AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0684510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684510 MtrunA17_Chr4g0032411 94.661 487 26 0 1 487 1 487 0.0 958
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0684510 AT1G51310.1 77.570 428 91 3 58 485 69 491 0.0 694

Find 148 sgRNAs with CRISPR-Local

Find 733 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTGGTTCTGGTGTAATTT+TGG 0.192938 4_4:+47895847 Msa0684510:CDS
CACACTTCTTGCAGGTTATC+TGG 0.237723 4_4:-47895974 None:intergenic
GGGGAGGCAAAACCTATTTA+TGG 0.240064 4_4:-47896467 None:intergenic
GAATCCTTTCTATCCTTATT+TGG 0.247613 4_4:-47894075 None:intergenic
AAAATTTGATCTACCAAATA+AGG 0.262633 4_4:+47894062 Msa0684510:CDS
TTTATCCGGCATCCGAAAAT+TGG 0.265934 4_4:+47896109 Msa0684510:three_prime_UTR
TTCATTTGACCGATGAATAT+TGG 0.267209 4_4:+47892728 Msa0684510:CDS
CAGAAAGTTTGATGCTAAAC+AGG 0.271960 4_4:+47891265 Msa0684510:intron
GTCAAAGGAAAAGTAATTTC+TGG 0.277431 4_4:-47895494 None:intergenic
ATAAATGTTCCCACGCCTTA+AGG 0.292057 4_4:-47896209 None:intergenic
GAATTTGTTGCAAGACATAT+TGG 0.295559 4_4:+47894413 Msa0684510:CDS
CTGCTTTCTACCTTAAGATA+TGG 0.295813 4_4:+47891640 Msa0684510:CDS
TTGGCAAACATCGGGGCTTC+TGG 0.299286 4_4:+47894480 Msa0684510:CDS
GGCATGGAACAGCGGAGATA+TGG 0.322908 4_4:-47891522 None:intergenic
CGGAATCACACACTTCTTGC+AGG 0.341928 4_4:-47895982 None:intergenic
CGTTGATGTTCATCCGTTTA+CGG 0.354586 4_4:-47891316 None:intergenic
TCCAGTATGCGCAAAAGCTT+TGG 0.358828 4_4:+47895892 Msa0684510:CDS
GAGGTGGTGAAGCGGAGATT+AGG 0.367994 4_4:-47891435 None:intergenic
GTTTAGTGTAAAGAGATGTT+AGG 0.369527 4_4:+47896380 Msa0684510:three_prime_UTR
ATTGGCAAGTAAAGCATCAT+AGG 0.370643 4_4:+47896009 Msa0684510:CDS
TAAATGTTCCCACGCCTTAA+GGG 0.375525 4_4:-47896208 None:intergenic
CTACGATTGTAGCTTAGAAA+TGG 0.381122 4_4:+47895718 Msa0684510:CDS
TTTAGTGTAAAGAGATGTTA+GGG 0.383785 4_4:+47896381 Msa0684510:three_prime_UTR
AGGTGGTGAAGCGGAGATTA+GGG 0.383910 4_4:-47891434 None:intergenic
AACGCGAAAGATGTTGAAAA+TGG 0.384602 4_4:+47891335 Msa0684510:exon
GCTTGTGTTCCAACCGTAAA+CGG 0.386713 4_4:+47891303 Msa0684510:five_prime_UTR
ATGGAAGATAAATCAAAGAT+TGG 0.387486 4_4:+47895926 Msa0684510:CDS
TTTGGATGCAATCGGTGGTA+TGG 0.389723 4_4:+47893413 Msa0684510:CDS
CCATCCATCTCATCTGCAAA+TGG 0.394693 4_4:-47893480 None:intergenic
TGCAATACAAGAATAAAGTT+TGG 0.395012 4_4:+47893273 Msa0684510:CDS
AGATTTCCTTGGCAAACATC+GGG 0.395327 4_4:+47894472 Msa0684510:CDS
TCCACTTGGTTCTATTCCTA+AGG 0.397965 4_4:+47893849 Msa0684510:CDS
TTCTTCTCGTTGCGCGATGT+AGG 0.399396 4_4:-47886539 None:intergenic
AATTTGTTGCAAGACATATT+GGG 0.401161 4_4:+47894414 Msa0684510:CDS
CGCCAGGGTCTACGGCTGCC+TGG 0.404432 4_4:+47894521 Msa0684510:CDS
CTTGTATTGCATAGAACATC+CGG 0.411224 4_4:-47893261 None:intergenic
AAATGGCAGCGCGGTTGAAC+TGG 0.412868 4_4:+47891352 Msa0684510:CDS
GCTTCAGCTGGGACTGAGAT+AGG 0.421345 4_4:-47893816 None:intergenic
CTCCGGCTTCTTCATGCTGC+CGG 0.422213 4_4:+47891606 Msa0684510:CDS
AAATTGCAATGCAAGGTTGT+AGG 0.429940 4_4:+47896270 Msa0684510:three_prime_UTR
AGTGTGTGATTCCGCAGAAT+TGG 0.430127 4_4:+47895991 Msa0684510:CDS
TTGATGCTAAACAGGGACTA+AGG 0.432725 4_4:+47891273 Msa0684510:five_prime_UTR
GATGATCAAGGCCTAGCAGC+TGG 0.432897 4_4:+47895791 Msa0684510:CDS
GCATGTTCTTCCCTCATAGA+AGG 0.435501 4_4:-47895825 None:intergenic
TGCTAGAGATGTTTGCAATC+AGG 0.437177 4_4:+47891839 Msa0684510:CDS
AATTGCAATGCAAGGTTGTA+GGG 0.439232 4_4:+47896271 Msa0684510:three_prime_UTR
CCTACATCATTGAAGAGTAT+AGG 0.445194 4_4:+47893220 Msa0684510:CDS
GTGTGGTCGAACTCCGAATC+CGG 0.446590 4_4:+47893242 Msa0684510:CDS
GGAAGAACATGCATTGGTTC+TGG 0.448272 4_4:+47895836 Msa0684510:CDS
TGCATCGAAGCTGACTTCTC+TGG 0.455195 4_4:-47895576 None:intergenic
AAATATAAAACGCTAGGTAC+TGG 0.460166 4_4:+47896182 Msa0684510:three_prime_UTR
TTGCATAGAACATCCGGATT+CGG 0.462280 4_4:-47893255 None:intergenic
GAGATTTCCTTGGCAAACAT+CGG 0.464304 4_4:+47894471 Msa0684510:CDS
CTAGGTACTGGTCTCCCTTA+AGG 0.465826 4_4:+47896194 Msa0684510:three_prime_UTR
GGGACTGAGATAGGTGTGAT+AGG 0.470335 4_4:-47893807 None:intergenic
TTGGATGCAATCGGTGGTAT+GGG 0.473887 4_4:+47893414 Msa0684510:CDS
ATACTTGGAACCATATCTTA+AGG 0.474173 4_4:-47891650 None:intergenic
TGGAAGATAAATCAAAGATT+GGG 0.477501 4_4:+47895927 Msa0684510:CDS
GGGAGGCAAAACCTATTTAT+GGG 0.478679 4_4:-47896466 None:intergenic
ATCATACTGGAAGCTGAGAC+TGG 0.480042 4_4:+47894449 Msa0684510:CDS
GGGACAAACCATGGACCTCC+AGG 0.480074 4_4:-47894539 None:intergenic
CTGTGAACTGCCCAGCTGCT+AGG 0.480633 4_4:-47895802 None:intergenic
AGGTGATGTTTGAAGAGAAT+CGG 0.484439 4_4:-47891472 None:intergenic
GGCATGTGCACACATGTGTT+AGG 0.485453 4_4:+47896134 Msa0684510:three_prime_UTR
GCTGAGACTGGAGATTTCCT+TGG 0.485800 4_4:+47894461 Msa0684510:CDS
GTAAAATAATTTGAAGAGAG+AGG 0.493406 4_4:+47896354 Msa0684510:three_prime_UTR
GCATGGAACAGCGGAGATAT+GGG 0.493552 4_4:-47891521 None:intergenic
GCGGAGATATGGGTCGAGTT+CGG 0.495250 4_4:-47891511 None:intergenic
AGCTTTGGAAATTGCACGAA+TGG 0.495586 4_4:+47895907 Msa0684510:CDS
CATCCATCTCATCTGCAAAT+GGG 0.499860 4_4:-47893479 None:intergenic
CTACTTTAAATTGCAATGCA+AGG 0.500036 4_4:+47896263 Msa0684510:three_prime_UTR
TGTAGCTTAGAAATGGAACT+TGG 0.500072 4_4:+47895725 Msa0684510:CDS
TCTACCAAATAAGGATAGAA+AGG 0.501239 4_4:+47894071 Msa0684510:CDS
GGAGAAAGAAGGCATCATAC+TGG 0.502575 4_4:+47894436 Msa0684510:CDS
TCCGGCATCCGAAAATTGGC+AGG 0.503125 4_4:+47896113 Msa0684510:three_prime_UTR
AGATGTTAGGGGAAAGATCA+AGG 0.505113 4_4:+47896393 Msa0684510:three_prime_UTR
GGCAAAACCTATTTATGGGG+GGG 0.506293 4_4:-47896462 None:intergenic
CCACCCATTTGCAGATGAGA+TGG 0.509813 4_4:+47893476 Msa0684510:CDS
GATGTTCATCCGTTTACGGT+TGG 0.510524 4_4:-47891312 None:intergenic
TTATACTATTGGTCAACGCC+AGG 0.512411 4_4:+47894505 Msa0684510:CDS
GAGTGGCTTCTGCTGCGGCA+TGG 0.512805 4_4:-47891538 None:intergenic
AAAGGCGCATATTCCGTGTT+GGG 0.512934 4_4:+47895521 Msa0684510:CDS
CCTATACTCTTCAATGATGT+AGG 0.515602 4_4:-47893220 None:intergenic
CCATTTGCAGATGAGATGGA+TGG 0.518360 4_4:+47893480 Msa0684510:CDS
TAAGGATAGAAAGGATTCCC+AGG 0.521925 4_4:+47894080 Msa0684510:CDS
GACCGGCAGCATGAAGAAGC+CGG 0.531818 4_4:-47891608 None:intergenic
TGATGCTAAACAGGGACTAA+GGG 0.535221 4_4:+47891274 Msa0684510:five_prime_UTR
TACGGCTGCCTGGAGGTCCA+TGG 0.536032 4_4:+47894531 Msa0684510:CDS
CATTCTCTGACTTGCTGTAG+AGG 0.537952 4_4:-47896329 None:intergenic
CTACAGCAAGTCAGAGAATG+AGG 0.538286 4_4:+47896332 Msa0684510:three_prime_UTR
GAGAAGTCAGCTTCGATGCA+AGG 0.540790 4_4:+47895579 Msa0684510:CDS
GAAAGCAGTGCAAGAATGAC+CGG 0.545314 4_4:-47891625 None:intergenic
AGGCAAAACCTATTTATGGG+GGG 0.547265 4_4:-47896463 None:intergenic
TCGACAGCAGCGTTGCTCTC+CGG 0.547360 4_4:+47891589 Msa0684510:CDS
TTGGTCAACGCCAGGGTCTA+CGG 0.548433 4_4:+47894513 Msa0684510:CDS
AAAAGGCGCATATTCCGTGT+TGG 0.550237 4_4:+47895520 Msa0684510:CDS
TATGAGGGAAGAACATGCAT+TGG 0.551622 4_4:+47895830 Msa0684510:CDS
GCAGTTCACAGCCTTCTATG+AGG 0.552825 4_4:+47895814 Msa0684510:CDS
CGAAGCTGACTTCTCTGGCT+AGG 0.553259 4_4:-47895571 None:intergenic
CTCCAGGCAGCCGTAGACCC+TGG 0.556893 4_4:-47894523 None:intergenic
TACTGGTCTCCCTTAAGGCG+TGG 0.557287 4_4:+47896199 Msa0684510:three_prime_UTR
ATTTGTTGCAAGACATATTG+GGG 0.559794 4_4:+47894415 Msa0684510:CDS
GAGGCAAAACCTATTTATGG+GGG 0.560580 4_4:-47896464 None:intergenic
ATCTGCAGGATGAAGTCCGC+AGG 0.561896 4_4:+47894031 Msa0684510:intron
AGACATATTGGGGAGAAAGA+AGG 0.563596 4_4:+47894425 Msa0684510:CDS
GGAGGCAAAACCTATTTATG+GGG 0.564879 4_4:-47896465 None:intergenic
ATGCAGGTATGTTGTTGAGA+AGG 0.566844 4_4:+47895444 Msa0684510:intron
CAGTTCACAGCCTTCTATGA+GGG 0.575987 4_4:+47895815 Msa0684510:CDS
TCTGCTGCGGCATGGAACAG+CGG 0.576594 4_4:-47891530 None:intergenic
TGGAAAACTTTGATCATCCC+CGG 0.577452 4_4:-47895873 None:intergenic
CGCATATCTGAAGATGATCA+AGG 0.577500 4_4:+47895779 Msa0684510:CDS
TGCTTTACTTGCCAATTCTG+CGG 0.578853 4_4:-47896002 None:intergenic
TGCCTCTGGGCATTATGCGA+AGG 0.583134 4_4:+47893449 Msa0684510:CDS
TGTGATAGTTCTAGAGCAGA+AGG 0.584218 4_4:-47893504 None:intergenic
TATACTATTGGTCAACGCCA+GGG 0.586094 4_4:+47894506 Msa0684510:CDS
CATTTGCAGATGAGATGGAT+GGG 0.587000 4_4:+47893481 Msa0684510:CDS
TTGGCAAGTAAAGCATCATA+GGG 0.588703 4_4:+47896010 Msa0684510:CDS
ATGATCAAGGCCTAGCAGCT+GGG 0.590945 4_4:+47895792 Msa0684510:CDS
TCGAGTTCGGCATTGAGAGA+AGG 0.601659 4_4:-47891498 None:intergenic
GCCATTTAAAAGACCCAACA+CGG 0.604540 4_4:-47895534 None:intergenic
CACTGATAAGAACAGCGACT+CGG 0.605096 4_4:-47891560 None:intergenic
AGCTGACTTCTCTGGCTAGG+AGG 0.606523 4_4:-47895568 None:intergenic
ACTGGTCTCCCTTAAGGCGT+GGG 0.609375 4_4:+47896200 Msa0684510:three_prime_UTR
GTCGCTGTTCTTATCAGTGG+CGG 0.611053 4_4:+47891564 Msa0684510:CDS
CGAGTCGCTGTTCTTATCAG+TGG 0.614436 4_4:+47891561 Msa0684510:CDS
ACTCGGAGTGGCTTCTGCTG+CGG 0.622172 4_4:-47891543 None:intergenic
TACTTCAAATCATCTTCCCA+AGG 0.623099 4_4:-47891816 None:intergenic
CCATCTCATCTGCAAATGGG+TGG 0.623548 4_4:-47893476 None:intergenic
GTCAAATGAACAACTTCTAG+TGG 0.626446 4_4:-47892715 None:intergenic
AGAAGCCCCGATGTTTGCCA+AGG 0.626987 4_4:-47894478 None:intergenic
