Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646640 | XP_024636394.1 | 96.864 | 287 | 9 | 0 | 1 | 287 | 34 | 320 | 0.0 | 583 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646640 | sp|Q9XII1|PDV2_ARATH | 47.799 | 318 | 121 | 8 | 2 | 287 | 3 | 307 | 7.11e-82 | 252 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646640 | A0A072UX16 | 96.864 | 287 | 9 | 0 | 1 | 287 | 34 | 320 | 0.0 | 576 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa0646640 | -0.853928 | 1.726981e-61 | -8.615850e-47 |
| Msa0020630 | Msa0646640 | 0.828858 | 7.116709e-55 | -8.615850e-47 |
| Msa0024680 | Msa0646640 | 0.808935 | 2.425567e-50 | -8.615850e-47 |
| Msa0027540 | Msa0646640 | 0.844612 | 6.786311e-59 | -8.615850e-47 |
| Msa0030310 | Msa0646640 | 0.801829 | 7.484254e-49 | -8.615850e-47 |
| Msa0030380 | Msa0646640 | 0.856025 | 4.251365e-62 | -8.615850e-47 |
| Msa0032120 | Msa0646640 | 0.808779 | 2.618368e-50 | -8.615850e-47 |
| Msa0032840 | Msa0646640 | -0.810206 | 1.293612e-50 | -8.615850e-47 |
| Msa0038350 | Msa0646640 | -0.821391 | 4.139673e-53 | -8.615850e-47 |
| Msa0043940 | Msa0646640 | 0.804438 | 2.160147e-49 | -8.615850e-47 |
| Msa0044710 | Msa0646640 | 0.877146 | 7.938709e-69 | -8.615850e-47 |
| Msa0046660 | Msa0646640 | -0.830115 | 3.521277e-55 | -8.615850e-47 |
| Msa0049650 | Msa0646640 | -0.812715 | 3.687170e-51 | -8.615850e-47 |
| Msa0050720 | Msa0646640 | 0.827640 | 1.399547e-54 | -8.615850e-47 |
| Msa0050770 | Msa0646640 | 0.811492 | 6.813100e-51 | -8.615850e-47 |
| Msa0061310 | Msa0646640 | 0.800599 | 1.336568e-48 | -8.615850e-47 |
| Msa0075310 | Msa0646640 | 0.844480 | 7.365866e-59 | -8.615850e-47 |
| Msa0079250 | Msa0646640 | 0.813066 | 3.088685e-51 | -8.615850e-47 |
| Msa0084680 | Msa0646640 | 0.810106 | 1.359135e-50 | -8.615850e-47 |
| Msa0091770 | Msa0646640 | 0.814263 | 1.683792e-51 | -8.615850e-47 |
| Msa0094100 | Msa0646640 | 0.816477 | 5.419931e-52 | -8.615850e-47 |
| Msa0095380 | Msa0646640 | 0.823698 | 1.204036e-53 | -8.615850e-47 |
| Msa0114250 | Msa0646640 | 0.810390 | 1.180487e-50 | -8.615850e-47 |
| Msa0119850 | Msa0646640 | 0.811744 | 6.006728e-51 | -8.615850e-47 |
| Msa0605170 | Msa0646640 | 0.897926 | 8.752250e-77 | -8.615850e-47 |
| Msa0605620 | Msa0646640 | 0.812196 | 4.788838e-51 | -8.615850e-47 |
| Msa0607200 | Msa0646640 | 0.837342 | 5.501724e-57 | -8.615850e-47 |
| Msa0607340 | Msa0646640 | -0.860486 | 1.997793e-63 | -8.615850e-47 |
| Msa0618010 | Msa0646640 | 0.836716 | 7.950518e-57 | -8.615850e-47 |
| Msa0619070 | Msa0646640 | 0.800996 | 1.108724e-48 | -8.615850e-47 |
| Msa0621120 | Msa0646640 | 0.832282 | 1.033509e-55 | -8.615850e-47 |
| Msa0624730 | Msa0646640 | 0.808153 | 3.561288e-50 | -8.615850e-47 |
| Msa0625530 | Msa0646640 | -0.824418 | 8.158986e-54 | -8.615850e-47 |
| Msa0629370 | Msa0646640 | 0.816699 | 4.833753e-52 | -8.615850e-47 |
| Msa0630990 | Msa0646640 | 0.810376 | 1.188520e-50 | -8.615850e-47 |
| Msa0638280 | Msa0646640 | 0.819671 | 1.027399e-52 | -8.615850e-47 |
| Msa0638320 | Msa0646640 | 0.821716 | 3.482085e-53 | -8.615850e-47 |
| Msa0642650 | Msa0646640 | 0.804162 | 2.465902e-49 | -8.615850e-47 |
| Msa0646640 | Msa0647450 | -0.859223 | 4.800039e-63 | -8.615850e-47 |
| Msa0646640 | Msa0649420 | 0.801005 | 1.103947e-48 | -8.615850e-47 |
| Msa0646640 | Msa0651400 | 0.817807 | 2.722940e-52 | -8.615850e-47 |
| Msa0646640 | Msa0655660 | -0.811360 | 7.279141e-51 | -8.615850e-47 |
| Msa0646640 | Msa0657670 | 0.829225 | 5.799049e-55 | -8.615850e-47 |
| Msa0646640 | Msa0661190 | -0.802247 | 6.141195e-49 | -8.615850e-47 |
| Msa0646640 | Msa0669850 | 0.855663 | 5.422504e-62 | -8.615850e-47 |
| Msa0646640 | Msa0672120 | 0.813715 | 2.224927e-51 | -8.615850e-47 |
| Msa0646640 | Msa0677270 | 0.822924 | 1.825881e-53 | -8.615850e-47 |
| Msa0646640 | Msa0684180 | -0.801999 | 6.905989e-49 | -8.615850e-47 |
| Msa0646640 | Msa0684510 | 0.803127 | 4.043552e-49 | -8.615850e-47 |
| Msa0646640 | Msa0701030 | 0.806634 | 7.479095e-50 | -8.615850e-47 |
| Msa0646640 | Msa0703590 | 0.821419 | 4.077793e-53 | -8.615850e-47 |
| Msa0646640 | Msa0704220 | 0.830957 | 2.191148e-55 | -8.615850e-47 |
| Msa0646640 | Msa0705420 | 0.809962 | 1.459545e-50 | -8.615850e-47 |
| Msa0646640 | Msa0709190 | 0.822217 | 2.665183e-53 | -8.615850e-47 |
| Msa0646640 | Msa0712980 | 0.808673 | 2.759192e-50 | -8.615850e-47 |
| Msa0646640 | Msa0714600 | 0.815826 | 7.578265e-52 | -8.615850e-47 |
| Msa0646640 | Msa0730180 | 0.810258 | 1.260730e-50 | -8.615850e-47 |
| Msa0646640 | Msa0734660 | 0.826721 | 2.322729e-54 | -8.615850e-47 |
| Msa0646640 | Msa0743260 | 0.805397 | 1.361707e-49 | -8.615850e-47 |
| Msa0646640 | Msa0743650 | 0.816113 | 6.538186e-52 | -8.615850e-47 |
| Msa0646640 | Msa0756630 | -0.807257 | 5.522221e-50 | -8.615850e-47 |
| Msa0646640 | Msa0760890 | 0.805666 | 1.195832e-49 | -8.615850e-47 |
| Msa0646640 | Msa0769830 | 0.817419 | 3.329895e-52 | -8.615850e-47 |
| Msa0646640 | Msa0776220 | 0.834821 | 2.401641e-56 | -8.615850e-47 |
| Msa0646640 | Msa0789270 | 0.806083 | 9.770186e-50 | -8.615850e-47 |
| Msa0646640 | Msa0789280 | 0.806603 | 7.592874e-50 | -8.615850e-47 |
| Msa0646640 | Msa0789290 | 0.803641 | 3.163723e-49 | -8.615850e-47 |
| Msa0646640 | Msa0789570 | 0.803078 | 4.137667e-49 | -8.615850e-47 |
| Msa0646640 | Msa0790390 | -0.808387 | 3.175475e-50 | -8.615850e-47 |
| Msa0646640 | Msa0804120 | 0.837231 | 5.873877e-57 | -8.615850e-47 |
| Msa0646640 | Msa0809300 | 0.800772 | 1.232320e-48 | -8.615850e-47 |
| Msa0646640 | Msa0813320 | -0.807490 | 4.926935e-50 | -8.615850e-47 |
| Msa0646640 | Msa0813670 | 0.835585 | 1.540347e-56 | -8.615850e-47 |
| Msa0646640 | Msa0813720 | 0.869692 | 2.559294e-66 | -8.615850e-47 |
| Msa0646640 | Msa0828570 | 0.817826 | 2.695776e-52 | -8.615850e-47 |
| Msa0646640 | Msa0831580 | 0.800036 | 1.739671e-48 | -8.615850e-47 |
| Msa0646640 | Msa0842210 | 0.808621 | 2.830346e-50 | -8.615850e-47 |
| Msa0646640 | Msa0845750 | 0.805946 | 1.044114e-49 | -8.615850e-47 |
| Msa0646640 | Msa0847200 | 0.809330 | 1.996291e-50 | -8.615850e-47 |
| Msa0646640 | Msa0848760 | 0.808536 | 2.950795e-50 | -8.615850e-47 |
| Msa0646640 | Msa0853540 | 0.802315 | 5.948287e-49 | -8.615850e-47 |
| Msa0646640 | Msa0854120 | 0.811270 | 7.614147e-51 | -8.615850e-47 |
| Msa0646640 | Msa0854570 | 0.814226 | 1.716495e-51 | -8.615850e-47 |
| Msa0646640 | Msa0861040 | -0.823369 | 1.437516e-53 | -8.615850e-47 |
