG | - | chr5_4:62364230-62364249 | Msa0862650:CDS | 20.0% |
| !!! | CTTAAAACTTTTTCAAGATT+GGG | + | chr5_4:62364272-62364291 | None:intergenic | 20.0% |
| !!! | CAATCTTGAAAAAGTTTTAA+GGG | - | chr5_4:62364271-62364290 | Msa0862650:intron | 20.0% |
| !!! | AAATGTATTTATGTGGTTTT+TGG | + | chr5_4:62364300-62364319 | None:intergenic | 20.0% |
| !! | AATCAGAAAATGTATTTATG+TGG | + | chr5_4:62364307-62364326 | None:intergenic | 20.0% |
| !!! | TTTAGAATTTCAAAAGTTTG+AGG | + | chr5_4:62364964-62364983 | None:intergenic | 20.0% |
| !! | TATATAATGAAAAAGCAACT+GGG | + | chr5_4:62365231-62365250 | None:intergenic | 20.0% |
| !!! | TTTGATTGATGATAGAAAAT+TGG | - | chr5_4:62365276-62365295 | Msa0862650:intron | 20.0% |
| !!! | TTGATTGATGATAGAAAATT+GGG | - | chr5_4:62365277-62365296 | Msa0862650:intron | 20.0% |
| !!! | TAATTGTTTTACTTTGTTTG+TGG | - | chr5_4:62365302-62365321 | Msa0862650:intron | 20.0% |
| !!! | AATTGTTTTACTTTGTTTGT+GGG | - | chr5_4:62365303-62365322 | Msa0862650:intron | 20.0% |
| !!! | ATTAACTTCACTTCTTTTTT+TGG | + | chr5_4:62365504-62365523 | None:intergenic | 20.0% |
| !!! | TATTGGAGTTTTTTCTTGTT+TGG | + | chr5_4:62361489-62361508 | None:intergenic | 25.0% |
| !! | GTGAAAAGAAAAGAAAGTAT+TGG | + | chr5_4:62361506-62361525 | None:intergenic | 25.0% |
| ! | AATTCAATACACAATCAGAT+TGG | + | chr5_4:62361798-62361817 | None:intergenic | 25.0% |
| ! | GCATCAATAAAAATAGGAAT+TGG | + | chr5_4:62361859-62361878 | None:intergenic | 25.0% |
| ! | CATCAATAAAAATAAGAGCT+GGG | + | chr5_4:62361962-62361981 | None:intergenic | 25.0% |
| ! | TCATCAATAAAAATAAGAGC+TGG | + | chr5_4:62361963-62361982 | None:intergenic | 25.0% |
| ! | CATCAACAAAAATAGGAATT+GGG | + | chr5_4:62362014-62362033 | None:intergenic | 25.0% |
| !!! | ATGCAAAGTTTTGATATTTG+AGG | - | chr5_4:62362086-62362105 | Msa0862650:intron | 25.0% |
| ! | GCATCAATAAAAATAAGAAC+TGG | + | chr5_4:62362117-62362136 | None:intergenic | 25.0% |
| !! | TGCAATCTAATTTTCATCAA+TGG | - | chr5_4:62362268-62362287 | Msa0862650:intron | 25.0% |
| !! | GCAATCTAATTTTCATCAAT+GGG | - | chr5_4:62362269-62362288 | Msa0862650:intron | 25.0% |
| ! | AAAATACATTGACCAAATTG+TGG | + | chr5_4:62362404-62362423 | None:intergenic | 25.0% |
| ! | TTTATTTATTCCTCCAACAT+TGG | - | chr5_4:62362438-62362457 | Msa0862650:intron | 25.0% |
| !! | ACTAATTTGTATACCAATGT+TGG | + | chr5_4:62362454-62362473 | None:intergenic | 25.0% |
| ! | GTAAAATAACTTCTGAACAT+GGG | + | chr5_4:62362579-62362598 | None:intergenic | 25.0% |
| ! | AGTAAAATAACTTCTGAACA+TGG | + | chr5_4:62362580-62362599 | None:intergenic | 25.0% |
| ! | GATACAATCAAAGAAAAACA+AGG | + | chr5_4:62362795-62362814 | None:intergenic | 25.0% |
| ! | ACGAAGTTTCAAATACTAAA+GGG | + | chr5_4:62362900-62362919 | None:intergenic | 25.0% |
| !! | TTTAGTATTTGAAACTTCGT+CGG | - | chr5_4:62362900-62362919 | Msa0862650:intron | 25.0% |
| ! | AATTAATGGTTTCTGATTGA+TGG | - | chr5_4:62362955-62362974 | Msa0862650:intron | 25.0% |
| ! | TTTATTCAAAATAAGAAGGG+TGG | - | chr5_4:62362978-62362997 | Msa0862650:intron | 25.0% |
| !! | ACACAAATTCAATTTAAGGT+GGG | + | chr5_4:62363767-62363786 | None:intergenic | 25.0% |
| ! | TACACAAATTCAATTTAAGG+TGG | + | chr5_4:62363768-62363787 | None:intergenic | 25.0% |
| !!! | TACAAAAAAGTGTCCATAAT+TGG | + | chr5_4:62363811-62363830 | None:intergenic | 25.0% |
| ! | ACAATTTATTGCAAGTACAA+AGG | + | chr5_4:62363921-62363940 | None:intergenic | 25.0% |
| ! | CAACATTAAAACAATTAGCA+CGG | + | chr5_4:62364015-62364034 | None:intergenic | 25.0% |
| ! | CCTATAGAAGATAAGAAAAT+CGG | - | chr5_4:62364098-62364117 | Msa0862650:CDS | 25.0% |
| ! | CTATAGAAGATAAGAAAATC+GGG | - | chr5_4:62364099-62364118 | Msa0862650:CDS | 25.0% |