CAGGGTCTACGGCTGCCTGG+AGG 0.630159 4_4:+47894524 Msa0684510:CDS
AAGGATAGAAAGGATTCCCA+GGG 0.639476 4_4:+47894081 Msa0684510:CDS
GATGCTAAACAGGGACTAAG+GGG 0.645188 4_4:+47891275 Msa0684510:five_prime_UTR
ATCATTGAAGAGTATAGGTG+TGG 0.645225 4_4:+47893225 Msa0684510:CDS
AGAAAGTTTGATGCTAAACA+GGG 0.646043 4_4:+47891266 Msa0684510:intron
ATAAGAACAGCGACTCGGAG+TGG 0.651106 4_4:-47891555 None:intergenic
GATTTCCTTGGCAAACATCG+GGG 0.658683 4_4:+47894473 Msa0684510:CDS
TCGGCATTGAGAGAAGGTGA+AGG 0.662169 4_4:-47891492 None:intergenic
CTTGATCATCTTCAGATATG+CGG 0.670803 4_4:-47895778 None:intergenic
ACCTTAGGAATAGAACCAAG+TGG 0.681518 4_4:-47893850 None:intergenic
TAAGCTACAATCGTAGAACA+CGG 0.685925 4_4:-47895711 None:intergenic
AAGCTACAATCGTAGAACAC+GGG 0.687382 4_4:-47895710 None:intergenic
ATGCTAAACAGGGACTAAGG+GGG 0.703915 4_4:+47891276 Msa0684510:five_prime_UTR
TCTAGAACTATCACAAGACA+CGG 0.705464 4_4:+47893512 Msa0684510:CDS
GATAGAGAGAGAGAACAGAG+TGG 0.711778 4_4:-47891378 None:intergenic
TTAGTGTAAAGAGATGTTAG+GGG 0.727941 4_4:+47896382 Msa0684510:three_prime_UTR
AACCTTCGCATAATGCCCAG+AGG 0.738468 4_4:-47893451 None:intergenic
AGATGTTGAAAATGGCAGCG+CGG 0.795890 4_4:+47891343 Msa0684510:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAAAAAAATAATATTTA+TGG - chr4_4:47891725-47891744 None:intergenic 0.0%
!!! AAATATTATTTTTTTAATTA+AGG + chr4_4:47891726-47891745 Msa0684510:intron 0.0%
!!! AATTATTTAAAGTAAACATT+GGG + chr4_4:47888825-47888844 Msa0684510:intron 10.0%
!!! CTTTTTAAGTTTTTTTTTTT+CGG + chr4_4:47891191-47891210 Msa0684510:intron 10.0%
!! TATATAGGATATTTATATAT+GGG - chr4_4:47892315-47892334 None:intergenic 10.0%
!! AAATAATTAGTATACTATAT+AGG - chr4_4:47892330-47892349 None:intergenic 10.0%
!! TTAAATTATTTATCTAAACA+TGG + chr4_4:47893098-47893117 Msa0684510:intron 10.0%
!! TAAAAATAAAATGATACTTA+TGG + chr4_4:47894230-47894249 Msa0684510:intron 10.0%
!!! TATTTTTAAAATTACAGTTT+TGG - chr4_4:47894933-47894952 None:intergenic 10.0%
!!! TATTTAGAATAAGTATTTTT+TGG + chr4_4:47896229-47896248 Msa0684510:three_prime_UTR 10.0%
!!! TTATTATTTTTTACAAGATA+GGG - chr4_4:47896490-47896509 None:intergenic 10.0%
!!! TTTATTATTTTTTACAAGAT+AGG - chr4_4:47896491-47896510 None:intergenic 10.0%
!! TAAGAATAAGAAATAAAAAG+TGG - chr4_4:47886812-47886831 None:intergenic 15.0%
!!! ATATTTTGCAAATAACTTAT+CGG + chr4_4:47887434-47887453 Msa0684510:intron 15.0%
!!! CAATTATTTAAAGTAAACAT+TGG + chr4_4:47888824-47888843 Msa0684510:intron 15.0%
!!! ATTATTTAAAGTAAACATTG+GGG + chr4_4:47888826-47888845 Msa0684510:intron 15.0%
!! AAAAGAAAAAAAGAAAAACA+AGG - chr4_4:47889137-47889156 None:intergenic 15.0%
!! AAATTAATAAATAAATGGGT+TGG - chr4_4:47889433-47889452 None:intergenic 15.0%
!! GAGCAAATTAATAAATAAAT+GGG - chr4_4:47889437-47889456 None:intergenic 15.0%
!! TGAGCAAATTAATAAATAAA+TGG - chr4_4:47889438-47889457 None:intergenic 15.0%
!! ATTTGCTCATATAATTAAAA+CGG + chr4_4:47889449-47889468 Msa0684510:intron 15.0%
!! ATTTATTTGTGATGAAAATT+CGG + chr4_4:47889717-47889736 Msa0684510:intron 15.0%
!!! AGAAAAAAAATCACAAATTT+TGG + chr4_4:47890200-47890219 Msa0684510:intron 15.0%
!!! TCTCAATTATAAATTTTGAA+CGG - chr4_4:47890577-47890596 None:intergenic 15.0%
!!! TTTCTTTTGTAAAAATTTGT+AGG + chr4_4:47890692-47890711 Msa0684510:intron 15.0%
!! AGGTTGAATAATAAATATTT+AGG + chr4_4:47890712-47890731 Msa0684510:intron 15.0%
!! ATTGCACAATAAAAAAATTT+AGG - chr4_4:47890881-47890900 None:intergenic 15.0%
!!! TTTTTTAATTAAGGTGAAAT+TGG + chr4_4:47891735-47891754 Msa0684510:intron 15.0%
!!! TTTTTAATTAAGGTGAAATT+GGG + chr4_4:47891736-47891755 Msa0684510:intron 15.0%
!!! ATTTTTAACTTAAATCAATC+TGG - chr4_4:47891939-47891958 None:intergenic 15.0%
!! CTATATAGGATATTTATATA+TGG - chr4_4:47892316-47892335 None:intergenic 15.0%
!!! TGATTTTGTAAAATTGATTA+TGG - chr4_4:47892573-47892592 None:intergenic 15.0%
!! AGAATGTTTGATATAATTTA+TGG + chr4_4:47892907-47892926 Msa0684510:intron 15.0%
!!! TTTGACTTTATTTTATCTTT+TGG + chr4_4:47893029-47893048 Msa0684510:intron 15.0%
!!! GATTTTTTTTTTTTTTTGGA+GGG - chr4_4:47893680-47893699 None:intergenic 15.0%
!!! TGATTTTTTTTTTTTTTTGG+AGG - chr4_4:47893681-47893700 None:intergenic 15.0%
!!! ATATCATTTAACTTTTTCAT+AGG + chr4_4:47893905-47893924 Msa0684510:intron 15.0%
!! AAAAAACTAAAACATGTAAA+AGG - chr4_4:47894878-47894897 None:intergenic 15.0%
!!! AAAAACTAAAAAAGAGTTTT+TGG + chr4_4:47894987-47895006 Msa0684510:intron 15.0%
!! AAAAAAAATCAAATGAATCA+AGG - chr4_4:47895149-47895168 None:intergenic 15.0%
!!! CAATAAATATTTGCTTTTTA+TGG + chr4_4:47895288-47895307 Msa0684510:intron 15.0%
!! AAAAATAAATATAAAACGCT+AGG + chr4_4:47896176-47896195 Msa0684510:three_prime_UTR 15.0%
!!! TATTATTTTTTACAAGATAG+GGG - chr4_4:47896489-47896508 None:intergenic 15.0%
!!! TATTGAATAATTTTTGCCAT+TGG - chr4_4:47886675-47886694 None:intergenic 20.0%
!! AATAAGAAATAAAAAGTGGT+GGG - chr4_4:47886808-47886827 None:intergenic 20.0%
!! TTATTTGCAAAATATCAAGA+GGG - chr4_4:47887429-47887448 None:intergenic 20.0%
!!! TATTTTGCAAATAACTTATC+GGG + chr4_4:47887435-47887454 Msa0684510:intron 20.0%
!! TAGATAGTATGTCATATTAT+AGG + chr4_4:47887521-47887540 Msa0684510:intron 20.0%
!! AGATAGTATGTCATATTATA+GGG + chr4_4:47887522-47887541 Msa0684510:intron 20.0%
!! AGTTTAAACAATATTCAAGT+TGG + chr4_4:47888414-47888433 Msa0684510:intron 20.0%
!!! AATTATTTAAAGCAACATTG+AGG + chr4_4:47888786-47888805 Msa0684510:intron 20.0%
!! CACTAATATTTGTTTGTATT+CGG - chr4_4:47888876-47888895 None:intergenic 20.0%
!! GAAAAACAAATTGAAGAAAA+TGG - chr4_4:47888994-47889013 None:intergenic 20.0%
!! AATTTACTTTAATGGAAGAA+TGG - chr4_4:47889312-47889331 None:intergenic 20.0%
!! GAATGTTCAATTTACTTTAA+TGG - chr4_4:47889320-47889339 None:intergenic 20.0%
!! TCATATAATTAAAACGGTTT+CGG + chr4_4:47889455-47889474 Msa0684510:intron 20.0%
!!! AAAATTTGGTGTTAATTAGT+GGG - chr4_4:47889606-47889625 None:intergenic 20.0%
!! TTTATTTGTGATGAAAATTC+GGG + chr4_4:47889718-47889737 Msa0684510:intron 20.0%
!! TTTGGTTGAGAAATATATTT+GGG + chr4_4:47889914-47889933 Msa0684510:intron 20.0%
!!! ATTTTTACACTCAAAATTTC+CGG - chr4_4:47891979-47891998 None:intergenic 20.0%
!! TTTATGATATCGTATCAAAT+TGG - chr4_4:47892093-47892112 None:intergenic 20.0%
!! TATCTCTATTAAGAAATTAG+AGG + chr4_4:47892146-47892165 Msa0684510:intron 20.0%
!! TATAATGTGTTGTATGTTAA+TGG - chr4_4:47892212-47892231 None:intergenic 20.0%
!! TTAATACTATCACAATTCTA+CGG + chr4_4:47892368-47892387 Msa0684510:intron 20.0%
!!! GTATTTATTTCATTGTTTTC+AGG + chr4_4:47892684-47892703 Msa0684510:intron 20.0%
!! AAATTCTAGTAATATGTTAC+TGG - chr4_4:47892798-47892817 None:intergenic 20.0%
!! GTCAATTCAAAATTACAAAT+AGG - chr4_4:47892852-47892871 None:intergenic 20.0%
!! TAATTTATGGAAACAACTTA+TGG + chr4_4:47892920-47892939 Msa0684510:intron 20.0%
!!! CTTATTTCTACAAACTATTT+AGG + chr4_4:47892967-47892986 Msa0684510:intron 20.0%
!! TAGAACATATTCATTAACTT+AGG - chr4_4:47893124-47893143 None:intergenic 20.0%
!! TTAGTATGAACAATTTACTT+AGG - chr4_4:47893640-47893659 None:intergenic 20.0%
!! AAAATTTGATCTACCAAATA+AGG + chr4_4:47894062-47894081 Msa0684510:CDS 20.0%
!! TATAACTTTGAACAAAGTAA+TGG - chr4_4:47894313-47894332 None:intergenic 20.0%
!! AGTTAGTTAGTTAGTTAATT+AGG + chr4_4:47894695-47894714 Msa0684510:intron 20.0%
!! AAACAAAAACTAATTCAAAC+AGG - chr4_4:47894813-47894832 None:intergenic 20.0%
!!! TCTTGAATTTTTTAGTTTTG+GGG - chr4_4:47894904-47894923 None:intergenic 20.0%
!!! GTCTTGAATTTTTTAGTTTT+GGG - chr4_4:47894905-47894924 None:intergenic 20.0%
!!! TGTCTTGAATTTTTTAGTTT+TGG - chr4_4:47894906-47894925 None:intergenic 20.0%
!! CAATGTATAATTTCTTTCTT+TGG - chr4_4:47895221-47895240 None:intergenic 20.0%
!! CAAAGAAAGAAATTATACAT+TGG + chr4_4:47895219-47895238 Msa0684510:intron 20.0%
!!! ATGACGTTTTTTTTTTTTGA+GGG + chr4_4:47895341-47895360 Msa0684510:intron 20.0%
!!! GGTCATTTGAAAATTTTATT+TGG + chr4_4:47895362-47895381 Msa0684510:intron 20.0%
!!! TTTAAATTTTCCCTTTTATC+CGG + chr4_4:47896095-47896114 Msa0684510:three_prime_UTR 20.0%
!!! TTAGAATAAGTATTTTTTGG+AGG + chr4_4:47896232-47896251 Msa0684510:three_prime_UTR 20.0%
!!! TAGAATAAGTATTTTTTGGA+GGG + chr4_4:47896233-47896252 Msa0684510:three_prime_UTR 20.0%
! ATAAGAAATAAAAAGTGGTG+GGG - chr4_4:47886807-47886826 None:intergenic 25.0%
! GAATAAGAAATAAAAAGTGG+TGG - chr4_4:47886809-47886828 None:intergenic 25.0%
! ATTACACAATATGATTGTTG+AGG - chr4_4:47887286-47887305 None:intergenic 25.0%
! GTTATTTGCAAAATATCAAG+AGG - chr4_4:47887430-47887449 None:intergenic 25.0%
! GATAGTATGTCATATTATAG+GGG + chr4_4:47887523-47887542 Msa0684510:intron 25.0%
!! ATGATATAAACGTTCTAGAT+CGG - chr4_4:47887603-47887622 None:intergenic 25.0%
! TAGTGTTTAGAAGTAGATAT+TGG + chr4_4:47888358-47888377 Msa0684510:intron 25.0%
! ATATGAATGCAATTTGAGAA+AGG + chr4_4:47888387-47888406 Msa0684510:intron 25.0%
! CACCTATTTGCTTATATATA+GGG - chr4_4:47888465-47888484 None:intergenic 25.0%
! TCACCTATTTGCTTATATAT+AGG - chr4_4:47888466-47888485 None:intergenic 25.0%
! AAAGTTTGTGAAAAAAGTCA+CGG + chr4_4:47888747-47888766 Msa0684510:intron 25.0%
!!! CAAAATTTGGTGTTAATTAG+TGG - chr4_4:47889607-47889626 None:intergenic 25.0%