| Msa0646640 | Msa0863770 | 0.815019 | 1.145591e-51 | -8.615850e-47 |
| Msa0646640 | Msa0867050 | -0.844967 | 5.443577e-59 | -8.615850e-47 |
| Msa0646640 | Msa0874500 | 0.804321 | 2.284790e-49 | -8.615850e-47 |
| Msa0646640 | Msa0874760 | 0.800623 | 1.321539e-48 | -8.615850e-47 |
| Msa0646640 | Msa0878980 | -0.811767 | 5.938277e-51 | -8.615850e-47 |
| Msa0646640 | Msa0883030 | 0.824179 | 9.287164e-54 | -8.615850e-47 |
| Msa0646640 | Msa0890250 | 0.826483 | 2.645900e-54 | -8.615850e-47 |
| Msa0646640 | Msa0900630 | 0.802422 | 5.651804e-49 | -8.615850e-47 |
| Msa0646640 | Msa0907700 | 0.815655 | 8.271427e-52 | -8.615850e-47 |
| Msa0646640 | Msa0909710 | 0.800391 | 1.473239e-48 | -8.615850e-47 |
| Msa0646640 | Msa0925160 | 0.827766 | 1.305352e-54 | -8.615850e-47 |
| Msa0646640 | Msa0937670 | 0.805400 | 1.359670e-49 | -8.615850e-47 |
| Msa0646640 | Msa0949600 | 0.803036 | 4.221913e-49 | -8.615850e-47 |
| Msa0646640 | Msa0950320 | 0.835193 | 1.934918e-56 | -8.615850e-47 |
| Msa0646640 | Msa0955260 | 0.808037 | 3.770758e-50 | -8.615850e-47 |
| Msa0646640 | Msa0965860 | 0.808110 | 3.638812e-50 | -8.615850e-47 |
| Msa0646640 | Msa0970570 | -0.800327 | 1.518329e-48 | -8.615850e-47 |
| Msa0646640 | Msa0980500 | 0.801975 | 6.985885e-49 | -8.615850e-47 |
| Msa0646640 | Msa0990520 | 0.802307 | 5.968731e-49 | -8.615850e-47 |
| Msa0646640 | Msa0992490 | -0.807434 | 5.065241e-50 | -8.615850e-47 |
| Msa0646640 | Msa1001450 | 0.810278 | 1.247983e-50 | -8.615850e-47 |
| Msa0646640 | Msa1004210 | 0.808647 | 2.794152e-50 | -8.615850e-47 |
| Msa0646640 | Msa1004900 | -0.835657 | 1.477151e-56 | -8.615850e-47 |
| Msa0646640 | Msa1007610 | -0.806220 | 9.142766e-50 | -8.615850e-47 |
| Msa0646640 | Msa1026760 | 0.800970 | 1.122418e-48 | -8.615850e-47 |
| Msa0646640 | Msa1026790 | 0.801187 | 1.013293e-48 | -8.615850e-47 |
| Msa0646640 | Msa1036390 | 0.813361 | 2.661820e-51 | -8.615850e-47 |
| Msa0646640 | Msa1037000 | 0.822577 | 2.199221e-53 | -8.615850e-47 |
| Msa0646640 | Msa1038050 | 0.816447 | 5.505136e-52 | -8.615850e-47 |
| Msa0646640 | Msa1044340 | 0.814072 | 1.856219e-51 | -8.615850e-47 |
| Msa0646640 | Msa1046610 | 0.813990 | 1.934718e-51 | -8.615850e-47 |
| Msa0646640 | Msa1049410 | 0.810403 | 1.172905e-50 | -8.615850e-47 |
| Msa0646640 | Msa1054240 | 0.801019 | 1.096990e-48 | -8.615850e-47 |
| Msa0646640 | Msa1058010 | 0.837955 | 3.829418e-57 | -8.615850e-47 |
| Msa0646640 | Msa1072460 | -0.870537 | 1.354124e-66 | -8.615850e-47 |
| Msa0646640 | Msa1073840 | 0.815842 | 7.514155e-52 | -8.615850e-47 |
| Msa0646640 | Msa1097380 | 0.803961 | 2.714388e-49 | -8.615850e-47 |
| Msa0646640 | Msa1111630 | 0.819606 | 1.063102e-52 | -8.615850e-47 |
| Msa0646640 | Msa1112000 | 0.807880 | 4.072949e-50 | -8.615850e-47 |
| Msa0646640 | Msa1115330 | 0.806982 | 6.313039e-50 | -8.615850e-47 |
| Msa0646640 | Msa1129560 | 0.800719 | 1.263383e-48 | -8.615850e-47 |
| Msa0646640 | Msa1132520 | 0.820108 | 8.162829e-53 | -8.615850e-47 |
| Msa0646640 | Msa1143930 | -0.824870 | 6.386608e-54 | -8.615850e-47 |
| Msa0646640 | Msa1157420 | -0.813447 | 2.547642e-51 | -8.615850e-47 |
| Msa0646640 | Msa1166240 | -0.813732 | 2.205126e-51 | -8.615850e-47 |
| Msa0646640 | Msa1167170 | 0.802182 | 6.332873e-49 | -8.615850e-47 |
| Msa0646640 | Msa1171690 | 0.841426 | 4.787774e-58 | -8.615850e-47 |
| Msa0646640 | Msa1177240 | 0.840965 | 6.325273e-58 | -8.615850e-47 |
| Msa0646640 | Msa1188940 | 0.829038 | 6.437505e-55 | -8.615850e-47 |
| Msa0646640 | Msa1204980 | -0.806646 | 7.435517e-50 | -8.615850e-47 |
| Msa0646640 | Msa1205010 | -0.813555 | 2.412001e-51 | -8.615850e-47 |
| Msa0646640 | Msa1206020 | 0.800934 | 1.141834e-48 | -8.615850e-47 |
| Msa0646640 | Msa1210770 | 0.813108 | 3.025036e-51 | -8.615850e-47 |
| Msa0646640 | Msa1211090 | 0.804452 | 2.145715e-49 | -8.615850e-47 |
| Msa0646640 | Msa1224670 | 0.803003 | 4.289715e-49 | -8.615850e-47 |
| Msa0646640 | Msa1229660 | 0.806704 | 7.229839e-50 | -8.615850e-47 |
| Msa0646640 | Msa1237030 | 0.813719 | 2.219672e-51 | -8.615850e-47 |
| Msa0646640 | Msa1256540 | -0.804470 | 2.127683e-49 | -8.615850e-47 |
| Msa0646640 | Msa1260130 | 0.823318 | 1.477510e-53 | -8.615850e-47 |
| Msa0646640 | Msa1265960 | 0.825981 | 3.484826e-54 | -8.615850e-47 |
| Msa0646640 | Msa1270960 | -0.812246 | 4.669005e-51 | -8.615850e-47 |
| Msa0646640 | Msa1280130 | 0.827798 | 1.281961e-54 | -8.615850e-47 |
| Msa0646640 | Msa1282920 | 0.814100 | 1.829675e-51 | -8.615850e-47 |
| Msa0646640 | Msa1284520 | 0.841524 | 4.510220e-58 | -8.615850e-47 |
| Msa0646640 | Msa1300050 | 0.824254 | 8.915210e-54 | -8.615850e-47 |
| Msa0646640 | Msa1302190 | -0.813444 | 2.551222e-51 | -8.615850e-47 |
| Msa0646640 | Msa1302460 | 0.817350 | 3.451594e-52 | -8.615850e-47 |
| Msa0646640 | Msa1317030 | 0.842431 | 2.596120e-58 | -8.615850e-47 |
| Msa0646640 | Msa1335860 | 0.809984 | 1.443990e-50 | -8.615850e-47 |
| Msa0646640 | Msa1337090 | 0.806162 | 9.403912e-50 | -8.615850e-47 |
| Msa0646640 | Msa1369530 | 0.823460 | 1.368856e-53 | -8.615850e-47 |
| Msa0646640 | Msa1385620 | 0.814512 | 1.483482e-51 | -8.615850e-47 |
| Msa0646640 | Msa1385900 | 0.806503 | 7.970806e-50 | -8.615850e-47 |
| Msa0646640 | Msa1391490 | 0.801696 | 7.970493e-49 | -8.615850e-47 |
| Msa0646640 | Msa1395230 | -0.855835 | 4.832801e-62 | -8.615850e-47 |
| Msa0646640 | Msa1398480 | 0.823689 | 1.209991e-53 | -8.615850e-47 |
| Msa0646640 | Msa1398800 | 0.800396 | 1.469981e-48 | -8.615850e-47 |
| Msa0646640 | Msa1403580 | -0.801836 | 7.460912e-49 | -8.615850e-47 |
| Msa0646640 | Msa1403930 | -0.860911 | 1.484597e-63 | -8.615850e-47 |
| Msa0646640 | Msa1410430 | -0.840668 | 7.568595e-58 | -8.615850e-47 |
| Msa0646640 | Msa1415240 | -0.802109 | 6.555825e-49 | -8.615850e-47 |
| Msa0646640 | Msa1418200 | 0.800696 | 1.276684e-48 | -8.615850e-47 |
| Msa0646640 | Msa1419800 | -0.832316 | 1.013306e-55 | -8.615850e-47 |
| Msa0646640 | Msa1427830 | 0.831471 | 1.638707e-55 | -8.615850e-47 |
| Msa0646640 | Msa1431000 | 0.814376 | 1.589619e-51 | -8.615850e-47 |
| Msa0646640 | Msa1432400 | 0.834704 | 2.569716e-56 | -8.615850e-47 |
| Msa0646640 | Msa1432640 | 0.828474 | 8.814135e-55 | -8.615850e-47 |
| Msa0646640 | Msa1439120 | 0.805435 | 1.336531e-49 | -8.615850e-47 |
| Msa0646640 | Msa1439530 | 0.812117 | 4.982102e-51 | -8.615850e-47 |
| Msa0646640 | Msa1440610 | 0.826464 | 2.674884e-54 | -8.615850e-47 |