| !!! | CCTTAAAACTTTTTCAAGAT+TGG | + | chr5_4:62364273-62364292 | None:intergenic | 25.0% |
| !! | CCAATCTTGAAAAAGTTTTA+AGG | - | chr5_4:62364270-62364289 | Msa0862650:intron | 25.0% |
| !! | TTTTGTTGAGATATAGCTTT+TGG | - | chr5_4:62364730-62364749 | Msa0862650:intron | 25.0% |
| !! | TTTGTTGAGATATAGCTTTT+GGG | - | chr5_4:62364731-62364750 | Msa0862650:intron | 25.0% |
| ! | TGGAAAAGTTTGTAAAAAAG+AGG | + | chr5_4:62365101-62365120 | None:intergenic | 25.0% |
| ! | CTATATAATGAAAAAGCAAC+TGG | + | chr5_4:62365232-62365251 | None:intergenic | 25.0% |
| !!! | ATTGTTTTACTTTGTTTGTG+GGG | - | chr5_4:62365304-62365323 | Msa0862650:intron | 25.0% |
| ! | AAAGCAAAAAGATAGAACAA+AGG | + | chr5_4:62365357-62365376 | None:intergenic | 25.0% |
| ! | ATTATAAAACTGACAACTTG+TGG | + | chr5_4:62365681-62365700 | None:intergenic | 25.0% |
| ! | TGATATTTACTGCTATTGAT+AGG | - | chr5_4:62365702-62365721 | Msa0862650:intron | 25.0% |
| ! | TTTATGATTTCAGAAAAGAG+TGG | - | chr5_4:62366181-62366200 | Msa0862650:five_prime_UTR | 25.0% |
| ! | GATAAAAAGGAAAATGAACA+GGG | + | chr5_4:62366267-62366286 | None:intergenic | 25.0% |
| ! | AGATAAAAAGGAAAATGAAC+AGG | + | chr5_4:62366268-62366287 | None:intergenic | 25.0% |
| !! | GTTCATTTTCCTTTTTATCT+TGG | - | chr5_4:62366268-62366287 | Msa0862650:five_prime_UTR | 25.0% |
| ! | TGAAGAATACCAAGATAAAA+AGG | + | chr5_4:62366280-62366299 | None:intergenic | 25.0% |
| ACACGAAATTGATGAACAAA+TGG | + | chr5_4:62361582-62361601 | None:intergenic | 30.0% | |
| !! | TTTTCTCAGAATCTGGAATT+GGG | + | chr5_4:62361621-62361640 | None:intergenic | 30.0% |
| !! | TTTTTCTCAGAATCTGGAAT+TGG | + | chr5_4:62361622-62361641 | None:intergenic | 30.0% |
| !!! | GCATTTTTTTTCTCAGAATC+TGG | + | chr5_4:62361628-62361647 | None:intergenic | 30.0% |
| TCTTCTTTGACAACGTAAAA+TGG | + | chr5_4:62361665-62361684 | None:intergenic | 30.0% | |
| TTCTAACAATTGCGAAATGA+AGG | + | chr5_4:62361719-62361738 | None:intergenic | 30.0% | |
| ATCAACAAAAAAAGGGAACT+GGG | + | chr5_4:62361910-62361929 | None:intergenic | 30.0% | |
| GCATTGCATCAACAAAAAAA+GGG | + | chr5_4:62361917-62361936 | None:intergenic | 30.0% | |
| TGCATTGCATCAACAAAAAA+AGG | + | chr5_4:62361918-62361937 | None:intergenic | 30.0% | |
| GCATCAACAAAAATAGGAAT+TGG | + | chr5_4:62362015-62362034 | None:intergenic | 30.0% | |
| TGCAATGCATCAACAAAAAT+AGG | + | chr5_4:62362021-62362040 | None:intergenic | 30.0% | |
| TGCATTGCATCAACAAAAAT+GGG | + | chr5_4:62362071-62362090 | None:intergenic | 30.0% | |
| TTGCATTGCATCAACAAAAA+TGG | + | chr5_4:62361919-62361938 | None:intergenic | 30.0% | |
| ! | TTTTATGTGGCAAGATTGAT+AGG | - | chr5_4:62362244-62362263 | Msa0862650:intron | 30.0% |
| AATTTGTATACCAATGTTGG+AGG | + | chr5_4:62362451-62362470 | None:intergenic | 30.0% | |
| AGTTATTAAACACGCACTTA+AGG | - | chr5_4:62362504-62362523 | Msa0862650:intron | 30.0% | |
| AATCAAAGAAAAACAAGGCT+GGG | + | chr5_4:62362790-62362809 | None:intergenic | 30.0% | |
| GACGAAGTTTCAAATACTAA+AGG | + | chr5_4:62362901-62362920 | None:intergenic | 30.0% | |
| TCCCTAACATCTTAATATCA+GGG | - | chr5_4:62362928-62362947 | Msa0862650:intron | 30.0% | |
| TCCCTGATATTAAGATGTTA+GGG | + | chr5_4:62362932-62362951 | None:intergenic | 30.0% | |
| AATATCAGGGACTGAATTAA+TGG | - | chr5_4:62362941-62362960 | Msa0862650:intron | 30.0% | |
| AATAAGAAGGGTGGTAAAAA+TGG | - | chr5_4:62362987-62363006 | Msa0862650:intron | 30.0% | |
| !! | TGACATAGGTTATTTTACCT+GGG | + | chr5_4:62363316-62363335 | None:intergenic | 30.0% |
| !! | TTGACATAGGTTATTTTACC+TGG | + | chr5_4:62363317-62363336 | None:intergenic | 30.0% |
| ACCTATGTCAAACTTTAACA+AGG | - | chr5_4:62363326-62363345 | Msa0862650:intron | 30.0% | |