!! TTTTCATCACAAATAAATCG+TGG - chr4_4:47889715-47889734 None:intergenic 25.0%
!! TGAGAATTTTCATTCATCAT+CGG + chr4_4:47889757-47889776 Msa0684510:intron 25.0%
! CCATATTATAGATCTATGAT+GGG - chr4_4:47889820-47889839 None:intergenic 25.0%
! TCCATATTATAGATCTATGA+TGG - chr4_4:47889821-47889840 None:intergenic 25.0%
! TAATATGGATGAAAGTTGTT+TGG + chr4_4:47889832-47889851 Msa0684510:intron 25.0%
! GTTTGGTTGAGAAATATATT+TGG + chr4_4:47889913-47889932 Msa0684510:intron 25.0%
!!! AGAAATATATTTGGGTTTTG+AGG + chr4_4:47889922-47889941 Msa0684510:intron 25.0%
!! GTGTTGAATTGATTGTTATT+GGG + chr4_4:47890057-47890076 Msa0684510:intron 25.0%
!! TTAGTCTTTGATTAGTGAAA+TGG - chr4_4:47890085-47890104 None:intergenic 25.0%
! TTTCTCTATAAATAGAGACT+TGG - chr4_4:47890185-47890204 None:intergenic 25.0%
! TATTTCCATCGAAATAATTG+AGG + chr4_4:47890238-47890257 Msa0684510:intron 25.0%
! CTTGTAAAAATTGCAATTGT+GGG + chr4_4:47890613-47890632 Msa0684510:intron 25.0%
!!! AAAATTGATTTTGAGTGCAT+TGG + chr4_4:47891908-47891927 Msa0684510:intron 25.0%
!! TTTTTACACTCAAAATTTCC+GGG - chr4_4:47891978-47891997 None:intergenic 25.0%
!!! ATTGATTTTAACTAGAAGGT+AGG - chr4_4:47892020-47892039 None:intergenic 25.0%
!!! GAGAATTGATTTTAACTAGA+AGG - chr4_4:47892024-47892043 None:intergenic 25.0%
! ATAATTATTCCAATTCGAGA+AGG + chr4_4:47892121-47892140 Msa0684510:intron 25.0%
! TTAATTAGAAGCAGTTATGT+TGG - chr4_4:47892248-47892267 None:intergenic 25.0%
! TAGTTAGTAGAAGTTAAGAA+AGG - chr4_4:47892292-47892311 None:intergenic 25.0%
!! AAAGTTGAAATAAGTTCTAG+AGG - chr4_4:47892424-47892443 None:intergenic 25.0%
! TTGTAGAAATAAGCTGAAAA+CGG - chr4_4:47892960-47892979 None:intergenic 25.0%
! TGCAATACAAGAATAAAGTT+TGG + chr4_4:47893273-47893292 Msa0684510:CDS 25.0%
! AAAACACAACAAACTACAAT+TGG - chr4_4:47893323-47893342 None:intergenic 25.0%
! TTAGTCAGAAAAACATTGTT+AGG + chr4_4:47893723-47893742 Msa0684510:intron 25.0%
! TATATCACTACATGATGTTA+TGG + chr4_4:47893972-47893991 Msa0684510:intron 25.0%
!! ATTTGGTAGATCAAATTTTG+CGG - chr4_4:47894061-47894080 None:intergenic 25.0%
! TCCAATGTTTGACAAATATA+TGG + chr4_4:47894159-47894178 Msa0684510:intron 25.0%
!!! AATTTGTTGCAAGACATATT+GGG + chr4_4:47894414-47894433 Msa0684510:CDS 25.0%
!! CTAACTAACATCTAAAGTAA+CGG - chr4_4:47894677-47894696 None:intergenic 25.0%
! AGGCTTATCATCTATAAATA+AGG + chr4_4:47894744-47894763 Msa0684510:intron 25.0%
! TCTTGTTAATTGAGTGATTT+AGG + chr4_4:47894786-47894805 Msa0684510:intron 25.0%
! CTTGTTAATTGAGTGATTTA+GGG + chr4_4:47894787-47894806 Msa0684510:intron 25.0%
!!! CTGTAATGTACTTTTTAACT+TGG + chr4_4:47895089-47895108 Msa0684510:intron 25.0%
! AACTTGGATCATTAATTGAA+AGG + chr4_4:47895105-47895124 Msa0684510:intron 25.0%
! AAAAATCAAATGAATCAAGG+TGG - chr4_4:47895146-47895165 None:intergenic 25.0%
!!! CATGACGTTTTTTTTTTTTG+AGG + chr4_4:47895340-47895359 Msa0684510:intron 25.0%
!!! AGGGATATTTTTTTCAAACA+CGG - chr4_4:47895414-47895433 None:intergenic 25.0%
!! ACTTTTCCTTTGACAAAAAA+AGG + chr4_4:47895503-47895522 Msa0684510:CDS 25.0%
! ATGGAAGATAAATCAAAGAT+TGG + chr4_4:47895926-47895945 Msa0684510:CDS 25.0%
! TGGAAGATAAATCAAAGATT+GGG + chr4_4:47895927-47895946 Msa0684510:CDS 25.0%
!!! GGTTTAACTTTTATCTTAAC+TGG - chr4_4:47895956-47895975 None:intergenic 25.0%
! GTAAAATAATTTGAAGAGAG+AGG + chr4_4:47896354-47896373 Msa0684510:three_prime_UTR 25.0%
! TTTAGTGTAAAGAGATGTTA+GGG + chr4_4:47896381-47896400 Msa0684510:three_prime_UTR 25.0%
TTAAGAGAGAGAAAATGATG+TGG - chr4_4:47886732-47886751 None:intergenic 30.0%
TGGAGTGGTAAAAATTGAAT+GGG - chr4_4:47886762-47886781 None:intergenic 30.0%
TTGGAGTGGTAAAAATTGAA+TGG - chr4_4:47886763-47886782 None:intergenic 30.0%
TTGAATGAAAACTATTGGAG+TGG - chr4_4:47886777-47886796 None:intergenic 30.0%
!! CTAATTGATTTGACGAAAGT+TGG + chr4_4:47887474-47887493 Msa0684510:intron 30.0%
TTTATATCATTCAACGTTCC+CGG + chr4_4:47887613-47887632 Msa0684510:intron 30.0%
GAAAAATTGTCCTAAAGCAT+GGG - chr4_4:47887737-47887756 None:intergenic 30.0%
TACTACATGTTAGTGAAATG+CGG - chr4_4:47887807-47887826 None:intergenic 30.0%
TAACATGTAGTATTCTTTGC+AGG + chr4_4:47887815-47887834 Msa0684510:intron 30.0%
GTCGATGAATACATCAAAAT+AGG - chr4_4:47887934-47887953 None:intergenic 30.0%
AGTAGTTATCACTACTTGAA+AGG + chr4_4:47888055-47888074 Msa0684510:intron 30.0%
!! TTTTTCGACGCTGAATAAAT+CGG + chr4_4:47888261-47888280 Msa0684510:intron 30.0%
GCTTTCATATCAAAACCAAA+AGG + chr4_4:47888326-47888345 Msa0684510:intron 30.0%
CTACTTCTAAACACTATCAA+TGG - chr4_4:47888354-47888373 None:intergenic 30.0%
GTCCCTATATATAAGCAAAT+AGG + chr4_4:47888460-47888479 Msa0684510:intron 30.0%
GCATAATTAAAGCAATACCA+TGG + chr4_4:47888617-47888636 Msa0684510:intron 30.0%
TGCATAATAAAGCAATACCA+TGG + chr4_4:47888682-47888701 Msa0684510:intron 30.0%
GCATAATAAAGCAATACCAT+GGG + chr4_4:47888683-47888702 Msa0684510:intron 30.0%
AAGTTTGTGAAAAAAGTCAC+GGG + chr4_4:47888748-47888767 Msa0684510:intron 30.0%
! TAAAGAGTACACCGAAAAAA+TGG - chr4_4:47889041-47889060 None:intergenic 30.0%
GGTTCAATTCAAAGAAATGA+AGG - chr4_4:47889083-47889102 None:intergenic 30.0%
! ATTAGTGGGTGGATAAAATA+TGG - chr4_4:47889592-47889611 None:intergenic 30.0%
ATGGAACACTGAACAAAATT+TGG - chr4_4:47889620-47889639 None:intergenic 30.0%
AATGAAAATTCTCAGAGTCT+TGG - chr4_4:47889751-47889770 None:intergenic 30.0%
ATCGGCATATAACCATTATA+TGG + chr4_4:47889775-47889794 Msa0684510:intron 30.0%
TCGGCATATAACCATTATAT+GGG + chr4_4:47889776-47889795 Msa0684510:intron 30.0%
CCCATCATAGATCTATAATA+TGG + chr4_4:47889817-47889836 Msa0684510:intron 30.0%
! TTTGAGGCAAAACCAAAATT+AGG + chr4_4:47889877-47889896 Msa0684510:intron 30.0%
!! TGTTGGTTTGGAAATTGATT+TGG + chr4_4:47889946-47889965 Msa0684510:intron 30.0%
!! GTTGGTTTGGAAATTGATTT+GGG + chr4_4:47889947-47889966 Msa0684510:intron 30.0%
!! ATTTGGGTGTTGATAATTGT+TGG + chr4_4:47889996-47890015 Msa0684510:intron 30.0%
!! TTTGGGTGTTGATAATTGTT+GGG + chr4_4:47889997-47890016 Msa0684510:intron 30.0%
!!! GTTGATAATTGTTGGGATTT+TGG + chr4_4:47890004-47890023 Msa0684510:intron 30.0%
! TGGGTAATCAGAAGAATTTT+GGG + chr4_4:47890035-47890054 Msa0684510:intron 30.0%
! GGTGTTGAATTGATTGTTAT+TGG + chr4_4:47890056-47890075 Msa0684510:intron 30.0%
TTTGTCCTCAATTATTTCGA+TGG - chr4_4:47890246-47890265 None:intergenic 30.0%
ATTGAAACCTATTGAACCAT+TGG - chr4_4:47890505-47890524 None:intergenic 30.0%
ATGGTTCAATAGGTTTCAAT+AGG + chr4_4:47890505-47890524 Msa0684510:intron 30.0%
! CCACAATTGCAATTTTTACA+AGG - chr4_4:47890615-47890634 None:intergenic 30.0%
CCTTGTAAAAATTGCAATTG+TGG + chr4_4:47890612-47890631 Msa0684510:intron 30.0%
TCTAGAAAAACTTTACGAGA+GGG + chr4_4:47890661-47890680 Msa0684510:intron 30.0%
GAAGTAAAAATGAACCCTTA+CGG + chr4_4:47890780-47890799 Msa0684510:intron 30.0%
AATTGCCAGATAAACGATTT+GGG - chr4_4:47891105-47891124 None:intergenic 30.0%
AAATTGCCAGATAAACGATT+TGG - chr4_4:47891106-47891125 None:intergenic 30.0%
AGCATCAAACTTTCTGATAA+AGG - chr4_4:47891261-47891280 None:intergenic 30.0%
AGAAAGTTTGATGCTAAACA+GGG + chr4_4:47891266-47891285 Msa0684510:intron 30.0%
ATACTTGGAACCATATCTTA+AGG - chr4_4:47891653-47891672 None:intergenic 30.0%
AAAATGGAAGAAGACATACT+TGG - chr4_4:47891668-47891687 None:intergenic 30.0%
CGTTTAACGAATGCAAAAAA+TGG - chr4_4:47891684-47891703 None:intergenic 30.0%
!! TTGCTTTTGTGATTTTGTGT+AGG + chr4_4:47891764-47891783 Msa0684510:intron 30.0%
!! AGGAAGATTTTGACAACTTT+TGG + chr4_4:47891784-47891803 Msa0684510:intron 30.0%
!! AGATTTTGACAACTTTTGGA+CGG + chr4_4:47891788-47891807 Msa0684510:CDS 30.0%
! ATCCTTATTTAGTGTGTGTT+TGG + chr4_4:47891872-47891891 Msa0684510:intron 30.0%
AACCAAACACACACTAAATA+AGG - chr4_4:47891877-47891896 None:intergenic 30.0%
CTAGTTAAAATCAATTCTCG+AGG + chr4_4:47892025-47892044 Msa0684510:intron 30.0%
! GATACAGTTTGAGTTTACAT+TGG - chr4_4:47892663-47892682 None:intergenic 30.0%
TTCATTTGACCGATGAATAT+TGG + chr4_4:47892728-47892747 Msa0684510:CDS 30.0%
! CACGTTTTTCCAATATTCAT+CGG - chr4_4:47892740-47892759 None:intergenic 30.0%
CTAAGTTTAGAAGGAATGAA+GGG - chr4_4:47892775-47892794 None:intergenic 30.0%
! TTGACAGAACTAGACTTTTA+AGG + chr4_4:47892825-47892844 Msa0684510:intron 30.0%
! TGACAGAACTAGACTTTTAA+GGG + chr4_4:47892826-47892845 Msa0684510:intron 30.0%
!!! CGCTTATCATACAAGTTTTT+TGG - chr4_4:47893073-47893092 None:intergenic 30.0%
GACTTATTGAACTGTTTATC+AGG + chr4_4:47893194-47893213 Msa0684510:intron 30.0%
CAAACTACAATTGGTTAGAT+TGG - chr4_4:47893314-47893333 None:intergenic 30.0%
!!! TGTTTTTTTTCCGTTCTGAT+AGG + chr4_4:47893384-47893403 Msa0684510:intron 30.0%
! TGTTTTTCTGACTAATGCAT+AGG - chr4_4:47893718-47893737 None:intergenic 30.0%
! TTACATGCTAGTTTCTAATG+TGG + chr4_4:47893751-47893770 Msa0684510:intron 30.0%
! CTAATGTGGTTTGAAATTTC+AGG + chr4_4:47893765-47893784 Msa0684510:intron 30.0%
! TGGTTTGAAATTTCAGGTAA+AGG + chr4_4:47893771-47893790 Msa0684510:intron 30.0%
TCTACCAAATAAGGATAGAA+AGG + chr4_4:47894071-47894090 Msa0684510:CDS 30.0%
GAATCCTTTCTATCCTTATT+TGG - chr4_4:47894078-47894097 None:intergenic 30.0%
GCCATATATTTGTCAAACAT+TGG - chr4_4:47894163-47894182 None:intergenic 30.0%