| Msa0646640 | Msa1443290 | -0.802808 | 4.706628e-49 | -8.615850e-47 |
| Msa0646640 | Msa1449250 | -0.808050 | 3.747422e-50 | -8.615850e-47 |
| Msa0646640 | Msa1449880 | 0.817851 | 2.661063e-52 | -8.615850e-47 |
| Msa0646640 | Msa1453620 | 0.830304 | 3.167564e-55 | -8.615850e-47 |
| Msa0646640 | Msa1453780 | -0.818307 | 2.098505e-52 | -8.615850e-47 |
| Msa0646640 | Msa1454110 | 0.830498 | 2.838985e-55 | -8.615850e-47 |
| Msa0646640 | Msa1455660 | 0.807068 | 6.053589e-50 | -8.615850e-47 |
| Msa0646640 | Msa1463970 | 0.816970 | 4.202492e-52 | -8.615850e-47 |
| Msa0646640 | Msa1464560 | 0.808042 | 3.762055e-50 | -8.615850e-47 |
| Msa0646640 | Msa1464830 | 0.809745 | 1.625196e-50 | -8.615850e-47 |
| Msa0646640 | Msa1465960 | 0.807823 | 4.186773e-50 | -8.615850e-47 |
| Msa0129790 | Msa0646640 | -0.817674 | 2.917906e-52 | -8.615850e-47 |
| Msa0140220 | Msa0646640 | 0.821784 | 3.358635e-53 | -8.615850e-47 |
| Msa0142420 | Msa0646640 | 0.800674 | 1.290349e-48 | -8.615850e-47 |
| Msa0143140 | Msa0646640 | -0.815371 | 9.565210e-52 | -8.615850e-47 |
| Msa0145950 | Msa0646640 | 0.812606 | 3.896421e-51 | -8.615850e-47 |
| Msa0156650 | Msa0646640 | -0.845746 | 3.349928e-59 | -8.615850e-47 |
| Msa0159750 | Msa0646640 | 0.824056 | 9.925838e-54 | -8.615850e-47 |
| Msa0162770 | Msa0646640 | -0.831419 | 1.686915e-55 | -8.615850e-47 |
| Msa0168100 | Msa0646640 | 0.854433 | 1.235090e-61 | -8.615850e-47 |
| Msa0168640 | Msa0646640 | -0.809321 | 2.004764e-50 | -8.615850e-47 |
| Msa0169140 | Msa0646640 | -0.815984 | 6.985126e-52 | -8.615850e-47 |
| Msa0169620 | Msa0646640 | 0.817550 | 3.111057e-52 | -8.615850e-47 |
| Msa0173740 | Msa0646640 | 0.856802 | 2.514023e-62 | -8.615850e-47 |
| Msa0173820 | Msa0646640 | 0.855089 | 7.972132e-62 | -8.615850e-47 |
| Msa0173830 | Msa0646640 | 0.860390 | 2.135710e-63 | -8.615850e-47 |
| Msa0182930 | Msa0646640 | 0.872877 | 2.268445e-67 | -8.615850e-47 |
| Msa0183620 | Msa0646640 | 0.830775 | 2.429199e-55 | -8.615850e-47 |
| Msa0185640 | Msa0646640 | -0.805024 | 1.630014e-49 | -8.615850e-47 |
| Msa0188680 | Msa0646640 | -0.806075 | 9.807733e-50 | -8.615850e-47 |
| Msa0194970 | Msa0646640 | 0.823249 | 1.533070e-53 | -8.615850e-47 |
| Msa0196130 | Msa0646640 | -0.817271 | 3.596321e-52 | -8.615850e-47 |
| Msa0200950 | Msa0646640 | -0.872199 | 3.821112e-67 | -8.615850e-47 |
| Msa0207000 | Msa0646640 | 0.838332 | 3.062573e-57 | -8.615850e-47 |
| Msa0208630 | Msa0646640 | 0.832342 | 9.986571e-56 | -8.615850e-47 |
| Msa0230550 | Msa0646640 | -0.812871 | 3.409070e-51 | -8.615850e-47 |
| Msa0238070 | Msa0646640 | -0.835353 | 1.763366e-56 | -8.615850e-47 |
| Msa0238250 | Msa0646640 | -0.818963 | 1.489483e-52 | -8.615850e-47 |
| Msa0375060 | Msa0646640 | -0.801512 | 8.693526e-49 | -8.615850e-47 |
| Msa0376510 | Msa0646640 | 0.841128 | 5.734361e-58 | -8.615850e-47 |
| Msa0378080 | Msa0646640 | 0.844657 | 6.600752e-59 | -8.615850e-47 |
| Msa0380040 | Msa0646640 | 0.833535 | 5.043004e-56 | -8.615850e-47 |
| Msa0392070 | Msa0646640 | 0.800130 | 1.664922e-48 | -8.615850e-47 |
| Msa0414950 | Msa0646640 | -0.810041 | 1.403973e-50 | -8.615850e-47 |
| Msa0416890 | Msa0646640 | -0.815523 | 8.852536e-52 | -8.615850e-47 |
| Msa0421780 | Msa0646640 | -0.800284 | 1.549294e-48 | -8.615850e-47 |
| Msa0423360 | Msa0646640 | -0.832265 | 1.043572e-55 | -8.615850e-47 |
| Msa0425050 | Msa0646640 | 0.841144 | 5.678009e-58 | -8.615850e-47 |
| Msa0429290 | Msa0646640 | 0.837668 | 4.537237e-57 | -8.615850e-47 |
| Msa0430620 | Msa0646640 | 0.831224 | 1.884789e-55 | -8.615850e-47 |
| Msa0439140 | Msa0646640 | 0.803070 | 4.155381e-49 | -8.615850e-47 |
| Msa0440130 | Msa0646640 | -0.809016 | 2.330822e-50 | -8.615850e-47 |
| Msa0442850 | Msa0646640 | 0.818756 | 1.660141e-52 | -8.615850e-47 |
| Msa0448080 | Msa0646640 | 0.805223 | 1.481049e-49 | -8.615850e-47 |
| Msa0462590 | Msa0646640 | 0.821552 | 3.799622e-53 | -8.615850e-47 |
| Msa0465790 | Msa0646640 | 0.841278 | 5.236961e-58 | -8.615850e-47 |
| Msa0467900 | Msa0646640 | -0.832334 | 1.002811e-55 | -8.615850e-47 |
| Msa0467960 | Msa0646640 | -0.825295 | 5.068222e-54 | -8.615850e-47 |
| Msa0468160 | Msa0646640 | 0.823479 | 1.355078e-53 | -8.615850e-47 |
| Msa0469910 | Msa0646640 | -0.816520 | 5.300945e-52 | -8.615850e-47 |
| Msa0470180 | Msa0646640 | 0.844847 | 5.868227e-59 | -8.615850e-47 |
| Msa0475580 | Msa0646640 | 0.834603 | 2.724834e-56 | -8.615850e-47 |
| Msa0480320 | Msa0646640 | 0.810179 | 1.311076e-50 | -8.615850e-47 |
| Msa0240780 | Msa0646640 | 0.815288 | 9.983006e-52 | -8.615850e-47 |
| Msa0244270 | Msa0646640 | 0.830673 | 2.573060e-55 | -8.615850e-47 |
| Msa0258670 | Msa0646640 | -0.867145 | 1.697697e-65 | -8.615850e-47 |
| Msa0259860 | Msa0646640 | -0.827344 | 1.647356e-54 | -8.615850e-47 |
| Msa0260950 | Msa0646640 | -0.807490 | 4.928451e-50 | -8.615850e-47 |
| Msa0265580 | Msa0646640 | 0.800677 | 1.288064e-48 | -8.615850e-47 |
| Msa0265820 | Msa0646640 | 0.817807 | 2.722766e-52 | -8.615850e-47 |
| Msa0267760 | Msa0646640 | 0.810145 | 1.333434e-50 | -8.615850e-47 |
| Msa0275030 | Msa0646640 | 0.846907 | 1.616508e-59 | -8.615850e-47 |
| Msa0280490 | Msa0646640 | 0.803362 | 3.614151e-49 | -8.615850e-47 |
| Msa0280900 | Msa0646640 | 0.818608 | 1.794048e-52 | -8.615850e-47 |
| Msa0288240 | Msa0646640 | 0.840356 | 9.135701e-58 | -8.615850e-47 |
| Msa0288330 | Msa0646640 | 0.833382 | 5.506324e-56 | -8.615850e-47 |
| Msa0294560 | Msa0646640 | -0.802954 | 4.390658e-49 | -8.615850e-47 |
| Msa0296760 | Msa0646640 | 0.809619 | 1.730108e-50 | -8.615850e-47 |
| Msa0309650 | Msa0646640 | -0.800556 | 1.363707e-48 | -8.615850e-47 |
| Msa0318250 | Msa0646640 | 0.847535 | 1.087819e-59 | -8.615850e-47 |
| Msa0318270 | Msa0646640 | 0.849041 | 4.170061e-60 | -8.615850e-47 |
| Msa0318310 | Msa0646640 | 0.838074 | 3.569286e-57 | -8.615850e-47 |
| Msa0319200 | Msa0646640 | 0.807807 | 4.220267e-50 | -8.615850e-47 |
| Msa0320100 | Msa0646640 | 0.810403 | 1.172592e-50 | -8.615850e-47 |
| Msa0326670 | Msa0646640 | 0.855609 | 5.623752e-62 | -8.615850e-47 |
| Msa0342200 | Msa0646640 | 0.810628 | 1.048546e-50 | -8.615850e-47 |
| Msa0344830 | Msa0646640 | 0.809347 | 1.979129e-50 | -8.615850e-47 |
| Msa0352510 | Msa0646640 | 0.826837 | 2.178743e-54 | -8.615850e-47 |
| Msa0358170 | Msa0646640 | 0.854947 | 8.762620e-62 | -8.615850e-47 |
| Msa0490350 | Msa0646640 | 0.815000 | 1.156667e-51 | -8.615850e-47 |
| Msa0504020 | Msa0646640 | 0.822775 | 1.977981e-53 | -8.615850e-47 |