| TAAATGAACAGCTGTAGATT+AGG | + | chr5_4:62363381-62363400 | None:intergenic | 30.0% | |
| GAAAGGAAATCTAATATCTG+TGG | + | chr5_4:62363413-62363432 | None:intergenic | 30.0% | |
| TTTCTTGGTTACAAAAGGAA+AGG | + | chr5_4:62363430-62363449 | None:intergenic | 30.0% | |
| TCATAGAATCAGAATCAGAT+AGG | - | chr5_4:62363675-62363694 | Msa0862650:intron | 30.0% | |
| GTGATATCAAACTCCAATTA+TGG | - | chr5_4:62363795-62363814 | Msa0862650:intron | 30.0% | |
| TGAGATGGAAAATATTCTCT+TGG | - | chr5_4:62363831-62363850 | Msa0862650:intron | 30.0% | |
| ! | CCGATTTTCTTATCTTCTAT+AGG | + | chr5_4:62364101-62364120 | None:intergenic | 30.0% |
| GGAAAGAATAGTATAAACTC+TGG | - | chr5_4:62364120-62364139 | Msa0862650:CDS | 30.0% | |
| ACAATGTTCAAGTATTTAGG+TGG | - | chr5_4:62364176-62364195 | Msa0862650:CDS | 30.0% | |
| ! | TCAAGTATTTAGGTGGTTTT+TGG | - | chr5_4:62364183-62364202 | Msa0862650:CDS | 30.0% |
| AGAAAAAATCAACGCAAACA+GGG | + | chr5_4:62364683-62364702 | None:intergenic | 30.0% | |
| AAGAAAAAATCAACGCAAAC+AGG | + | chr5_4:62364684-62364703 | None:intergenic | 30.0% | |
| !!! | TGCGTTGATTTTTTCTTACT+TGG | - | chr5_4:62364687-62364706 | Msa0862650:intron | 30.0% |
| ! | TTGTTGAGATATAGCTTTTG+GGG | - | chr5_4:62364732-62364751 | Msa0862650:intron | 30.0% |
| ACACAACAAAAATATGCAGA+AGG | + | chr5_4:62364775-62364794 | None:intergenic | 30.0% | |
| !! | TGCATATTTTTGTTGTGTGT+GGG | - | chr5_4:62364777-62364796 | Msa0862650:intron | 30.0% |
| ! | AACTGTTTTGCATTACAACA+AGG | + | chr5_4:62364804-62364823 | None:intergenic | 30.0% |
| ! | CATAATGGAAGCCTTAATTA+GGG | + | chr5_4:62364876-62364895 | None:intergenic | 30.0% |
| ! | TCATAATGGAAGCCTTAATT+AGG | + | chr5_4:62364877-62364896 | None:intergenic | 30.0% |
| CAAAATCATGCAGAGATAAT+TGG | + | chr5_4:62365121-62365140 | None:intergenic | 30.0% | |
| AAGAAGTGAAGTTAATAGAG+TGG | - | chr5_4:62365508-62365527 | Msa0862650:CDS | 30.0% | |
| AGTTTAAGTGTACAGAGAAT+CGG | - | chr5_4:62365752-62365771 | Msa0862650:intron | 30.0% | |
| AATCTCTCAGCAATAAAATC+AGG | + | chr5_4:62365947-62365966 | None:intergenic | 30.0% | |
| GAAAAGATTCTAGATGAACT+GGG | - | chr5_4:62366004-62366023 | Msa0862650:intron | 30.0% | |
| !! | CTCTCTGATTTTAATATTGC+TGG | - | chr5_4:62366094-62366113 | Msa0862650:CDS | 30.0% |
| GCTGGTAATAAAGATATGAA+TGG | - | chr5_4:62366112-62366131 | Msa0862650:CDS | 30.0% | |
| TCTTGGTTGTAAATGCAAAA+AGG | - | chr5_4:62366318-62366337 | Msa0862650:five_prime_UTR | 30.0% | |
| CTTGGTTGTAAATGCAAAAA+GGG | - | chr5_4:62366319-62366338 | Msa0862650:five_prime_UTR | 30.0% | |
| ! | ATCTTTTGTCTTCTCAAACT+TGG | + | chr5_4:62366347-62366366 | None:intergenic | 30.0% |
| !! | AACGAACACTAAGCTTTGTT+TGG | + | chr5_4:62361552-62361571 | None:intergenic | 35.0% |
| ATTGATGAACAAATGGAGGA+AGG | + | chr5_4:62361575-62361594 | None:intergenic | 35.0% | |
| CGAAATTGATGAACAAATGG+AGG | + | chr5_4:62361579-62361598 | None:intergenic | 35.0% | |
| TAAAATGGATCTTGAGCTGA+GGG | + | chr5_4:62361650-62361669 | None:intergenic | 35.0% | |
| TGGATCATGCAATAAAGTGA+TGG | + | chr5_4:62361778-62361797 | None:intergenic | 35.0% | |
| CATCAACAAAAAAAGGGAAC+TGG | + | chr5_4:62361911-62361930 | None:intergenic | 35.0% | |
| CATCAACAAAAATGGGAACT+GGG | + | chr5_4:62362064-62362083 | None:intergenic | 35.0% | |
| CATAGTTACAGATCAGAACT+GGG | + | chr5_4:62362170-62362189 | None:intergenic | 35.0% | |
| TCATAGTTACAGATCAGAAC+TGG | + | chr5_4:62362171-62362190 | None:intergenic | 35.0% | |
| TGAGCATTTGAACCTTTCAA+AGG | - | chr5_4:62362311-62362330 | Msa0862650:intron | 35.0% | |
| TACATTGACCAAATTGTGGA+AGG | + | chr5_4:62362400-62362419 | None:intergenic | 35.0% | |
| ACTTAAGGTATGTCTGAGTT+TGG | - | chr5_4:62362519-62362538 | Msa0862650:intron | 35.0% | |