! GATCAGAAAATCAAGAGTAT+CGG - chr4_4:47894192-47894211 None:intergenic 30.0%
!!! TGATCAGTTTTGAAAGAGAA+TGG + chr4_4:47894207-47894226 Msa0684510:intron 30.0%
!! GAATTTGTTGCAAGACATAT+TGG + chr4_4:47894413-47894432 Msa0684510:CDS 30.0%
! ATTTGTTGCAAGACATATTG+GGG + chr4_4:47894415-47894434 Msa0684510:CDS 30.0%
TGGAATGTATAAAATGTGAC+AGG - chr4_4:47894610-47894629 None:intergenic 30.0%
GATCTGTCTTCAACATAAAA+TGG - chr4_4:47894630-47894649 None:intergenic 30.0%
!! AATTAGGTTGAGTTAGATAG+AGG + chr4_4:47894711-47894730 Msa0684510:intron 30.0%
TAGATAGAGGAAACGATAAA+AGG + chr4_4:47894724-47894743 Msa0684510:intron 30.0%
! TATAAGTCCTCTTTTCACAA+TGG + chr4_4:47894848-47894867 Msa0684510:intron 30.0%
!!! TTTTGGAAAGTGTTTCAAAC+AGG + chr4_4:47895004-47895023 Msa0684510:intron 30.0%
!! TATGGAAAGTTTGTTAGCTT+AGG + chr4_4:47895306-47895325 Msa0684510:intron 30.0%
!! ATGGAAAGTTTGTTAGCTTA+GGG + chr4_4:47895307-47895326 Msa0684510:intron 30.0%
GCATTCCTATTACTCAAATA+TGG + chr4_4:47895387-47895406 Msa0684510:intron 30.0%
TACCTGCATAAATGACAAAA+GGG - chr4_4:47895433-47895452 None:intergenic 30.0%
ATACCTGCATAAATGACAAA+AGG - chr4_4:47895434-47895453 None:intergenic 30.0%
GTCAAAGGAAAAGTAATTTC+TGG - chr4_4:47895497-47895516 None:intergenic 30.0%
GAAAAACATTTGTGATAGCA+GGG - chr4_4:47895636-47895655 None:intergenic 30.0%
TGAAAAACATTTGTGATAGC+AGG - chr4_4:47895637-47895656 None:intergenic 30.0%
AAATATAAAACGCTAGGTAC+TGG + chr4_4:47896182-47896201 Msa0684510:three_prime_UTR 30.0%
!!! AATAAGTATTTTTTGGAGGG+AGG + chr4_4:47896236-47896255 Msa0684510:three_prime_UTR 30.0%
!!! ATAAGTATTTTTTGGAGGGA+GGG + chr4_4:47896237-47896256 Msa0684510:three_prime_UTR 30.0%
CTACTTTAAATTGCAATGCA+AGG + chr4_4:47896263-47896282 Msa0684510:three_prime_UTR 30.0%
GTTTAGTGTAAAGAGATGTT+AGG + chr4_4:47896380-47896399 Msa0684510:three_prime_UTR 30.0%
TTAGTGTAAAGAGATGTTAG+GGG + chr4_4:47896382-47896401 Msa0684510:three_prime_UTR 30.0%
!!! TATTTTTTACAAGATAGGGG+AGG - chr4_4:47896486-47896505 None:intergenic 30.0%
GTGTTGGGAATTGAAAAAGT+GGG - chr4_4:47886708-47886727 None:intergenic 35.0%
! AGTGTTGGGAATTGAAAAAG+TGG - chr4_4:47886709-47886728 None:intergenic 35.0%
! AGAAAATGATGTGGAGTGTT+GGG - chr4_4:47886723-47886742 None:intergenic 35.0%
!! GGGTGTTGAATGAAAACTAT+TGG - chr4_4:47886782-47886801 None:intergenic 35.0%
! AAATAAAAAGTGGTGGGGTA+GGG - chr4_4:47886802-47886821 None:intergenic 35.0%
AAGCACATATGGACAAAGTT+TGG - chr4_4:47887087-47887106 None:intergenic 35.0%
CAAAATATCAAGAGGGATGT+CGG - chr4_4:47887422-47887441 None:intergenic 35.0%
TTGACGAAAGTTGGATAAGA+AGG + chr4_4:47887483-47887502 Msa0684510:intron 35.0%
TGACGAAAGTTGGATAAGAA+GGG + chr4_4:47887484-47887503 Msa0684510:intron 35.0%
ATGACATACTATCTAGCTGA+TGG - chr4_4:47887516-47887535 None:intergenic 35.0%
!! TTTGATGATGTGGAACAGAA+GGG - chr4_4:47887571-47887590 None:intergenic 35.0%
AACTGCTTCAAGAATAACTG+TGG + chr4_4:47887678-47887697 Msa0684510:intron 35.0%
GGAAAAATTGTCCTAAAGCA+TGG - chr4_4:47887738-47887757 None:intergenic 35.0%
ACTACATGTTAGTGAAATGC+GGG - chr4_4:47887806-47887825 None:intergenic 35.0%
TATTCTTTGCAGGTCATCTT+CGG + chr4_4:47887825-47887844 Msa0684510:intron 35.0%
TGCTTACTTAGATTCTGCAA+AGG - chr4_4:47887892-47887911 None:intergenic 35.0%
AATAGGAAGTAGTACAGCAT+TGG - chr4_4:47887917-47887936 None:intergenic 35.0%
TGGTGATATACCTTCTTTGT+TGG + chr4_4:47888011-47888030 Msa0684510:intron 35.0%
TGATATACCTTCTTTGTTGG+TGG + chr4_4:47888014-47888033 Msa0684510:intron 35.0%
!!! GGAAAACTTGTTTTTGCATC+CGG + chr4_4:47888094-47888113 Msa0684510:intron 35.0%
AACATTGCATCGTCATATGT+AGG + chr4_4:47888129-47888148 Msa0684510:intron 35.0%
AAAAAACTAGAGGAAGGTAG+TGG - chr4_4:47888245-47888264 None:intergenic 35.0%
! ACACTATCAATGGATCCTTT+TGG - chr4_4:47888344-47888363 None:intergenic 35.0%
ATAAGCAAATAGGTGAAGCA+CGG + chr4_4:47888470-47888489 Msa0684510:intron 35.0%
GCATAGTAAAGCAATACCAT+GGG + chr4_4:47888519-47888538 Msa0684510:intron 35.0%
TAAAGCAATACCATGTGTTG+TGG + chr4_4:47888553-47888572 Msa0684510:intron 35.0%
GCATAGTAAAGCAATACCAT+GGG + chr4_4:47888519-47888538 Msa0684510:intron 35.0%
! TTTTGTCAGTGTTACATCCA+TGG - chr4_4:47888637-47888656 None:intergenic 35.0%
AAAACTAGTGAGGAATACCA+TGG + chr4_4:47888713-47888732 Msa0684510:intron 35.0%
AAACTAGTGAGGAATACCAT+GGG + chr4_4:47888714-47888733 Msa0684510:intron 35.0%
! AACTTTAATTTCACAGCCCA+TGG - chr4_4:47888733-47888752 None:intergenic 35.0%
AAAAGCTCTGTTGGAAAACT+TGG - chr4_4:47888925-47888944 None:intergenic 35.0%
!!! CGGTGTACTTTCCATTTTTT+CGG + chr4_4:47889027-47889046 Msa0684510:intron 35.0%
AAAAAGAAAAACAAGGACGC+TGG - chr4_4:47889130-47889149 None:intergenic 35.0%
!! ATTTGGTGTTAATTAGTGGG+TGG - chr4_4:47889603-47889622 None:intergenic 35.0%
! TTTTGTTCAGTGTTCCATGA+TGG + chr4_4:47889622-47889641 Msa0684510:intron 35.0%
TCATCACAAATAAATCGTGG+TGG - chr4_4:47889712-47889731 None:intergenic 35.0%
CGGCATATAACCATTATATG+GGG + chr4_4:47889777-47889796 Msa0684510:intron 35.0%
GGCATATAACCATTATATGG+GGG + chr4_4:47889778-47889797 Msa0684510:intron 35.0%
! ATGAAAGTTGTTTGGAACAG+AGG + chr4_4:47889840-47889859 Msa0684510:intron 35.0%
GGATGAGTGATTGAAATTTG+AGG + chr4_4:47889861-47889880 Msa0684510:intron 35.0%
! CCTCAAAACATGCCTAATTT+TGG - chr4_4:47889892-47889911 None:intergenic 35.0%
! CCAAAATTAGGCATGTTTTG+AGG + chr4_4:47889889-47889908 Msa0684510:intron 35.0%
!!! TATTTGGGTTTTGAGGATGT+TGG + chr4_4:47889929-47889948 Msa0684510:intron 35.0%
!!! GGAAATTGATTTGGGTTTTG+AGG + chr4_4:47889955-47889974 Msa0684510:intron 35.0%
! TGTTGGTTGGGAAATTGATT+TGG + chr4_4:47889979-47889998 Msa0684510:intron 35.0%
! GTTGGTTGGGAAATTGATTT+GGG + chr4_4:47889980-47889999 Msa0684510:intron 35.0%
!! TTGGGATTTTGGTAGTTAAG+TGG + chr4_4:47890015-47890034 Msa0684510:intron 35.0%
!! TGGGATTTTGGTAGTTAAGT+GGG + chr4_4:47890016-47890035 Msa0684510:intron 35.0%
! GTGGGTAATCAGAAGAATTT+TGG + chr4_4:47890034-47890053 Msa0684510:intron 35.0%
GAGACTTGGATCATTTGATT+TGG - chr4_4:47890171-47890190 None:intergenic 35.0%
!! GAAAGACTTTTGGTTGGATA+AGG - chr4_4:47890319-47890338 None:intergenic 35.0%
CGCTTTGATTGTGAGAAAAT+TGG - chr4_4:47890396-47890415 None:intergenic 35.0%
! AACAAGTTGAATTCTGCACA+CGG - chr4_4:47890432-47890451 None:intergenic 35.0%
CAATTCTCCAATGGTTCAAT+AGG + chr4_4:47890495-47890514 Msa0684510:intron 35.0%
GTCTAGAAAAACTTTACGAG+AGG + chr4_4:47890660-47890679 Msa0684510:intron 35.0%
AAAACTGCAAGTCAAATGTG+GGG - chr4_4:47891009-47891028 None:intergenic 35.0%
GAAAACTGCAAGTCAAATGT+GGG - chr4_4:47891010-47891029 None:intergenic 35.0%
TGAAAACTGCAAGTCAAATG+TGG - chr4_4:47891011-47891030 None:intergenic 35.0%
AACGTTAACACATCCAAGTA+GGG - chr4_4:47891044-47891063 None:intergenic 35.0%
ATTGCCAGATAAACGATTTG+GGG - chr4_4:47891104-47891123 None:intergenic 35.0%
CAGAAAGTTTGATGCTAAAC+AGG + chr4_4:47891265-47891284 Msa0684510:intron 35.0%
AACGCGAAAGATGTTGAAAA+TGG + chr4_4:47891335-47891354 Msa0684510:exon 35.0%
!!! GGAGATTAGGGTTTATTTTG+CGG - chr4_4:47891425-47891444 None:intergenic 35.0%
!! ATCGGAACAGAATAGTTTTG+AGG - chr4_4:47891457-47891476 None:intergenic 35.0%
AGGTGATGTTTGAAGAGAAT+CGG - chr4_4:47891475-47891494 None:intergenic 35.0%
CTGCTTTCTACCTTAAGATA+TGG + chr4_4:47891640-47891659 Msa0684510:CDS 35.0%
TACTTCAAATCATCTTCCCA+AGG - chr4_4:47891819-47891838 None:intergenic 35.0%
! ATGAGTTGAATGTGAAATCC+CGG + chr4_4:47891957-47891976 Msa0684510:intron 35.0%
AGAGATATTCCTTCTCGAAT+TGG - chr4_4:47892133-47892152 None:intergenic 35.0%
ATACTATCACAATTCTACGG+TGG + chr4_4:47892371-47892390 Msa0684510:intron 35.0%
CGACTAAAAATCAATGCTAC+AGG - chr4_4:47892469-47892488 None:intergenic 35.0%
! TTAGGAGTGTGTCTGATTAT+GGG - chr4_4:47892622-47892641 None:intergenic 35.0%
! ATTAGGAGTGTGTCTGATTA+TGG - chr4_4:47892623-47892642 None:intergenic 35.0%
TAATGTGATAGCATCGCATT+AGG - chr4_4:47892640-47892659 None:intergenic 35.0%
GTCAAATGAACAACTTCTAG+TGG - chr4_4:47892718-47892737 None:intergenic 35.0%
CGATGAATATTGGAAAAACG+TGG + chr4_4:47892738-47892757 Msa0684510:CDS 35.0%
GCTAAGTTTAGAAGGAATGA+AGG - chr4_4:47892776-47892795 None:intergenic 35.0%
! TGTTACTGGCTAAGTTTAGA+AGG - chr4_4:47892784-47892803 None:intergenic 35.0%
CCTATACTCTTCAATGATGT+AGG - chr4_4:47893223-47893242 None:intergenic 35.0%
! CCTACATCATTGAAGAGTAT+AGG + chr4_4:47893220-47893239 Msa0684510:CDS 35.0%
! ATCATTGAAGAGTATAGGTG+TGG + chr4_4:47893225-47893244 Msa0684510:CDS 35.0%
CTTGTATTGCATAGAACATC+CGG - chr4_4:47893264-47893283 None:intergenic 35.0%
CAAAAATGCACCTATCAGAA+CGG - chr4_4:47893397-47893416 None:intergenic 35.0%
! TCTAGAACTATCACAAGACA+CGG + chr4_4:47893512-47893531 Msa0684510:CDS 35.0%
! ACACGGTAGATATACTTTTG+TGG + chr4_4:47893529-47893548 Msa0684510:intron 35.0%
! CAAGATCTTGTTTGCATTTG+TGG + chr4_4:47893555-47893574 Msa0684510:intron 35.0%
! TGTTTGCATTTGTGGTTTGT+AGG + chr4_4:47893563-47893582 Msa0684510:intron 35.0%
TTTCTGTACTTCCATATCCT+TGG + chr4_4:47893591-47893610 Msa0684510:intron 35.0%
TGAAAACTCTTCCAAGGATA+TGG - chr4_4:47893605-47893624 None:intergenic 35.0%
AATCAGTGAAAACTCTTCCA+AGG - chr4_4:47893611-47893630 None:intergenic 35.0%