| Msa0508200 | Msa0646640 | 0.825121 | 5.570696e-54 | -8.615850e-47 |
| Msa0518040 | Msa0646640 | 0.853299 | 2.619867e-61 | -8.615850e-47 |
| Msa0519220 | Msa0646640 | 0.835551 | 1.571074e-56 | -8.615850e-47 |
| Msa0526640 | Msa0646640 | -0.825494 | 4.545734e-54 | -8.615850e-47 |
| Msa0526710 | Msa0646640 | 0.808227 | 3.435928e-50 | -8.615850e-47 |
| Msa0527590 | Msa0646640 | 0.804045 | 2.607999e-49 | -8.615850e-47 |
| Msa0527600 | Msa0646640 | 0.822798 | 1.953484e-53 | -8.615850e-47 |
| Msa0531990 | Msa0646640 | -0.803740 | 3.018179e-49 | -8.615850e-47 |
| Msa0532100 | Msa0646640 | -0.810528 | 1.102104e-50 | -8.615850e-47 |
| Msa0535030 | Msa0646640 | 0.841726 | 3.989994e-58 | -8.615850e-47 |
| Msa0535060 | Msa0646640 | 0.841903 | 3.581571e-58 | -8.615850e-47 |
| Msa0540070 | Msa0646640 | 0.821949 | 3.075888e-53 | -8.615850e-47 |
| Msa0546380 | Msa0646640 | 0.825282 | 5.104069e-54 | -8.615850e-47 |
| Msa0553220 | Msa0646640 | -0.865272 | 6.661262e-65 | -8.615850e-47 |
| Msa0562300 | Msa0646640 | -0.807063 | 6.069981e-50 | -8.615850e-47 |
| Msa0564930 | Msa0646640 | 0.833642 | 4.742908e-56 | -8.615850e-47 |
| Msa0576240 | Msa0646640 | 0.811203 | 7.872346e-51 | -8.615850e-47 |
| Msa0577940 | Msa0646640 | -0.818568 | 1.831608e-52 | -8.615850e-47 |
| Msa0578070 | Msa0646640 | -0.823543 | 1.308664e-53 | -8.615850e-47 |
| Msa0579290 | Msa0646640 | 0.831484 | 1.626405e-55 | -8.615850e-47 |
| Msa0579390 | Msa0646640 | 0.828659 | 7.949272e-55 | -8.615850e-47 |
| Msa0583740 | Msa0646640 | 0.837195 | 5.999681e-57 | -8.615850e-47 |
| Msa0585000 | Msa0646640 | -0.823972 | 1.038409e-53 | -8.615850e-47 |
| Msa0590680 | Msa0646640 | 0.821317 | 4.305854e-53 | -8.615850e-47 |
| Msa0591060 | Msa0646640 | 0.830911 | 2.248584e-55 | -8.615850e-47 |
| Msa0591770 | Msa0646640 | 0.842823 | 2.042930e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646640 | MtrunA17_Chr4g0034331 | 96.864 | 287 | 9 | 0 | 1 | 287 | 34 | 320 | 0.0 | 576 |
| Msa0646640 | MtrunA17_Chr2g0305561 | 95.455 | 154 | 7 | 0 | 134 | 287 | 1 | 154 | 6.62e-107 | 307 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0646640 | AT2G16070.2 | 47.799 | 318 | 121 | 8 | 2 | 287 | 3 | 307 | 7.23e-83 | 252 |
| Msa0646640 | AT2G16070.3 | 48.899 | 227 | 99 | 6 | 65 | 287 | 11 | 224 | 4.23e-61 | 193 |
| Msa0646640 | AT2G16070.1 | 48.899 | 227 | 99 | 6 | 65 | 287 | 11 | 224 | 4.23e-61 | 193 |
Find 88 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGATTACTGGTCAATATTT+AGG | 0.178796 | 4_3:+52434229 | Msa0646640:three_prime_UTR |
| CAACGAACCTTCTGCAAATT+AGG | 0.192387 | 4_3:-52433861 | None:intergenic |
| GACTCAGCTTTCTTCCTTGC+AGG | 0.213229 | 4_3:+52431011 | Msa0646640:CDS |
| GAGATCTACCACTGAAAATA+AGG | 0.238835 | 4_3:+52433926 | Msa0646640:CDS |
| GAGGCTGGTTGTAGCGTTAC+AGG | 0.300092 | 4_3:-52434540 | None:intergenic |
| CCACATCCATAGTTTATATC+AGG | 0.316941 | 4_3:-52434056 | None:intergenic |
| ATAAGACAATGCAAATAATA+TGG | 0.323340 | 4_3:-52430734 | None:intergenic |
| CTGAATAAGTCTTTGTTTGT+TGG | 0.340580 | 4_3:-52430779 | None:intergenic |
| GTTGCAGCAACAGCTGAAAA+TGG | 0.342115 | 4_3:-52434032 | None:intergenic |
| CCTCGTCTTCATCGTCTTCA+AGG | 0.349354 | 4_3:-52430939 | None:intergenic |
| GGAGTATAAAGGAAAAGATT+TGG | 0.355923 | 4_3:+52433500 | Msa0646640:CDS |
| TTGGAAATGATATTTAGTTC+TGG | 0.357420 | 4_3:+52430706 | None:intergenic |
| AAAATTAAAACATAAAATAA+GGG | 0.363954 | 4_3:-52434129 | None:intergenic |
| TTGCGATGCACTCGAAGCTT+TGG | 0.364488 | 4_3:+52430987 | Msa0646640:CDS |
| GTGTCCACCTGGTAGAGTTT+TGG | 0.371016 | 4_3:+52433959 | Msa0646640:CDS |
| GCGCTTATGTGGGATTATAC+TGG | 0.377451 | 4_3:+52434390 | Msa0646640:three_prime_UTR |
| GCAACACCTGATATAAACTA+TGG | 0.384435 | 4_3:+52434050 | Msa0646640:CDS |
| ATATTGAGTATGTCAGGATT+TGG | 0.388003 | 4_3:+52433837 | Msa0646640:CDS |
| TATTTGCATTGTCTTATACT+TGG | 0.395247 | 4_3:+52430740 | Msa0646640:five_prime_UTR |
| AATAAGCTCAAGGAGTATAA+AGG | 0.395809 | 4_3:+52433489 | Msa0646640:CDS |
| TATGGAGGGCGGGTTGGATA+AGG | 0.395815 | 4_3:-52433591 | None:intergenic |
| GGTTGGCTCCACTGTTTCAC+TGG | 0.400114 | 4_3:-52433550 | None:intergenic |
| TGAGTGATTGGCATGATTAC+TGG | 0.401255 | 4_3:+52434217 | Msa0646640:three_prime_UTR |
| CGCAATTAAACACGCATATG+TGG | 0.401638 | 4_3:-52434370 | None:intergenic |
| CACTGTTTCACTGGCAAAAG+TGG | 0.402405 | 4_3:-52433541 | None:intergenic |
| CAATGGAAGAAGAAGGAATA+GGG | 0.402625 | 4_3:+52430836 | Msa0646640:exon |
| TATTGTAGTAGCTGAGTGAT+TGG | 0.403929 | 4_3:+52434205 | Msa0646640:three_prime_UTR |
| TCGTCTTCAAGGAGACCATT+AGG | 0.408182 | 4_3:-52430928 | None:intergenic |
| CATATGTGGGTAAATATCAT+AGG | 0.420229 | 4_3:-52434356 | None:intergenic |
| AAACCAACTTCTTCTCCTAA+TGG | 0.424275 | 4_3:+52430913 | Msa0646640:CDS |
| TTGTCAAGAGACATGGAATA+TGG | 0.435035 | 4_3:-52433609 | None:intergenic |
| ACAATGGAAGAAGAAGGAAT+AGG | 0.452375 | 4_3:+52430835 | Msa0646640:exon |
| AGCAAAATCATGTTGAAGAC+GGG | 0.457681 | 4_3:+52433733 | Msa0646640:CDS |
| AAAGCAGTGCTCACAGTTGT+TGG | 0.459690 | 4_3:+52433804 | Msa0646640:CDS |
| CACAGACTAGAAAATGAGAA+TGG | 0.463269 | 4_3:+52433903 | Msa0646640:CDS |
| AGGAGGAAGTAGTAGATCAT+TGG | 0.467708 | 4_3:-52433571 | None:intergenic |
| CGTGTTTAATTGCGCTTATG+TGG | 0.476934 | 4_3:+52434379 | Msa0646640:three_prime_UTR |
| ATGGAATATGGAGGGCGGGT+TGG | 0.479831 | 4_3:-52433597 | None:intergenic |
| ATCCCTTCTGTCAATAAGTC+CGG | 0.488206 | 4_3:+52433648 | Msa0646640:CDS |
| GTCAATAAGTCCGGTCGCAA+TGG | 0.494855 | 4_3:+52433657 | Msa0646640:CDS |
| GTATCAATATTGAGTATGTC+AGG | 0.496740 | 4_3:+52433831 | Msa0646640:CDS |
| TAGCGAGAGCCACAGAACTT+AGG | 0.501152 | 4_3:+52430866 | Msa0646640:CDS |
| GGAGGGCGGGTTGGATAAGG+AGG | 0.511572 | 4_3:-52433588 | None:intergenic |
| AAGACGAGGATGCTACTGAT+AGG | 0.511739 | 4_3:+52430953 | Msa0646640:CDS |
| CACACTTGATAATGTGATTG+AGG | 0.511821 | 4_3:+52433686 | Msa0646640:CDS |
| CGATCATACTTGTTATGTCA+CGG | 0.515708 | 4_3:+52434418 | Msa0646640:three_prime_UTR |
| GCAGCAATGTGACTAAGTCT+AGG | 0.515796 | 4_3:-52434464 | None:intergenic |
| CTAATTTGCAGAAGGTTCGT+TGG | 0.524180 | 4_3:+52433862 | Msa0646640:CDS |
| ACAGACTAGAAAATGAGAAT+GGG | 0.537258 | 4_3:+52433904 | Msa0646640:CDS |
| GATCTTCAACCTAAGTTCTG+TGG | 0.541601 | 4_3:-52430875 | None:intergenic |
| AGACCATTAGGAGAAGAAGT+TGG | 0.548035 | 4_3:-52430916 | None:intergenic |
| AGATCTACCACTGAAAATAA+GGG | 0.549200 | 4_3:+52433927 | Msa0646640:CDS |