| ATCAAAGAAAAACAAGGCTG+GGG | + | chr5_4:62362789-62362808 | None:intergenic | 35.0% | |
| CAATCAAAGAAAAACAAGGC+TGG | + | chr5_4:62362791-62362810 | None:intergenic | 35.0% | |
| GTCCCTAACATCTTAATATC+AGG | - | chr5_4:62362927-62362946 | Msa0862650:intron | 35.0% | |
| GTCCCTGATATTAAGATGTT+AGG | + | chr5_4:62362933-62362952 | None:intergenic | 35.0% | |
| ATGGAGTCTAGTGAAAATGT+TGG | - | chr5_4:62363006-62363025 | Msa0862650:intron | 35.0% | |
| TGAACATGTGTGATAAAGAG+AGG | + | chr5_4:62363098-62363117 | None:intergenic | 35.0% | |
| AGCATTGCTAATATTTGACG+TGG | - | chr5_4:62363117-62363136 | Msa0862650:intron | 35.0% | |
| AGTTTGAACAGATTGTATCG+CGG | + | chr5_4:62363154-62363173 | None:intergenic | 35.0% | |
| TGATAGAAAGGTGGATGAAT+TGG | - | chr5_4:62363194-62363213 | Msa0862650:intron | 35.0% | |
| ATGAAGTGGAGATTGAAAAC+CGG | - | chr5_4:62363265-62363284 | Msa0862650:intron | 35.0% | |
| ! | GCCTTGTTAAAGTTTGACAT+AGG | + | chr5_4:62363330-62363349 | None:intergenic | 35.0% |
| GTCAAACTTTAACAAGGCTA+AGG | - | chr5_4:62363332-62363351 | Msa0862650:intron | 35.0% | |
| ACAACTCATGCTAGTATAAG+TGG | - | chr5_4:62363566-62363585 | Msa0862650:intron | 35.0% | |
| CAACTCATGCTAGTATAAGT+GGG | - | chr5_4:62363567-62363586 | Msa0862650:intron | 35.0% | |
| !!! | GGACACTTTTTTGTATGAGA+TGG | - | chr5_4:62363816-62363835 | Msa0862650:intron | 35.0% |
| TATAATGCACTCTGCTTAAG+AGG | + | chr5_4:62363872-62363891 | None:intergenic | 35.0% | |
| AGTACAAAGGATCTTACATC+TGG | + | chr5_4:62363908-62363927 | None:intergenic | 35.0% | |
| ! | AACAATTAGCACGGATTACA+AGG | + | chr5_4:62364006-62364025 | None:intergenic | 35.0% |
| AGACTGAGAAACTGTATTGA+AGG | + | chr5_4:62364628-62364647 | None:intergenic | 35.0% | |
| TATCTCAACAAAAGAAGCCA+CGG | + | chr5_4:62364723-62364742 | None:intergenic | 35.0% | |
| ! | TGTTGAGATATAGCTTTTGG+GGG | - | chr5_4:62364733-62364752 | Msa0862650:intron | 35.0% |
| !! | CTGCATATTTTTGTTGTGTG+TGG | - | chr5_4:62364776-62364795 | Msa0862650:intron | 35.0% |
| TAATGCAAAACAGTTGCTGT+TGG | - | chr5_4:62364809-62364828 | Msa0862650:intron | 35.0% | |
| ! | AATGCAAAACAGTTGCTGTT+GGG | - | chr5_4:62364810-62364829 | Msa0862650:intron | 35.0% |
| TTAAGGCTTCCATTATGAGT+TGG | - | chr5_4:62364879-62364898 | Msa0862650:intron | 35.0% | |
| ! | TTCAAAAGTTTGAGGTGCAT+GGG | + | chr5_4:62364956-62364975 | None:intergenic | 35.0% |
| ! | TTTCAAAAGTTTGAGGTGCA+TGG | + | chr5_4:62364957-62364976 | None:intergenic | 35.0% |
| CTCTTTACTACACTGTTGAA+TGG | - | chr5_4:62365168-62365187 | Msa0862650:intron | 35.0% | |
| TACTGTTGAAAATCAACTGC+AGG | + | chr5_4:62365204-62365223 | None:intergenic | 35.0% | |
| !! | TTTTACTTTGTTTGTGGGGT+TGG | - | chr5_4:62365308-62365327 | Msa0862650:intron | 35.0% |
| ! | TTTACTTTGTTTGTGGGGTT+GGG | - | chr5_4:62365309-62365328 | Msa0862650:intron | 35.0% |
| AAAGAACATCCATTCCTAGA+AGG | + | chr5_4:62365651-62365670 | None:intergenic | 35.0% | |
| !! | GCTTTGAAAAGTAGTAGACT+AGG | - | chr5_4:62365855-62365874 | Msa0862650:intron | 35.0% |
| CTTCTGTTGAAAACACTTGA+AGG | + | chr5_4:62365902-62365921 | None:intergenic | 35.0% | |
| TGTCAAAATCTTGATGCTTC+AGG | - | chr5_4:62365982-62366001 | Msa0862650:intron | 35.0% | |
| GGAAAAGATTCTAGATGAAC+TGG | - | chr5_4:62366003-62366022 | Msa0862650:intron | 35.0% | |
| TTGGACAAAATCTAGACGAT+TGG | + | chr5_4:62366050-62366069 | None:intergenic | 35.0% | |
| ATTTCAGAAAAGAGTGGCAA+TGG | - | chr5_4:62366187-62366206 | Msa0862650:five_prime_UTR | 35.0% | |
| ! | TCTGGAATTGGGAATTGGAA+TGG | + | chr5_4:62361610-62361629 | None:intergenic | 40.0% |
| ! | CAGAATCTGGAATTGGGAAT+TGG | + | chr5_4:62361615-62361634 | None:intergenic | 40.0% |