AACTAGTCACAACAAACCTT+AGG - chr4_4:47893868-47893887 None:intergenic 35.0%
TTATGTCAGAGTGAGAATTC+TGG + chr4_4:47893940-47893959 Msa0684510:intron 35.0%
!!! GGCTTCTGGTTTTATACTAT+TGG + chr4_4:47894494-47894513 Msa0684510:CDS 35.0%
ATGCAAGAAAGAAACAGAGA+GGG - chr4_4:47894563-47894582 None:intergenic 35.0%
AATGCAAGAAAGAAACAGAG+AGG - chr4_4:47894564-47894583 None:intergenic 35.0%
AGGATAACCATTGTGAAAAG+AGG - chr4_4:47894858-47894877 None:intergenic 35.0%
! AGCGGGTTTCTTATGATAAA+AGG + chr4_4:47895033-47895052 Msa0684510:intron 35.0%
TACTTTAACATGTGCCCTTA+GGG - chr4_4:47895198-47895217 None:intergenic 35.0%
ACGGTCCATATTTGAGTAAT+AGG - chr4_4:47895395-47895414 None:intergenic 35.0%
!! ATCCCTTTTGTCATTTATGC+AGG + chr4_4:47895428-47895447 Msa0684510:intron 35.0%
!!! TATGCGCCTTTTTTTGTCAA+AGG - chr4_4:47895512-47895531 None:intergenic 35.0%
! GGTCTTTTAAATGGCTTAGT+GGG + chr4_4:47895542-47895561 Msa0684510:CDS 35.0%
! TCCAGTATCTTAACCTTTTC+AGG + chr4_4:47895676-47895695 Msa0684510:intron 35.0%
ACCTGAAAAGGTTAAGATAC+TGG - chr4_4:47895680-47895699 None:intergenic 35.0%
TAAGCTACAATCGTAGAACA+CGG - chr4_4:47895714-47895733 None:intergenic 35.0%
CTACGATTGTAGCTTAGAAA+TGG + chr4_4:47895718-47895737 Msa0684510:CDS 35.0%
TGTAGCTTAGAAATGGAACT+TGG + chr4_4:47895725-47895744 Msa0684510:CDS 35.0%
CTTGATCATCTTCAGATATG+CGG - chr4_4:47895781-47895800 None:intergenic 35.0%
!!! CATTGGTTCTGGTGTAATTT+TGG + chr4_4:47895847-47895866 Msa0684510:CDS 35.0%
! ATTGGCAAGTAAAGCATCAT+AGG + chr4_4:47896009-47896028 Msa0684510:CDS 35.0%
! TTGGCAAGTAAAGCATCATA+GGG + chr4_4:47896010-47896029 Msa0684510:CDS 35.0%
AAATTGCAATGCAAGGTTGT+AGG + chr4_4:47896270-47896289 Msa0684510:three_prime_UTR 35.0%
AATTGCAATGCAAGGTTGTA+GGG + chr4_4:47896271-47896290 Msa0684510:three_prime_UTR 35.0%
!!! CTCTGCACATGTTTTTAGAA+GGG + chr4_4:47896297-47896316 Msa0684510:three_prime_UTR 35.0%
!!! TCTGCACATGTTTTTAGAAG+GGG + chr4_4:47896298-47896317 Msa0684510:three_prime_UTR 35.0%
!!! CATGTTTTTAGAAGGGGAAA+TGG + chr4_4:47896304-47896323 Msa0684510:three_prime_UTR 35.0%
! TTATTTTCCCCCCCATAAAT+AGG + chr4_4:47896455-47896474 Msa0684510:three_prime_UTR 35.0%
AGCAATACCTCTAATCTCGT+GGG + chr4_4:47886614-47886633 Msa0684510:intron 40.0%
TCCACTTTAGACCAATGTAG+TGG + chr4_4:47886637-47886656 Msa0684510:intron 40.0%
! ACCACTACATTGGTCTAAAG+TGG - chr4_4:47886641-47886660 None:intergenic 40.0%
CATATGACACACCACTACAT+TGG - chr4_4:47886651-47886670 None:intergenic 40.0%
!! ATTGAAAAAGTGGGTGTCGA+AGG - chr4_4:47886699-47886718 None:intergenic 40.0%
GAGAAAATGATGTGGAGTGT+TGG - chr4_4:47886724-47886743 None:intergenic 40.0%
! GAAATAAAAAGTGGTGGGGT+AGG - chr4_4:47886803-47886822 None:intergenic 40.0%
CAGATCTAGTGAAGCACATA+TGG - chr4_4:47887098-47887117 None:intergenic 40.0%
AACATTTGGATCACGCAACT+CGG + chr4_4:47887134-47887153 Msa0684510:intron 40.0%
! ACGCACATGATTTGCAAAAG+TGG + chr4_4:47887164-47887183 Msa0684510:intron 40.0%
! CGCACATGATTTGCAAAAGT+GGG + chr4_4:47887165-47887184 Msa0684510:intron 40.0%
! AGCGATTTTGAGCAATCTGA+GGG - chr4_4:47887234-47887253 None:intergenic 40.0%
GAGATACATATGCTCAACGT+TGG - chr4_4:47887257-47887276 None:intergenic 40.0%
CCTCATGATGATACCCAAAT+CGG + chr4_4:47887317-47887336 Msa0684510:intron 40.0%
! AAGGACATCAAACGTGCTTT+TGG - chr4_4:47887399-47887418 None:intergenic 40.0%
AACTTATCGGGTTCACTTTG+AGG + chr4_4:47887447-47887466 Msa0684510:intron 40.0%
!! GTTTGATGATGTGGAACAGA+AGG - chr4_4:47887572-47887591 None:intergenic 40.0%
TGTTCCACATCATCAAACAC+TGG + chr4_4:47887574-47887593 Msa0684510:intron 40.0%
CATCTCATGATCTATGGATC+TGG - chr4_4:47887657-47887676 None:intergenic 40.0%
CAGTTGCATCTCATGATCTA+TGG - chr4_4:47887663-47887682 None:intergenic 40.0%
TGCTTCAAGAATAACTGTGG+TGG + chr4_4:47887681-47887700 Msa0684510:intron 40.0%
AATTGACCTTCCCATGCTTT+AGG + chr4_4:47887724-47887743 Msa0684510:intron 40.0%
AATTGTCCTAAAGCATGGGA+AGG - chr4_4:47887733-47887752 None:intergenic 40.0%
!! GAGTATTGACTGTATGCACT+GGG - chr4_4:47887764-47887783 None:intergenic 40.0%
TACATGTTAGTGAAATGCGG+GGG - chr4_4:47887804-47887823 None:intergenic 40.0%
CTACATGTTAGTGAAATGCG+GGG - chr4_4:47887805-47887824 None:intergenic 40.0%
GCAATGCGAATGTTAGCATA+TGG - chr4_4:47887973-47887992 None:intergenic 40.0%
! GCTGTGGTACATTTTGCTAA+TGG + chr4_4:47887991-47888010 Msa0684510:intron 40.0%
! CAAGTTTTCCTTCGAATCGT+TGG - chr4_4:47888084-47888103 None:intergenic 40.0%
ATCGTCATATGTAGGCTCAT+TGG + chr4_4:47888137-47888156 Msa0684510:intron 40.0%
AGTAGTCGTCAATGAGTCTT+TGG + chr4_4:47888163-47888182 Msa0684510:intron 40.0%
CGTCGAAAAAAACTAGAGGA+AGG - chr4_4:47888251-47888270 None:intergenic 40.0%
! TCAGCGTCGAAAAAAACTAG+AGG - chr4_4:47888255-47888274 None:intergenic 40.0%
!! AGCATCACGTTTTTCGAAGT+AGG + chr4_4:47888304-47888323 Msa0684510:intron 40.0%
TAAGCAAATAGGTGAAGCAC+GGG + chr4_4:47888471-47888490 Msa0684510:intron 40.0%
GGCATAGTAAAGCAATACCA+TGG + chr4_4:47888518-47888537 Msa0684510:intron 40.0%
CTTTACTATGCCACAACACA+TGG - chr4_4:47888566-47888585 None:intergenic 40.0%
GGCATAGTAAAGCAATACCA+TGG + chr4_4:47888518-47888537 Msa0684510:intron 40.0%
!!! ACTAGTTTTTTCACAGCCCA+TGG - chr4_4:47888702-47888721 None:intergenic 40.0%
TGACAGGAAAAAAGCTCTGT+TGG - chr4_4:47888934-47888953 None:intergenic 40.0%
! GTTTTTCTCTTGTTGCACTG+CGG + chr4_4:47889007-47889026 Msa0684510:intron 40.0%
TGGATCTAAGAGATCTAACG+AGG - chr4_4:47889209-47889228 None:intergenic 40.0%
TCCCACATGCATATATTTCC+TGG + chr4_4:47889341-47889360 Msa0684510:intron 40.0%
CCCAGGAAATATATGCATGT+GGG - chr4_4:47889345-47889364 None:intergenic 40.0%
CCCACATGCATATATTTCCT+GGG + chr4_4:47889342-47889361 Msa0684510:intron 40.0%
CAGACAAGTGAAGCATATTG+GGG - chr4_4:47889544-47889563 None:intergenic 40.0%
CCAGACAAGTGAAGCATATT+GGG - chr4_4:47889545-47889564 None:intergenic 40.0%
ACCAGACAAGTGAAGCATAT+TGG - chr4_4:47889546-47889565 None:intergenic 40.0%
TATGGAACATCCAGTGTTGT+CGG - chr4_4:47889574-47889593 None:intergenic 40.0%
ATCTAATGAAGTCACTCCAG+AGG - chr4_4:47889680-47889699 None:intergenic 40.0%
TCTCAAACACCCCCATATAA+TGG - chr4_4:47889790-47889809 None:intergenic 40.0%
!! TTATATGGGGGTGTTTGAGA+TGG + chr4_4:47889790-47889809 Msa0684510:intron 40.0%
!!! TAGGCATGTTTTGAGGAGTT+TGG + chr4_4:47889896-47889915 Msa0684510:intron 40.0%
!!! GATTTGGGTTTTGAGGATGT+TGG + chr4_4:47889962-47889981 Msa0684510:intron 40.0%
! GAGAGAGAAAGACTTTTGGT+TGG - chr4_4:47890325-47890344 None:intergenic 40.0%
! ACAAGTTGAATTCTGCACAC+GGG - chr4_4:47890431-47890450 None:intergenic 40.0%
! ATTGCTTGTTGAGAGTGACA+TGG - chr4_4:47890479-47890498 None:intergenic 40.0%
CTCAACAAGCAATTCTCCAA+TGG + chr4_4:47890486-47890505 Msa0684510:intron 40.0%
TAGGCATTCAATAACCCCAT+TGG + chr4_4:47890524-47890543 Msa0684510:intron 40.0%
AGGCATTCAATAACCCCATT+GGG + chr4_4:47890525-47890544 Msa0684510:intron 40.0%
TTTAAGCCACAGAACCGTAA+GGG - chr4_4:47890797-47890816 None:intergenic 40.0%
! TTTTAAGCCACAGAACCGTA+AGG - chr4_4:47890798-47890817 None:intergenic 40.0%
! GTCAAGACTAATCGTCGTTT+TGG - chr4_4:47890932-47890951 None:intergenic 40.0%
TCTTGACCAATCATTTACGC+CGG + chr4_4:47890945-47890964 Msa0684510:intron 40.0%
ACATTACCGGCGTAAATGAT+TGG - chr4_4:47890954-47890973 None:intergenic 40.0%
CGAAAAGACTTGCACATTAC+CGG - chr4_4:47890967-47890986 None:intergenic 40.0%
! CGGTAATGTGCAAGTCTTTT+CGG + chr4_4:47890965-47890984 Msa0684510:intron 40.0%
ACGTTAACACATCCAAGTAG+GGG - chr4_4:47891043-47891062 None:intergenic 40.0%
GAACGTTAACACATCCAAGT+AGG - chr4_4:47891045-47891064 None:intergenic 40.0%
!! AATTTCCCTCGGTTGATAGT+AGG - chr4_4:47891074-47891093 None:intergenic 40.0%
CTATCCCCAAATCGTTTATC+TGG + chr4_4:47891097-47891116 Msa0684510:intron 40.0%
TTGATGCTAAACAGGGACTA+AGG + chr4_4:47891273-47891292 Msa0684510:five_prime_UTR 40.0%
TGATGCTAAACAGGGACTAA+GGG + chr4_4:47891274-47891293 Msa0684510:five_prime_UTR 40.0%
CGTTGATGTTCATCCGTTTA+CGG - chr4_4:47891319-47891338 None:intergenic 40.0%
!!! GGTTTATTTTGCGGAGGTTT+TGG - chr4_4:47891416-47891435 None:intergenic 40.0%
!!! GATTAGGGTTTATTTTGCGG+AGG - chr4_4:47891422-47891441 None:intergenic 40.0%
!!! ATAGTTTTGAGGTGGTGAAG+CGG - chr4_4:47891446-47891465 None:intergenic 40.0%
!!! GGAACAGAATAGTTTTGAGG+TGG - chr4_4:47891454-47891473 None:intergenic 40.0%
TGCTAGAGATGTTTGCAATC+AGG + chr4_4:47891839-47891858 Msa0684510:CDS 40.0%
! TAGGAGTGTGTCTGATTATG+GGG - chr4_4:47892621-47892640 None:intergenic 40.0%
GCAATTTCGCTGTTGAGTAT+TGG + chr4_4:47893147-47893166 Msa0684510:intron 40.0%
AATATGAGACAGAGCTGCAA+TGG - chr4_4:47893173-47893192 None:intergenic 40.0%
TTGCATAGAACATCCGGATT+CGG - chr4_4:47893258-47893277 None:intergenic 40.0%
! CGTTCTGATAGGTGCATTTT+TGG + chr4_4:47893395-47893414 Msa0684510:intron 40.0%
!! GGTGCATTTTTGGATGCAAT+CGG + chr4_4:47893405-47893424 Msa0684510:intron 40.0%
!!! GTTTTGACTATGTTGCCTCT+GGG + chr4_4:47893436-47893455 Msa0684510:CDS 40.0%
CATCCATCTCATCTGCAAAT+GGG - chr4_4:47893482-47893501 None:intergenic 40.0%
CATTTGCAGATGAGATGGAT+GGG + chr4_4:47893481-47893500 Msa0684510:CDS 40.0%
!! TGTGATAGTTCTAGAGCAGA+AGG - chr4_4:47893507-47893526 None:intergenic 40.0%