| CGACCGGACTTATTGACAGA+AGG | 0.550670 | 4_3:-52433651 | None:intergenic |
| CTCGATGTCTCGTGAAAGAG+AGG | 0.553753 | 4_3:+52434000 | Msa0646640:CDS |
| ACCACTGAAAATAAGGGTGA+TGG | 0.554032 | 4_3:+52433933 | Msa0646640:CDS |
| AGACATGGAATATGGAGGGC+GGG | 0.557062 | 4_3:-52433601 | None:intergenic |
| GGTGATGGACAGTGTCCACC+TGG | 0.562228 | 4_3:+52433948 | Msa0646640:CDS |
| TCCAGCACCAAAACTCTACC+AGG | 0.564759 | 4_3:-52433966 | None:intergenic |
| ATTTGGTCCTAATTTGCAGA+AGG | 0.566190 | 4_3:+52433854 | Msa0646640:CDS |
| ATATACAATGAGGAGAACTA+AGG | 0.569170 | 4_3:-52434089 | None:intergenic |
| GAGCAAAATCATGTTGAAGA+CGG | 0.571685 | 4_3:+52433732 | Msa0646640:CDS |
| CCTGATATAAACTATGGATG+TGG | 0.573675 | 4_3:+52434056 | Msa0646640:CDS |
| GATCATACTTGTTATGTCAC+GGG | 0.574148 | 4_3:+52434419 | Msa0646640:three_prime_UTR |
| TGTGATTAATCCATTGCGAC+CGG | 0.579636 | 4_3:-52433667 | None:intergenic |
| CAGCAATGTGACTAAGTCTA+GGG | 0.580265 | 4_3:-52434463 | None:intergenic |
| AAATTAAAACATAAAATAAG+GGG | 0.580436 | 4_3:-52434128 | None:intergenic |
| AATGCTAATTAATAAGCTCA+AGG | 0.585821 | 4_3:+52433479 | Msa0646640:CDS |
| TCAAGAGACATGGAATATGG+AGG | 0.598159 | 4_3:-52433606 | None:intergenic |
| GTGTTTAATTGCGCTTATGT+GGG | 0.601070 | 4_3:+52434380 | Msa0646640:three_prime_UTR |
| GACCGGACTTATTGACAGAA+GGG | 0.606790 | 4_3:-52433650 | None:intergenic |
| GCAATTAAACACGCATATGT+GGG | 0.609420 | 4_3:-52434369 | None:intergenic |
| GAAATTCGCATGAATAAGAG+AGG | 0.610175 | 4_3:-52434496 | None:intergenic |
| ATTTAGGGATAGAACCTGCA+AGG | 0.611650 | 4_3:-52431025 | None:intergenic |
| ATATTGCTTGTCAAGAGACA+TGG | 0.613371 | 4_3:-52433616 | None:intergenic |
| ATACGAAAGAGAAATTGCCT+TGG | 0.615830 | 4_3:+52433434 | Msa0646640:CDS |
| CAAGAGACATGGAATATGGA+GGG | 0.618949 | 4_3:-52433605 | None:intergenic |
| GGAAGTAGTAGATCATTGGT+TGG | 0.626172 | 4_3:-52433567 | None:intergenic |
| TTCGTTGGAATGTACAACGC+AGG | 0.626741 | 4_3:+52433877 | Msa0646640:CDS |
| TTTGGTGCTGGAAAATGGGG+AGG | 0.629531 | 4_3:+52433977 | Msa0646640:CDS |
| CCTTGAAGACGATGAAGACG+AGG | 0.636811 | 4_3:+52430939 | Msa0646640:CDS |
| AATTAAAACATAAAATAAGG+GGG | 0.653421 | 4_3:-52434127 | None:intergenic |
| GAGACATGGAATATGGAGGG+CGG | 0.660233 | 4_3:-52433602 | None:intergenic |
| GCAAAATCATGTTGAAGACG+GGG | 0.661988 | 4_3:+52433734 | Msa0646640:CDS |
| ATTTAGGTAAGTGATGCAGA+TGG | 0.664359 | 4_3:+52434245 | Msa0646640:three_prime_UTR |
| GAGTGAAATGATATACAATG+AGG | 0.664799 | 4_3:-52434099 | None:intergenic |
| AGTGCTCACAGTTGTTGGTG+TGG | 0.679889 | 4_3:+52433809 | Msa0646640:CDS |
| AGCACCAAAACTCTACCAGG+TGG | 0.702063 | 4_3:-52433963 | None:intergenic |
| TCGATGTCTCGTGAAAGAGA+GGG | 0.703822 | 4_3:+52434001 | Msa0646640:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAAACATAAAATAAG+GGG | - | chr4_3:52434131-52434150 | None:intergenic | 10.0% |
| !!! | ACATTTAAAAAATTTCAAGT+TGG | - | chr4_3:52431635-52431654 | None:intergenic | 15.0% |
| !!! | TTGAAATTTTTTAAATGTAG+AGG | + | chr4_3:52431637-52431656 | Msa0646640:intron | 15.0% |
| !! | TGAAACTTAAAATAAATGTA+AGG | + | chr4_3:52432262-52432281 | Msa0646640:intron | 15.0% |
| !! | GAAACTTAAAATAAATGTAA+GGG | + | chr4_3:52432263-52432282 | Msa0646640:intron | 15.0% |
| !!! | TTTTTCAATTTCTTTTAAGA+TGG | + | chr4_3:52433238-52433257 | Msa0646640:intron | 15.0% |
| !! | AAAATATTCAAAACATGATT+GGG | + | chr4_3:52433351-52433370 | Msa0646640:intron | 15.0% |
| !! | AATTAAAACATAAAATAAGG+GGG | - | chr4_3:52434130-52434149 | None:intergenic | 15.0% |
| !!! | TTTTAATTCCATTTTTGTTT+TGG | + | chr4_3:52434172-52434191 | Msa0646640:three_prime_UTR | 15.0% |
| !! | ATAAGACAATGCAAATAATA+TGG | - | chr4_3:52430737-52430756 | None:intergenic | 20.0% |
| !! | GAGATAATGAATTAGATTTA+GGG | - | chr4_3:52431043-52431062 | None:intergenic | 20.0% |
| !! | TGAGATAATGAATTAGATTT+AGG | - | chr4_3:52431044-52431063 | None:intergenic | 20.0% |
| !! | AAATATAGCATCAAAACAAT+GGG | - | chr4_3:52431169-52431188 | None:intergenic | 20.0% |
| !! | TAAATATAGCATCAAAACAA+TGG | - | chr4_3:52431170-52431189 | None:intergenic | 20.0% |
| !! | ACTTACAACATTATTTAACT+CGG | - | chr4_3:52431353-52431372 | None:intergenic | 20.0% |
| !!! | AAGCTTAAAAAGTTTTAAGT+TGG | + | chr4_3:52431433-52431452 | Msa0646640:intron | 20.0% |
| !! | AGAGTTAATTCAAAATTTGA+TGG | + | chr4_3:52431571-52431590 | Msa0646640:intron | 20.0% |
| !! | ATTAAGTGTTTCATATAAAG+AGG | - | chr4_3:52431784-52431803 | None:intergenic | 20.0% |
| !!! | TTGTCTTGTACATTTATTTT+AGG | + | chr4_3:52432037-52432056 | Msa0646640:intron | 20.0% |
| !!! | ATTTATTTTAGGTTTCAAGT+TGG | + | chr4_3:52432048-52432067 | Msa0646640:intron | 20.0% |
| !! | TTCAAAATGAGTAATTGTTA+GGG | - | chr4_3:52432373-52432392 | None:intergenic | 20.0% |
| !! | TTTCAAAATGAGTAATTGTT+AGG | - | chr4_3:52432374-52432393 | None:intergenic | 20.0% |
| !!! | GTATACACAAAATCTTATTT+TGG | + | chr4_3:52432602-52432621 | Msa0646640:intron | 20.0% |
| !!! | ATATTTTATTGTTGTTGCTA+TGG | + | chr4_3:52433327-52433346 | Msa0646640:intron | 20.0% |
| !!! | TATTTTATTGTTGTTGCTAT+GGG | + | chr4_3:52433328-52433347 | Msa0646640:intron | 20.0% |
| !! | GAAAATATTCAAAACATGAT+TGG | + | chr4_3:52433350-52433369 | Msa0646640:intron | 20.0% |
| !! | TGTAAATACACACAATAATT+AGG | - | chr4_3:52433393-52433412 | None:intergenic | 20.0% |
| !! | TAATTATTGTGTGTATTTAC+AGG | + | chr4_3:52433392-52433411 | Msa0646640:intron | 20.0% |
| !!! | ATGGTCGTTTATTTTTTAAA+GGG | + | chr4_3:52434264-52434283 | Msa0646640:three_prime_UTR | 20.0% |
| ! | TATTTGCATTGTCTTATACT+TGG | + | chr4_3:52430740-52430759 | Msa0646640:five_prime_UTR | 25.0% |
| !!! | CTTTGTTTGTTGGTTTTTTT+CGG | - | chr4_3:52430772-52430791 | None:intergenic | 25.0% |
| ! | CACAAGAAAGAAAAAAACAA+TGG | + | chr4_3:52430819-52430838 | Msa0646640:exon | 25.0% |
| ! | AAAAAAACAATGGAAGAAGA+AGG | + | chr4_3:52430829-52430848 | Msa0646640:exon | 25.0% |
| ! | TTCATGAATTGCTACATAAA+AGG | - | chr4_3:52431212-52431231 | None:intergenic | 25.0% |
| ! | TCAAAATTTGATGGAATTGA+TGG | + | chr4_3:52431580-52431599 | Msa0646640:intron | 25.0% |
| ! | AGATTTGACCAATTATTATG+AGG | + | chr4_3:52431715-52431734 | Msa0646640:intron | 25.0% |
| ! | AAAAACTAGTTACGATATGT+AGG | - | chr4_3:52431997-52432016 | None:intergenic | 25.0% |
| ! | TCAAAATTTGACAGAATTGA+TGG | + | chr4_3:52432204-52432223 | Msa0646640:intron | 25.0% |
| !! | GATATATTGATTGACGATAA+AGG | - | chr4_3:52432307-52432326 | None:intergenic | 25.0% |