| GTAAAATGGATCTTGAGCTG+AGG | + | chr5_4:62361651-62361670 | None:intergenic | 40.0% | |
| GCATCAACAAAAATGGGAAC+TGG | + | chr5_4:62362065-62362084 | None:intergenic | 40.0% | |
| TGGGAAAACACTTCTGATAC+TGG | - | chr5_4:62362288-62362307 | Msa0862650:intron | 40.0% | |
| CAGCAAGAACTTCCTTTGAA+AGG | + | chr5_4:62362326-62362345 | None:intergenic | 40.0% | |
| TAGTGAAGCCTTCCACAATT+TGG | - | chr5_4:62362389-62362408 | Msa0862650:intron | 40.0% | |
| TTATCATCGCTTGCATGAAC+TGG | - | chr5_4:62362473-62362492 | Msa0862650:intron | 40.0% | |
| TATCATCGCTTGCATGAACT+GGG | - | chr5_4:62362474-62362493 | Msa0862650:intron | 40.0% | |
| GGAGTTTAATCTAGATCAGC+CGG | - | chr5_4:62362540-62362559 | Msa0862650:intron | 40.0% | |
| ! | TTTTCACCTTTCCTACCACA+GGG | + | chr5_4:62362822-62362841 | None:intergenic | 40.0% |
| ! | TTTTTCACCTTTCCTACCAC+AGG | + | chr5_4:62362823-62362842 | None:intergenic | 40.0% |
| TAGCATCTAGAGATCCTTCT+TGG | - | chr5_4:62363232-62363251 | Msa0862650:intron | 40.0% | |
| TCTAGAGATCCTTCTTGGTA+TGG | - | chr5_4:62363237-62363256 | Msa0862650:intron | 40.0% | |
| TCATCAATGCCATACCAAGA+AGG | + | chr5_4:62363249-62363268 | None:intergenic | 40.0% | |
| !! | TTGGTATGGCATTGATGAAG+TGG | - | chr5_4:62363251-62363270 | Msa0862650:intron | 40.0% |
| CAGCAGATAGAGAAAAGGAA+TGG | + | chr5_4:62363463-62363482 | None:intergenic | 40.0% | |
| TCATGCAGCAGATAGAGAAA+AGG | + | chr5_4:62363468-62363487 | None:intergenic | 40.0% | |
| ATTAAGAGAACAGTGGAAGC+TGG | - | chr5_4:62363527-62363546 | Msa0862650:intron | 40.0% | |
| TAGTATAAGTGGGATGCACA+GGG | - | chr5_4:62363577-62363596 | Msa0862650:intron | 40.0% | |
| GACGTACTTTGATGAGAATC+TGG | + | chr5_4:62363617-62363636 | None:intergenic | 40.0% | |
| AAGTCTAACCAATATGCCTC+TGG | - | chr5_4:62363638-62363657 | Msa0862650:intron | 40.0% | |
| AGTCTAACCAATATGCCTCT+GGG | - | chr5_4:62363639-62363658 | Msa0862650:intron | 40.0% | |
| GAAATCATCATTATCCCCAG+AGG | + | chr5_4:62363657-62363676 | None:intergenic | 40.0% | |
| TCAAAAGAGAATACACACGG+TGG | + | chr5_4:62364369-62364388 | None:intergenic | 40.0% | |
| GCGTCAAAAGAGAATACACA+CGG | + | chr5_4:62364372-62364391 | None:intergenic | 40.0% | |
| GTCCACAATTGTTCCAGTTA+CGG | - | chr5_4:62364437-62364456 | Msa0862650:intron | 40.0% | |
| AAAACAATGTCGCACAGGAA+CGG | + | chr5_4:62364473-62364492 | None:intergenic | 40.0% | |
| ATCTCAACAAAAGAAGCCAC+GGG | + | chr5_4:62364722-62364741 | None:intergenic | 40.0% | |
| ! | AAAACAGTTGCTGTTGGGTT+GGG | - | chr5_4:62364815-62364834 | Msa0862650:intron | 40.0% |
| TGCATCTCATGTTTAAGCCA+GGG | - | chr5_4:62364841-62364860 | Msa0862650:intron | 40.0% | |
| ! | TTCCATTATGAGTTGGCAGT+AGG | - | chr5_4:62364886-62364905 | Msa0862650:intron | 40.0% |
| ! | TCCATTATGAGTTGGCAGTA+GGG | - | chr5_4:62364887-62364906 | Msa0862650:intron | 40.0% |
| ATTATGCTCAACAGTGTGAC+TGG | - | chr5_4:62365020-62365039 | Msa0862650:intron | 40.0% | |
| AAAACAGAAAACCACCTACG+AGG | - | chr5_4:62365615-62365634 | Msa0862650:intron | 40.0% | |
| TTAAGTGTACAGAGAATCGG+AGG | - | chr5_4:62365755-62365774 | Msa0862650:intron | 40.0% | |
| ACAATACATGAAGAGCTCCT+TGG | - | chr5_4:62365788-62365807 | Msa0862650:intron | 40.0% | |
| CAATACATGAAGAGCTCCTT+GGG | - | chr5_4:62365789-62365808 | Msa0862650:intron | 40.0% | |
| AGATGAACTGGGAAATGAGA+TGG | - | chr5_4:62366015-62366034 | Msa0862650:intron | 40.0% | |
| CAGAGAGCAAAATCCAAAAG+CGG | + | chr5_4:62366081-62366100 | None:intergenic | 40.0% | |
| ! | GATGATGATATGTGGTTTGC+TGG | - | chr5_4:62366241-62366260 | Msa0862650:five_prime_UTR | 40.0% |
| CAAGACATTCAGAAACGACT+AGG | + | chr5_4:62366303-62366322 | None:intergenic | 40.0% | |