AAAAAGAAGTCGCTTCAGCT+GGG - chr4_4:47893830-47893849 None:intergenic 40.0%
! AAGCGACTTCTTTTTCCACT+TGG + chr4_4:47893835-47893854 Msa0684510:CDS 40.0%
!! TCCACTTGGTTCTATTCCTA+AGG + chr4_4:47893849-47893868 Msa0684510:CDS 40.0%
ACCTTAGGAATAGAACCAAG+TGG - chr4_4:47893853-47893872 None:intergenic 40.0%
TAAGGATAGAAAGGATTCCC+AGG + chr4_4:47894080-47894099 Msa0684510:CDS 40.0%
AAGGATAGAAAGGATTCCCA+GGG + chr4_4:47894081-47894100 Msa0684510:CDS 40.0%
! TTCCCAGGGAATATGCTTTT+TGG + chr4_4:47894095-47894114 Msa0684510:CDS 40.0%
!! TCCCAGGGAATATGCTTTTT+GGG + chr4_4:47894096-47894115 Msa0684510:CDS 40.0%
AGACATATTGGGGAGAAAGA+AGG + chr4_4:47894425-47894444 Msa0684510:CDS 40.0%
GAGATTTCCTTGGCAAACAT+CGG + chr4_4:47894471-47894490 Msa0684510:CDS 40.0%
AGATTTCCTTGGCAAACATC+GGG + chr4_4:47894472-47894491 Msa0684510:CDS 40.0%
TTATACTATTGGTCAACGCC+AGG + chr4_4:47894505-47894524 Msa0684510:CDS 40.0%
TATACTATTGGTCAACGCCA+GGG + chr4_4:47894506-47894525 Msa0684510:CDS 40.0%
TGCAAGAAAGAAACAGAGAG+GGG - chr4_4:47894562-47894581 None:intergenic 40.0%
AAATGCTAACATGTGCCCTA+AGG + chr4_4:47895180-47895199 Msa0684510:intron 40.0%
AATGCTAACATGTGCCCTAA+GGG + chr4_4:47895181-47895200 Msa0684510:intron 40.0%
GTACTTTAACATGTGCCCTT+AGG - chr4_4:47895199-47895218 None:intergenic 40.0%
ATGCAGGTATGTTGTTGAGA+AGG + chr4_4:47895444-47895463 Msa0684510:intron 40.0%
! TCCGTGTTGGGTCTTTTAAA+TGG + chr4_4:47895533-47895552 Msa0684510:CDS 40.0%
GCCATTTAAAAGACCCAACA+CGG - chr4_4:47895537-47895556 None:intergenic 40.0%
! GGGTCTTTTAAATGGCTTAG+TGG + chr4_4:47895541-47895560 Msa0684510:CDS 40.0%
!!! TAACCTTTTCAGGTGAGACA+TGG + chr4_4:47895686-47895705 Msa0684510:intron 40.0%
AAGCTACAATCGTAGAACAC+GGG - chr4_4:47895713-47895732 None:intergenic 40.0%
CGCATATCTGAAGATGATCA+AGG + chr4_4:47895779-47895798 Msa0684510:CDS 40.0%
TATGAGGGAAGAACATGCAT+TGG + chr4_4:47895830-47895849 Msa0684510:CDS 40.0%
!!! TCTGGTGTAATTTTGGAGTC+CGG + chr4_4:47895854-47895873 Msa0684510:CDS 40.0%
TGGAAAACTTTGATCATCCC+CGG - chr4_4:47895876-47895895 None:intergenic 40.0%
!! AGCTTTGGAAATTGCACGAA+TGG + chr4_4:47895907-47895926 Msa0684510:CDS 40.0%
TGCTTTACTTGCCAATTCTG+CGG - chr4_4:47896005-47896024 None:intergenic 40.0%
! TTTTCGGATGCCGGATAAAA+GGG - chr4_4:47896108-47896127 None:intergenic 40.0%
! ATTTTCGGATGCCGGATAAA+AGG - chr4_4:47896109-47896128 None:intergenic 40.0%
TTTATCCGGCATCCGAAAAT+TGG + chr4_4:47896109-47896128 Msa0684510:three_prime_UTR 40.0%
TAAATGTTCCCACGCCTTAA+GGG - chr4_4:47896211-47896230 None:intergenic 40.0%
ATAAATGTTCCCACGCCTTA+AGG - chr4_4:47896212-47896231 None:intergenic 40.0%
! CCTTCTAAAAACATGTGCAG+AGG - chr4_4:47896299-47896318 None:intergenic 40.0%
!!! CCTCTGCACATGTTTTTAGA+AGG + chr4_4:47896296-47896315 Msa0684510:three_prime_UTR 40.0%
AGATGTTAGGGGAAAGATCA+AGG + chr4_4:47896393-47896412 Msa0684510:three_prime_UTR 40.0%
AGGCAAAACCTATTTATGGG+GGG - chr4_4:47896466-47896485 None:intergenic 40.0%
GAGGCAAAACCTATTTATGG+GGG - chr4_4:47896467-47896486 None:intergenic 40.0%
GGAGGCAAAACCTATTTATG+GGG - chr4_4:47896468-47896487 None:intergenic 40.0%
GGGAGGCAAAACCTATTTAT+GGG - chr4_4:47896469-47896488 None:intergenic 40.0%
GCGCAACGAGAAGAAAAAAG+AGG + chr4_4:47886547-47886566 Msa0684510:five_prime_UTR 45.0%
CAGCAATACCTCTAATCTCG+TGG + chr4_4:47886613-47886632 Msa0684510:intron 45.0%
GTGGTGTGTCATATGTCCAA+TGG + chr4_4:47886656-47886675 Msa0684510:intron 45.0%
AAATGTTCACCACGCATTGC+AGG - chr4_4:47887121-47887140 None:intergenic 45.0%
TGCAATGCGTGGTGAACATT+TGG + chr4_4:47887120-47887139 Msa0684510:intron 45.0%
TTTGAGCAATCTGAGGGAAG+TGG - chr4_4:47887228-47887247 None:intergenic 45.0%
! GAGCGATTTTGAGCAATCTG+AGG - chr4_4:47887235-47887254 None:intergenic 45.0%
!! CCGATTTGGGTATCATCATG+AGG - chr4_4:47887320-47887339 None:intergenic 45.0%
! TTGTGGGACATAGCCGATTT+GGG - chr4_4:47887333-47887352 None:intergenic 45.0%
ATATCAAGAGGGATGTCGGA+AGG - chr4_4:47887418-47887437 None:intergenic 45.0%
!! GTCACCAGTGTTTGATGATG+TGG - chr4_4:47887581-47887600 None:intergenic 45.0%
!!! CATGCCTTTTTTGGATGTCC+GGG - chr4_4:47887634-47887653 None:intergenic 45.0%
!!! GCATGCCTTTTTTGGATGTC+CGG - chr4_4:47887635-47887654 None:intergenic 45.0%
!!! TGGATCTGGCATGCCTTTTT+TGG - chr4_4:47887643-47887662 None:intergenic 45.0%
ATGGGAAGGTCAATTCACCA+GGG - chr4_4:47887719-47887738 None:intergenic 45.0%
!! GGAGTATTGACTGTATGCAC+TGG - chr4_4:47887765-47887784 None:intergenic 45.0%
TCAATACTCCTGATCATCCC+TGG + chr4_4:47887775-47887794 Msa0684510:intron 45.0%
CAATACTCCTGATCATCCCT+GGG + chr4_4:47887776-47887795 Msa0684510:intron 45.0%
GCGAATGTTAGCATATGGTG+TGG - chr4_4:47887968-47887987 None:intergenic 45.0%
TGCTAACATTCGCATTGCTG+TGG + chr4_4:47887975-47887994 Msa0684510:intron 45.0%
GTTGATGCCACCAACAAAGA+AGG - chr4_4:47888024-47888043 None:intergenic 45.0%
AAAGGTCTCCAACGATTCGA+AGG + chr4_4:47888073-47888092 Msa0684510:intron 45.0%
ACGATGCAATGTTTCGTCGT+CGG - chr4_4:47888122-47888141 None:intergenic 45.0%
AAGCAAATAGGTGAAGCACG+GGG + chr4_4:47888472-47888491 Msa0684510:intron 45.0%
! TGAAGCAATACCATGGGTTG+TGG + chr4_4:47888497-47888516 Msa0684510:intron 45.0%
CTTTACTATGCCACAACCCA+TGG - chr4_4:47888510-47888529 None:intergenic 45.0%
! TAAAGCAATACCATGGGCTG+TGG + chr4_4:47888525-47888544 Msa0684510:intron 45.0%
! TAAAGCAATACCATGGGCTG+TGG + chr4_4:47888525-47888544 Msa0684510:intron 45.0%
GGGCTGTGAAAAAACTAGTG+AGG + chr4_4:47888703-47888722 Msa0684510:intron 45.0%
AACTTGGAGCATGAGCTGTT+CGG - chr4_4:47888909-47888928 None:intergenic 45.0%
TCCTGTCATTGAGATGCTCT+TGG + chr4_4:47888946-47888965 Msa0684510:intron 45.0%
CCTGTCATTGAGATGCTCTT+GGG + chr4_4:47888947-47888966 Msa0684510:intron 45.0%
AGATCTAACGAGGACTCTGT+AGG - chr4_4:47889199-47889218 None:intergenic 45.0%
!! AATGTTGGCTCAGGAAGTAG+TGG - chr4_4:47889229-47889248 None:intergenic 45.0%
AGTCAAGTGGGAGGAAATGT+TGG - chr4_4:47889244-47889263 None:intergenic 45.0%
GCCCAGGAAATATATGCATG+TGG - chr4_4:47889346-47889365 None:intergenic 45.0%
! TGATGTGTTGACAAAAGCCC+AGG - chr4_4:47889362-47889381 None:intergenic 45.0%
GTGGAGAATCGAATGAGCAA+TGG + chr4_4:47889494-47889513 Msa0684510:intron 45.0%
CCCAATATGCTTCACTTGTC+TGG + chr4_4:47889542-47889561 Msa0684510:intron 45.0%
ATGGAACATCCAGTGTTGTC+GGG - chr4_4:47889573-47889592 None:intergenic 45.0%
AGAGAAACCAGCAACCATCA+TGG - chr4_4:47889639-47889658 None:intergenic 45.0%
!! TGCTGGTTTCTCTTGCTCTT+AGG + chr4_4:47889646-47889665 Msa0684510:intron 45.0%
CTCTTAGGAGTTGTATCCTC+TGG + chr4_4:47889661-47889680 Msa0684510:intron 45.0%
!!! GGGTTTTGAGGATGTTGGTT+TGG + chr4_4:47889934-47889953 Msa0684510:intron 45.0%
!!! TGGGTTTTGAGGATGTTGGT+TGG + chr4_4:47889933-47889952 Msa0684510:intron 45.0%
!!! GGGTTTTGAGGATGTTGGTT+GGG + chr4_4:47889934-47889953 Msa0684510:intron 45.0%
TTGGTTGGATAAGGAACAGC+TGG - chr4_4:47890310-47890329 None:intergenic 45.0%
! GTCGGAGAGAGAAAGACTTT+TGG - chr4_4:47890329-47890348 None:intergenic 45.0%
GGCATTCAATAACCCCATTG+GGG + chr4_4:47890526-47890545 Msa0684510:intron 45.0%
TTCAATAACCCCATTGGGGA+TGG + chr4_4:47890530-47890549 Msa0684510:intron 45.0%
AATGAACCCTTACGGTTCTG+TGG + chr4_4:47890788-47890807 Msa0684510:intron 45.0%
!! TGCAAGTCTTTTCGGTGTGA+GGG + chr4_4:47890973-47890992 Msa0684510:intron 45.0%
! AAGTCAAATGTGGGGTGTCA+TGG - chr4_4:47891001-47891020 None:intergenic 45.0%
TCACTTAGCTAACCCCTACT+TGG + chr4_4:47891028-47891047 Msa0684510:intron 45.0%
ACCTAACCTACTATCAACCG+AGG + chr4_4:47891065-47891084 Msa0684510:intron 45.0%
CCTAACCTACTATCAACCGA+GGG + chr4_4:47891066-47891085 Msa0684510:intron 45.0%
GATGCTAAACAGGGACTAAG+GGG + chr4_4:47891275-47891294 Msa0684510:five_prime_UTR 45.0%
ATGCTAAACAGGGACTAAGG+GGG + chr4_4:47891276-47891295 Msa0684510:five_prime_UTR 45.0%
GCTTGTGTTCCAACCGTAAA+CGG + chr4_4:47891303-47891322 Msa0684510:five_prime_UTR 45.0%
GATGTTCATCCGTTTACGGT+TGG - chr4_4:47891315-47891334 None:intergenic 45.0%
AGATGTTGAAAATGGCAGCG+CGG + chr4_4:47891343-47891362 Msa0684510:exon 45.0%
GATAGAGAGAGAGAACAGAG+TGG - chr4_4:47891381-47891400 None:intergenic 45.0%
CACTGATAAGAACAGCGACT+CGG - chr4_4:47891563-47891582 None:intergenic 45.0%
GAAAGCAGTGCAAGAATGAC+CGG - chr4_4:47891628-47891647 None:intergenic 45.0%
! ACTTTTGGACGGAATGTCCT+TGG + chr4_4:47891799-47891818 Msa0684510:CDS 45.0%
! CTTTTGGACGGAATGTCCTT+GGG + chr4_4:47891800-47891819 Msa0684510:CDS 45.0%
CTATCACAATTCTACGGTGG+AGG + chr4_4:47892374-47892393 Msa0684510:intron 45.0%
!! GCATTTTTGGATGCAATCGG+TGG + chr4_4:47893408-47893427 Msa0684510:CDS 45.0%
TTTGGATGCAATCGGTGGTA+TGG + chr4_4:47893413-47893432 Msa0684510:CDS 45.0%
TTGGATGCAATCGGTGGTAT+GGG + chr4_4:47893414-47893433 Msa0684510:CDS 45.0%
!!! GGTTTTGACTATGTTGCCTC+TGG + chr4_4:47893435-47893454 Msa0684510:CDS 45.0%
CCATCCATCTCATCTGCAAA+TGG - chr4_4:47893483-47893502 None:intergenic 45.0%
CCATTTGCAGATGAGATGGA+TGG + chr4_4:47893480-47893499 Msa0684510:CDS 45.0%
GAAAAAGAAGTCGCTTCAGC+TGG - chr4_4:47893831-47893850 None:intergenic 45.0%
AGATGGTGTAGAAGGAGACA+GGG - chr4_4:47894015-47894034 None:intergenic 45.0%