| ! | AATACTACTTCTAAACATGA+TGG | + | chr4_3:52432512-52432531 | Msa0646640:intron | 25.0% |
| !!! | AGGATTTTAGGATTAAAATC+AGG | - | chr4_3:52432545-52432564 | None:intergenic | 25.0% |
| !! | TTGCAAAATCATAGGATTTT+AGG | - | chr4_3:52432557-52432576 | None:intergenic | 25.0% |
| ! | AAGCATAATTGCAAAATCAT+AGG | - | chr4_3:52432565-52432584 | None:intergenic | 25.0% |
| ! | ACATGCATATAAAATACCAT+AGG | - | chr4_3:52432932-52432951 | None:intergenic | 25.0% |
| ! | AGAATTGTTACATTAATCGT+AGG | - | chr4_3:52432992-52433011 | None:intergenic | 25.0% |
| !! | ATTTTACGTTCAATTGGTAA+GGG | - | chr4_3:52433035-52433054 | None:intergenic | 25.0% |
| !! | ACTTGTTGAACACTAAATAT+AGG | + | chr4_3:52433122-52433141 | Msa0646640:intron | 25.0% |
| !! | CATTGTTTGGTTTATATTGT+TGG | + | chr4_3:52433286-52433305 | Msa0646640:intron | 25.0% |
| ! | AATGCTAATTAATAAGCTCA+AGG | + | chr4_3:52433479-52433498 | Msa0646640:CDS | 25.0% |
| !!! | TGATTTTGCTCTTTTTCATT+TGG | - | chr4_3:52433723-52433742 | None:intergenic | 25.0% |
| !!! | TAATTCCATTTTTGTTTTGG+TGG | + | chr4_3:52434175-52434194 | Msa0646640:three_prime_UTR | 25.0% |
| ! | ATGATTACTGGTCAATATTT+AGG | + | chr4_3:52434229-52434248 | Msa0646640:three_prime_UTR | 25.0% |
| !!! | GATGGTCGTTTATTTTTTAA+AGG | + | chr4_3:52434263-52434282 | Msa0646640:three_prime_UTR | 25.0% |
| ! | CTGAATAAGTCTTTGTTTGT+TGG | - | chr4_3:52430782-52430801 | None:intergenic | 30.0% |
| ! | TCAACCTAAACCTAATTTGT+TGG | + | chr4_3:52431319-52431338 | Msa0646640:intron | 30.0% |
| AAATCCAGCCTCATAATAAT+TGG | - | chr4_3:52431726-52431745 | None:intergenic | 30.0% | |
| TGTAGGAAGTTAGTTACTTA+CGG | - | chr4_3:52431980-52431999 | None:intergenic | 30.0% | |
| !!! | TATCGTAACTAGTTTTTCGA+TGG | + | chr4_3:52432000-52432019 | Msa0646640:intron | 30.0% |
| ! | TTTTCTGACGTACAATAAGT+TGG | + | chr4_3:52432079-52432098 | Msa0646640:intron | 30.0% |
| TACTGACATTAGTAACGTAA+AGG | + | chr4_3:52432232-52432251 | Msa0646640:intron | 30.0% | |
| !! | CAAAGAAAAGTGGATTATAC+AGG | - | chr4_3:52432634-52432653 | None:intergenic | 30.0% |
| AGAATCGTTTCAAAGAAAAG+TGG | - | chr4_3:52432644-52432663 | None:intergenic | 30.0% | |
| TTGAAACGATTCTACGATTA+TGG | + | chr4_3:52432651-52432670 | Msa0646640:intron | 30.0% | |
| TACATTACACTTGAAATGCT+TGG | - | chr4_3:52432893-52432912 | None:intergenic | 30.0% | |
| ! | AGCATTTCAAGTGTAATGTA+AGG | + | chr4_3:52432893-52432912 | Msa0646640:intron | 30.0% |
| !!! | AGGTTTTTTTGTCTTACCTA+TGG | + | chr4_3:52432913-52432932 | Msa0646640:intron | 30.0% |
| ! | TTTTACGTTCAATTGGTAAG+GGG | - | chr4_3:52433034-52433053 | None:intergenic | 30.0% |
| ! | GATTTTACGTTCAATTGGTA+AGG | - | chr4_3:52433036-52433055 | None:intergenic | 30.0% |
| ! | ATCAGGATTTTACGTTCAAT+TGG | - | chr4_3:52433041-52433060 | None:intergenic | 30.0% |
| CCAAAAAAGCAAAAATGACA+AGG | - | chr4_3:52433088-52433107 | None:intergenic | 30.0% | |
| !!! | CCTTGTCATTTTTGCTTTTT+TGG | + | chr4_3:52433085-52433104 | Msa0646640:intron | 30.0% |
| CAGTACATTATGTCATTGTT+TGG | + | chr4_3:52433273-52433292 | Msa0646640:intron | 30.0% | |
| ! | AATAAGCTCAAGGAGTATAA+AGG | + | chr4_3:52433489-52433508 | Msa0646640:CDS | 30.0% |
| GGAGTATAAAGGAAAAGATT+TGG | + | chr4_3:52433500-52433519 | Msa0646640:CDS | 30.0% | |
| GTATCAATATTGAGTATGTC+AGG | + | chr4_3:52433831-52433850 | Msa0646640:CDS | 30.0% | |
| ATATTGAGTATGTCAGGATT+TGG | + | chr4_3:52433837-52433856 | Msa0646640:CDS | 30.0% | |
| ACAGACTAGAAAATGAGAAT+GGG | + | chr4_3:52433904-52433923 | Msa0646640:CDS | 30.0% | |
| AGATCTACCACTGAAAATAA+GGG | + | chr4_3:52433927-52433946 | Msa0646640:CDS | 30.0% | |
| ATATACAATGAGGAGAACTA+AGG | - | chr4_3:52434092-52434111 | None:intergenic | 30.0% | |
| GAGTGAAATGATATACAATG+AGG | - | chr4_3:52434102-52434121 | None:intergenic | 30.0% | |
| ATCAACCACCAAAACAAAAA+TGG | - | chr4_3:52434183-52434202 | None:intergenic | 30.0% | |
| CATATGTGGGTAAATATCAT+AGG | - | chr4_3:52434359-52434378 | None:intergenic | 30.0% | |
| ACAATGGAAGAAGAAGGAAT+AGG | + | chr4_3:52430835-52430854 | Msa0646640:exon | 35.0% | |
| CAATGGAAGAAGAAGGAATA+GGG | + | chr4_3:52430836-52430855 | Msa0646640:exon | 35.0% | |
| !!! | TAGGAGAAGAAGTTGGTTTT+TGG | - | chr4_3:52430912-52430931 | None:intergenic | 35.0% |
| AAACCAACTTCTTCTCCTAA+TGG | + | chr4_3:52430913-52430932 | Msa0646640:CDS | 35.0% | |
| GTTATAGTAGTTCGTTCAAC+AGG | + | chr4_3:52431092-52431111 | Msa0646640:intron | 35.0% | |
| CATGAAACACTTGACAAACA+CGG | + | chr4_3:52431226-52431245 | Msa0646640:intron | 35.0% | |
| TTAGATGTATCTACGACTGT+CGG | + | chr4_3:52431271-52431290 | Msa0646640:intron | 35.0% | |
| GTCACCAACAAATTAGGTTT+AGG | - | chr4_3:52431326-52431345 | None:intergenic | 35.0% | |
| ATAAACTAGCGACAGTATGT+AGG | - | chr4_3:52431385-52431404 | None:intergenic | 35.0% | |
| ! | TACTGTCGCTAGTTTATCAA+TGG | + | chr4_3:52431388-52431407 | Msa0646640:intron | 35.0% |
| ! | TTCAGTTTAAAACGTCAACG+TGG | + | chr4_3:52431494-52431513 | Msa0646640:intron | 35.0% |
| !! | AAATTTCAAGTTGGTCCCTT+AGG | - | chr4_3:52431626-52431645 | None:intergenic | 35.0% |
| ! | ACCAGTTTGAAGCTAAAATC+TGG | + | chr4_3:52431660-52431679 | Msa0646640:intron | 35.0% |
| !!! | ACCAGATTTTAGCTTCAAAC+TGG | - | chr4_3:52431664-52431683 | None:intergenic | 35.0% |
| TTGACCAATTATTATGAGGC+TGG | + | chr4_3:52431719-52431738 | Msa0646640:intron | 35.0% | |
| !! | ACGATTTAGGTTTAGGTTGA+AGG | - | chr4_3:52431903-52431922 | None:intergenic | 35.0% |
| TCAACCTAAACCTAAATCGT+TGG | + | chr4_3:52431903-52431922 | Msa0646640:intron | 35.0% | |
| TTATTTAACTCGGAGTGGTA+CGG | - | chr4_3:52431955-52431974 | None:intergenic | 35.0% | |
| ACTTACGGCGTTATTTAACT+CGG | - | chr4_3:52431965-52431984 | None:intergenic | 35.0% | |
| GGAAAATCATATTCGTGTAG+TGG | - | chr4_3:52432452-52432471 | None:intergenic | 35.0% | |
| TGTATACCCATAATCGCTAA+GGG | - | chr4_3:52432589-52432608 | None:intergenic | 35.0% | |
| AAAATTCACAAAGCAACCGA+CGG | - | chr4_3:52433222-52433241 | None:intergenic | 35.0% | |
| ATACGAAAGAGAAATTGCCT+TGG | + | chr4_3:52433434-52433453 | Msa0646640:CDS | 35.0% | |
| TTGTCAAGAGACATGGAATA+TGG | - | chr4_3:52433612-52433631 | None:intergenic | 35.0% | |
| ATATTGCTTGTCAAGAGACA+TGG | - | chr4_3:52433619-52433638 | None:intergenic | 35.0% | |
| !! | CACACTTGATAATGTGATTG+AGG | + | chr4_3:52433686-52433705 | Msa0646640:CDS | 35.0% |
| GAGCAAAATCATGTTGAAGA+CGG | + | chr4_3:52433732-52433751 | Msa0646640:CDS | 35.0% | |