| CTAGTCGTTTCTGAATGTCT+TGG | - | chr5_4:62366301-62366320 | Msa0862650:five_prime_UTR | 40.0% | |
| ! | AAGGAAGTTCTTGCTGCTTG+TGG | - | chr5_4:62362330-62362349 | Msa0862650:intron | 45.0% |
| !! | CTGCTTGTGGAAGTATTGAG+TGG | - | chr5_4:62362343-62362362 | Msa0862650:intron | 45.0% |
| !! | TTGTGGAAGTATTGAGTGGC+AGG | - | chr5_4:62362347-62362366 | Msa0862650:intron | 45.0% |
| GTTTAATCTAGATCAGCCGG+AGG | - | chr5_4:62362543-62362562 | Msa0862650:intron | 45.0% | |
| AAAGAAAAACAAGGCTGGGG+AGG | + | chr5_4:62362786-62362805 | None:intergenic | 45.0% | |
| TTGATTGTATCCCTTCCCTG+TGG | - | chr5_4:62362804-62362823 | Msa0862650:intron | 45.0% | |
| TAAGTGTGTGCTTGTGGAGT+TGG | + | chr5_4:62363049-62363068 | None:intergenic | 45.0% | |
| GTAGACTAAGTGTGTGCTTG+TGG | + | chr5_4:62363055-62363074 | None:intergenic | 45.0% | |
| CATGTGTGATAAAGAGAGGC+TGG | + | chr5_4:62363094-62363113 | None:intergenic | 45.0% | |
| AAGTGGAGATTGAAAACCGG+AGG | - | chr5_4:62363268-62363287 | Msa0862650:intron | 45.0% | |
| GCGCACAATTAAGAGAACAG+TGG | - | chr5_4:62363520-62363539 | Msa0862650:intron | 45.0% | |
| AGAACAGTGGAAGCTGGAAA+GGG | - | chr5_4:62363533-62363552 | Msa0862650:intron | 45.0% | |
| CTAGTATAAGTGGGATGCAC+AGG | - | chr5_4:62363576-62363595 | Msa0862650:intron | 45.0% | |
| GGATGCACAGGGAATTAATG+AGG | - | chr5_4:62363588-62363607 | Msa0862650:intron | 45.0% | |
| GTCTAACCAATATGCCTCTG+GGG | - | chr5_4:62363640-62363659 | Msa0862650:intron | 45.0% | |
| ! | CATTATCCCCAGAGGCATAT+TGG | + | chr5_4:62363649-62363668 | None:intergenic | 45.0% |
| CAATTGTGGACGAACGGAAA+TGG | + | chr5_4:62364428-62364447 | None:intergenic | 45.0% | |
| CTGGAACAATTGTGGACGAA+CGG | + | chr5_4:62364434-62364453 | None:intergenic | 45.0% | |
| TGCCGTAACTGGAACAATTG+TGG | + | chr5_4:62364442-62364461 | None:intergenic | 45.0% | |
| TTGCGCAACATCGTTTCTGT+CGG | - | chr5_4:62364492-62364511 | Msa0862650:CDS | 45.0% | |
| AGGAACGTTACTCACAGGAA+AGG | + | chr5_4:62364523-62364542 | None:intergenic | 45.0% | |
| GGTCGATACAGTGAAGGTTA+CGG | + | chr5_4:62364574-62364593 | None:intergenic | 45.0% | |
| !! | TAAAGCGTCGCACACAATGA+AGG | + | chr5_4:62364602-62364621 | None:intergenic | 45.0% |
| TCAACGCAAACAGGGTAACA+TGG | + | chr5_4:62364675-62364694 | None:intergenic | 45.0% | |
| TACTTGGCATTGTTATCCCG+TGG | - | chr5_4:62364703-62364722 | Msa0862650:intron | 45.0% | |
| !! | TGAGATATAGCTTTTGGGGG+TGG | - | chr5_4:62364736-62364755 | Msa0862650:intron | 45.0% |
| ! | CAAAACAGTTGCTGTTGGGT+TGG | - | chr5_4:62364814-62364833 | Msa0862650:intron | 45.0% |
| ! | AAACAGTTGCTGTTGGGTTG+GGG | - | chr5_4:62364816-62364835 | Msa0862650:intron | 45.0% |
| CTGCATCTCATGTTTAAGCC+AGG | - | chr5_4:62364840-62364859 | Msa0862650:intron | 45.0% | |
| ATCTCATGTTTAAGCCAGGG+AGG | - | chr5_4:62364844-62364863 | Msa0862650:intron | 45.0% | |
| TCTCATGTTTAAGCCAGGGA+GGG | - | chr5_4:62364845-62364864 | Msa0862650:intron | 45.0% | |
| GGAGGGTGATTCCCTAATTA+AGG | - | chr5_4:62364862-62364881 | Msa0862650:intron | 45.0% | |
| TCCCTACTGCCAACTCATAA+TGG | + | chr5_4:62364891-62364910 | None:intergenic | 45.0% | |
| ! | TTATGAGTTGGCAGTAGGGA+AGG | - | chr5_4:62364891-62364910 | Msa0862650:intron | 45.0% |
| ! | TATGAGTTGGCAGTAGGGAA+GGG | - | chr5_4:62364892-62364911 | Msa0862650:intron | 45.0% |
| !! | TTGTGGGGTTGGGTTTGTTT+TGG | - | chr5_4:62365319-62365338 | Msa0862650:intron | 45.0% |
| CATTCCTAGAAGGTTCCCTA+AGG | + | chr5_4:62365641-62365660 | None:intergenic | 45.0% | |
| ! | CTTAGGGAACCTTCTAGGAA+TGG | - | chr5_4:62365639-62365658 | Msa0862650:intron | 45.0% |
| TACTGCTATTGATAGGCAGC+AGG | - | chr5_4:62365709-62365728 | Msa0862650:intron | 45.0% | |
| ATATATCAGCTACCTGCCCA+AGG | + | chr5_4:62365808-62365827 | None:intergenic | 45.0% | |