! GCCCAAAAAGCATATTCCCT+GGG - chr4_4:47894100-47894119 None:intergenic 45.0%
! TGCCCAAAAAGCATATTCCC+TGG - chr4_4:47894101-47894120 None:intergenic 45.0%
!! GGGAATATGCTTTTTGGGCA+AGG + chr4_4:47894101-47894120 Msa0684510:CDS 45.0%
!! GGAGAAAGAAGGCATCATAC+TGG + chr4_4:47894436-47894455 Msa0684510:CDS 45.0%
ATCATACTGGAAGCTGAGAC+TGG + chr4_4:47894449-47894468 Msa0684510:CDS 45.0%
GATTTCCTTGGCAAACATCG+GGG + chr4_4:47894473-47894492 Msa0684510:CDS 45.0%
ACAGATCTATCACGACAGTG+TGG - chr4_4:47894652-47894671 None:intergenic 45.0%
! AAAAGGCGCATATTCCGTGT+TGG + chr4_4:47895520-47895539 Msa0684510:CDS 45.0%
! AAAGGCGCATATTCCGTGTT+GGG + chr4_4:47895521-47895540 Msa0684510:CDS 45.0%
CAGTTCACAGCCTTCTATGA+GGG + chr4_4:47895815-47895834 Msa0684510:CDS 45.0%
GCATGTTCTTCCCTCATAGA+AGG - chr4_4:47895828-47895847 None:intergenic 45.0%
!! GGAAGAACATGCATTGGTTC+TGG + chr4_4:47895836-47895855 Msa0684510:CDS 45.0%
!!! CTGGTGTAATTTTGGAGTCC+GGG + chr4_4:47895855-47895874 Msa0684510:CDS 45.0%
!!! TGGTGTAATTTTGGAGTCCG+GGG + chr4_4:47895856-47895875 Msa0684510:CDS 45.0%
TCCAGTATGCGCAAAAGCTT+TGG + chr4_4:47895892-47895911 Msa0684510:CDS 45.0%
! TCCAAAGCTTTTGCGCATAC+TGG - chr4_4:47895896-47895915 None:intergenic 45.0%
CACACTTCTTGCAGGTTATC+TGG - chr4_4:47895977-47895996 None:intergenic 45.0%
AGTGTGTGATTCCGCAGAAT+TGG + chr4_4:47895991-47896010 Msa0684510:CDS 45.0%
! AGTCTGCACGTTTGATTTCG+TGG - chr4_4:47896059-47896078 None:intergenic 45.0%
! TGCACATGCCTGCCAATTTT+CGG - chr4_4:47896124-47896143 None:intergenic 45.0%
!! CATTCTCTGACTTGCTGTAG+AGG - chr4_4:47896332-47896351 None:intergenic 45.0%
CTACAGCAAGTCAGAGAATG+AGG + chr4_4:47896332-47896351 Msa0684510:three_prime_UTR 45.0%
GGCAAAACCTATTTATGGGG+GGG - chr4_4:47896465-47896484 None:intergenic 45.0%
GGGGAGGCAAAACCTATTTA+TGG - chr4_4:47896470-47896489 None:intergenic 45.0%
!!! ATATGATTTTTTTTTTTTTT+TGG - chr4_4:47893684-47893703 None:intergenic 5.0%
!!! TTTGATTTTTTTTTTTTTTT+TGG + chr4_4:47895156-47895175 Msa0684510:intron 5.0%
!!! TTGATTTTTTTTTTTTTTTT+GGG + chr4_4:47895157-47895176 Msa0684510:intron 5.0%
!!! AAATAACATTTTAATAAATA+TGG - chr4_4:47896441-47896460 None:intergenic 5.0%
TTCTTCTCGTTGCGCGATGT+AGG - chr4_4:47886542-47886561 None:intergenic 50.0%
AAGTGGACCCACGAGATTAG+AGG - chr4_4:47886624-47886643 None:intergenic 50.0%
GGTAACACCTCAGTCGAGTA+TGG + chr4_4:47887186-47887205 Msa0684510:intron 50.0%
ACCTCAGTCGAGTATGGTTG+CGG + chr4_4:47887192-47887211 Msa0684510:intron 50.0%
CTTGTGGGACATAGCCGATT+TGG - chr4_4:47887334-47887353 None:intergenic 50.0%
CGTTCCCGGACATCCAAAAA+AGG + chr4_4:47887627-47887646 Msa0684510:intron 50.0%
CAATTCACCAGGGGGGATAA+GGG - chr4_4:47887709-47887728 None:intergenic 50.0%
TCAATTCACCAGGGGGGATA+AGG - chr4_4:47887710-47887729 None:intergenic 50.0%
TGGGAAGGTCAATTCACCAG+GGG - chr4_4:47887718-47887737 None:intergenic 50.0%
CATGGGAAGGTCAATTCACC+AGG - chr4_4:47887720-47887739 None:intergenic 50.0%
TTGACTGTATGCACTGGGAG+TGG - chr4_4:47887759-47887778 None:intergenic 50.0%
CTTTGCAGGTCATCTTCGGT+TGG + chr4_4:47887829-47887848 Msa0684510:intron 50.0%
ATATGGTGTGGCAGCAGATG+CGG - chr4_4:47887956-47887975 None:intergenic 50.0%
!! CAATGTTTCGTCGTCGGTTC+CGG - chr4_4:47888116-47888135 None:intergenic 50.0%
!! GAAGGTAGTGGATCAGGTAG+TGG - chr4_4:47888233-47888252 None:intergenic 50.0%
!! CTAGAGGAAGGTAGTGGATC+AGG - chr4_4:47888239-47888258 None:intergenic 50.0%
GGGGAGTGAAGCAATACCAT+GGG + chr4_4:47888491-47888510 Msa0684510:intron 50.0%
CTTTACTATGCCACAGCCCA+TGG - chr4_4:47888538-47888557 None:intergenic 50.0%
CTTTACTATGCCACAGCCCA+TGG - chr4_4:47888538-47888557 None:intergenic 50.0%
!! CCCAAGAGCATCTCAATGAC+AGG - chr4_4:47888950-47888969 None:intergenic 50.0%
GGAGGAGGTGGAAAATGAGT+GGG - chr4_4:47889104-47889123 None:intergenic 50.0%
TGGAGGAGGTGGAAAATGAG+TGG - chr4_4:47889105-47889124 None:intergenic 50.0%
! GAAAAACAAGGACGCTGGCT+TGG - chr4_4:47889125-47889144 None:intergenic 50.0%
TAGTGCTCGTCCAATGGGTA+GGG - chr4_4:47889173-47889192 None:intergenic 50.0%
GGATCTAGTGCTCGTCCAAT+GGG - chr4_4:47889178-47889197 None:intergenic 50.0%
AGGATCTAGTGCTCGTCCAA+TGG - chr4_4:47889179-47889198 None:intergenic 50.0%
! TGCCGTAACGAGGTTGATCA+CGG + chr4_4:47889278-47889297 Msa0684510:intron 50.0%
CTCCGTGATCAACCTCGTTA+CGG - chr4_4:47889283-47889302 None:intergenic 50.0%
TCAGAAAGCAAGCGGTTGGT+CGG - chr4_4:47889389-47889408 None:intergenic 50.0%
GCTAAGCGTCAGAAAGCAAG+CGG - chr4_4:47889397-47889416 None:intergenic 50.0%
GCTTGCTTTCTGACGCTTAG+CGG + chr4_4:47889396-47889415 Msa0684510:intron 50.0%
CAGTGTTCCATGATGGTTGC+TGG + chr4_4:47889629-47889648 Msa0684510:intron 50.0%
AACAGCTGGCGCGTTTGTAT+TGG - chr4_4:47890296-47890315 None:intergenic 50.0%
GAGAGTGACATGGAGGAGTT+GGG - chr4_4:47890469-47890488 None:intergenic 50.0%
TGAGAGTGACATGGAGGAGT+TGG - chr4_4:47890470-47890489 None:intergenic 50.0%
! GCTTGTTGAGAGTGACATGG+AGG - chr4_4:47890476-47890495 None:intergenic 50.0%
CTCTTAGACCATCCCCAATG+GGG - chr4_4:47890541-47890560 None:intergenic 50.0%
CCTCTTAGACCATCCCCAAT+GGG - chr4_4:47890542-47890561 None:intergenic 50.0%
ACCTCTTAGACCATCCCCAA+TGG - chr4_4:47890543-47890562 None:intergenic 50.0%
!! GTGCAAGTCTTTTCGGTGTG+AGG + chr4_4:47890972-47890991 Msa0684510:intron 50.0%
!! CCCTCGGTTGATAGTAGGTT+AGG - chr4_4:47891069-47891088 None:intergenic 50.0%
GGGGATAGCTGAATTTCCCT+CGG - chr4_4:47891085-47891104 None:intergenic 50.0%
AGGTGGTGAAGCGGAGATTA+GGG - chr4_4:47891437-47891456 None:intergenic 50.0%
! TCGGCATTGAGAGAAGGTGA+AGG - chr4_4:47891495-47891514 None:intergenic 50.0%
! TCGAGTTCGGCATTGAGAGA+AGG - chr4_4:47891501-47891520 None:intergenic 50.0%
GCATGGAACAGCGGAGATAT+GGG - chr4_4:47891524-47891543 None:intergenic 50.0%
! ATAAGAACAGCGACTCGGAG+TGG - chr4_4:47891558-47891577 None:intergenic 50.0%
CGAGTCGCTGTTCTTATCAG+TGG + chr4_4:47891561-47891580 Msa0684510:CDS 50.0%
GTCGCTGTTCTTATCAGTGG+CGG + chr4_4:47891564-47891583 Msa0684510:CDS 50.0%
AACCTTCGCATAATGCCCAG+AGG - chr4_4:47893454-47893473 None:intergenic 50.0%
CCATCTCATCTGCAAATGGG+TGG - chr4_4:47893479-47893498 None:intergenic 50.0%
CCACCCATTTGCAGATGAGA+TGG + chr4_4:47893476-47893495 Msa0684510:CDS 50.0%
GGGACTGAGATAGGTGTGAT+AGG - chr4_4:47893810-47893829 None:intergenic 50.0%
CAGATGGTGTAGAAGGAGAC+AGG - chr4_4:47894016-47894035 None:intergenic 50.0%
TCTCCTTCTACACCATCTGC+AGG + chr4_4:47894017-47894036 Msa0684510:intron 50.0%
CATCCTGCAGATGGTGTAGA+AGG - chr4_4:47894023-47894042 None:intergenic 50.0%
! CAAATTTTGCGGCAAGCCTG+CGG - chr4_4:47894050-47894069 None:intergenic 50.0%
GCTGAGACTGGAGATTTCCT+TGG + chr4_4:47894461-47894480 Msa0684510:CDS 50.0%
AACAGAGAGGGGACAAACCA+TGG - chr4_4:47894551-47894570 None:intergenic 50.0%
GTTTCAAACAGGCTCGTGAG+CGG + chr4_4:47895015-47895034 Msa0684510:intron 50.0%
TTTCAAACAGGCTCGTGAGC+GGG + chr4_4:47895016-47895035 Msa0684510:intron 50.0%
! TGCATCGAAGCTGACTTCTC+TGG - chr4_4:47895579-47895598 None:intergenic 50.0%
GAGAAGTCAGCTTCGATGCA+AGG + chr4_4:47895579-47895598 Msa0684510:CDS 50.0%
AAGTCAGCTTCGATGCAAGG+TGG + chr4_4:47895582-47895601 Msa0684510:intron 50.0%
GGACCATGTCTCACCTGAAA+AGG - chr4_4:47895692-47895711 None:intergenic 50.0%
ATGATCAAGGCCTAGCAGCT+GGG + chr4_4:47895792-47895811 Msa0684510:CDS 50.0%
GCAGTTCACAGCCTTCTATG+AGG + chr4_4:47895814-47895833 Msa0684510:CDS 50.0%
CGGAATCACACACTTCTTGC+AGG - chr4_4:47895985-47896004 None:intergenic 50.0%
GGCATGTGCACACATGTGTT+AGG + chr4_4:47896134-47896153 Msa0684510:three_prime_UTR 50.0%
!! CTAGGTACTGGTCTCCCTTA+AGG + chr4_4:47896194-47896213 Msa0684510:three_prime_UTR 50.0%
CTAGATCTGCCTGCAATGCG+TGG + chr4_4:47887109-47887128 Msa0684510:intron 55.0%
ACCGCAACCATACTCGACTG+AGG - chr4_4:47887196-47887215 None:intergenic 55.0%
CTGTGAACCAGCTCGCTTGT+GGG - chr4_4:47887349-47887368 None:intergenic 55.0%
TCTGTGAACCAGCTCGCTTG+TGG - chr4_4:47887350-47887369 None:intergenic 55.0%
GGAAGGTCAATTCACCAGGG+GGG - chr4_4:47887716-47887735 None:intergenic 55.0%
GGGAAGGTCAATTCACCAGG+GGG - chr4_4:47887717-47887736 None:intergenic 55.0%
!! TGTTGGTGGCATCAACTCGC+TGG + chr4_4:47888028-47888047 Msa0684510:intron 55.0%
!! GTTGGTGGCATCAACTCGCT+GGG + chr4_4:47888029-47888048 Msa0684510:intron 55.0%
CGGGGAGTGAAGCAATACCA+TGG + chr4_4:47888490-47888509 Msa0684510:intron 55.0%
!! AAACAAGGACGCTGGCTTGG+AGG - chr4_4:47889122-47889141 None:intergenic 55.0%
TTAGCTGCCTCCCTACCCAT+TGG + chr4_4:47889160-47889179 Msa0684510:intron 55.0%
CTAGTGCTCGTCCAATGGGT+AGG - chr4_4:47889174-47889193 None:intergenic 55.0%
!! GTGGGAGGAAATGTTGGCTC+AGG - chr4_4:47889238-47889257 None:intergenic 55.0%
CAAGTGGGAGGCAGTCAAGT+GGG - chr4_4:47889256-47889275 None:intergenic 55.0%
TCAAGTGGGAGGCAGTCAAG+TGG - chr4_4:47889257-47889276 None:intergenic 55.0%
CCTCGTTACGGCAGTCAAGT+GGG - chr4_4:47889271-47889290 None:intergenic 55.0%
ACCTCGTTACGGCAGTCAAG+TGG - chr4_4:47889272-47889291 None:intergenic 55.0%
AGCGTCAGAAAGCAAGCGGT+TGG - chr4_4:47889393-47889412 None:intergenic 55.0%
CTGGTTTCTCCCGACAACAC+TGG + chr4_4:47889561-47889580 Msa0684510:intron 55.0%
CCCATTGGGGATGGTCTAAG+AGG + chr4_4:47890539-47890558 Msa0684510:intron 55.0%