| AGCAAAATCATGTTGAAGAC+GGG | + | chr4_3:52433733-52433752 | Msa0646640:CDS | 35.0% | |
| GGGGCTAAAAATTCAAGAAA+AGG | + | chr4_3:52433753-52433772 | Msa0646640:CDS | 35.0% | |
| ! | ATTTGGTCCTAATTTGCAGA+AGG | + | chr4_3:52433854-52433873 | Msa0646640:CDS | 35.0% |
| CACAGACTAGAAAATGAGAA+TGG | + | chr4_3:52433903-52433922 | Msa0646640:CDS | 35.0% | |
| GAGATCTACCACTGAAAATA+AGG | + | chr4_3:52433926-52433945 | Msa0646640:CDS | 35.0% | |
| GCAACACCTGATATAAACTA+TGG | + | chr4_3:52434050-52434069 | Msa0646640:CDS | 35.0% | |
| CCACATCCATAGTTTATATC+AGG | - | chr4_3:52434059-52434078 | None:intergenic | 35.0% | |
| CCTGATATAAACTATGGATG+TGG | + | chr4_3:52434056-52434075 | Msa0646640:CDS | 35.0% | |
| AACATAAAATAAGGGGGCAA+AGG | - | chr4_3:52434124-52434143 | None:intergenic | 35.0% | |
| TATTGTAGTAGCTGAGTGAT+TGG | + | chr4_3:52434205-52434224 | Msa0646640:three_prime_UTR | 35.0% | |
| ATTTAGGTAAGTGATGCAGA+TGG | + | chr4_3:52434245-52434264 | Msa0646640:three_prime_UTR | 35.0% | |
| GCTCTTGACTAAAAAGCAAT+GGG | - | chr4_3:52434317-52434336 | None:intergenic | 35.0% | |
| TGCTCTTGACTAAAAAGCAA+TGG | - | chr4_3:52434318-52434337 | None:intergenic | 35.0% | |
| GCAATTAAACACGCATATGT+GGG | - | chr4_3:52434372-52434391 | None:intergenic | 35.0% | |
| GTGTTTAATTGCGCTTATGT+GGG | + | chr4_3:52434380-52434399 | Msa0646640:three_prime_UTR | 35.0% | |
| !! | CGATCATACTTGTTATGTCA+CGG | + | chr4_3:52434418-52434437 | Msa0646640:three_prime_UTR | 35.0% |
| !! | GATCATACTTGTTATGTCAC+GGG | + | chr4_3:52434419-52434438 | Msa0646640:three_prime_UTR | 35.0% |
| GAAATTCGCATGAATAAGAG+AGG | - | chr4_3:52434499-52434518 | None:intergenic | 35.0% | |
| GATCTTCAACCTAAGTTCTG+TGG | - | chr4_3:52430878-52430897 | None:intergenic | 40.0% | |
| AGACCATTAGGAGAAGAAGT+TGG | - | chr4_3:52430919-52430938 | None:intergenic | 40.0% | |
| ATTTAGGGATAGAACCTGCA+AGG | - | chr4_3:52431028-52431047 | None:intergenic | 40.0% | |
| GGACATGTCACCAACAAATT+AGG | - | chr4_3:52431332-52431351 | None:intergenic | 40.0% | |
| ATGCCAACATCAGTAACCTA+AGG | + | chr4_3:52431607-52431626 | Msa0646640:intron | 40.0% | |
| TGCCAACATCAGTAACCTAA+GGG | + | chr4_3:52431608-52431627 | Msa0646640:intron | 40.0% | |
| TGTCATGTAAGTAGCGTCAT+AGG | + | chr4_3:52431856-52431875 | Msa0646640:intron | 40.0% | |
| ! | AGCACCAACGATTTAGGTTT+AGG | - | chr4_3:52431910-52431929 | None:intergenic | 40.0% |
| CTATGTAGCACCAACGATTT+AGG | - | chr4_3:52431916-52431935 | None:intergenic | 40.0% | |
| !! | CTAAATCGTTGGTGCTACAT+AGG | + | chr4_3:52431914-52431933 | Msa0646640:intron | 40.0% |
| GTGTATACCCATAATCGCTA+AGG | - | chr4_3:52432590-52432609 | None:intergenic | 40.0% | |
| CAAGCAAGGTAGTCAAAATC+AGG | - | chr4_3:52433058-52433077 | None:intergenic | 40.0% | |
| GTGTTCAACAAGTCTCAGAT+AGG | - | chr4_3:52433115-52433134 | None:intergenic | 40.0% | |
| ATATAGGTATATCTCCCAGC+TGG | + | chr4_3:52433138-52433157 | Msa0646640:intron | 40.0% | |
| CCAATGTTCAAATTCCAGCT+GGG | - | chr4_3:52433155-52433174 | None:intergenic | 40.0% | |
| CCAGCTGGAATTTGAACATT+GGG | + | chr4_3:52433153-52433172 | Msa0646640:intron | 40.0% | |
| AAATTCACAAAGCAACCGAC+GGG | - | chr4_3:52433221-52433240 | None:intergenic | 40.0% | |
| CATGATTGGGATTGCATTTC+TGG | + | chr4_3:52433364-52433383 | Msa0646640:intron | 40.0% | |
| ! | ACTGTTTTCAATCTCAGCCA+AGG | - | chr4_3:52433454-52433473 | None:intergenic | 40.0% |
| GGAAGTAGTAGATCATTGGT+TGG | - | chr4_3:52433570-52433589 | None:intergenic | 40.0% | |
| AGGAGGAAGTAGTAGATCAT+TGG | - | chr4_3:52433574-52433593 | None:intergenic | 40.0% | |
| CAAGAGACATGGAATATGGA+GGG | - | chr4_3:52433608-52433627 | None:intergenic | 40.0% | |
| TCAAGAGACATGGAATATGG+AGG | - | chr4_3:52433609-52433628 | None:intergenic | 40.0% | |
| ATCCCTTCTGTCAATAAGTC+CGG | + | chr4_3:52433648-52433667 | Msa0646640:CDS | 40.0% | |
| TGTGATTAATCCATTGCGAC+CGG | - | chr4_3:52433670-52433689 | None:intergenic | 40.0% | |
| GCAAAATCATGTTGAAGACG+GGG | + | chr4_3:52433734-52433753 | Msa0646640:CDS | 40.0% | |
| CAACGAACCTTCTGCAAATT+AGG | - | chr4_3:52433864-52433883 | None:intergenic | 40.0% | |
| ! | CTAATTTGCAGAAGGTTCGT+TGG | + | chr4_3:52433862-52433881 | Msa0646640:CDS | 40.0% |
| ACCACTGAAAATAAGGGTGA+TGG | + | chr4_3:52433933-52433952 | Msa0646640:CDS | 40.0% | |
| !!! | TCCATCACCCTTATTTTCAG+TGG | - | chr4_3:52433937-52433956 | None:intergenic | 40.0% |
| !!! | AGAGTTTTGGTGCTGGAAAA+TGG | + | chr4_3:52433972-52433991 | Msa0646640:CDS | 40.0% |
| !!! | GAGTTTTGGTGCTGGAAAAT+GGG | + | chr4_3:52433973-52433992 | Msa0646640:CDS | 40.0% |
| !!! | AGTTTTGGTGCTGGAAAATG+GGG | + | chr4_3:52433974-52433993 | Msa0646640:CDS | 40.0% |
| TGAGTGATTGGCATGATTAC+TGG | + | chr4_3:52434217-52434236 | Msa0646640:three_prime_UTR | 40.0% | |
| CGCAATTAAACACGCATATG+TGG | - | chr4_3:52434373-52434392 | None:intergenic | 40.0% | |
| CGTGTTTAATTGCGCTTATG+TGG | + | chr4_3:52434379-52434398 | Msa0646640:three_prime_UTR | 40.0% | |
| CAGCAATGTGACTAAGTCTA+GGG | - | chr4_3:52434466-52434485 | None:intergenic | 40.0% | |
| TCGTCTTCAAGGAGACCATT+AGG | - | chr4_3:52430931-52430950 | None:intergenic | 45.0% | |
| AAGACGAGGATGCTACTGAT+AGG | + | chr4_3:52430953-52430972 | Msa0646640:CDS | 45.0% | |
| TAGTTCGTTCAACAGGAACG+TGG | + | chr4_3:52431099-52431118 | Msa0646640:intron | 45.0% | |
| AGTTCGTTCAACAGGAACGT+GGG | + | chr4_3:52431100-52431119 | Msa0646640:intron | 45.0% | |
| GACGCACACATGGATAACTT+CGG | + | chr4_3:52431525-52431544 | Msa0646640:intron | 45.0% | |
| ACTCTGTCTAAACATCCACG+TGG | - | chr4_3:52431556-52431575 | None:intergenic | 45.0% | |
| GTCCCTTAGGTTACTGATGT+TGG | - | chr4_3:52431613-52431632 | None:intergenic | 45.0% | |
| !! | TCATAGGAGTGTCGAACACT+TGG | + | chr4_3:52431872-52431891 | Msa0646640:intron | 45.0% |
| ! | TTCCGTTTGAAATGTCCACG+TGG | + | chr4_3:52432117-52432136 | Msa0646640:intron | 45.0% |
| AGCCACGTGGACATTTCAAA+CGG | - | chr4_3:52432122-52432141 | None:intergenic | 45.0% | |
| GACACACACGTGGATAACTT+CGG | + | chr4_3:52432148-52432167 | Msa0646640:intron | 45.0% | |
| ACTATGTCTAAACGTCCACG+TGG | - | chr4_3:52432179-52432198 | None:intergenic | 45.0% | |
| CCTTCTACTGATAGCAGAGA+TGG | - | chr4_3:52432473-52432492 | None:intergenic | 45.0% | |
| CCATCTCTGCTATCAGTAGA+AGG | + | chr4_3:52432470-52432489 | Msa0646640:intron | 45.0% | |
| ATGCTTGCCCTTAGCGATTA+TGG | + | chr4_3:52432579-52432598 | Msa0646640:intron | 45.0% | |
| TGCTTGCCCTTAGCGATTAT+GGG | + | chr4_3:52432580-52432599 | Msa0646640:intron | 45.0% | |