| ! | TCCAAGTGAGTTTCCGCTTT+TGG | - | chr5_4:62366065-62366084 | Msa0862650:intron | 45.0% |
| TCCAAAAGCGGAAACTCACT+TGG | + | chr5_4:62366069-62366088 | None:intergenic | 45.0% | |
| ! | AGTGGCAATGGTGATGAAGA+AGG | - | chr5_4:62366199-62366218 | Msa0862650:five_prime_UTR | 45.0% |
| ATGAAGAAGGCCAGTGCAAA+GGG | - | chr5_4:62366212-62366231 | Msa0862650:five_prime_UTR | 45.0% | |
| ! | GGGCAGATGATGATGATATG+TGG | - | chr5_4:62366233-62366252 | Msa0862650:five_prime_UTR | 45.0% |
| !!! | TATTTTATCATTAAAAAAAA+GGG | + | chr5_4:62361453-62361472 | None:intergenic | 5.0% |
| !!! | ATATTTTATCATTAAAAAAA+AGG | + | chr5_4:62361454-62361473 | None:intergenic | 5.0% |
| CATGGGAAGATCACTTCCTC+CGG | + | chr5_4:62362562-62362581 | None:intergenic | 50.0% | |
| TTGTATCCCTTCCCTGTGGT+AGG | - | chr5_4:62362808-62362827 | Msa0862650:intron | 50.0% | |
| ACCTTTCCTACCACAGGGAA+GGG | + | chr5_4:62362817-62362836 | None:intergenic | 50.0% | |
| TGTGATAAAGAGAGGCTGGC+AGG | + | chr5_4:62363090-62363109 | None:intergenic | 50.0% | |
| TGGAGATTGAAAACCGGAGG+AGG | - | chr5_4:62363271-62363290 | Msa0862650:intron | 50.0% | |
| AGATTGAAAACCGGAGGAGG+TGG | - | chr5_4:62363274-62363293 | Msa0862650:intron | 50.0% | |
| GAGAACAGTGGAAGCTGGAA+AGG | - | chr5_4:62363532-62363551 | Msa0862650:intron | 50.0% | |
| GCGCAAAAACAATGTCGCAC+AGG | + | chr5_4:62364478-62364497 | None:intergenic | 50.0% | |
| TCGCACACAATGAAGGCTAG+GGG | + | chr5_4:62364595-62364614 | None:intergenic | 50.0% | |
| GTCGCACACAATGAAGGCTA+GGG | + | chr5_4:62364596-62364615 | None:intergenic | 50.0% | |
| !! | AACAGTTGCTGTTGGGTTGG+GGG | - | chr5_4:62364817-62364836 | Msa0862650:intron | 50.0% |
| AATTAGGGAATCACCCTCCC+TGG | + | chr5_4:62364861-62364880 | None:intergenic | 50.0% | |
| AAAACCACCTACGAGGCCTT+AGG | - | chr5_4:62365622-62365641 | Msa0862650:intron | 50.0% | |
| AAACCACCTACGAGGCCTTA+GGG | - | chr5_4:62365623-62365642 | Msa0862650:intron | 50.0% | |
| TATTGATAGGCAGCAGGACG+AGG | - | chr5_4:62365715-62365734 | Msa0862650:intron | 50.0% | |
| ! | GTACAGAGAATCGGAGGTGT+TGG | - | chr5_4:62365761-62365780 | Msa0862650:intron | 50.0% |
| GATGAAGAAGGCCAGTGCAA+AGG | - | chr5_4:62366211-62366230 | Msa0862650:five_prime_UTR | 50.0% | |
| TGAAGAAGGCCAGTGCAAAG+GGG | - | chr5_4:62366213-62366232 | Msa0862650:five_prime_UTR | 50.0% | |
| AAAAACAAGGCTGGGGAGGC+GGG | + | chr5_4:62362782-62362801 | None:intergenic | 55.0% | |
| GAAAAACAAGGCTGGGGAGG+CGG | + | chr5_4:62362783-62362802 | None:intergenic | 55.0% | |
| TCCCTTCCCTGTGGTAGGAA+AGG | - | chr5_4:62362813-62362832 | Msa0862650:intron | 55.0% | |
| CACCTTTCCTACCACAGGGA+AGG | + | chr5_4:62362818-62362837 | None:intergenic | 55.0% | |
| TGGACGAACGGAAATGGCAG+GGG | + | chr5_4:62364422-62364441 | None:intergenic | 55.0% | |
| GTGGACGAACGGAAATGGCA+GGG | + | chr5_4:62364423-62364442 | None:intergenic | 55.0% | |
| TGTGGACGAACGGAAATGGC+AGG | + | chr5_4:62364424-62364443 | None:intergenic | 55.0% | |
| ACAATGTCGCACAGGAACGG+TGG | + | chr5_4:62364470-62364489 | None:intergenic | 55.0% | |
| CCTGCAGGAACGTTACTCAC+AGG | + | chr5_4:62364528-62364547 | None:intergenic | 55.0% | |
| CCTGTGAGTAACGTTCCTGC+AGG | - | chr5_4:62364525-62364544 | Msa0862650:CDS | 55.0% | |
| AGGTTACGGCATCACGAGCA+GGG | + | chr5_4:62364560-62364579 | None:intergenic | 55.0% | |
| AAGGTTACGGCATCACGAGC+AGG | + | chr5_4:62364561-62364580 | None:intergenic | 55.0% | |
| GCTAGGGGTCGATACAGTGA+AGG | + | chr5_4:62364580-62364599 | None:intergenic | 55.0% | |
| CGTCGCACACAATGAAGGCT+AGG | + | chr5_4:62364597-62364616 | None:intergenic | 55.0% | |
| GGTAACATGGAGCGCAGGAA+GGG | + | chr5_4:62364662-62364681 | None:intergenic | 55.0% | |