AAATGGCAGCGCGGTTGAAC+TGG + chr4_4:47891352-47891371 Msa0684510:CDS 55.0%
GAGGTGGTGAAGCGGAGATT+AGG - chr4_4:47891438-47891457 None:intergenic 55.0%
GCGGAGATATGGGTCGAGTT+CGG - chr4_4:47891514-47891533 None:intergenic 55.0%
GGCATGGAACAGCGGAGATA+TGG - chr4_4:47891525-47891544 None:intergenic 55.0%
GTGTGGTCGAACTCCGAATC+CGG + chr4_4:47893242-47893261 Msa0684510:CDS 55.0%
TGCCTCTGGGCATTATGCGA+AGG + chr4_4:47893449-47893468 Msa0684510:CDS 55.0%
GCTTCAGCTGGGACTGAGAT+AGG - chr4_4:47893819-47893838 None:intergenic 55.0%
TGCGGACTTCATCCTGCAGA+TGG - chr4_4:47894032-47894051 None:intergenic 55.0%
ATCTGCAGGATGAAGTCCGC+AGG + chr4_4:47894031-47894050 Msa0684510:intron 55.0%
AGAAGCCCCGATGTTTGCCA+AGG - chr4_4:47894481-47894500 None:intergenic 55.0%
TTGGCAAACATCGGGGCTTC+TGG + chr4_4:47894480-47894499 Msa0684510:CDS 55.0%
TTGGTCAACGCCAGGGTCTA+CGG + chr4_4:47894513-47894532 Msa0684510:CDS 55.0%
! AGCTGACTTCTCTGGCTAGG+AGG - chr4_4:47895571-47895590 None:intergenic 55.0%
! CGAAGCTGACTTCTCTGGCT+AGG - chr4_4:47895574-47895593 None:intergenic 55.0%
CAGCTTCGATGCAAGGTGGA+TGG + chr4_4:47895586-47895605 Msa0684510:intron 55.0%
GATGATCAAGGCCTAGCAGC+TGG + chr4_4:47895791-47895810 Msa0684510:CDS 55.0%
TCCGGCATCCGAAAATTGGC+AGG + chr4_4:47896113-47896132 Msa0684510:three_prime_UTR 55.0%
! GCCTGCCAATTTTCGGATGC+CGG - chr4_4:47896117-47896136 None:intergenic 55.0%
! TACTGGTCTCCCTTAAGGCG+TGG + chr4_4:47896199-47896218 Msa0684510:three_prime_UTR 55.0%
! ACTGGTCTCCCTTAAGGCGT+GGG + chr4_4:47896200-47896219 Msa0684510:three_prime_UTR 55.0%
GCTATGTCCCACAAGCGAGC+TGG + chr4_4:47887339-47887358 Msa0684510:intron 60.0%
GTGAAATGCGGGGGTTCCCA+GGG - chr4_4:47887795-47887814 None:intergenic 60.0%
AGTGAAATGCGGGGGTTCCC+AGG - chr4_4:47887796-47887815 None:intergenic 60.0%
TGCTCGTCCAATGGGTAGGG+AGG - chr4_4:47889170-47889189 None:intergenic 60.0%
CGTTACGGCAGTCAAGTGGG+AGG - chr4_4:47889268-47889287 None:intergenic 60.0%
CCCACTTGACTGCCGTAACG+AGG + chr4_4:47889268-47889287 Msa0684510:intron 60.0%
CGGCATGCAATGACATCGCG+TGG + chr4_4:47889475-47889494 Msa0684510:intron 60.0%
!! GCGCGTTTGTATTGGCTGGC+TGG - chr4_4:47890288-47890307 None:intergenic 60.0%
! GCTGGCGCGTTTGTATTGGC+TGG - chr4_4:47890292-47890311 None:intergenic 60.0%
TCTGCTGCGGCATGGAACAG+CGG - chr4_4:47891533-47891552 None:intergenic 60.0%
ACTCGGAGTGGCTTCTGCTG+CGG - chr4_4:47891546-47891565 None:intergenic 60.0%
TCGACAGCAGCGTTGCTCTC+CGG + chr4_4:47891589-47891608 Msa0684510:CDS 60.0%
CTCCGGCTTCTTCATGCTGC+CGG + chr4_4:47891606-47891625 Msa0684510:CDS 60.0%
GACCGGCAGCATGAAGAAGC+CGG - chr4_4:47891611-47891630 None:intergenic 60.0%
GGGACAAACCATGGACCTCC+AGG - chr4_4:47894542-47894561 None:intergenic 60.0%
CTGTGAACTGCCCAGCTGCT+AGG - chr4_4:47895805-47895824 None:intergenic 60.0%
GGTGGTTCCCTTATCCCCCC+TGG + chr4_4:47887699-47887718 Msa0684510:intron 65.0%
GGGGGTTCCCAGGGATGATC+AGG - chr4_4:47887786-47887805 None:intergenic 65.0%
!! CAAGGACGCTGGCTTGGAGG+AGG - chr4_4:47889119-47889138 None:intergenic 65.0%
GTGGGAGGCAGTCAAGTGGG+AGG - chr4_4:47889253-47889272 None:intergenic 65.0%
! GTGCAGTACACGCGCCGACA+GGG - chr4_4:47890370-47890389 None:intergenic 65.0%
CACAATCAAAGCGCGCCGCG+TGG + chr4_4:47890403-47890422 Msa0684510:intron 65.0%
TTCTGCACACGGGAGCCACG+CGG - chr4_4:47890421-47890440 None:intergenic 65.0%
GAGTGGCTTCTGCTGCGGCA+TGG - chr4_4:47891541-47891560 None:intergenic 65.0%
TACGGCTGCCTGGAGGTCCA+TGG + chr4_4:47894531-47894550 Msa0684510:CDS 65.0%
!! GGACGCTGGCTTGGAGGAGG+TGG - chr4_4:47889116-47889135 None:intergenic 70.0%
CGCGTCAGCTGCAGGGAGGT+CGG - chr4_4:47890347-47890366 None:intergenic 70.0%
GACAGGGCGCGTCAGCTGCA+GGG - chr4_4:47890354-47890373 None:intergenic 70.0%
CTGCAGCTGACGCGCCCTGT+CGG + chr4_4:47890353-47890372 Msa0684510:intron 70.0%
! CGTGCAGTACACGCGCCGAC+AGG - chr4_4:47890371-47890390 None:intergenic 70.0%
CTCCAGGCAGCCGTAGACCC+TGG - chr4_4:47894526-47894545 None:intergenic 70.0%
CAGGGTCTACGGCTGCCTGG+AGG + chr4_4:47894524-47894543 Msa0684510:CDS 70.0%
AGGGCGCGTCAGCTGCAGGG+AGG - chr4_4:47890351-47890370 None:intergenic 75.0%
CGACAGGGCGCGTCAGCTGC+AGG - chr4_4:47890355-47890374 None:intergenic 75.0%
CGCCAGGGTCTACGGCTGCC+TGG + chr4_4:47894521-47894540 Msa0684510:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 47886522 47896526 47886522 ID=Msa0684510;Name=Msa0684510
chr4_4 mRNA 47886522 47896526 47886522 ID=Msa0684510-mRNA-1;Parent=Msa0684510;Name=Msa0684510-mRNA-1;_AED=0.11;_eAED=0.11;_QI=124|1|1|1|0.81|0.66|12|476|487
chr4_4 exon 47886522 47886568 47886522 ID=Msa0684510-mRNA-1:exon:11822;Parent=Msa0684510-mRNA-1
chr4_4 exon 47891268 47891668 47891268 ID=Msa0684510-mRNA-1:exon:11823;Parent=Msa0684510-mRNA-1
chr4_4 exon 47891786 47891860 47891786 ID=Msa0684510-mRNA-1:exon:11824;Parent=Msa0684510-mRNA-1
chr4_4 exon 47892706 47892759 47892706 ID=Msa0684510-mRNA-1:exon:11825;Parent=Msa0684510-mRNA-1
chr4_4 exon 47893216 47893294 47893216 ID=Msa0684510-mRNA-1:exon:11826;Parent=Msa0684510-mRNA-1
chr4_4 exon 47893406 47893533 47893406 ID=Msa0684510-mRNA-1:exon:11827;Parent=Msa0684510-mRNA-1
chr4_4 exon 47893787 47893870 47893787 ID=Msa0684510-mRNA-1:exon:11828;Parent=Msa0684510-mRNA-1
chr4_4 exon 47894039 47894122 47894039 ID=Msa0684510-mRNA-1:exon:11829;Parent=Msa0684510-mRNA-1
chr4_4 exon 47894401 47894552 47894401 ID=Msa0684510-mRNA-1:exon:11830;Parent=Msa0684510-mRNA-1
chr4_4 exon 47895450 47895600 47895450 ID=Msa0684510-mRNA-1:exon:11831;Parent=Msa0684510-mRNA-1
chr4_4 exon 47895698 47896047 47895698 ID=Msa0684510-mRNA-1:exon:11832;Parent=Msa0684510-mRNA-1
chr4_4 exon 47896068 47896526 47896068 ID=Msa0684510-mRNA-1:exon:11833;Parent=Msa0684510-mRNA-1
chr4_4 five_prime_UTR 47886522 47886568 47886522 ID=Msa0684510-mRNA-1:five_prime_utr;Parent=Msa0684510-mRNA-1
chr4_4 five_prime_UTR 47891268 47891344 47891268 ID=Msa0684510-mRNA-1:five_prime_utr;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47891345 47891668 47891345 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47891786 47891860 47891786 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47892706 47892759 47892706 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47893216 47893294 47893216 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47893406 47893533 47893406 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47893787 47893870 47893787 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47894039 47894122 47894039 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47894401 47894552 47894401 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47895450 47895600 47895450 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 CDS 47895698 47896030 47895698 ID=Msa0684510-mRNA-1:cds;Parent=Msa0684510-mRNA-1
chr4_4 three_prime_UTR 47896031 47896047 47896031 ID=Msa0684510-mRNA-1:three_prime_utr;Parent=Msa0684510-mRNA-1
chr4_4 three_prime_UTR 47896068 47896526 47896068 ID=Msa0684510-mRNA-1:three_prime_utr;Parent=Msa0684510-mRNA-1
Gene Sequence

>Msa0684510

ATGTTGAAAATGGCAGCGCGGTTGAACTGGAGACCACTCTGTTCTCTCTCTCTATCTCACTTCACACACCAAAACCTCCGCAAAATAAACCCTAATCTCCGCTTCACCACCTCAAAACTATTCTGTTCCGATTCTCTTCAAACATCACCTTCACCTTCTCTCAATGCCGAACTCGACCCATATCTCCGCTGTTCCATGCCGCAGCAGAAGCCACTCCGAGTCGCTGTTCTTATCAGTGGCGGCGTCGACAGCAGCGTTGCTCTCCGGCTTCTTCATGCTGCCGGTCATTCTTGCACTGCTTTCTACCTTAAGATATGGTTCCAAGAAGATTTTGACAACTTTTGGACGGAATGTCCTTGGGAAGATGATTTGAAGTATGCTAGAGATGTTTGCAATCAGGTTGAAGTACCACTAGAAGTTGTTCATTTGACCGATGAATATTGGAAAAACGTGGTTTCCTACATCATTGAAGAGTATAGGTGTGGTCGAACTCCGAATCCGGATGTTCTATGCAATACAAGAATAAAGTTTGGTGCATTTTTGGATGCAATCGGTGGTATGGGTTTTGACTATGTTGCCTCTGGGCATTATGCGAAGGTTATCCACCCATTTGCAGATGAGATGGATGGGCCTTCTGCTCTAGAACTATCACAAGACACGGTAAAGGATCAAACTTACTTCCTATCACACCTATCTCAGTCCCAGCTGAAGCGACTTCTTTTTCCACTTGGTTCTATTCCTAAGGATGAAGTCCGCAGGCTTGCCGCAAAATTTGATCTACCAAATAAGGATAGAAAGGATTCCCAGGGAATATGCTTTTTGGGCAAGATAAAATTCAGTGAATTTGTTGCAAGACATATTGGGGAGAAAGAAGGCATCATACTGGAAGCTGAGACTGGAGATTTCCTTGGCAAACATCGGGGCTTCTGGTTTTATACTATTGGTCAACGCCAGGGTCTACGGCTGCCTGGAGGTCCATGGTATGTTGTTGAGAAGGATGTTAAAAACAATGTAGTTTTTGTGTCCAGAAATTACTTTTCCTTTGACAAAAAAAGGCGCATATTCCGTGTTGGGTCTTTTAAATGGCTTAGTGGGATGCCTCCTAGCCAGAGAAGTCAGCTTCGATGCAAGGTGAGACATGGTCCCGTGTTCTACGATTGTAGCTTAGAAATGGAACTTGGAGAAGATAACGTAATTGACTCTGCTGTCGTCCGCATATCTGAAGATGATCAAGGCCTAGCAGCTGGGCAGTTCACAGCCTTCTATGAGGGAAGAACATGCATTGGTTCTGGTGTAATTTTGGAGTCCGGGGATGATCAAAGTTTTCCAGTATGCGCAAAAGCTTTGGAAATTGCACGAATGGAAGATAAATCAAAGATTGGGAATCCAGTTAAGATAAAAGTTAAACCAGATAACCTGCAAGAAGTGTGTGATTCCGCAGAATTGGCAAGTAAAGCATCATAG
Protein sequence

>Msa0684510

MLKMAARLNWRPLCSLSLSHFTHQNLRKINPNLRFTTSKLFCSDSLQTSPSPSLNAELDPYLRCSMPQQKPLRVAVLISGGVDSSVALRLLHAAGHSCTAFYLKIWFQEDFDNFWTECPWEDDLKYARDVCNQVEVPLEVVHLTDEYWKNVVSYIIEEYRCGRTPNPDVLCNTRIKFGAFLDAIGGMGFDYVASGHYAKVIHPFADEMDGPSALELSQDTVKDQTYFLSHLSQSQLKRLLFPLGSIPKDEVRRLAAKFDLPNKDRKDSQGICFLGKIKFSEFVARHIGEKEGIILEAETGDFLGKHRGFWFYTIGQRQGLRLPGGPWYVVEKDVKNNVVFVSRNYFSFDKKRRIFRVGSFKWLSGMPPSQRSQLRCKVRHGPVFYDCSLEMELGEDNVIDSAVVRISEDDQGLAAGQFTAFYEGRTCIGSGVILESGDDQSFPVCAKALEIARMEDKSKIGNPVKIKVKPDNLQEVCDSAELASKAS*