| CGATTCTACGATTATGGTCG+CGG | + | chr4_3:52432657-52432676 | Msa0646640:intron | 45.0% | |
| ! | GACAAGGCATCTTACAAGCA+AGG | - | chr4_3:52433072-52433091 | None:intergenic | 45.0% |
| CCCAGCTGGAATTTGAACAT+TGG | + | chr4_3:52433152-52433171 | Msa0646640:intron | 45.0% | |
| CCCAATGTTCAAATTCCAGC+TGG | - | chr4_3:52433156-52433175 | None:intergenic | 45.0% | |
| CACTGTTTCACTGGCAAAAG+TGG | - | chr4_3:52433544-52433563 | None:intergenic | 45.0% | |
| ! | CACTTTTGCCAGTGAAACAG+TGG | + | chr4_3:52433542-52433561 | Msa0646640:CDS | 45.0% |
| GACCGGACTTATTGACAGAA+GGG | - | chr4_3:52433653-52433672 | None:intergenic | 45.0% | |
| AAAGCAGTGCTCACAGTTGT+TGG | + | chr4_3:52433804-52433823 | Msa0646640:CDS | 45.0% | |
| TTCGTTGGAATGTACAACGC+AGG | + | chr4_3:52433877-52433896 | Msa0646640:CDS | 45.0% | |
| TCGATGTCTCGTGAAAGAGA+GGG | + | chr4_3:52434001-52434020 | Msa0646640:CDS | 45.0% | |
| GTTGCAGCAACAGCTGAAAA+TGG | - | chr4_3:52434035-52434054 | None:intergenic | 45.0% | |
| GCGCTTATGTGGGATTATAC+TGG | + | chr4_3:52434390-52434409 | Msa0646640:three_prime_UTR | 45.0% | |
| GCAGCAATGTGACTAAGTCT+AGG | - | chr4_3:52434467-52434486 | None:intergenic | 45.0% | |
| !! | AAAATTAAAACATAAAATAA+GGG | - | chr4_3:52434132-52434151 | None:intergenic | 5.0% |
| !! | AAAAATTAAAACATAAAATA+AGG | - | chr4_3:52434133-52434152 | None:intergenic | 5.0% |
| TAGCGAGAGCCACAGAACTT+AGG | + | chr4_3:52430866-52430885 | Msa0646640:CDS | 50.0% | |
| CCTCGTCTTCATCGTCTTCA+AGG | - | chr4_3:52430942-52430961 | None:intergenic | 50.0% | |
| CCTTGAAGACGATGAAGACG+AGG | + | chr4_3:52430939-52430958 | Msa0646640:CDS | 50.0% | |
| TTGCGATGCACTCGAAGCTT+TGG | + | chr4_3:52430987-52431006 | Msa0646640:CDS | 50.0% | |
| GACTCAGCTTTCTTCCTTGC+AGG | + | chr4_3:52431011-52431030 | Msa0646640:CDS | 50.0% | |
| !! | TGTCGGTGTCATGCAAGTGT+TGG | + | chr4_3:52431288-52431307 | Msa0646640:intron | 50.0% |
| GCACACATGGATAACTTCGG+AGG | + | chr4_3:52431528-52431547 | Msa0646640:intron | 50.0% | |
| CGGCGTTATTTAACTCGGAG+TGG | - | chr4_3:52431960-52431979 | None:intergenic | 50.0% | |
| ACACACGTGGATAACTTCGG+AGG | + | chr4_3:52432151-52432170 | Msa0646640:intron | 50.0% | |
| CGTGTAGTGGCAAACACTGA+AGG | - | chr4_3:52432439-52432458 | None:intergenic | 50.0% | |
| TTCTACGATTATGGTCGCGG+TGG | + | chr4_3:52432660-52432679 | Msa0646640:intron | 50.0% | |
| TTGAACATTGGGTCGCCAAG+TGG | + | chr4_3:52433164-52433183 | Msa0646640:intron | 50.0% | |
| TGAACATTGGGTCGCCAAGT+GGG | + | chr4_3:52433165-52433184 | Msa0646640:intron | 50.0% | |
| AGACATGGAATATGGAGGGC+GGG | - | chr4_3:52433604-52433623 | None:intergenic | 50.0% | |
| GAGACATGGAATATGGAGGG+CGG | - | chr4_3:52433605-52433624 | None:intergenic | 50.0% | |
| CGACCGGACTTATTGACAGA+AGG | - | chr4_3:52433654-52433673 | None:intergenic | 50.0% | |
| GTCAATAAGTCCGGTCGCAA+TGG | + | chr4_3:52433657-52433676 | Msa0646640:CDS | 50.0% | |
| AGTGCTCACAGTTGTTGGTG+TGG | + | chr4_3:52433809-52433828 | Msa0646640:CDS | 50.0% | |
| ! | GTGTCCACCTGGTAGAGTTT+TGG | + | chr4_3:52433959-52433978 | Msa0646640:CDS | 50.0% |
| AGCACCAAAACTCTACCAGG+TGG | - | chr4_3:52433966-52433985 | None:intergenic | 50.0% | |
| !! | ACCTGGTAGAGTTTTGGTGC+TGG | + | chr4_3:52433965-52433984 | Msa0646640:CDS | 50.0% |
| TCCAGCACCAAAACTCTACC+AGG | - | chr4_3:52433969-52433988 | None:intergenic | 50.0% | |
| !! | TTTGGTGCTGGAAAATGGGG+AGG | + | chr4_3:52433977-52433996 | Msa0646640:CDS | 50.0% |
| CTCGATGTCTCGTGAAAGAG+AGG | + | chr4_3:52434000-52434019 | Msa0646640:CDS | 50.0% | |
| GGCTAACAGAGACGCACACA+TGG | + | chr4_3:52431515-52431534 | Msa0646640:intron | 55.0% | |
| !! | ATAACTTCGGAGGTGCCACG+TGG | + | chr4_3:52431538-52431557 | Msa0646640:intron | 55.0% |
| GTGTGTCTCTGTTAGCCACG+TGG | - | chr4_3:52432135-52432154 | None:intergenic | 55.0% | |
| GGCTAACAGAGACACACACG+TGG | + | chr4_3:52432138-52432157 | Msa0646640:intron | 55.0% | |
| !! | ATAACTTCGGAGGTGCCACG+TGG | + | chr4_3:52431538-52431557 | Msa0646640:intron | 55.0% |
| TACGATTATGGTCGCGGTGG+TGG | + | chr4_3:52432663-52432682 | Msa0646640:intron | 55.0% | |
| !! | CGCGGTGGTGGAACTACAAA+AGG | + | chr4_3:52432675-52432694 | Msa0646640:intron | 55.0% |
| GAAGGGGCTAGATTCCCACT+TGG | - | chr4_3:52433182-52433201 | None:intergenic | 55.0% | |
| TCACAAAGCAACCGACGGGT+GGG | - | chr4_3:52433217-52433236 | None:intergenic | 55.0% | |
| TTCACAAAGCAACCGACGGG+TGG | - | chr4_3:52433218-52433237 | None:intergenic | 55.0% | |
| ! | GGTTGGCTCCACTGTTTCAC+TGG | - | chr4_3:52433553-52433572 | None:intergenic | 55.0% |
| !! | TATGGAGGGCGGGTTGGATA+AGG | - | chr4_3:52433594-52433613 | None:intergenic | 55.0% |
| ATGGAATATGGAGGGCGGGT+TGG | - | chr4_3:52433600-52433619 | None:intergenic | 55.0% | |
| TGGGACGGGTCTAGCAGAAG+GGG | - | chr4_3:52433198-52433217 | None:intergenic | 60.0% | |
| GTGGGACGGGTCTAGCAGAA+GGG | - | chr4_3:52433199-52433218 | None:intergenic | 60.0% | |
| AAAGCAACCGACGGGTGGGA+CGG | - | chr4_3:52433213-52433232 | None:intergenic | 60.0% | |
| !! | GGTGATGGACAGTGTCCACC+TGG | + | chr4_3:52433948-52433967 | Msa0646640:CDS | 60.0% |
| GGTGGGACGGGTCTAGCAGA+AGG | - | chr4_3:52433200-52433219 | None:intergenic | 65.0% | |
| AAGCAACCGACGGGTGGGAC+GGG | - | chr4_3:52433212-52433231 | None:intergenic | 65.0% | |
| !! | GGAGGGCGGGTTGGATAAGG+AGG | - | chr4_3:52433591-52433610 | None:intergenic | 65.0% |
| GCTAGACCCGTCCCACCCGT+CGG | + | chr4_3:52433203-52433222 | Msa0646640:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 52430718 | 52434559 | 52430718 | ID=Msa0646640;Name=Msa0646640 |
| chr4_3 | mRNA | 52430718 | 52434559 | 52430718 | ID=Msa0646640-mRNA-1;Parent=Msa0646640;Name=Msa0646640-mRNA-1;_AED=0.03;_eAED=0.03;_QI=120|1|1|1|1|1|2|477|287 |
| chr4_3 | exon | 52430718 | 52431032 | 52430718 | ID=Msa0646640-mRNA-1:exon:12853;Parent=Msa0646640-mRNA-1 |
| chr4_3 | exon | 52433414 | 52434559 | 52433414 | ID=Msa0646640-mRNA-1:exon:12854;Parent=Msa0646640-mRNA-1 |
| chr4_3 | five_prime_UTR | 52430718 | 52430837 | 52430718 | ID=Msa0646640-mRNA-1:five_prime_utr;Parent=Msa0646640-mRNA-1 |
| chr4_3 | CDS | 52430838 | 52431032 | 52430838 | ID=Msa0646640-mRNA-1:cds;Parent=Msa0646640-mRNA-1 |
| chr4_3 | CDS | 52433414 | 52434082 | 52433414 | ID=Msa0646640-mRNA-1:cds;Parent=Msa0646640-mRNA-1 |
| chr4_3 | three_prime_UTR | 52434083 | 52434559 | 52434083 | ID=Msa0646640-mRNA-1:three_prime_utr;Parent=Msa0646640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