| AACAGGGTAACATGGAGCGC+AGG | + | chr5_4:62364667-62364686 | None:intergenic | 55.0% | |
| AAGGTTCCCTAAGGCCTCGT+AGG | + | chr5_4:62365632-62365651 | None:intergenic | 55.0% | |
| GAGGCCTTAGGGAACCTTCT+AGG | - | chr5_4:62365634-62365653 | Msa0862650:intron | 55.0% | |
| ACATGAAGAGCTCCTTGGGC+AGG | - | chr5_4:62365793-62365812 | Msa0862650:intron | 55.0% | |
| CATCATCTGCCCCTTTGCAC+TGG | + | chr5_4:62366225-62366244 | None:intergenic | 55.0% | |
| AAAACAAGGCTGGGGAGGCG+GGG | + | chr5_4:62362781-62362800 | None:intergenic | 60.0% | |
| CATTGCTGGTCCACCTCCTC+CGG | + | chr5_4:62363287-62363306 | None:intergenic | 60.0% | |
| ! | TACCTGGGTGCGAGCATTGC+TGG | + | chr5_4:62363301-62363320 | None:intergenic | 60.0% |
| GACGAACGGAAATGGCAGGG+GGG | + | chr5_4:62364420-62364439 | None:intergenic | 60.0% | |
| GGACGAACGGAAATGGCAGG+GGG | + | chr5_4:62364421-62364440 | None:intergenic | 60.0% | |
| ATGTCGCACAGGAACGGTGG+CGG | + | chr5_4:62364467-62364486 | None:intergenic | 60.0% | |
| TACGGCATCACGAGCAGGGA+AGG | + | chr5_4:62364556-62364575 | None:intergenic | 60.0% | |
| AGCGCAGGAAGGGAATGGTG+TGG | + | chr5_4:62364652-62364671 | None:intergenic | 60.0% | |
| CATGGAGCGCAGGAAGGGAA+TGG | + | chr5_4:62364657-62364676 | None:intergenic | 60.0% | |
| GGGTAACATGGAGCGCAGGA+AGG | + | chr5_4:62364663-62364682 | None:intergenic | 60.0% | |
| GTTCCCTAAGGCCTCGTAGG+TGG | + | chr5_4:62365629-62365648 | None:intergenic | 60.0% | |
| GACCAGCAATGCTCGCACCC+AGG | - | chr5_4:62363296-62363315 | Msa0862650:intron | 65.0% | |
| AAGGCTGGGGAGGCGGGGAA+AGG | + | chr5_4:62362776-62362795 | None:intergenic | 70.0% | |
| GCAGGGAAGGCTGTGCCTGC+AGG | + | chr5_4:62364543-62364562 | None:intergenic | 70.0% | |
| ! | CGGTGGCGGCGTGCCGTAAC+TGG | + | chr5_4:62364453-62364472 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 62361417 | 62366369 | 62361417 | ID=Msa0862650;Name=Msa0862650 |
| chr5_4 | mRNA | 62361417 | 62366369 | 62361417 | ID=Msa0862650-mRNA-1;Parent=Msa0862650;Name=Msa0862650-mRNA-1;_AED=0.12;_eAED=0.27;_QI=227|0.83|0.85|1|0.83|0.71|7|0|267 |
| chr5_4 | exon | 62361417 | 62361587 | 62361417 | ID=Msa0862650-mRNA-1:exon:19471;Parent=Msa0862650-mRNA-1 |
| chr5_4 | exon | 62361717 | 62361782 | 62361717 | ID=Msa0862650-mRNA-1:exon:19470;Parent=Msa0862650-mRNA-1 |
| chr5_4 | exon | 62361972 | 62362062 | 62361972 | ID=Msa0862650-mRNA-1:exon:19469;Parent=Msa0862650-mRNA-1 |
| chr5_4 | exon | 62364072 | 62364268 | 62364072 | ID=Msa0862650-mRNA-1:exon:19468;Parent=Msa0862650-mRNA-1 |
| chr5_4 | exon | 62364469 | 62364582 | 62364469 | ID=Msa0862650-mRNA-1:exon:19467;Parent=Msa0862650-mRNA-1 |
| chr5_4 | exon | 62365418 | 62365528 | 62365418 | ID=Msa0862650-mRNA-1:exon:19466;Parent=Msa0862650-mRNA-1 |
| chr5_4 | exon | 62366089 | 62366369 | 62366089 | ID=Msa0862650-mRNA-1:exon:19465;Parent=Msa0862650-mRNA-1 |
| chr5_4 | five_prime_UTR | 62366143 | 62366369 | 62366143 | ID=Msa0862650-mRNA-1:five_prime_utr;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62366089 | 62366142 | 62366089 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62365418 | 62365528 | 62365418 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62364469 | 62364582 | 62364469 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62364072 | 62364268 | 62364072 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62361972 | 62362062 | 62361972 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62361717 | 62361782 | 62361717 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| chr5_4 | CDS | 62361417 | 62361587 | 62361417 | ID=Msa0862650-mRNA-1:cds;Parent=Msa0862650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
